RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSRNP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144655

Ensembl transcript IDs: ENST00000273153.10, ENST00000514182.1

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAACTGGCCTCAGGGCATGGGCAGGTGGGCCACGCTGAAGTGCAGTaGCCAGAAAGCCCTGAGATAATAGTCTGGGGCATGGTTCGCGCC +
Preference number: 1 (lower is better)
Translates to: QLASGHGQVGHAEVQ*PESPEIIVWGMVRA
Trigger: GGCGCGAACCATGCCCCAGACTATTATCTCAGGGCTTTCTGGGCACTGCACTTCAGCGTGGCCCACCTGCCCATGCCCTGAGGCCAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
3UTR CCA 90 bp CAGGTACAAGGTGTTCCCACAAGCACACAGGCTGGCAAGGCCTCCTaGGCAAGGGGCAGGCCCAGAGCCTGCGTTTCTTGGCACAGACAC +
Preference number: 1 (lower is better)
Translates to: QVQGVPTSTQAGKAS*ARGRPRACVSWHRH
Trigger: GTGTCTGTGCCAAGAAACGCAGGCTCTGGGCCTGCCCCTTGCCCAGGAGGCCTTGCCAGCCTGTGTGCTTGTGGGAACACCTTGTACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
3UTR CCA 90 bp GCAAACAAAGGGTATAAAAACCCTCAGGAGCCACCCCTCGCCAACTaGCCTCAGGGCATGGGCAGGTGGGCCACGCTGAAGTGCAGTGCC +
Preference number: 1 (lower is better)
Translates to: ANKGYKNPQEPPLAN*PQGMGRWATLKCSA
Trigger: GGCACTGCACTTCAGCGTGGCCCACCTGCCCATGCCCTGAGGCCAGTTGGCGAGGGGTGGCTCCTGAGGGTTTTTATACCCTTTGTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273153.10
3UTR GCA 90 bp CCAGGCAGCAGACATAGATCACAGAGCTCAAATCCACACCTAGTCTaGACCAAAGCCCAGGCAGGGCAAGGTGTAGGACTACAAGGCAAA +
Preference number: 1 (lower is better)
Translates to: PGSRHRSQSSNPHLV*TKAQAGQGVGLQGK
Trigger: TTTGCCTTGTAGTCCTACACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCTATGTCTGCTGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR CCA 90 bp TCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTaGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGG +
Preference number: 1 (lower is better)
Translates to: SHRLWAKEHHAKTEK*SAKLQRSHIFSSSR
Trigger: CCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR CCA 90 bp TCAGGGCATGGGCAGGTGGGCCACGCTGAAGTGCAGTGCCCAGAAAGCCCTGAGTGCACATGGCACCTGTaGGTGAGCCAGCCAGTGGGA +
Preference number: 2 (lower is better)
Translates to: SGHGQVGHAEVQCPESPECTWHL*VSQPVG
Trigger: TCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCA...CTCAGGGCTTTCTGGGCACTGCACTTCAGCGTGGCCCACCTGCCCATGCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273153.10
3UTR-3UTR TCA 90 bp ACCCCACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCACATGGCACCTGTGGGTaGGCCAGCCAGTGGGAGACT +
Preference number: 2 (lower is better)
Translates to: TPPLALPTSQRSATKASSHGTCG*ASQWET
Trigger: AGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATG...TGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR GCA 90 bp AGATCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGCTCTTGAGGGCCTGTaGCCACCCCACCCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: RSQSSNPHLVCTKAQAGQALEGL*PPHPWH
Trigger: ATGCCAGGGGTGGGGTGGGCACAGGCCCTCAAGAGC...TTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR TCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCCATGGCACCTGTGGGTaGGCCAGCCAGTGGGAGACT +
Preference number: 2 (lower is better)
Translates to: LRNITQRPKSGLPSSRGAHGTCG*ASQWET
Trigger: AGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATG...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR CCA 90 bp ACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCAGCAAGCTGTGGGTGTaGGGGGCCGGGCAGCTGAAA +
Preference number: 2 (lower is better)
Translates to: TPGITHQPKKCNQSLLNLSKLWV*GAGQLK
Trigger: TTTCAGCTGCCCGGCCCCCCACACCCACAGCTTGCT...GAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR CCA 90 bp GGCAAGGGGCAGGCCCAGAGCCTGCGTTTCTTGGCACAGACACAGAGAGAAATGCCCCTCCTACATCCCTaGGCCTGGAATAAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: GKGQAQSLRFLAQTQREMPLLHP*AWNKGC
Trigger: ACAGCCTTTATTCCAGGCCCAGGGATGTAGGAGGGG...CATTTCTCTCTGTGTCTGTGCCAAGAAACGCAGGCTCTGGGCCTGCCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273153.10
3UTR-3UTR CCA 90 bp AGTGTGCACATGGCACCTGTGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACAGCAACAGGTCTCTTaGGGCTGGGAAAAGACATCC +
Preference number: 2 (lower is better)
Translates to: SVHMAPVGEPASGRLLRRQQQVS*GWEKTS
Trigger: GGATGTCTTTTCCCAGCCCCAAGAGACCTGTTGCTG...TCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR CCA 90 bp ACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTAGCAAGCTGTGGGTGTaGGGGGCCGGGCAGCTGAAA +
Preference number: 2 (lower is better)
Translates to: TQRPKSGLPSSRGATFSPSKLWV*GAGQLK
Trigger: TTTCAGCTGCCCGGCCCCCCACACCCACAGCTTGCT...AGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR GCA 90 bp TCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTGACCGAAAAGTGGTCTaGCAAGCTCCAGAGGAGCCA +
Preference number: 2 (lower is better)
Translates to: SQSSNPHLVCTKAQAGQGDRKVV*QAPEEP
Trigger: TGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC...ACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR CCA 90 bp ACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTGTCAGCAACAGGTCTCTTaGGGCTGGGAAAAGACATCC +
Preference number: 2 (lower is better)
Translates to: TELKSTPSLHQSPGRARCQQQVS*GWEKTS
Trigger: GGATGTCTTTTCCCAGCCCCAAGAGACCTGTTGCTG...ACACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR TCA 90 bp GGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAATAGTGGCAGAAGCCACCTaGTTTCAGCCCTGTCTCACC +
Preference number: 2 (lower is better)
Translates to: GITHQPKKCNQSLLNLQIVAEAT*FQPCLT
Trigger: GGTGAGACAGGGCTGAAATCAGGTGGCTTCTGCCAC...TATTTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR CCA 90 bp TTTCAGCCCTGTCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAACAGGTCTCTTGGGGCTaGGAAAAGACATCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: FQPCLTVFGLRNITQRPKQVSWG*EKTSWS
Trigger: GGACCAGGATGTCTTTTCCCAGCCCCAAGAGACCTG...TTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR GCA 90 bp GGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAATAGACCGAAAAGTGGTCTaGCAAGCTCCAGAGGAGCCA +
Preference number: 2 (lower is better)
Translates to: GITHQPKKCNQSLLNLQIDRKVV*QAPEEP
Trigger: TGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC...TATTTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR CCA 90 bp GGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAATACAGGTCTCTTGGGGCTaGGAAAAGACATCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: GITHQPKKCNQSLLNLQIQVSWG*EKTSWS
Trigger: GGACCAGGATGTCTTTTCCCAGCCCCAAGAGACCTG...TATTTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR-3UTR TCA 90 bp AGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAATCCAGAGAATTGTTTaGAAACCAGGAGTGTGCACA +
Preference number: 2 (lower is better)
Translates to: RPKSGLPSSRGATFSPLPIQRIV*KPGVCT
Trigger: TGTGCACACTCCTGGTTTTCAAACAATTCTCTGGAT...TGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR CCA 72 bp GGGTATAAAAACCCTCAGGAGCCACCCCTCGCCAACTaGCCTCAGGGCATGGGCAGGTGGGCCACGCTGAAG +
Preference number: 3 (lower is better)
Translates to: GYKNPQEPPLAN*PQGMGRWATLK
Trigger: CTTCAGCGTGGCCCACCTGCCCATGCCCTGAGGCCAGTTGGCGAGGGGTGGCTCCTGAGGGTTTTTATACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273153.10
3UTR GCA 72 bp TCAGGGCATGGGCAGGTGGGCCACGCTGAAGTGCAGTaGCCAGAAAGCCCTGAGATAATAGTCTGGGGCATG +
Preference number: 3 (lower is better)
Translates to: SGHGQVGHAEVQ*PESPEIIVWGM
Trigger: CATGCCCCAGACTATTATCTCAGGGCTTTCTGGGCACTGCACTTCAGCGTGGCCCACCTGCCCATGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
3UTR GCA 72 bp AGACATAGATCACAGAGCTCAAATCCACACCTAGTCTaGACCAAAGCCCAGGCAGGGCAAGGTGTAGGACTA +
Preference number: 3 (lower is better)
Translates to: RHRSQSSNPHLV*TKAQAGQGVGL
Trigger: TAGTCCTACACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCTATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
3UTR CCA 72 bp AGAAGCCACCTGATTTCAGCCCTGTCTCACCGTCTTTaGGCTAAGGAACATCACGCAAAGACCGAAAAGTGG +
Preference number: 3 (lower is better)
Translates to: RSHLISALSHRL*AKEHHAKTEKW
Trigger: CCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGAAATCAGGTGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CACCTGTGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACTCTGGGGAGCCCTGGCGGAGCTTCTCGTaGCGTGCACGGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: HLWVSQPVGDCYADSGEPWRSFS*RARACS
Trigger: GGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCA...GGGCTCCCCAGAGTCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCACAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp TCAGGGCATGGGCAGGTGGGCCACGCTGAAGTGCAGTGCCCAGAAAGCCCTGAGCATGGCACCTGTGGGTaGGCCAGCCAGTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: SGHGQVGHAEVQCPESPEHGTCG*ASQWET
Trigger: AGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATG...CTCAGGGCTTTCTGGGCACTGCACTTCAGCGTGGCCCACCTGCCCATGCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR TCA 90 bp CACCTGTGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACTCTGGGGAGCCCCTCCCCCTGCCTAGATaGTGTCCTTGGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: HLWVSQPVGDCYADSGEPLPLPR*CPWPAP
Trigger: AGGTGCTGGCCAAGGACATCATCTAGGCAGGGGGAG...GGGCTCCCCAGAGTCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCACAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp TGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACTCTGGGGAGCCCCATAATTCAGGCAGGGGCATCTaGTCCCAGGGGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: WVSQPVGDCYADSGEPHNSGRGI*SQGPSS
