Pregenerated sensors for CSRP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000175183Ensembl transcript IDs: ENST00000547557.1, ENST00000548783.1, ENST00000552330.5
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTTGTAATGTGCCAGAAACTGTGCTAGGTGCCAGACCACATAAGTaGCACCCAGCACTCAGTGAGGTGGGGGAGGCAGATGTGTTAACA | + |
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Preference number: 5 (lower is better) Translates to: PCNVPETVLGARPHK*HPALSEVGEADVLT Trigger: TGTTAACACATCTGCCTCCCCCACCTCACTGAGTGCTGGGTGTCACTTATGTGGTCTGGCACCTAGCACAGTTTCTGGCACATTACAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547557.1 |
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| CDS CCA 90 bp | ACACATGGCCTACAAATGGTGAAGGCTGAGGCTCCCTCACATTCCTaGTTTATCCTGTGGCTTCCCAAAAGCCATGAGACAGCATCTGGA | + |
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Preference number: 5 (lower is better) Translates to: THGLQMVKAEAPSHS*FILWLPKSHETASG Trigger: TCCAGATGCTGTCTCATGGCTTTTGGGAAGCCACAGGATAAACCAGGAATGTGAGGGAGCCTCAGCCTTCACCATTTGTAGGCCATGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS TCA 90 bp | TTTTCCTTAGAACAATGGTGGCACAGACACATGGCCTACAAATGGTaGAGGCTGAGGCTCCCTCACATTCCTGGTTTATCCTGTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: FSLEQWWHRHMAYKW*RLRLPHIPGLSCGF Trigger: GAAGCCACAGGATAAACCAGGAATGTGAGGGAGCCTCAGCCTTCACCATTTGTAGGCCATGTGTCTGTGCCACCATTGTTCTAAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CCA 90 bp | AAAGAGAAAGCTGGGGTGGATGAGGAGCAATCATTTACTCAAAAATaGGAGCTAAGCCCTTGTAATGTGCCAGAAACTGTGCTAGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: KEKAGVDEEQSFTQK*ELSPCNVPETVLGA Trigger: GGCACCTAGCACAGTTTCTGGCACATTACAAGGGCTTAGCTCCCATTTTTGAGTAAATGATTGCTCCTCATCCACCCCAGCTTTCTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547557.1 |
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| CDS CCA 90 bp | GGTTTATCCTGTGGCTTCCCAAAAGCCATGAGACAGCATCTGGACTaGCCAGCTACATTCGAGGATTATTTACATTCCTCCATGGATATG | + |
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Preference number: 5 (lower is better) Translates to: GLSCGFPKAMRQHLD*PATFEDYLHSSMDM Trigger: CATATCCATGGAGGAATGTAAATAATCCTCGAATGTAGCTGGCCAGTCCAGATGCTGTCTCATGGCTTTTGGGAAGCCACAGGATAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS TCA 90 bp | TGCATTTGTTTTCCCTTCTGTCCCAAAGGAGAATGCATTCTTTCTTaGTGGATCTCTTGCCACAGGACATTTCCACGTGTCCCACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: CICFPFCPKGECILS*WISCHRTFPRVPLH Trigger: ATGAAGTGGGACACGTGGAAATGTCCTGTGGCAAGAGATCCATCAAGAAAGAATGCATTCTCCTTTGGGACAGAAGGGAAAACAAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CCA 90 bp | GGATTACACGAGTTAACATATGCTAATGCTGCACGGTGGCTGGCATaGTTTATGGTCTTGTCCAAAGGCCATTTTGTTGGACTATTACAC | + |
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Preference number: 5 (lower is better) Translates to: GLHELTYANAARWLA*FMVLSKGHFVGLLH Trigger: GTGTAATAGTCCAACAAAATGGCCTTTGGACAAGACCATAAACCATGCCAGCCACCGTGCAGCATTAGCATATGTTAACTCGTGTAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS GCA 90 bp | AGCTACATTCGAGGATTATTTACATTCCTCCATGGATATGACAGTTaGTTCAGAAATGTATCAGAATATAACATCCAGAAGCCTCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: SYIRGLFTFLHGYDS*FRNVSEYNIQKPQA Trigger: AGCTTGAGGCTTCTGGATGTTATATTCTGATACATTTCTGAAGCAACTGTCATATCCATGGAGGAATGTAAATAATCCTCGAATGTAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CCA 72 bp | AAGGCTGAGGCTCCCTCACATTCCTGGTTTATCCTGTaGCTTCCCAAAAGCCATGAGACAGCATCTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: KAEAPSHSWFIL*LPKSHETASGL Trigger: CAGTCCAGATGCTGTCTCATGGCTTTTGGGAAGCCACAGGATAAACCAGGAATGTGAGGGAGCCTCAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS GCA 72 bp | AATCACAACCTAATACAGAACAGAAGGGAAGCTCAGTaGCTTCGGGGACTTGCCTCTGTAGCCTTTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: NHNLIQNRREAQ*LRGLASVAFPP Trigger: GGGAGGAAAGGCTACAGAGGCAAGTCCCCGAAGGCACTGAGCTTCCCTTCTGTTCTGTATTAGGTTGTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CCA 72 bp | AGCTCTGTACATACAAATTCCGTCAAAGGTGGAGCATaGAGAGCTACTTACTGCAGAGAAAGCAGCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SSVHTNSVKGGA*RATYCRESSSG Trigger: ACCGCTGCTGCTTTCTCTGCAGTAAGTAGCTCTCCATGCTCCACCTTTGACGGAATTTGTATGTACAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547557.1 |
