RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSPG5 (Homo sapiens)

Ensembl gene IDs: ENSG00000114646

Ensembl transcript IDs: ENST00000264723.9, ENST00000383738.6, ENST00000456150.5, ENST00000465441.1, ENST00000610462.1

Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 72 bp GAAGACAGTTCACATCCAAGTCAGCCTGGTCACCTTTaGCACCCTCAAGTTTGGGCGACATGGAGTTCTGGA +
Preference number: 3 (lower is better)
Translates to: EDSSHPSQPGHL*HPQVWATWSSG
Trigger: TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
3UTR-3UTR CAA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGATCAGCCTGGTCACCTTaGCCACCCTCAAGTTTGGGC +
Preference number: 3 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRSAWSP*PPSSLG
Trigger: GCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGA...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
3UTR-3UTR CAA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACCGCTTCCTCTCTTCTaGCTCTGCTTTAGGTTAAAT +
Preference number: 3 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKPLPLF*LCFRLN
Trigger: ATTTAACCTAAAGCAGAGCAAGAAGAGAGGAAGCGG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR TCA 90 bp AGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGAGGCAGGGGGCATGATTaGCTGCCCGAGGACCTCGTG +
Preference number: 4 (lower is better)
Translates to: SQPGHLCHPQVWATWSSGGRGHD*LPEDLV
Trigger: CACGAGGTCCTCGGGCAGTCAATCATGCCCCCTGCC...TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR GCA 90 bp GTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGGGGGCATGATTGACTaGCCGAGGACCTCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSLVTFATLKFGRHGVLDGGMID*PRTSWG
Trigger: TCCCCACGAGGTCCTCGGGCAGTCAATCATGCCCCC...ATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR GCA 90 bp AGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTGGAGGGACAGCATaGCACCGACTGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQPGHLCHPQVWATWSSGCGGTA*HRLVGW
Trigger: CCAGCCCACCAGTCGGTGGCATGCTGTCCCTCCACA...TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp CCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATGACTCCTCCTCTCACCGACTGGTGGGCTaGCCTGTCCCGGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PPSSLGDMEFWMLNDSSSHRLVG*PVPGPR
Trigger: TCTGGGGCCCGGGACAGGCCAGCCCACCAGTCGGTG...AGAGGAGGAGTCATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR TCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACCCACCGCCCCAGTGTaGCCCCAGCCACCCGGTACC +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRPTAPV*PQPPGT
Trigger: GGTACCGGGTGGCTGGGGTCACACTGGGGCGGTGGG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456150.5
CDS-3UTR CCA 90 bp CCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATGACTCCTCCTCTACCTCGTGGGGAGCCTaGAGCGTAGCTGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPSSLGDMEFWMLNDSSSTSWGA*SVAGRA
Trigger: GGCCCTTCCAGCTACGCTCCAGGCTCCCCACGAGGT...AGAGGAGGAGTCATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACTGGGTAAGTCAGCTCTaGCCCTTGAGGGTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: QFTSKSAWSPLPPSSLGDWVSQL*PLRVGC
Trigger: ACACCCGACCCTCAAGGGCCAGAGCTGACTTACCCA...GTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACGTTGGGGCTCCAGGGTaGCCTGAAATGGGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: QFTSKSAWSPLPPSSLGDVGAPG*PEMGKS
Trigger: TGACTTACCCATTTCAGGGCACCCTGGAGCCCCAAC...GTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR GCA 90 bp AGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGAGCCGCACAAAGCCACTaGGGCACTCAGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: SQPGHLCHPQVWATWSSGAAQSH*GTQCHF
Trigger: AAAATGGCACTGAGTGCCGCAGTGGCTTTGTGCGGC...TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR GCA 90 bp GTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATTGTAGTCCTGCGTGTTaGACCTGCAGAAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: VSLVTFATLKFGRHGVLDCSPAC*TCRRPL
Trigger: TAGGGGCCTTCTGCAGGTGCAACACGCAGGACTACA...ATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACGCCTCAGCCCACGATaGGCAGCGCGAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKRLSPR*AARGAA
Trigger: TGCGGCTCCTCGCGCTGCCCATCGTGGGCTGAGGCG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACTTCCCGCGTGTCGTTaGCAGGCGGCTCCCACGCCG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRLPACR*QAAPTP