Trigger: GGAGGAAGGCCCCTGGGATCAGATGCCCCTGCCTGA...ATTATGGGGCTCCCCAGAGTCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGTGTGCACATGGCACCTGTGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGATGGCGGAGCTTCTCGTaGCGTGCACGGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SVHMAPVGEPASGRLLRRWRSFS*RARACS
Trigger: GGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCA...TCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TTGGTCACAGCTGTTCAGCCCAGGCTCTCCCCCTGCCTAGATGATGTCCTTGGCTCCGGCCAGCGTCCATaGTGGGTGGCACTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LVTAVQPRLSPCLDDVLGSGQRP*WVALRC
Trigger: GCACCTCAGTGCCACCCAGCATGGACGCTGGCCGGA...GCCAAGGACATCATCTAGGCAGGGGGAGAGCCTGGGCTGAACAGCTGTGACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp TCAGGGCATGGGCAGGTGGGCCACGCTGAAGTGCAGTGCCCAGAAAGCCCTGAGCCAGGACGCCTGATGTaGAGCTACAGCCAGAATAGC +
Preference number: 4 (lower is better)
Translates to: SGHGQVGHAEVQCPESPEPGRLM*SYSQNS
Trigger: GCTATTCTGGCTGTAGCTTCACATCAGGCGTCCTGG...CTCAGGGCTTTCTGGGCACTGCACTTCAGCGTGGCCCACCTGCCCATGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR TCA 90 bp CACCTGTGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACTCTGGGGAGCCCCCAGGACGCCTGATGTaGAGCTACAGCCAGAATAGC +
Preference number: 4 (lower is better)
Translates to: HLWVSQPVGDCYADSGEPPGRLM*SYSQNS
Trigger: GCTATTCTGGCTGTAGCTTCACATCAGGCGTCCTGG...GGGCTCCCCAGAGTCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCACAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGTGCGCCGCGACTCTGTaGGCTCGGCCCGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQCAATL*ARPGSR
Trigger: ACGGCTGCCGGGCCGAGCGCACAGAGTCGCGGCGCA...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR GCA 90 bp CAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATACAGGGCTGGGTGGGCTaGCCTGGGCAGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QAPEEPHFLLFQAHVVEIQGWVG*PGQGPP
Trigger: TGGAGGCCCCTGCCCAGGGCAGCCCACCCAGCCCTG...TATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CACCTGTGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACTCTGGGGAGCCCGACCGAAAAGTGGTCTaGCAAGCTCCAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HLWVSQPVGDCYADSGEPDRKVV*QAPEEP
Trigger: TGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC...GGGCTCCCCAGAGTCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCACAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCAAAGGCTACACGGCCTaGGCGCTCCCGGCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LRNITQRPKSGLPSSRGAKGYTA*ALPASP
Trigger: CGGGCTCGCCGGGAGCGCCCAGGCCGTGTAGCCTTT...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAAAGGCTACACGGCCTaGGCGCTCCCGGCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PWHYPPAKEVQPKPPQSPKGYTA*ALPASP
Trigger: CGGGCTCGCCGGGAGCGCCCAGGCCGTGTAGCCTTT...TGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACTCTGGGGAGCCCCATAATCAATCCTCCCGGGATTaGCGCAGTGCCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WVSQPVGDCYADSGEPHNQSSRD*RSACSS
Trigger: GGAGCTGCAGGCACTGCGCCAATCCCGGGAGGATTG...ATTATGGGGCTCCCCAGAGTCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTCACCAGGGCTGGGTaGGCTGCCCTGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TQRPKSGLPSSRGATFSPLTRAG*AALGRG
Trigger: GCCCCTGCCCAGGGCAGCCCACCCAGCCCTGGTGAG...AGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAAGCTGTGGGTGTGCTCACCAGGGCTGGGTaGGCTGCCCTGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FLLFQAHVVEIEEQAVGVLTRAG*AALGRG
Trigger: GCCCCTGCCCAGGGCAGCCCACCCAGCCCTGGTGAG...CACACCCACAGCTTGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp AGTGTGCACATGGCACCTGTGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGAGCTCGGAGAAGCCCATaGGGGACTCCAGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SVHMAPVGEPASGRLLRRARRSP*GTPGSN
Trigger: GTTGCTTCCTGGAGTCCCTCATGGGCTTCTCCGAGC...TCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TTGGTCACAGCTGTTCAGCCCAGGCTCTCCCCCTGCCTAGATGATGTCCTTGGCCTGGGGTACCCCAGCTaGCGAAAGCTTCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LVTAVQPRLSPCLDDVLGLGYPS*RKLPLQ
Trigger: CTGCAGTGGAAGCTTTCGGCAGCTGGGGTACCCCAG...GCCAAGGACATCATCTAGGCAGGGGGAGAGCCTGGGCTGAACAGCTGTGACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCAGGGCTGGGTGGGCTaGCCTGGGCAGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QRPKSGLPSSRGATFSPLQGWVG*PGQGPP
Trigger: TGGAGGCCCCTGCCCAGGGCAGCCCACCCAGCCCTG...AAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATACCTCCTCACCAGGGCTaGGTGGGCTGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QAPEEPHFLLFQAHVVEIPPHQG*VGCPGQ
Trigger: CTGCCCAGGGCAGCCCACCCAGCCCTGGTGAGGAGG...TATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp ACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCTCAGGCAGGGGCATCTaGTCCCAGGGGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TPGITHQPKKCNQSLLNLSGRGI*SQGPSS
Trigger: GGAGGAAGGCCCCTGGGATCAGATGCCCCTGCCTGA...GAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp GGCAAGGGGCAGGCCCAGAGCCTGCGTTTCTTGGCACAGACACAGAGAGAAATGCAGATCCTATCGCAGTaGCAGCCACAATCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GKGQAQSLRFLAQTQREMQILSQ*QPQSSR
Trigger: CCGGGAGGATTGTGGCTGTCACTGCGATAGGATCTG...CATTTCTCTCTGTGTCTGTGCCAAGAAACGCAGGCTCTGGGCCTGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR GCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCTGGTGGTGCCGGACGTaGTCTGGGGTCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: LRNITQRPKSGLPSSRGAWWCRT*SGVWGQ
Trigger: CTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCA...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCATGGCAGCCCTGCCTCTaGCTGGGGTACCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RPKSGLPSSRGATFSPLPWQPCL*LGYPSC
Trigger: GCAGCTGGGGTACCCCAGGCAGAGGCAGGGCTGCCA...TGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp ACCCCACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCATTCCAACCGGCCACCTaGCACAGCGACTGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TPPLALPTSQRSATKASSFQPAT*HSDCQV
Trigger: GACTTGGCAGTCGCTGTGGCAGGTGGCCGGTTGGAA...TGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp ACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTGTTGGGTGGCACTGAGGTaGCAGGAAGGCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TELKSTPSLHQSPGRARCWVALR*QEGCLP
Trigger: GGGAAGGCAGCCTTCCTGGCACCTCAGTGCCACCCA...ACACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCTCCGGCCAGCGTCCATaGTGGGTGGCACTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRNITQRPKSGLPSSRGASGQRP*WVALRC
Trigger: GCACCTCAGTGCCACCCAGCATGGACGCTGGCCGGA...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp GACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCTTGAGGGCCTGTaGCCACCCCACCCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: DRKVVCQAPEEPHFLLFQALEGL*PPHPWH
Trigger: ATGCCAGGGGTGGGGTGGGCACAGGCCCTCAAGAGC...CTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTGGTCACAGCTGTTCAGCCCAGGCTCTCCCCCTGCCTAGATGATGTCCTTGGCTCCTCTTTCAAGCGCTaGCGGAGCTTCTCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: LVTAVQPRLSPCLDDVLGSSFKR*RSFSCR
Trigger: ACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGA...GCCAAGGACATCATCTAGGCAGGGGGAGAGCCTGGGCTGAACAGCTGTGACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp GGCAAGGGGCAGGCCCAGAGCCTGCGTTTCTTGGCACAGACACAGAGAGAAATGGCTGTGTGGTCCATCTaGCACTTGATGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GKGQAQSLRFLAQTQREMAVWSI*HLMPAR
Trigger: CCTGGCAGGCATCAAGTGCCAGATGGACCACACAGC...CATTTCTCTCTGTGTCTGTGCCAAGAAACGCAGGCTCTGGGCCTGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CCA 90 bp AGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCACCTCCTCACCAGGGCTaGGTGGGCTGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGATFSPLPGSRCGDRRAPPHQG*VGCPGQ
Trigger: CTGCCCAGGGCAGCCCACCCAGCCCTGGTGAGGAGG...TGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CACCTGTGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACTCTGGGGAGCCCCTGTCTCACCGTCTTTaGGCTAAGGAACATCACGCA +
Preference number: 4 (lower is better)
Translates to: HLWVSQPVGDCYADSGEPLSHRL*AKEHHA
Trigger: TGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAG...GGGCTCCCCAGAGTCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCACAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp AAAACCAGGAGTGTGCACATGGCACCTGTGGGTGAGCCAGCCAGTGGGAGACTGCTCATCCAGGACGCCTaGTGTGAAGCTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KTRSVHMAPVGEPASGRLLIQDA*CEATAR
Trigger: TCTGGCTGTAGCTTCACATCAGGCGTCCTGGATGAG...CAGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCACACTCCTGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp ACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTGTGCTCGGAGAAGCCCATaGGGGACTCCAGGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: TELKSTPSLHQSPGRARCARRSP*GTPGSN
Trigger: GTTGCTTCCTGGAGTCCCTCATGGGCTTCTCCGAGC...ACACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp TCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTCTCCCCCTGCCTAGATaGTGTCCTTGGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: SQSSNPHLVCTKAQAGQGLPLPR*CPWPAP
Trigger: AGGTGCTGGCCAAGGACATCATCTAGGCAGGGGGAG...ACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp ACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCGCAGGTGGGCCACGCTaGAGTGCAGTGCCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: TPGITHQPKKCNQSLLNLAGGPR*SAVPRK
Trigger: CTTTCTGGGCACTGCACTTCAGCGTGGCCCACCTGC...GAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR GCA 90 bp AGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCATGGTGGTGCCGGACGTaGTCTGGGGTCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: RPKSGLPSSRGATFSPLPWWCRT*SGVWGQ