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| CDS CCA 72 bp | TGTGGCTTCCCAAAAGCCATGAGACAGCATCTGGACTaGCCAGCTACATTCGAGGATTATTTACATTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CGFPKAMRQHLD*PATFEDYLHSS Trigger: GGAGGAATGTAAATAATCCTCGAATGTAGCTGGCCAGTCCAGATGCTGTCTCATGGCTTTTGGGAAGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CCA 72 bp | GCTGGGGTGGATGAGGAGCAATCATTTACTCAAAAATaGGAGCTAAGCCCTTGTAATGTGCCAGAAACTGTG | + |
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Preference number: 6 (lower is better) Translates to: AGVDEEQSFTQK*ELSPCNVPETV Trigger: CACAGTTTCTGGCACATTACAAGGGCTTAGCTCCCATTTTTGAGTAAATGATTGCTCCTCATCCACCCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547557.1 |
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| CDS CCA 72 bp | GGATTACACGAGTTAACATATGCTAATGCTGCACGGTaGCTGGCATGGTTTATGGTCTTGTCCAAAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GLHELTYANAAR*LAWFMVLSKGH Trigger: ATGGCCTTTGGACAAGACCATAAACCATGCCAGCCACCGTGCAGCATTAGCATATGTTAACTCGTGTAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CAA 72 bp | GCTAATGCTGCACGGTGGCTGGCATGGTTTATGGTCTaGTCCAAAGGCCATTTTGTTGGACTATTACACCAA | + |
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Preference number: 6 (lower is better) Translates to: ANAARWLAWFMV*SKGHFVGLLHQ Trigger: TTGGTGTAATAGTCCAACAAAATGGCCTTTGGACAAGACCATAAACCATGCCAGCCACCGTGCAGCATTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CAA 90 bp | CTGCATTTGTTTTCCCTTCTGTCCCAAAGGAGAATGCATTCTTTCTaGATGGATCTCTTGCCACAGGACATTTCCACGTGTCCCACTTCA | + |
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Preference number: 6 (lower is better) Translates to: LHLFSLLSQRRMHSF*MDLLPQDISTCPTS Trigger: TGAAGTGGGACACGTGGAAATGTCCTGTGGCAAGAGATCCATCAAGAAAGAATGCATTCTCCTTTGGGACAGAAGGGAAAACAAATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS TCA 72 bp | TTTCCCTTCTGTCCCAAAGGAGAATGCATTCTTTCTTaGTGGATCTCTTGCCACAGGACATTTCCACGTGTC | + |
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Preference number: 6 (lower is better) Translates to: FPFCPKGECILS*WISCHRTFPRV Trigger: GACACGTGGAAATGTCCTGTGGCAAGAGATCCATCAAGAAAGAATGCATTCTCCTTTGGGACAGAAGGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CCA 72 bp | CATATGCTAATGCTGCACGGTGGCTGGCATGGTTTATaGTCTTGTCCAAAGGCCATTTTGTTGGACTATTAC | + |
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Preference number: 6 (lower is better) Translates to: HMLMLHGGWHGL*SCPKAILLDYY Trigger: GTAATAGTCCAACAAAATGGCCTTTGGACAAGACCATAAACCATGCCAGCCACCGTGCAGCATTAGCATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CCA 72 bp | ATATTGAAGCTCTGTACATACAAATTCCGTCAAAGGTaGAGCATGGAGAGCTACTTACTGCAGAGAAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ILKLCTYKFRQR*SMESYLLQRKQ Trigger: CTGCTTTCTCTGCAGTAAGTAGCTCTCCATGCTCCACCTTTGACGGAATTTGTATGTACAGAGCTTCAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547557.1 |
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| CDS CAA 90 bp | ATCCGGTCTCCAAGGTGCTGTGAAATTGAAGTAAATACAAATCACTaGCTTTTGAGAACACGACTCCTTGATACAGCTTGGAATGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: IRSPRCCEIEVNTNH*LLRTRLLDTAWNAL Trigger: GAGAGCATTCCAAGCTGTATCAAGGAGTCGTGTTCTCAAAAGCAAGTGATTTGTATTTACTTCAATTTCACAGCACCTTGGAGACCGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552330.5 |