Trigger: CGGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACTTCCCGCGTGTCGTTaGCAGGCGGCTCCCACGCCG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKLPACR*QAAPTP
Trigger: CGGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATTGCCCGAGGACCTCGTaGGGAGCCTGGAGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: WSPLPPSSLGDMEFWMLNCPRTS*GAWSVA
Trigger: AGCTACGCTCCAGGCTCCCCACGAGGTCCTCGGGCA...ATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACACCGACTGGTGGGCTaGCCTGTCCCGGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKHRLVG*PVPGPR
Trigger: TCTGGGGCCCGGGACAGGCCAGCCCACCAGTCGGTG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACATGCCACCGACTGGTaGGCTGGCCTGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKHATDW*AGLSRA
Trigger: GGCCCGGGACAGGCCAGCCCACCAGTCGGTGGCATG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGAGCCACGCACATCACCTaGAAGTCGGTGATGATGGAC +
Preference number: 4 (lower is better)
Translates to: SQPGHLCHPQVWATWSSGATHIT*KSVMMD
Trigger: GTCCATCATCACCGACTTCCAGGTGATGTGCGTGGC...TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGGGAGACCTGTGGGATaGGGCCACGGTCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKGRPVG*GHGPAP
Trigger: TGGGGCGGGACCGTGGCCCCATCCCACAGGTCTCCC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGTCAGCTCTGGCCCTTaGGGGTCGGGTGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKVSSGP*GSGVLP
Trigger: GGGCAGCACACCCGACCCTCAAGGGCCAGAGCTGAC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGTCAGCTCTGGCCCTTaGGGGTCGGGTGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRVSSGP*GSGVLP
Trigger: GGGCAGCACACCCGACCCTCAAGGGCCAGAGCTGAC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGCTCCCACGCCGGGCTaGCCTTCACCAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKAPTPG*PSPALR
Trigger: CCGAAGAGCTGGTGAAGGGCAGCCCGGCGTGGGAGC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACTTCCAGCCAGGCGGTaGCGGTCACCGCAGCCGACT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKLPARR*RSPQPT
Trigger: AGTCGGCTGCGGTGACCGGCACCGCCTGGCTGGAAG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACTTCCAGCCAGGCGGTaGCGGTCACCGCAGCCGACT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRLPARR*RSPQPT
Trigger: AGTCGGCTGCGGTGACCGGCACCGCCTGGCTGGAAG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATCGGCAGGAGCCGTTATaGCGCACAAAGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: WSPLPPSSLGDMEFWMLNRQEPL*RTKPLR
Trigger: CCGCAGTGGCTTTGTGCGGCATAACGGCTCCTGCCG...ATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGATTCCCCAGCCGCTGGTaGGCCGGCTTCTTCCCGCGT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRFPSRW*AGFFPR
Trigger: ACGCGGGAAGAAGCCGGCCCACCAGCGGCTGGGGAA...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACAGCATGCCACCGACTaGTGGGCTGGCCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKQHATD*WAGLSR
Trigger: CCGGGACAGGCCAGCCCACCAGTCGGTGGCATGCTG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACTGCCACCCTCAAGTTTaGGCGACATGGAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QFTSKSAWSPLPPSSLGDCHPQV*ATWSSG
Trigger: TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCA...GTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGGCAGGGGGCATGATTaGCTGCCCGAGGACCTCGTG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKGRGHD*LPEDLV
Trigger: CACGAGGTCCTCGGGCAGTCAATCATGCCCCCTGCC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp TGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATGAAGAGGTCGCACACTaGCCGGCAGGAGCCGTTATG +
Preference number: 4 (lower is better)
Translates to: WSPLPPSSLGDMEFWMLNEEVAH*PAGAVM
Trigger: CATAACGGCTCCTGCCGGTCAGTGTGCGACCTCTTC...ATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR TCA 90 bp CAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACTGGTATTCTCCGTCTTaGGCAGGTAGAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QFTSKSAWSPLPPSSLGDWYSPS*AGRASW
Trigger: CCAAGAAGCTCTACCTGCTCAAGACGGAGAATACCA...GTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAACCGCAGCCGACTCCTaGAGCACCTCTTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRTAADS*STSSGP
Trigger: CGGGCCAGAAGAGGTGCTGCAGGAGTCGGCTGCGGT...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAACCGCAGCCGACTCCTaGAGCACCTCTTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKTAADS*STSSGP