Trigger: CTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCA...TGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGGCCCAGTCATGGTGGTaGCGGACGTGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQAQSWW*RTCSGV
Trigger: GACCCCAGAGCACGTCCGGCACCACCATGACTGGGC...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTTGGCAGCCCTGCCTCTaGCTGGGGTACCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRPKSGLPSSRGATFSPLWQPCL*LGYPSC
Trigger: GCAGCTGGGGTACCCCAGGCAGAGGCAGGGCTGCCA...AAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTGCCTCCTGTTCCAACTaGAGGCGGGTGAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SQSSNPHLVCTKAQAGQGASCSN*RRVSVW
Trigger: CCACACACTCACCCGCCTGCAGTTGGAACAGGAGGC...ACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACAGCCCAGTCATGGTaGTGCCGGACGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRNITQRPKSGLPSSRGATAQSW*CRTCSG
Trigger: CCCAGAGCACGTCCGGCACCACCATGACTGGGCTGT...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp GACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGACAGCCCAGTCATGGTaGTGCCGGACGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DRKVVCQAPEEPHFLLFQTAQSW*CRTCSG
Trigger: CCCAGAGCACGTCCGGCACCACCATGACTGGGCTGT...CTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACCCCACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCACCAGCTCATTGTTCATaGGGGGCTTGGCCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: TPPLALPTSQRSATKASSPAHCS*GAWPVG
Trigger: TCCCACTGGCCAAGCCCCCCATGAACAATGAGCTGG...TGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTAGCTGTGGGTCCAGCTaGCCAGGCCACCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TQRPKSGLPSSRGATFSPSCGSS*PGHQGH
Trigger: GTGACCCTGGTGGCCTGGCCAGCTGGACCCACAGCT...AGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTTCAGCCCTGTCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAACCACCCCTCGCCAACTaGCCTCAGGGCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FQPCLTVFGLRNITQRPKPPLAN*PQGMGR
Trigger: CCTGCCCATGCCCTGAGGCCAGTTGGCGAGGGGTGG...TTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR TCA 90 bp GACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGATCCTTCGCACACCTaGAGCCCTCAGCAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: DRKVVCQAPEEPHFLLFQDPSHT*SPQQSS
Trigger: CGAGCTCTGCTGAGGGCTTCAGGTGTGCGAAGGATC...CTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp CCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATCAAGCTGAGATCCACTaGGCTACTCCGGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PSSRGATFSPLPGSRCGDQAEIH*ATPASV
Trigger: GACGCTGGCCGGAGTAGCTCAGTGGATCTCAGCTTG...ATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp CCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAACATGGCACCTGTGGGTaGGCCAGCCAGTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: PGITHQPKKCNQSLLNLQHGTCG*ASQWET
Trigger: AGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATG...TTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCATGCCGTGCACGGGCTTaGTCCTGCGCAAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RPKSGLPSSRGATFSPLPCRARA*SCANSA
Trigger: GGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCA...TGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAGAGCTTCTCGTGCCGTaGACGGGCTTGCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RGATFSPLPGSRCGDRRAELLVP*TGLLLR
Trigger: GCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTC...TGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGATTGGCGCAGTGCCTaGAGCTCCCGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPKSGLPSSRGATFSPLPDWRSA*SSRFSS
Trigger: GGAGGAGAAGCGGGAGCTGCAGGCACTGCGCCAATC...TGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TTATTGGTACCTGTAAGCTCAGGTACAAGGTGTTCCCACAAGCACACAGGCTGGCCGGGATTGGCGCAGTaGCTGCAGCTCCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLVPVSSGTRCSHKHTGWPGLAQ*LQLPLL
Trigger: GAGAAGCGGGAGCTGCAGGCACTGCGCCAATCCCGG...CCAGCCTGTGTGCTTGTGGGAACACCTTGTACCTGAGCTTACAGGTACCAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR GCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCCTGGCACTTGATGCCTaGCAGGCTGCAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LRNITQRPKSGLPSSRGALALDA*QAAAAG
Trigger: ACCTGCAGCTGCAGCCTGGCAGGCATCAAGTGCCAG...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGATCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGCCTCCTGTTCCAACTaGAGGCGGGTGAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSQSSNPHLVCTKAQAGQASCSN*RRVSVW
Trigger: CCACACACTCACCCGCCTGCAGTTGGAACAGGAGGC...TTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATATGGGTGGCACTGAGGTaGCAGGAAGGCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QAPEEPHFLLFQAHVVEIWVALR*QEGCLP
Trigger: GGGAAGGCAGCCTTCCTGGCACCTCAGTGCCACCCA...TATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTGCTCTTGAGGGCCTGTaGCCACCCCACCCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: QRPKSGLPSSRGATFSPLALEGL*PPHPWH
Trigger: ATGCCAGGGGTGGGGTGGGCACAGGCCCTCAAGAGC...AAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AAAACCAGGAGTGTGCACATGGCACCTGTGGGTGAGCCAGCCAGTGGGAGACTGCACGCTGAAGTGCAGTaGCCAGAAAGCCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: KTRSVHMAPVGEPASGRLHAEVQ*PESPEI
Trigger: TATCTCAGGGCTTTCTGGGCACTGCACTTCAGCGTG...CAGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCACACTCCTGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CCA 90 bp ACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTGTACGTGCTCTGGGGTCTaGGGACAGACAGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: TELKSTPSLHQSPGRARCTCSGV*GQTACN
Trigger: ATTGCAGGCTGTCTGTCCCCAGACCCCAGAGCACGT...ACACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CCA 90 bp CCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATATTCCACACGGCCCATaGGGTTCTCACAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PSSRGATFSPLPGSRCGDIPHGP*GSHSPP
Trigger: GGGAGGGCTGTGAGAACCCCATGGGCCGTGTGGAAT...ATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTCAGGGTTCATCAACGCCAGGCTaGAAGCCAGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YSLHSPVDLATHGSRAQGSSTPG*KPGPGR
Trigger: CCTGCCTGGCCCTGGCTTCCAGCCTGGCGTTGATGA...ACCCTGAGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCTGCACATGGCACCTGTaGGTGAGCCAGCCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: TPGITHQPKKCNQSLLNLCTWHL*VSQPVG
Trigger: TCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCA...GAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TCAGCCCTGTCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGAGCAAGCTGTGGGTGTaGGGGGCCGGGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SALSHRLWAKEHHAKTEKSKLWV*GAGQLK
Trigger: TTTCAGCTGCCCGGCCCCCCACACCCACAGCTTGCT...CTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACTCTGGGGAGCCCCATAATGGCAGAAGGGAGTTTTaGTCACAGCTGTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: WVSQPVGDCYADSGEPHNGRREF*SQLFSP
Trigger: TGGGCTGAACAGCTGTGACCAAAACTCCCTTCTGCC...ATTATGGGGCTCCCCAGAGTCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CCA 90 bp ACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCAGGGCATGGGCAGGTaGGCCACGCTGAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: TQRPKSGLPSSRGATFSPQGMGR*ATLKCS
Trigger: ACTGCACTTCAGCGTGGCCCACCTGCCCATGCCCTG...AGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CCA 90 bp ACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCACAAGCACACAGGCTaGCAAGGCCTCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TPGITHQPKKCNQSLLNLHKHTG*QGLLGK
Trigger: CTTGCCCAGGAGGCCTTGCCAGCCTGTGTGCTTGTG...GAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR TCA 90 bp TTGGTCACAGCTGTTCAGCCCAGGCTCTCCCCCTGCCTAGATGATGTCCTTGGCGGAAGTAGAAGACGGTaGTCCCATCAAAGGCTACAC +
Preference number: 4 (lower is better)
Translates to: LVTAVQPRLSPCLDDVLGGSRRR*SHQRLH
Trigger: GTGTAGCCTTTGATGGGATCACCGTCTTCTACTTCC...GCCAAGGACATCATCTAGGCAGGGGGAGAGCCTGGGCTGAACAGCTGTGACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp ACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCTGGATGGAAGCAGCTaGGGTTGTCCAGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TPGITHQPKKCNQSLLNLLDGSS*GCPGSP
Trigger: TGGGGAACCTGGACAACCTCAGCTGCTTCCATCCAG...GAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGCAAGCTGAGATCCACTaGGCTACTCCGGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQQAEIH*ATPASV
Trigger: GACGCTGGCCGGAGTAGCTCAGTGGATCTCAGCTTG...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp GGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAATAGCCCAGTCATGGTGGTaGCGGACGTGCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GITHQPKKCNQSLLNLQIAQSWW*RTCSGV
Trigger: GACCCCAGAGCACGTCCGGCACCACCATGACTGGGC...TATTTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGATCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGCACGGGCTTGCTCCTaGGCAAACTCAGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RSQSSNPHLVCTKAQAGQARACS*ANSAKE
Trigger: CTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGC...TTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAGATTGGCGCAGTGCCTaGAGCTCCCGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGATFSPLPGSRCGDRRADWRSA*SSRFSS
Trigger: GGAGGAGAAGCGGGAGCTGCAGGCACTGCGCCAATC...TGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TCAGCCCTGTCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGCTGGCACTTGATGCCTaGCAGGCTGCAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SALSHRLWAKEHHAKTEKLALDA*QAAAAG