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| CDS CAA 90 bp | CTGCACGGTGGCTGGCATGGTTTATGGTCTTGTCCAAAGGCCATTTaGTTGGACTATTACACCAATTTTGGACTTCTCAATATAAAATGG | + |
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Preference number: 6 (lower is better) Translates to: LHGGWHGLWSCPKAI*LDYYTNFGLLNIKW Trigger: CCATTTTATATTGAGAAGTCCAAAATTGGTGTAATAGTCCAACAAAATGGCCTTTGGACAAGACCATAAACCATGCCAGCCACCGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CAA 90 bp | TTAACATATGCTAATGCTGCACGGTGGCTGGCATGGTTTATGGTCTaGTCCAAAGGCCATTTTGTTGGACTATTACACCAATTTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: LTYANAARWLAWFMV*SKGHFVGLLHQFWT Trigger: AGTCCAAAATTGGTGTAATAGTCCAACAAAATGGCCTTTGGACAAGACCATAAACCATGCCAGCCACCGTGCAGCATTAGCATATGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS TCA 72 bp | AAGAAAGAGAGGAAGCCCTATGTTGTAGGACTGTTGTaGGGATTACACGAGTTAACATATGCTAATGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KKERKPYVVGLL*GLHELTYANAA Trigger: TGCAGCATTAGCATATGTTAACTCGTGTAATCCTCACAACAGTCCTACAACATAGGGCTTCCTCTCTTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CCA 72 bp | CACTTGCTTTTGAGAACACGACTCCTTGATACAGCTTaGAATGCTATAAAGCCAGAAGTAGAAATCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: HLLLRTRLLDTA*NAIKPEVEITG Trigger: TCCAGTGATTTCTACTTCTGGCTTTATAGCATTCCAAGCTGTATCAAGGAGTCGTGTTCTCAAAAGCAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CCA 72 bp | AATTTTAACAAAGATAAAAAGGTAAGCTGGGCATCATaGCCCAGAAACTCTGAGGGTGGAAGAAGCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: NFNKDKKVSWAS*PRNSEGGRSSK Trigger: CTTTGAGCTTCTTCCACCCTCAGAGTTTCTGGGCCATGATGCCCAGCTTACCTTTTTATCTTTGTTAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CAA 72 bp | GGCTGGCATGGTTTATGGTCTTGTCCAAAGGCCATTTaGTTGGACTATTACACCAATTTTGGACTTCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: GWHGLWSCPKAI*LDYYTNFGLLN Trigger: ATTGAGAAGTCCAAAATTGGTGTAATAGTCCAACAAAATGGCCTTTGGACAAGACCATAAACCATGCCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CAA 90 bp | ATCCGGTCTCCAAGGTGCTGTGAAATTGAAGTAAATACAAATCACTaGCTTTTGAGAACACGACTCCTTGATACAGCTTGGAATGCTATA | + |
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Preference number: 6 (lower is better) Translates to: IRSPRCCEIEVNTNH*LLRTRLLDTAWNAI Trigger: TATAGCATTCCAAGCTGTATCAAGGAGTCGTGTTCTCAAAAGCAAGTGATTTGTATTTACTTCAATTTCACAGCACCTTGGAGACCGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CAA 72 bp | CCAAGGTGCTGTGAAATTGAAGTAAATACAAATCACTaGCTTTTGAGAACACGACTCCTTGATACAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PRCCEIEVNTNH*LLRTRLLDTAW Trigger: CCAAGCTGTATCAAGGAGTCGTGTTCTCAAAAGCAAGTGATTTGTATTTACTTCAATTTCACAGCACCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548783.1 ENST00000552330.5 |
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| CDS CAA 72 bp | TGCTTTAAAACTATGGCCATAGTCACTGACTTACTTTaGGGGTCATGGATAAATCTGGTTTGGATTGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CFKTMAIVTDLL*GSWINLVWIEG Trigger: TCCCTCAATCCAAACCAGATTTATCCATGACCCCAAAAGTAAGTCAGTGACTATGGCCATAGTTTTAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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| CDS CAA 72 bp | TGGCATGGTTTATGGTCTTGTCCAAAGGCCATTTTGTaGGACTATTACACCAATTTTGGACTTCTCAATATA | + |
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Preference number: 6 (lower is better) Translates to: WHGLWSCPKAIL*DYYTNFGLLNI Trigger: TATATTGAGAAGTCCAAAATTGGTGTAATAGTCCAACAAAATGGCCTTTGGACAAGACCATAAACCATGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548783.1 |
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