Trigger: CGGGCCAGAAGAGGTGCTGCAGGAGTCGGCTGCGGT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCCTGGGCATCGCCGCTaGCCGCCTCTGCGGTCACTC +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPPGHRR*PPLRSL
Trigger: GAGTGACCGCAGAGGCGGGCAGCGGCGATGCCCAGG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACGTCTCCACCTCCTACTaGATCTTTGTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QFTSKSAWSPLPPSSLGDVSTSY*IFVILL
Trigger: GAGGAGGATGACAAAGATGCAGTAGGAGGTGGAGAC...GTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATACCGACCCCAGAGTGTaGTGTGGAGGGACAGCATGC +
Preference number: 4 (lower is better)
Translates to: WSPLPPSSLGDMEFWMLNTDPRV*CGGTAC
Trigger: GCATGCTGTCCCTCCACAGCACACTCTGGGGTCGGT...ATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAACCTCGTGGGGAGCCTaGAGCGTAGCTGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKTSWGA*SVAGRA
Trigger: GGCCCTTCCAGCTACGCTCCAGGCTCCCCACGAGGT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCATGCCACCGACTGGTaGGCTGGCCTGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPHATDW*AGLSRA
Trigger: GGCCCGGGACAGGCCAGCCCACCAGTCGGTGGCATG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AGGTTAAATTATTCTGAAGACAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCAGCATGCCACCGACTaGTGGGCTGGCCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RLNYSEDSSHPSQPGHLCQHATD*WAGLSR
Trigger: CCGGGACAGGCCAGCCCACCAGTCGGTGGCATGCTG...GCAAAGGTGACCAGGCTGACTTGGATGTGAACTGTCTTCAGAATAATTTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGGGAGGGGCGGGCGTTaGCAGAGCCTGGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTGRGGR*QSLARG
Trigger: CCCCCTTGCCAGGCTCTGCCAACGCCCGCCCCTCCC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACACGAGCCCCCACTGTaGAAACAAGCCAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRHEPPL*KQARPG
Trigger: CCCGGGCCTGGCTTGTTTCCACAGTGGGGGCTCGTG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGGGCGGGAGACCTGTaGGATGGGGCCACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTRAGDL*DGATVP
Trigger: CGGGACCGTGGCCCCATCCCACAGGTCTCCCGCCCG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCTTCCAGCCAGGCGGTaGCGGTCACCGCAGCCGACT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPLPARR*RSPQPT
Trigger: AGTCGGCTGCGGTGACCGGCACCGCCTGGCTGGAAG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCTGGGCATCGCCGCTaGCCGCCTCTGCGGTCACTC +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTPGHRR*PPLRSL
Trigger: GAGTGACCGCAGAGGCGGGCAGCGGCGATGCCCAGG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGGGGGCATGATTGACTaGCCGAGGACCTCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKGGMID*PRTSWG
Trigger: TCCCCACGAGGTCCTCGGGCAGTCAATCATGCCCCC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGAGGGTCGGGTGTGCTaGCCCCCAGGTTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKEGRVC*PPGSAK
Trigger: TTTGGCTGAACCTGGGGGGCAGCACACCCGACCCTC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGAGGGTCGGGTGTGCTaGCCCCCAGGTTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHREGRVC*PPGSAK
Trigger: TTTGGCTGAACCTGGGGGGCAGCACACCCGACCCTC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGATGTGGAGGGACAGCATaGCACCGACTGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRCGGTA*HRLVGW
Trigger: CCAGCCCACCAGTCGGTGGCATGCTGTCCCTCCACA...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACGGCAGGAGCCGTTATaGCGCACAAAGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKRQEPL*RTKPLR
Trigger: CCGCAGTGGCTTTGTGCGGCATAACGGCTCCTGCCG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTTCCCCAGCCGCTGGTaGGCCGGCTTCTTCCCGCGT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPFPSRW*AGFFPR
Trigger: ACGCGGGAAGAAGCCGGCCCACCAGCGGCTGGGGAA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGGGGAGTTCAGAAGCTaGGCTCAGCTTGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRGEFRS*AQLVAG
Trigger: CCCGGCGACAAGCTGAGCCCAGCTTCTGAACTCCCC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCACCGACTGGTGGGCTaGCCTGTCCCGGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTHRLVG*PVPGPR
Trigger: TCTGGGGCCCGGGACAGGCCAGCCCACCAGTCGGTG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCATGCCACCGACTGGTaGGCTGGCCTGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTHATDW*AGLSRA
Trigger: GGCCCGGGACAGGCCAGCCCACCAGTCGGTGGCATG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCAGCATGCCACCGACTaGTGGGCTGGCCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPQHATD*WAGLSR