Trigger: ACCTGCAGCTGCAGCCTGGCAGGCATCAAGTGCCAG...CTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGATCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGCAGCCACAGGGGAATaGTGTGTGGTCCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: RSQSSNPHLVCTKAQAGQAATGE*CVVHLA
Trigger: TGCCAGATGGACCACACAGCATTCCCCTGTGGCTGC...TTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCTCAACAGCCCAGTCATaGTGGTGCCGGACGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TPGITHQPKKCNQSLLNLSTAQS*WCRTCS
Trigger: AGAGCACGTCCGGCACCACCATGACTGGGCTGTTGA...GAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATTCAACAGCCCAGTCATaGTGGTGCCGGACGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSSRGATFSPLPGSRCGDSTAQS*WCRTCS
Trigger: AGAGCACGTCCGGCACCACCATGACTGGGCTGTTGA...ATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTGAGCAGGAGCGAGACTaGCACCCAGAGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TQRPKSGLPSSRGATFSPEQERD*HPEEEE
Trigger: CTCCTCTTCCTCTGGGTGCCAGTCTCGCTCCTGCTC...AGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCGGAGACAGAAGAGCTTaGGGAGCAGGAGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: LRNITQRPKSGLPSSRGAGDRRA*GAGARL
Trigger: CAGTCTCGCTCCTGCTCCCCAAGCTCTTCTGTCTCC...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAAGCTGTGGGTGTGATTCCACACGGCCCATaGGGTTCTCACAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: FLLFQAHVVEIEEQAVGVIPHGP*GSHSPP
Trigger: GGGAGGGCTGTGAGAACCCCATGGGCCGTGTGGAAT...CACACCCACAGCTTGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp AGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCATCATCAACGCCAGGCTaGAAGCCAGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGATFSPLPGSRCGDRRASSTPG*KPGPGR
Trigger: CCTGCCTGGCCCTGGCTTCCAGCCTGGCGTTGATGA...TGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTCAGGTCTCTTGGGGCTaGGAAAAGACATCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SQSSNPHLVCTKAQAGQGQVSWG*EKTSWS
Trigger: GGACCAGGATGTCTTTTCCCAGCCCCAAGAGACCTG...ACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTTCAGCCCTGTCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGCAAGCTGTGGGTGTaGGGGGCCGGGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: FQPCLTVFGLRNITQRPKSKLWV*GAGQLK
Trigger: TTTCAGCTGCCCGGCCCCCCACACCCACAGCTTGCT...TTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGCAGATCCTATCGCAGTaGCAGCCACAATCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQQILSQ*QPQSSR
Trigger: CCGGGAGGATTGTGGCTGTCACTGCGATAGGATCTG...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGACCTGCCACAGCGACTaGCAAGTCCTCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQTCHSD*QVLLHR
Trigger: TCTGTGGAGGAGGACTTGGCAGTCGCTGTGGCAGGT...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTCAGGGTACCTGCCACAGCGACTaGCAAGTCCTCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: YSLHSPVDLATHGSRAQGTCHSD*QVLLHR
Trigger: TCTGTGGAGGAGGACTTGGCAGTCGCTGTGGCAGGT...ACCCTGAGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTTTCCAACCGGCCACCTaGCACAGCGACTGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: QRPKSGLPSSRGATFSPLFQPAT*HSDCQV
Trigger: GACTTGGCAGTCGCTGTGGCAGGTGGCCGGTTGGAA...AAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCAATCCACACCTAGTCTaGACCAAAGCCCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRNITQRPKSGLPSSRGANPHLV*TKAQAG
Trigger: CCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATT...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TTATTGGTACCTGTAAGCTCAGGTACAAGGTGTTCCCACAAGCACACAGGCTGGTGGGCCACGCTGAAGTaGAGTGCCCAGAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLVPVSSGTRCSHKHTGWWATLK*SAQKAL
Trigger: CAGGGCTTTCTGGGCACTGCACTTCAGCGTGGCCCA...CCAGCCTGTGTGCTTGTGGGAACACCTTGTACCTGAGCTTACAGGTACCAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CCA 90 bp TTATTGGTACCTGTAAGCTCAGGTACAAGGTGTTCCCACAAGCACACAGGCTGGGAGCAGGAGCGAGACTaGCACCCAGAGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LLVPVSSGTRCSHKHTGWEQERD*HPEEEE
Trigger: CTCCTCTTCCTCTGGGTGCCAGTCTCGCTCCTGCTC...CCAGCCTGTGTGCTTGTGGGAACACCTTGTACCTGAGCTTACAGGTACCAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CCA 90 bp CCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAATCCTCTTTCAAGCGCTaGCGGAGCTTCTCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PGITHQPKKCNQSLLNLQSSFKR*RSFSCR
Trigger: ACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGA...TTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp AGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGCTGTGTGGTCCATCTaGCACTTGATGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RPKSGLPSSRGATFSPLPAVWSI*HLMPAR
Trigger: CCTGGCAGGCATCAAGTGCCAGATGGACCACACAGC...TGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp AGTGTGCACATGGCACCTGTGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGAACCAAAGATGTCAGCTaGATGGAAGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SVHMAPVGEPASGRLLRRTKDVS*MEAAEV
Trigger: AACCTCAGCTGCTTCCATCCAGCTGACATCTTTGGT...TCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGCTGGCATCCAGGTTaGCATTCTCATCCAGGACGC +
Preference number: 4 (lower is better)
Translates to: PSSRGATFSPLPGSRCGDSWHPG*HSHPGR
Trigger: GCGTCCTGGATGAGAATGCCAACCTGGATGCCAGCT...ATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCAGCTGGCATCCAGGTTaGCATTCTCATCCAGGACGC +
Preference number: 4 (lower is better)
Translates to: TPGITHQPKKCNQSLLNLSWHPG*HSHPGR
Trigger: GCGTCCTGGATGAGAATGCCAACCTGGATGCCAGCT...GAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATACCAGGAAGCAACTGCTaGCATCCCCAGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: QAPEEPHFLLFQAHVVEIPGSNC*HPQVET
Trigger: TGTCTCCACCTGGGGATGCCAGCAGTTGCTTCCTGG...TATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGCCAGGAAGCAACTGCTaGCATCCCCAGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQPGSNC*HPQVET
Trigger: TGTCTCCACCTGGGGATGCCAGCAGTTGCTTCCTGG...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp AGATCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAATGGGAAAAGACATCCTaGTCCTCACACCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RSQSSNPHLVCTKAQAGQWEKTS*SSHRHR
Trigger: CCTGTGCCGGTGTGAGGACCAGGATGTCTTTTCCCA...TTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp AGATCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAACAGGTCTCTTGGGGCTaGGAAAAGACATCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RSQSSNPHLVCTKAQAGQQVSWG*EKTSWS
Trigger: GGACCAGGATGTCTTTTCCCAGCCCCAAGAGACCTG...TTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTGTGCAAAGACCGAAAAGTaGTCTGCCAAGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TELKSTPSLHQSPGRARCAKTEK*SAKLQR
Trigger: CCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGC...ACACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp GACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGCCCCTCCTACATCCCTaGGCCTGGAATAAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: DRKVVCQAPEEPHFLLFQPLLHP*AWNKGC
Trigger: ACAGCCTTTATTCCAGGCCCAGGGATGTAGGAGGGG...CTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CCA 90 bp AGATCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGCCCTTTGCCCTCTCTaGGCTTCCTGTTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RSQSSNPHLVCTKAQAGQALCPL*ASCFLL
Trigger: AAGGAGGAAACAGGAAGCCCAGAGAGGGCAAAGGGC...TTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CCA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGCCTGAGATAATAGTCTaGGGCATGGTTCGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQPEIIV*GMVRAP
Trigger: CGGGGCGCGAACCATGCCCCAGACTATTATCTCAGG...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR TCA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGGTCAGACACCTTCTGTaGTGTGTAGTGAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQVRHLL*CVVRPQ
Trigger: CTGGGGCCTCACTACACATCACAGAAGGTGTCTGAC...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTGGGGAGCTTCTCGTGCCGTaGACGGGCTTGCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: NKSRELFENQECAHGTCGELLVP*TGLLLR
Trigger: GCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTC...CCCACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTGGGCCGGGATTGGCGCAGTaGCTGCAGCTCCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: NKSRELFENQECAHGTCGPGLAQ*LQLPLL
Trigger: GAGAAGCGGGAGCTGCAGGCACTGCGCCAATCCCGG...CCCACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp ACCCCACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAGAAACTCAAGATGCGTaGCAGGCTGTCATCATCAAC +
Preference number: 4 (lower is better)
Translates to: TPPLALPTSQRSATKASSETQDA*QAVIIN
Trigger: GTTGATGATGACAGCCTGGCACGCATCTTGAGTTTC...TGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTCAGGGTGACCGAAAAGTGGTCTaGCAAGCTCCAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: YSLHSPVDLATHGSRAQGDRKVV*QAPEEP
Trigger: TGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC...ACCCTGAGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTCAGGGTAATCCACACCTAGTCTaGACCAAAGCCCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YSLHSPVDLATHGSRAQGNPHLV*TKAQAG
Trigger: CCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATT...ACCCTGAGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGCAGAGGCGTCATCAATaGCATCCACCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQQRRHQ*HPPQVA
Trigger: TGCCACCTGTGGTGGATGCCATTGATGACGCCTCTG...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTCAGGGTCAGAGGCGTCATCAATaGCATCCACCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: YSLHSPVDLATHGSRAQGQRRHQ*HPPQVA
Trigger: TGCCACCTGTGGTGGATGCCATTGATGACGCCTCTG...ACCCTGAGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAGGGGAATGCTGTGTaGTCCATCTGGCACTTGATG +
Preference number: 4 (lower is better)
Translates to: TPGITHQPKKCNQSLLNLQGNAV*SIWHLM
Trigger: CATCAAGTGCCAGATGGACCACACAGCATTCCCCTG...GAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ATAAATTATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTAGCTGTGGGTCCAGCTaGCCAGGCCACCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: INYSLHSPVDLATHGSRASCGSS*PGHQGH
Trigger: GTGACCCTGGTGGCCTGGCCAGCTGGACCCACAGCT...AGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATAATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAATGGGAAAAGACATCCTaGTCCTCACACCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PGITHQPKKCNQSLLNLQWEKTS*SSHRHR
Trigger: CCTGTGCCGGTGTGAGGACCAGGATGTCTTTTCCCA...TTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp GACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGCAGCAACAGGTCTCTTaGGGCTGGGAAAAGACATCC +
Preference number: 4 (lower is better)
Translates to: DRKVVCQAPEEPHFLLFQQQQVS*GWEKTS
Trigger: GGATGTCTTTTCCCAGCCCCAAGAGACCTGTTGCTG...CTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp GACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGCGAAGTCAGAGTCACTaGAACTCAAGATGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: DRKVVCQAPEEPHFLLFQRSQSH*NSRCVP
Trigger: TGGCACGCATCTTGAGTTTCAGTGACTCTGACTTCG...CTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp CCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAGTGCCCAGAAAGCCCTaGGATAATAGTCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PGITHQPKKCNQSLLNLQVPRKP*DNSLGH
Trigger: ATGCCCCAGACTATTATCTCAGGGCTTTCTGGGCAC...TTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR GCA 90 bp ATAAATTATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTTGCCGTGCACGGGCTTaGTCCTGCGCAAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: INYSLHSPVDLATHGSRACRARA*SCANSA
Trigger: GGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCA...AGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATAATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TCAGCCCTGTCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGGCCGAAAGCTTCCACTaGAGCATCTCCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SALSHRLWAKEHHAKTEKAESFH*SISNFS
Trigger: GGAGAAGTTGGAGATGCTGCAGTGGAAGCTTTCGGC...CTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp GGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAATACCAGCTCATTGTTCATaGGGGGCTTGGCCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: GITHQPKKCNQSLLNLQIPAHCS*GAWPVG
Trigger: TCCCACTGGCCAAGCCCCCCATGAACAATGAGCTGG...TATTTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAAGATGTCAGCTGGATaGAAGCAGCTGAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: PSSRGATFSPLPGSRCGDKMSAG*KQLRLS
Trigger: GGACAACCTCAGCTGCTTCCATCCAGCTGACATCTT...ATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCAAGATGTCAGCTGGATaGAAGCAGCTGAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LRNITQRPKSGLPSSRGAKMSAG*KQLRLS
Trigger: GGACAACCTCAGCTGCTTCCATCCAGCTGACATCTT...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTGGTCACAGCTGTTCAGCCCAGGCTCTCCCCCTGCCTAGATGATGTCCTTGGCACAGTGTCCTCAAACTaGCTGTCAATAAAGGGATCT +
Preference number: 4 (lower is better)
Translates to: LVTAVQPRLSPCLDDVLGTVSSN*LSIKGS
Trigger: AGATCCCTTTATTGACAGCCAGTTTGAGGACACTGT...GCCAAGGACATCATCTAGGCAGGGGGAGAGCCTGGGCTGAACAGCTGTGACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAAGCTGTGGGTGTGCAGCAACAGGTCTCTTaGGGCTGGGAAAAGACATCC +
Preference number: 4 (lower is better)
Translates to: FLLFQAHVVEIEEQAVGVQQQVS*GWEKTS
Trigger: GGATGTCTTTTCCCAGCCCCAAGAGACCTGTTGCTG...CACACCCACAGCTTGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCACTGTCTCACCGTCTTTaGGCTAAGGAACATCACGCA +
Preference number: 4 (lower is better)
Translates to: PWHYPPAKEVQPKPPQSPLSHRL*AKEHHA
Trigger: TGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAG...TGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp TTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAAGCTGTGGGTGTGGGAAGTAGAAGACGGTaGTCCCATCAAAGGCTACAC +
Preference number: 4 (lower is better)
Translates to: FLLFQAHVVEIEEQAVGVGSRRR*SHQRLH
Trigger: GTGTAGCCTTTGATGGGATCACCGTCTTCTACTTCC...CACACCCACAGCTTGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp TTATTGGTACCTGTAAGCTCAGGTACAAGGTGTTCCCACAAGCACACAGGCTGGGCCGAAAGCTTCCACTaGAGCATCTCCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLVPVSSGTRCSHKHTGWAESFH*SISNFS
Trigger: GGAGAAGTTGGAGATGCTGCAGTGGAAGCTTTCGGC...CCAGCCTGTGTGCTTGTGGGAACACCTTGTACCTGAGCTTACAGGTACCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR GCA 90 bp CCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAAATCAGTCATGTCGCTaGTGCAGCTGTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PGITHQPKKCNQSLLNLQNQSCR*CSCCLP
Trigger: TGGGAGACAACAGCTGCAGCAGCGACATGACTGATT...TTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp AGATCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAACACCAGCCAAAGAAGTaGAACCAAAGCCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: RSQSSNPHLVCTKAQAGQHQPKK*NQSLLN
Trigger: ATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTG...TTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCCACCAGCCAAAGAAGTaGAACCAAAGCCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LRNITQRPKSGLPSSRGAHQPKK*NQSLLN
Trigger: ATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTG...GGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp AATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTGGGCGACGGCAAGCACTGTaGCGAAGGGCCATACCCAGA +
Preference number: 4 (lower is better)
Translates to: NKSRELFENQECAHGTCGRRQAL*RRAIPR
Trigger: TCTGGGTATGGCCCTTCGCCACAGTGCTTGCCGTCG...CCCACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTTCAGCCCTGTCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAAGCAAAGACCGAAAAGTaGTCTGCCAAGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FQPCLTVFGLRNITQRPKAKTEK*SAKLQR
Trigger: CCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTGC...TTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp AATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTGGGCTGGATGGAAGCAGCTaGGGTTGTCCAGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: NKSRELFENQECAHGTCGLDGSS*GCPGSP
Trigger: TGGGGAACCTGGACAACCTCAGCTGCTTCCATCCAG...CCCACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp AGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCACACAAGAAGACAAGCTaGGATCCACTGAGCTACTCC +
Preference number: 4 (lower is better)
Translates to: RGATFSPLPGSRCGDRRAHKKTS*DPLSYS
Trigger: GGAGTAGCTCAGTGGATCTCAGCTTGTCTTCTTGTG...TGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp CAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCACAAGAAGACAAGCTaGGATCCACTGAGCTACTCC +
Preference number: 4 (lower is better)
Translates to: QRPKSGLPSSRGATFSPLHKKTS*DPLSYS
Trigger: GGAGTAGCTCAGTGGATCTCAGCTTGTCTTCTTGTG...AAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp AATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTGGGGTGGCAGAAGCCACCTaGTTTCAGCCCTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: NKSRELFENQECAHGTCGVAEAT*FQPCLT
Trigger: GGTGAGACAGGGCTGAAATCAGGTGGCTTCTGCCAC...CCCACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp ATAAATTATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTGCACGGGCTTGCTCCTaGGCAAACTCAGCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: INYSLHSPVDLATHGSRAARACS*ANSAKE
Trigger: CTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGC...AGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATAATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp ATAAATTATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTGCAGCCACAGGGGAATaGTGTGTGGTCCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: INYSLHSPVDLATHGSRAAATGE*CVVHLA
Trigger: TGCCAGATGGACCACACAGCATTCCCCTGTGGCTGC...AGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAGGTGTTTGTCCTCATCCAGCTaGTCAAATTTCCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: TELKSTPSLHQSPGRARCLSSSS*SNFLFN
Trigger: GTTGAAGAGGAAATTTGACCAGCTGGATGAGGACAA...ACACCTTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ATAAATTATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTGGAGACAGAAGAGCTTaGGGAGCAGGAGCGAGACTG +
Preference number: 4 (lower is better)
Translates to: INYSLHSPVDLATHGSRAGDRRA*GAGARL
Trigger: CAGTCTCGCTCCTGCTCCCCAAGCTCTTCTGTCTCC...AGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATAATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp CCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAACCAAAGATGTCAGCTaGATGGAAGCAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PGITHQPKKCNQSLLNLQTKDVS*MEAAEV
Trigger: AACCTCAGCTGCTTCCATCCAGCTGACATCTTTGGT...TTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAAGCTGTGGGTGTGCATTTAGGAAGCAGCTaGCATCCAGGTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: FLLFQAHVVEIEEQAVGVHLGSS*HPGWHS
Trigger: AGAATGCCAACCTGGATGCCAGCTGCTTCCTAAATG...CACACCCACAGCTTGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp ATAAATTATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTCTCATCCAGGACGCCTaGTGTGAAGCTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: INYSLHSPVDLATHGSRALIQDA*CEATAR
Trigger: TCTGGCTGTAGCTTCACATCAGGCGTCCTGGATGAG...AGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATAATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR GCA 90 bp CAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTGAAACTCAAGATGCGTaGCAGGCTGTCATCATCAAC +