Trigger: CCGGGACAGGCCAGCCCACCAGTCGGTGGCATGCTG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGAGCAGGTAGAGCTTCTTaGCAAAGAACACCGTCATCA +
Preference number: 4 (lower is better)
Translates to: SQPGHLCHPQVWATWSSGAGRAS*QRTPSS
Trigger: TGATGACGGTGTTCTTTGCCAAGAAGCTCTACCTGC...TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGTGACGCCGGCCCCTTaGTCAGCCTGCCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPVTPAP*SACQGN
Trigger: GTTCCCCTGGCAGGCTGACCAAGGGGCCGGCGTCAC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGGCAGGGGGCATGATTaGCTGCCCGAGGACCTCGTG +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPGRGHD*LPEDLV
Trigger: CACGAGGTCCTCGGGCAGTCAATCATGCCCCCTGCC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGAATGGCAGGGGGCATaGTTGACTGCCCGAGGACCT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKEWQGA*LTARGP
Trigger: AGGTCCTCGGGCAGTCAATCATGCCCCCTGCCATTC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGTCAGCTCTGGCCCTTaGGGGTCGGGTGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTVSSGP*GSGVLP
Trigger: GGGCAGCACACCCGACCCTCAAGGGCCAGAGCTGAC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGAAGAGGTCGCACACTaGCCGGCAGGAGCCGTTATG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKEEVAH*PAGAVM
Trigger: CATAACGGCTCCTGCCGGTCAGTGTGCGACCTCTTC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGCTCCCACGCCGGGCTaGCCTTCACCAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTAPTPG*PSPALR
Trigger: CCGAAGAGCTGGTGAAGGGCAGCCCGGCGTGGGAGC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTCCTGGGCATCGCCGCTaGCCGCCTCTGCGGTCACTC +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPPGHRR*PPLRSL
Trigger: GAGTGACCGCAGAGGCGGGCAGCGGCGATGCCCAGG...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAACCGACCCCAGAGTGTaGTGTGGAGGGACAGCATGC +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKTDPRV*CGGTAC
Trigger: GCATGCTGTCCCTCCACAGCACACTCTGGGGTCGGT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGCGTTAGGCGGCAGGTaGACGGGCGGGAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTALGGR*TGGRPV
Trigger: CACAGGTCTCCCGCCCGTGCACCTGCCGCCTAACGC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCCCCGTCCCGGAGTCTaGCCCCAAGACGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPPRPGV*PQDEDH
Trigger: GTGATCCTCGTCTTGGGGGCAGACTCCGGGACGGGG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000456150.5
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTCGCCTCAGCCCACGATaGGCAGCGCGAGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPRLSPR*AARGAA
Trigger: TGCGGCTCCTCGCGCTGCCCATCGTGGGCTGAGGCG...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTCTTCCCGCGTGTCGTTaGCAGGCGGCTCCCACGCCG +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPLPACR*QAAPTP
Trigger: CGGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAG...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTGCCCGAGGACCTCGTaGGGAGCCTGGAGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPCPRTS*GAWSVA
Trigger: AGCTACGCTCCAGGCTCCCCACGAGGTCCTCGGGCA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AGGTTAAATTATTCTGAAGACAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCGGGGAGTTCAGAAGCTaGGCTCAGCTTGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RLNYSEDSSHPSQPGHLCGEFRS*AQLVAG
Trigger: CCCGGCGACAAGCTGAGCCCAGCTTCTGAACTCCCC...GCAAAGGTGACCAGGCTGACTTGGATGTGAACTGTCTTCAGAATAATTTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
3UTR CAA 72 bp TCCAAGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTaGGGCGACATGGAGTTCTGGATGTTAAATGACTCC +
Preference number: 4 (lower is better)
Translates to: SKSAWSPLPPSS*GDMEFWMLNDS
Trigger: GGAGTCATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR TCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGTCAGCTCTGGCCCTTaGGGGTCGGGTGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPVSSGP*GSGVLP
Trigger: GGGCAGCACACCCGACCCTCAAGGGCCAGAGCTGAC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGCTCCCACGCCGGGCTaGCCTTCACCAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPAPTPG*PSPALR
Trigger: CCGAAGAGCTGGTGAAGGGCAGCCCGGCGTGGGAGC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGGGGGCATGATTGACTaGCCGAGGACCTCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPGGMID*PRTSWG