Preference number: 4 (lower is better)
Translates to: QRPKSGLPSSRGATFSPLETQDA*QAVIIN
Trigger: GTTGATGATGACAGCCTGGCACGCATCTTGAGTTTC...AAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ATAAATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTCAATCCTCCCGGGATTaGCGCAGTGCCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: INKSRELFENQECAHGTCQSSRD*RSACSS
Trigger: GGAGCTGCAGGCACTGCGCCAATCCCGGGAGGATTG...ACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp AGATCACAGAGCTCAAATCCACACCTAGTCTGCACCAAAGCCCAGGCAGGGCAAACAGTGTCCTCAAACTaGCTGTCAATAAAGGGATCT +
Preference number: 4 (lower is better)
Translates to: RSQSSNPHLVCTKAQAGQTVSSN*LSIKGS
Trigger: AGATCCCTTTATTGACAGCCAGTTTGAGGACACTGT...TTGCCCTGCCTGGGCTTTGGTGCAGACTAGGTGTGGATTTGAGCTCTGTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp TATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTCAGGGTATCCAGAGAATTGTTTaGAAACCAGGAGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: YSLHSPVDLATHGSRAQGIQRIV*KPGVCT
Trigger: TGTGCACACTCCTGGTTTTCAAACAATTCTCTGGAT...ACCCTGAGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp TTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAAGCTGTGGGTGTGTTGTCCTCATCCAGCTaGTCAAATTTCCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: FLLFQAHVVEIEEQAVGVLSSSS*SNFLFN
Trigger: GTTGAAGAGGAAATTTGACCAGCTGGATGAGGACAA...CACACCCACAGCTTGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp AATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTGGGCAGGGGAATGCTGTGTaGTCCATCTGGCACTTGATG +
Preference number: 4 (lower is better)
Translates to: NKSRELFENQECAHGTCGQGNAV*SIWHLM
Trigger: CATCAAGTGCCAGATGGACCACACAGCATTCCCCTG...CCCACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp GGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAATACATTTAGGAAGCAGCTaGCATCCAGGTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: GITHQPKKCNQSLLNLQIHLGSS*HPGWHS
Trigger: AGAATGCCAACCTGGATGCCAGCTGCTTCCTAAATG...TATTTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CCA 90 bp ATAAATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTTGCACATGGCACCTGTaGGTGAGCCAGCCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: INKSRELFENQECAHGTCCTWHL*VSQPVG
Trigger: TCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCA...ACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp AGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAATCCAGAGAATTGTTTaGAAACCAGGAGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: RGATFSPLPGSRCGDRRAIQRIV*KPGVCT
Trigger: TGTGCACACTCCTGGTTTTCAAACAATTCTCTGGAT...TGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR TCA 90 bp ATAAATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTCGAAGTCAGAGTCACTaGAACTCAAGATGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: INKSRELFENQECAHGTCRSQSH*NSRCVP
Trigger: TGGCACGCATCTTGAGTTTCAGTGACTCTGACTTCG...ACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp GCGGAGGACAACGACGCGACCCGCGTCCCGGCCGGGGACGCCCCCTaGGCCGCGACTCTGTGCGCTCGGCCCGGCAGCCGTCGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: AEDNDATRVPAGDAP*AATLCARPGSRRSS
Trigger: GCTGGACCGACGGCTGCCGGGCCGAGCGCACAGAGTCGCGGCGCAGGGGGCGTCCCCGGCCGGGACGCGGGTCGCGTCGTTGTCCTCCGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS TCA 90 bp TGCCTGCAGCTCCCGCTTCTCCTCCCGATCGATCCTTCGCACACCTaGAGCCCTCAGCAGAGCTCGACGTCGCCGGGCTGGGTAGGGCTG +
Preference number: 5 (lower is better)
Translates to: CLQLPLLLPIDPSHT*SPQQSSTSPGWVGL
Trigger: CAGCCCTACCCAGCCCGGCGACGTCGAGCTCTGCTGAGGGCTTCAGGTGTGCGAAGGATCGATCGGGAGGAGAAGCGGGAGCTGCAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp CTCCACAGAGGCGTCATCAATGGCATCCACCACAGGTGGCAGCCCTaGCTCTGCCTGGGGTACCCCAGCTGCCGAAAGCTTCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: LHRGVINGIHHRWQP*LCLGYPSCRKLPLQ
Trigger: CTGCAGTGGAAGCTTTCGGCAGCTGGGGTACCCCAGGCAGAGGCAGGGCTGCCACCTGTGGTGGATGCCATTGATGACGCCTCTGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 90 bp TCCCAGGCACGGGAGACAGAAGAGCTTGGGGAGCAGGAGCGAGACTaGCACCCAGAGGAAGAGGAGGAGGAGGAGACCGAGGAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SQARETEELGEQERD*HPEEEEEEETEELS
Trigger: GGACAACTCCTCGGTCTCCTCCTCCTCCTCTTCCTCTGGGTGCCAGTCTCGCTCCTGCTCCCCAAGCTCTTCTGTCTCCCGTGCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp TTCAAGCGCTGGCGGAGCTTCTCGTGCCGTGCACGGGCTTGCTCCTaGGCAAACTCAGCCAAAGAGAAGCGACGGCAAGCACTGTGGCGA +
Preference number: 5 (lower is better)
Translates to: FKRWRSFSCRARACS*ANSAKEKRRQALWR
Trigger: TCGCCACAGTGCTTGCCGTCGCTTCTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp AGAGGCGTCATCAATGGCATCCACCACAGGTGGCAGCCCTGCCTCTaGCTGGGGTACCCCAGCTGCCGAAAGCTTCCACTGCAGCATCTC +
Preference number: 5 (lower is better)
Translates to: RGVINGIHHRWQPCL*LGYPSCRKLPLQHL
Trigger: GAGATGCTGCAGTGGAAGCTTTCGGCAGCTGGGGTACCCCAGGCAGAGGCAGGGCTGCCACCTGTGGTGGATGCCATTGATGACGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp GATCCTATCGCAGTGACAGCCACAATCCTCCCGGGATTGGCGCAGTaGCTGCAGCTCCCGCTTCTCCTCCCGATCGATCCTTCGCACACC +
Preference number: 5 (lower is better)
Translates to: DPIAVTATILPGLAQ*LQLPLLLPIDPSHT
Trigger: GGTGTGCGAAGGATCGATCGGGAGGAGAAGCGGGAGCTGCAGGCACTGCGCCAATCCCGGGAGGATTGTGGCTGTCACTGCGATAGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 90 bp CAAGTCCTCCTCCACAGAGGCGTCATCAATGGCATCCACCACAGGTaGCAGCCCTGCCTCTGCCTGGGGTACCCCAGCTGCCGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: QVLLHRGVINGIHHR*QPCLCLGYPSCRKL
Trigger: AAGCTTTCGGCAGCTGGGGTACCCCAGGCAGAGGCAGGGCTGCCACCTGTGGTGGATGCCATTGATGACGCCTCTGTGGAGGAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 90 bp GAAGCCCATGAGGGACTCCAGGAAGCAACTGCTGGCATCCCCAGGTaGAGACAGGCCAGGCAGGGGGAAGTGAGGTGCCTCGATGTTGTC +
Preference number: 5 (lower is better)
Translates to: EAHEGLQEATAGIPR*RQARQGEVRCLDVV
Trigger: GACAACATCGAGGCACCTCACTTCCCCCTGCCTGGCCTGTCTCCACCTGGGGATGCCAGCAGTTGCTTCCTGGAGTCCCTCATGGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp AAAACCAGGAGTGTGCACATGGCACCTGTGGGTGAGCCAGCCAGTGGGAGACTGGTGCCGTGCACGGGCTaGCTCCTGCGCAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: KTRSVHMAPVGEPASGRLVPCTG*LLRKLS
Trigger: GCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCAC...CAGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCACACTCCTGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp GGTCAAATTTCCTCTTCAACAGCCCAGTCATGGTGGTGCCGGACGTaGTCTGGGGTCTGGGGACAGACAGCCTGCAATCCGGACGCTCGC +
Preference number: 5 (lower is better)
Translates to: GQISSSTAQSWWCRT*SGVWGQTACNPDAR
Trigger: GCGAGCGTCCGGATTGCAGGCTGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGAGGAAATTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS GCA 90 bp TCCTCTTTCAAGCGCTGGCGGAGCTTCTCGTGCCGTGCACGGGCTTaGTCCTGCGCAAACTCAGCCAAAGAGAAGCGACGGCAAGCACTG +
Preference number: 5 (lower is better)
Translates to: SSFKRWRSFSCRARA*SCANSAKEKRRQAL
Trigger: CAGTGCTTGCCGTCGCTTCTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp CCACTGAGCTACTCCGGCCAGCGTCCATGCTGGGTGGCACTGAGGTaGCAGGAAGGCTGCCTTCCCTTGACCCTTCAAGGCCACCATTTA +
Preference number: 5 (lower is better)
Translates to: PLSYSGQRPCWVALR*QEGCLPLTLQGHHL
Trigger: TAAATGGTGGCCTTGAAGGGTCAAGGGAAGGCAGCCTTCCTGGCACCTCAGTGCCACCCAGCATGGACGCTGGCCGGAGTAGCTCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 90 bp TGCTCCTGCGCAAACTCAGCCAAAGAGAAGCGACGGCAAGCACTGTaGCGAAGGGCCATACCCAGAGTACAGCCACCACGGCTGGGCACA +
Preference number: 5 (lower is better)
Translates to: CSCANSAKEKRRQAL*RRAIPRVQPPRLGT
Trigger: TGTGCCCAGCCGTGGTGGCTGTACTCTGGGTATGGCCCTTCGCCACAGTGCTTGCCGTCGCTTCTCTTTGGCTGAGTTTGCGCAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp CTCCAACTTCTCCTCTTTCAAGCGCTGGCGGAGCTTCTCGTGCCGTaGACGGGCTTGCTCCTGCGCAAACTCAGCCAAAGAGAAGCGACG +
Preference number: 5 (lower is better)
Translates to: LQLLLFQALAELLVP*TGLLLRKLSQREAT
Trigger: CGTCGCTTCTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGAGAAGTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp CTCCTCCTCCCCACCGAAGTCAGAGTCACTGAAACTCAAGATGCGTaGCAGGCTGTCATCATCAACGCCAGGCTGGAAGCCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LLLPTEVRVTETQDA*QAVIINARLEARAR
Trigger: CCTGGCCCTGGCTTCCAGCCTGGCGTTGATGATGACAGCCTGGCACGCATCTTGAGTTTCAGTGACTCTGACTTCGGTGGGGAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp GGTCAAATTTCCTCTTCAACAGCCCAGTCATGGTGGTGCCGGACGTaGTCTGGGGTCTGGGGACAGACAGCCTCGAGCGTTTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: GQISSSTAQSWWCRT*SGVWGQTASSVSTL
Trigger: GAGGGTGGAAACGCTCGAGGCTGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGAGGAAATTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514182.1
CDS CCA 90 bp CTGGCCAGGCCACCAGGGTCACTAGTACCAAAGATGTCAGCTGGATaGAAGCAGCTGAGGTTGTCCAGGTTCCCCACGCTCCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LARPPGSLVPKMSAG*KQLRLSRFPTLPSS
Trigger: GGAGGAAGGGAGCGTGGGGAACCTGGACAACCTCAGCTGCTTCCATCCAGCTGACATCTTTGGTACTAGTGACCCTGGTGGCCTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 90 bp CCAGCTGGCCAGGCCACCAGGGTCACTAGTACCAAAGATGTCAGCTaGATGGAAGCAGCTGAGGTTGTCCAGGTTCCCCACGCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: PAGQATRVTSTKDVS*MEAAEVVQVPHAPF
Trigger: GAAGGGAGCGTGGGGAACCTGGACAACCTCAGCTGCTTCCATCCAGCTGACATCTTTGGTACTAGTGACCCTGGTGGCCTGGCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 90 bp TCTTCAACAGCCCAGTCATGGTGGTGCCGGACGTGCTCTGGGGTCTaGGGACAGACAGCCTCGAGCGTTTCCACCCTCACGCTTTTACTG +
Preference number: 5 (lower is better)
Translates to: SSTAQSWWCRTCSGV*GQTASSVSTLTLLL
Trigger: CAGTAAAAGCGTGAGGGTGGAAACGCTCGAGGCTGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514182.1
CDS CCA 90 bp AATTTCCTCTTCAACAGCCCAGTCATGGTGGTGCCGGACGTGCTCTaGGGTCTGGGGACAGACAGCCTCGAGCGTTTCCACCCTCACGCT +
Preference number: 5 (lower is better)
Translates to: NFLFNSPVMVVPDVL*GLGTDSLERFHPHA
Trigger: AGCGTGAGGGTGGAAACGCTCGAGGCTGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGAGGAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514182.1
CDS-3UTR CAA 90 bp AAAACCAGGAGTGTGCACATGGCACCTGTGGGTGAGCCAGCCAGTGGGAGACTGGGGAGACAGAAGAGCTaGGGGAGCAGGAGCGAGACT +
Preference number: 5 (lower is better)
Translates to: KTRSVHMAPVGEPASGRLGRQKS*GSRSET
Trigger: AGTCTCGCTCCTGCTCCCCAAGCTCTTCTGTCTCCC...CAGTCTCCCACTGGCTGGCTCACCCACAGGTGCCATGTGCACACTCCTGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS TCA 90 bp AGCAGCTGGCATCCAGGTTGGCATTCTCATCCAGGACGCCTGATGTaGAGCTACAGCCAGAATAGCTGTGGGTCCAGCTGGCCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: SSWHPGWHSHPGRLM*SYSQNSCGSSWPGH
Trigger: GTGGCCTGGCCAGCTGGACCCACAGCTATTCTGGCTGTAGCTTCACATCAGGCGTCCTGGATGAGAATGCCAACCTGGATGCCAGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 90 bp TGTCCTCATCCAGCTGGTCAAATTTCCTCTTCAACAGCCCAGTCATaGTGGTGCCGGACGTGCTCTGGGGTCTGGGGACAGACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: CPHPAGQISSSTAQS*WCRTCSGVWGQTAC
Trigger: GCAGGCTGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGAGGAAATTTGACCAGCTGGATGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS CCA 90 bp GAAAGCTTCCACTGCAGCATCTCCAACTTCTCCTCTTTCAAGCGCTaGCGGAGCTTCTCGTGCCGTGCACGGGCTTGCTCCTGCGCAAAC +
Preference number: 5 (lower is better)
Translates to: ESFHCSISNFSSFKR*RSFSCRARACSCAN
Trigger: GTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGAGAAGTTGGAGATGCTGCAGTGGAAGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp ACCCCACCCCTGGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAGGGAGACAGAAGAGCTaGGGGAGCAGGAGCGAGACT +
Preference number: 5 (lower is better)
Translates to: TPPLALPTSQRSATKASSGRQKS*GSRSET
Trigger: AGTCTCGCTCCTGCTCCCCAAGCTCTTCTGTCTCCC...TGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCCAGGGGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp TGGGTGAGCCAGCCAGTGGGAGACTGTTACGCAGACTCTGGGGAGCCCCATAATGAAGGCTGCCTTCCCTaGACCCTTCAAGGCCACCAT +
Preference number: 5 (lower is better)
Translates to: WVSQPVGDCYADSGEPHNEGCLP*TLQGHH
Trigger: ATGGTGGCCTTGAAGGGTCAAGGGAAGGCAGCCTTC...ATTATGGGGCTCCCCAGAGTCTGCGTAACAGTCTCCCACTGGCTGGCTCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp CCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGGCAAAAGGGGCTCTaGAGGGCCTGTGCCCACCCC +
Preference number: 5 (lower is better)
Translates to: PSSRGATFSPLPGSRCGDRQKGL*RACAHP
Trigger: GGGGTGGGCACAGGCCCTCAAGAGCCCCTTTTGCCT...ATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp AGCATCTCCAACTTCTCCTCTTTCAAGCGCTGGCGGAGCTTCTCGTaGCGTGCACGGGCTTGCTCCTGCGCAAACTCAGCCAAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: SISNFSSFKRWRSFS*RARACSCANSAKEK
Trigger: CTTCTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGAGAAGTTGGAGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 90 bp CCTCATCCAGCTGGTCAAATTTCCTCTTCAACAGCCCAGTCATGGTaGTGCCGGACGTGCTCTGGGGTCTGGGGACAGACAGCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: PHPAGQISSSTAQSW*CRTCSGVWGQTACN
Trigger: ATTGCAGGCTGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGAGGAAATTTGACCAGCTGGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS CCA 90 bp ACCGGCACAGGCTCCATTAGAGATGCTGGGACAGTGTCCTCAAACTaGCTGTCAATAAAGGGATCTAGGGCTTCGGCGGCTGGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: TGTGSIRDAGTVSSN*LSIKGSRASAAGSE
Trigger: CTCCGAGCCAGCCGCCGAAGCCCTAGATCCCTTTATTGACAGCCAGTTTGAGGACACTGTCCCAGCATCTCTAATGGAGCCTGTGCCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp GGCAAGGGGCAGGCCCAGAGCCTGCGTTTCTTGGCACAGACACAGAGAGAAATGTCGCTGCTGCAGCTGTaGTCTCCCAGCTCATTGTTC +
Preference number: 5 (lower is better)
Translates to: GKGQAQSLRFLAQTQREMSLLQL*SPSSLF
Trigger: GAACAATGAGCTGGGAGACAACAGCTGCAGCAGCGA...CATTTCTCTCTGTGTCTGTGCCAAGAAACGCAGGCTCTGGGCCTGCCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS TCA 90 bp TCCCTTCCTCCTCTTCCTCCTCCTCCCCACCGAAGTCAGAGTCACTaGAACTCAAGATGCGTGCCAGGCTGTCATCATCAACGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SLPPLPPPPHRSQSH*NSRCVPGCHHQRQA
Trigger: AGCCTGGCGTTGATGATGACAGCCTGGCACGCATCTTGAGTTTCAGTGACTCTGACTTCGGTGGGGAGGAGGAGGAAGAGGAGGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS TCA 90 bp CTGGCAGAGCCTGGAGTAACTCAAAGGAGTCACAAGAAGACAAGCTaGGATCCACTGAGCTACTCCGGCCAGCGTCCATGCTGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LAEPGVTQRSHKKTS*DPLSYSGQRPCWVA
Trigger: TGCCACCCAGCATGGACGCTGGCCGGAGTAGCTCAGTGGATCTCAGCTTGTCTTCTTGTGACTCCTTTGAGTTACTCCAGGCTCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 90 bp GAGGAAGAGGAGGAGGAGGAGACCGAGGAGTTGTCCTCATCCAGCTaGTCAAATTTCCTCTTCAACAGCCCAGTCATGGTGGTGCCGGAC +
Preference number: 5 (lower is better)
Translates to: EEEEEEETEELSSSS*SNFLFNSPVMVVPD
Trigger: GTCCGGCACCACCATGACTGGGCTGTTGAAGAGGAAATTTGACCAGCTGGATGAGGACAACTCCTCGGTCTCCTCCTCCTCCTCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp TTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAAGCTGTGGGTGTGACAATCCTCCCGGGATaGGCGCAGTGCCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: FLLFQAHVVEIEEQAVGVTILPG*AQCLQL
Trigger: GAGCTGCAGGCACTGCGCCAATCCCGGGAGGATTGT...CACACCCACAGCTTGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp TATAGTCTTCACAGTCCAGTGGATTTAGCCACCCATGGGTCTAGGGCTCAGGGTACAATCCTCCCGGGATaGGCGCAGTGCCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: YSLHSPVDLATHGSRAQGTILPG*AQCLQL
Trigger: GAGCTGCAGGCACTGCGCCAATCCCGGGAGGATTGT...ACCCTGAGCCCTAGACCCATGGGTGGCTAAATCCACTGGACTGTGAAGACTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp GACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCAGTGGAAGCAGCTGAGGTaGTCCAGGTTCCCCACGCTC +
Preference number: 5 (lower is better)
Translates to: DRKVVCQAPEEPHFLLFQWKQLR*SRFPTL
Trigger: GAGCGTGGGGAACCTGGACAACCTCAGCTGCTTCCA...CTGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp GGCATTACCCACCAGCCAAAGAAGTGCAACCAAAGCCTCCTCAATCTCCAAATAAGGCAAAAGGGGCTCTaGAGGGCCTGTGCCCACCCC +
Preference number: 5 (lower is better)
Translates to: GITHQPKKCNQSLLNLQIRQKGL*RACAHP
Trigger: GGGGTGGGCACAGGCCCTCAAGAGCCCCTTTTGCCT...TATTTGGAGATTGAGGAGGCTTTGGTTGCACTTCTTTGGCTGGTGGGTAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 90 bp CAACTGCAGGCGGGTGAGTGTGTGGATGAAATGGGTCTGAACTCTTaGCTGATTAAATTCCACACGGCCCATGGGGTTCTCACAGCCCTC +
Preference number: 5 (lower is better)
Translates to: QLQAGECVDEMGLNS*LIKFHTAHGVLTAL
Trigger: GAGGGCTGTGAGAACCCCATGGGCCGTGTGGAATTTAATCAGGCAAGAGTTCAGACCCATTTCATCCACACACTCACCCGCCTGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp CTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGGAGGAGACCGAGGAGTaGTCCTCATCCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LWAKEHHAKTEKWSAKLQEETEE*SSSSWS
Trigger: TGACCAGCTGGATGAGGACAACTCCTCGGTCTCCTC...CTGGAGCTTGGCAGACCACTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp CAAAGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTTGGAAGCAGCTGAGGTaGTCCAGGTTCCCCACGCTC +
Preference number: 5 (lower is better)
Translates to: QRPKSGLPSSRGATFSPLWKQLR*SRFPTL
Trigger: GAGCGTGGGGAACCTGGACAACCTCAGCTGCTTCCA...AAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp AATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTGGGGTGCCGTGCACGGGCTaGCTCCTGCGCAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: NKSRELFENQECAHGTCGVPCTG*LLRKLS
Trigger: GCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCAC...CCCACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp TCAGCCCTGTCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAAAGTCGCTGCTGCAGCTGTaGTCTCCCAGCTCATTGTTC +
Preference number: 5 (lower is better)
Translates to: SALSHRLWAKEHHAKTEKSLLQL*SPSSLF
Trigger: GAACAATGAGCTGGGAGACAACAGCTGCAGCAGCGA...CTTTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp TTTCAGCCCTGTCTCACCGTCTTTGGGCTAAGGAACATCACGCAAAGACCGAAACAGCTGGCATCCAGGTaGGCATTCTCATCCAGGACG +
Preference number: 5 (lower is better)
Translates to: FQPCLTVFGLRNITQRPKQLASR*AFSSRT
Trigger: CGTCCTGGATGAGAATGCCAACCTGGATGCCAGCTG...TTTCGGTCTTTGCGTGATGTTCCTTAGCCCAAAGACGGTGAGACAGGGCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp AGAGGAGCCACATTTTCTCCTCTTCCAGGCTCACGTTGTGGAGATAGAAGAGCAGGGCAGAAGGGAGTTTaGGTCACAGCTGTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: RGATFSPLPGSRCGDRRAGQKGV*VTAVQP
Trigger: GGGCTGAACAGCTGTGACCAAAACTCCCTTCTGCCC...TGCTCTTCTATCTCCACAACGTGAGCCTGGAAGAGGAGAAAATGTGGCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CAA 90 bp AGACCGAAAAGTGGTCTGCCAAGCTCCAGAGGAGCCACATTTTCTCCTCTTCCACAGAGCCTGCGTTTCTaGGCACAGACACAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: RPKSGLPSSRGATFSPLPQSLRF*AQTQRE
Trigger: TTCTCTCTGTGTCTGTGCCAAGAAACGCAGGCTCTG...TGGAAGAGGAGAAAATGTGGCTCCTCTGGAGCTTGGCAGACCACTTTTCGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS-3UTR CAA 90 bp AATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTGGGGAAGGCTGCCTTCCCTaGACCCTTCAAGGCCACCAT +
Preference number: 5 (lower is better)
Translates to: NKSRELFENQECAHGTCGEGCLP*TLQGHH
Trigger: ATGGTGGCCTTGAAGGGTCAAGGGAAGGCAGCCTTC...CCCACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS-3UTR CAA 90 bp AATAAATCCAGAGAATTGTTTGAAAACCAGGAGTGTGCACATGGCACCTGTGGGAATAAAGCCTCTTTATaGGTACCTGTAAGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: NKSRELFENQECAHGTCGNKASL*VPVSSG
Trigger: ACCTGAGCTTACAGGTACCAATAAAGAGGCTTTATT...CCCACAGGTGCCATGTGCACACTCCTGGTTTTCAAACAATTCTCTGGATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS TCA 72 bp CTCCCGCTTCTCCTCCCGATCGATCCTTCGCACACCTaGAGCCCTCAGCAGAGCTCGACGTCGCCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: LPLLLPIDPSHT*SPQQSSTSPGW
Trigger: CCAGCCCGGCGACGTCGAGCTCTGCTGAGGGCTTCAGGTGTGCGAAGGATCGATCGGGAGGAGAAGCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp CTCCACAGAGGCGTCATCAATGGCATCCACCACAGGTaGCAGCCCTGCCTCTGCCTGGGGTACCCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LHRGVINGIHHR*QPCLCLGYPSC
Trigger: GCAGCTGGGGTACCCCAGGCAGAGGCAGGGCTGCCACCTGTGGTGGATGCCATTGATGACGCCTCTGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp AAGCGCTGGCGGAGCTTCTCGTGCCGTGCACGGGCTTaGTCCTGCGCAAACTCAGCCAAAGAGAAGCGACGG +
Preference number: 6 (lower is better)
Translates to: KRWRSFSCRARA*SCANSAKEKRR
Trigger: CCGTCGCTTCTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp GGCGTCATCAATGGCATCCACCACAGGTGGCAGCCCTaGCTCTGCCTGGGGTACCCCAGCTGCCGAAAGCTT +
Preference number: 6 (lower is better)
Translates to: GVINGIHHRWQP*LCLGYPSCRKL
Trigger: AAGCTTTCGGCAGCTGGGGTACCCCAGGCAGAGGCAGGGCTGCCACCTGTGGTGGATGCCATTGATGACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp GCAGTGACAGCCACAATCCTCCCGGGATTGGCGCAGTaGCTGCAGCTCCCGCTTCTCCTCCCGATCGATCCT +
Preference number: 6 (lower is better)
Translates to: AVTATILPGLAQ*LQLPLLLPIDP
Trigger: AGGATCGATCGGGAGGAGAAGCGGGAGCTGCAGGCACTGCGCCAATCCCGGGAGGATTGTGGCTGTCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp TACTCCGGCCAGCGTCCATGCTGGGTGGCACTGAGGTaGCAGGAAGGCTGCCTTCCCTTGACCCTTCAAGGC +
Preference number: 6 (lower is better)
Translates to: YSGQRPCWVALR*QEGCLPLTLQG
Trigger: GCCTTGAAGGGTCAAGGGAAGGCAGCCTTCCTGGCACCTCAGTGCCACCCAGCATGGACGCTGGCCGGAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CAA 72 bp CAAGCGCTGGCGGAGCTTCTCGTGCCGTGCACGGGCTaGCTCCTGCGCAAACTCAGCCAAAGAGAAGCGACG +
Preference number: 6 (lower is better)
Translates to: QALAELLVPCTG*LLRKLSQREAT
Trigger: CGTCGCTTCTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp TCCTCTTCAACAGCCCAGTCATGGTGGTGCCGGACGTaGTCTGGGGTCTGGGGACAGACAGCCTGCAATCCG +
Preference number: 6 (lower is better)
Translates to: SSSTAQSWWCRT*SGVWGQTACNP
Trigger: CGGATTGCAGGCTGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273153.10
CDS GCA 72 bp TGGCGGAGCTTCTCGTGCCGTGCACGGGCTTGCTCCTaGGCAAACTCAGCCAAAGAGAAGCGACGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: WRSFSCRARACS*ANSAKEKRRQA
Trigger: TGCTTGCCGTCGCTTCTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp TCCTCTTCAACAGCCCAGTCATGGTGGTGCCGGACGTaGTCTGGGGTCTGGGGACAGACAGCCTCGAGCGTT +
Preference number: 6 (lower is better)
Translates to: SSSTAQSWWCRT*SGVWGQTASSV
Trigger: AACGCTCGAGGCTGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514182.1
CDS CCA 72 bp GTAGAAGACGGTGATCCCATCAAAGGCTACACGGCCTaGGCGCTCCCGGCGAGCCCGCTTCAGGATAGACAG +
Preference number: 6 (lower is better)
Translates to: VEDGDPIKGYTA*ALPASPLQDRQ
Trigger: CTGTCTATCCTGAAGCGGGCTCGCCGGGAGCGCCCAGGCCGTGTAGCCTTTGATGGGATCACCGTCTTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp TTCAACAGCCCAGTCATGGTGGTGCCGGACGTGCTCTaGGGTCTGGGGACAGACAGCCTCGAGCGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: FNSPVMVVPDVL*GLGTDSLERFH
Trigger: GTGGAAACGCTCGAGGCTGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514182.1
CDS CAA 90 bp CTCCTCTTTCAAGCGCTGGCGGAGCTTCTCGTGCCGTGCACGGGCTaGCTCCTGCGCAAACTCAGCCAAAGAGAAGCGACGGCAAGCACT +
Preference number: 6 (lower is better)
Translates to: LLFQALAELLVPCTG*LLRKLSQREATAST
Trigger: AGTGCTTGCCGTCGCTTCTCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp CTCCTCTTTCAAGCGCTGGCGGAGCTTCTCGTGCCGTaGACGGGCTTGCTCCTGCGCAAACTCAGCCAAAGA +
Preference number: 6 (lower is better)
Translates to: LLFQALAELLVP*TGLLLRKLSQR
Trigger: TCTTTGGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp AACTTCTCCTCTTTCAAGCGCTGGCGGAGCTTCTCGTaGCGTGCACGGGCTTGCTCCTGCGCAAACTCAGCC +
Preference number: 6 (lower is better)
Translates to: NFSSFKRWRSFS*RARACSCANSA
Trigger: GGCTGAGTTTGCGCAGGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGAGAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp CACTGCAGCATCTCCAACTTCTCCTCTTTCAAGCGCTaGCGGAGCTTCTCGTGCCGTGCACGGGCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: HCSISNFSSFKR*RSFSCRARACS
Trigger: GGAGCAAGCCCGTGCACGGCACGAGAAGCTCCGCCAGCGCTTGAAAGAGGAGAAGTTGGAGATGCTGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp CCAGCTGGTCAAATTTCCTCTTCAACAGCCCAGTCATaGTGGTGCCGGACGTGCTCTGGGGTCTGGGGACAG +
Preference number: 6 (lower is better)
Translates to: PAGQISSSTAQS*WCRTCSGVWGQ
Trigger: CTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGAGGAAATTTGACCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp GCAAACTCAGCCAAAGAGAAGCGACGGCAAGCACTGTaGCGAAGGGCCATACCCAGAGTACAGCCACCACGG +
Preference number: 6 (lower is better)
Translates to: ANSAKEKRRQAL*RRAIPRVQPPR
Trigger: CCGTGGTGGCTGTACTCTGGGTATGGCCCTTCGCCACAGTGCTTGCCGTCGCTTCTCTTTGGCTGAGTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CAA 90 bp GGGTCACTAGTACCAAAGATGTCAGCTGGATGGAAGCAGCTGAGGTaGTCCAGGTTCCCCACGCTCCCTTCCTCCTCTTCCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GSLVPKMSAGWKQLR*SRFPTLPSSSSSSS
Trigger: GGAGGAGGAGGAAGAGGAGGAAGGGAGCGTGGGGAACCTGGACAACCTCAGCTGCTTCCATCCAGCTGACATCTTTGGTACTAGTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp GCTGGTCAAATTTCCTCTTCAACAGCCCAGTCATGGTaGTGCCGGACGTGCTCTGGGGTCTGGGGACAGACA +
Preference number: 6 (lower is better)
Translates to: AGQISSSTAQSW*CRTCSGVWGQT
Trigger: TGTCTGTCCCCAGACCCCAGAGCACGTCCGGCACCACCATGACTGGGCTGTTGAAGAGGAAATTTGACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CAA 90 bp CGAGACTGGCACCCAGAGGAAGAGGAGGAGGAGGAGACCGAGGAGTaGTCCTCATCCAGCTGGTCAAATTTCCTCTTCAACAGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: RDWHPEEEEEEETEE*SSSSWSNFLFNSPV
Trigger: GACTGGGCTGTTGAAGAGGAAATTTGACCAGCTGGATGAGGACAACTCCTCGGTCTCCTCCTCCTCCTCTTCCTCTGGGTGCCAGTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp CCCACCGAAGTCAGAGTCACTGAAACTCAAGATGCGTaGCAGGCTGTCATCATCAACGCCAGGCTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: PTEVRVTETQDA*QAVIINARLEA
Trigger: GGCTTCCAGCCTGGCGTTGATGATGACAGCCTGGCACGCATCTTGAGTTTCAGTGACTCTGACTTCGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp CAGGCCACCAGGGTCACTAGTACCAAAGATGTCAGCTaGATGGAAGCAGCTGAGGTTGTCCAGGTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: QATRVTSTKDVS*MEAAEVVQVPH
Trigger: GTGGGGAACCTGGACAACCTCAGCTGCTTCCATCCAGCTGACATCTTTGGTACTAGTGACCCTGGTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp CCCTTGACCCTTCAAGGCCACCATTTAGGAAGCAGCTaGCATCCAGGTTGGCATTCTCATCCAGGACGCCTG +
Preference number: 6 (lower is better)
Translates to: PLTLQGHHLGSS*HPGWHSHPGRL
Trigger: CAGGCGTCCTGGATGAGAATGCCAACCTGGATGCCAGCTGCTTCCTAAATGGTGGCCTTGAAGGGTCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS TCA 72 bp CATCCAGGTTGGCATTCTCATCCAGGACGCCTGATGTaGAGCTACAGCCAGAATAGCTGTGGGTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: HPGWHSHPGRLM*SYSQNSCGSSW
Trigger: CCAGCTGGACCCACAGCTATTCTGGCTGTAGCTTCACATCAGGCGTCCTGGATGAGAATGCCAACCTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS TCA 72 bp GCTGGCATCCAGGTTGGCATTCTCATCCAGGACGCCTaGTGTGAAGCTACAGCCAGAATAGCTGTGGGTCCA +
Preference number: 6 (lower is better)
Translates to: AGIQVGILIQDA*CEATARIAVGP
Trigger: TGGACCCACAGCTATTCTGGCTGTAGCTTCACATCAGGCGTCCTGGATGAGAATGCCAACCTGGATGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp GGCTCCATTAGAGATGCTGGGACAGTGTCCTCAAACTaGCTGTCAATAAAGGGATCTAGGGCTTCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: GSIRDAGTVSSN*LSIKGSRASAA
Trigger: AGCCGCCGAAGCCCTAGATCCCTTTATTGACAGCCAGTTTGAGGACACTGTCCCAGCATCTCTAATGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CAA 72 bp CACCCAGAGGAAGAGGAGGAGGAGGAGACCGAGGAGTaGTCCTCATCCAGCTGGTCAAATTTCCTCTTCAAC +
Preference number: 6 (lower is better)
Translates to: HPEEEEEEETEE*SSSSWSNFLFN
Trigger: GTTGAAGAGGAAATTTGACCAGCTGGATGAGGACAACTCCTCGGTCTCCTCCTCCTCCTCTTCCTCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CAA 90 bp CTTGACCCTTCAAGGCCACCATTTAGGAAGCAGCTGGCATCCAGGTaGGCATTCTCATCCAGGACGCCTGATGTGAAGCTACAGCCAGAA +
Preference number: 6 (lower is better)
Translates to: LDPSRPPFRKQLASR*AFSSRTPDVKLQPE
Trigger: TTCTGGCTGTAGCTTCACATCAGGCGTCCTGGATGAGAATGCCAACCTGGATGCCAGCTGCTTCCTAAATGGTGGCCTTGAAGGGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS GCA 72 bp GCGGGTGAGTGTGTGGATGAAATGGGTCTGAACTCTTaGCTGATTAAATTCCACACGGCCCATGGGGTTCTC +
Preference number: 6 (lower is better)
Translates to: AGECVDEMGLNS*LIKFHTAHGVL
Trigger: GAGAACCCCATGGGCCGTGTGGAATTTAATCAGGCAAGAGTTCAGACCCATTTCATCCACACACTCACCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CCA 72 bp AGCCCCATAATTACAAGAAAGCAGCAACAGGTCTCTTaGGGCTGGGAAAAGACATCCTGGTCCTCACACCGG +
Preference number: 6 (lower is better)
Translates to: SPIITRKQQQVS*GWEKTSWSSHR
Trigger: CCGGTGTGAGGACCAGGATGTCTTTTCCCAGCCCCAAGAGACCTGTTGCTGCTTTCTTGTAATTATGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1
CDS CAA 72 bp TCAAGGCCACCATTTAGGAAGCAGCTGGCATCCAGGTaGGCATTCTCATCCAGGACGCCTGATGTGAAGCTA +
Preference number: 6 (lower is better)
Translates to: SRPPFRKQLASR*AFSSRTPDVKL
Trigger: TAGCTTCACATCAGGCGTCCTGGATGAGAATGCCAACCTGGATGCCAGCTGCTTCCTAAATGGTGGCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273153.10
ENST00000514182.1