Trigger: TCCCCACGAGGTCCTCGGGCAGTCAATCATGCCCCC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AATTATTCTGAAGACAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCACCCTCACTGCGGCACTCAGTaGCATTTTCACTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NYSEDSSHPSQPGHLCHPHCGTQ*HFHWRP
Trigger: TGGCCTCCAGTGAAAATGGCACTGAGTGCCGCAGTG...AGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTGTCTTCAGAATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACAGCCTGGTCACCTTTaGCACCCTCAAGTTTGGGCG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRQPGHL*HPQVWA
Trigger: CGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACAGCCTGGTCACCTTTaGCACCCTCAAGTTTGGGCG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKQPGHL*HPQVWA
Trigger: CGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAACGCACCAGGAGGTCTaGTTAGTCGGCAGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKTHQEV*LVGRRN
Trigger: GTTCCTCCTGCCGACTAAGCAGACCTCCTGGTGCGT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTTTCCCCAGCCGCTGGTaGGCCGGCTTCTTCCCGCGT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPFPSRW*AGFFPR
Trigger: ACGCGGGAAGAAGCCGGCCCACCAGCGGCTGGGGAA...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCTGCCCGAGGACCTCGTaGGGAGCCTGGAGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTCPRTS*GAWSVA
Trigger: AGCTACGCTCCAGGCTCCCCACGAGGTCCTCGGGCA...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAATGGGTAAGTCAGCTCTaGCCCTTGAGGGTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKWVSQL*PLRVGC
Trigger: ACACCCGACCCTCAAGGGCCAGAGCTGACTTACCCA...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACAGGGTGCCCTGAAATaGGTAAGTCAGCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKQGALK*VSQLWP
Trigger: GGGCCAGAGCTGACTTACCCATTTCAGGGCACCCTG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATCCCTCAGTATCAGGGTaGTTCTCTGAGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: WSPLPPSSLGDMEFWMLNPSVSG*FSEVPG
Trigger: ACCAGGAACCTCAGAGAACCACCCTGATACTGAGGG...ATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTCAGCATGCCACCGACTaGTGGGCTGGCCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPQHATD*WAGLSR
Trigger: CCGGGACAGGCCAGCCCACCAGTCGGTGGCATGCTG...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AATTATTCTGAAGACAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCACCCTCAGTGCCATTTTCACTaGAGGCCAAGTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NYSEDSSHPSQPGHLCHPQCHFH*RPSPCL
Trigger: CAGGCAGGGACTTGGCCTCCAGTGAAAATGGCACTG...AGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTGTCTTCAGAATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCAGGCCCGGGGCGCATaGAGCCTCTCGGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTQARGA*SLSDSA
Trigger: TGCAGAATCCGAGAGGCTCCATGCGCCCCGGGCCTG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGAATGGCAGGGGGCATaGTTGACTGCCCGAGGACCT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPEWQGA*LTARGP
Trigger: AGGTCCTCGGGCAGTCAATCATGCCCCCTGCCATTC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGAAGAGGTCGCACACTaGCCGGCAGGAGCCGTTATG +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPEEVAH*PAGAVM
Trigger: CATAACGGCTCCTGCCGGTCAGTGTGCGACCTCTTC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGGATCATCATTTGGGTaGGAGCCCTCGGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRGSSFG*EPSAMV
Trigger: CACCATTGCCGAGGGCTCTCACCCAAATGATGATCC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264723.9
ENST00000456150.5
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGGGGGCATGATTGACTaGCCGAGGACCTCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTGGMID*PRTSWG
Trigger: TCCCCACGAGGTCCTCGGGCAGTCAATCATGCCCCC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGAGGGTCGGGTGTGCTaGCCCCCAGGTTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTEGRVC*PPGSAK
Trigger: TTTGGCTGAACCTGGGGGGCAGCACACCCGACCCTC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGTTGGGGCTCCAGGGTaGCCTGAAATGGGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRVGAPG*PEMGKS
Trigger: TGACTTACCCATTTCAGGGCACCCTGGAGCCCCAAC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGTTGGGGCTCCAGGGTaGCCTGAAATGGGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKVGAPG*PEMGKS
Trigger: TGACTTACCCATTTCAGGGCACCCTGGAGCCCCAAC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCTGTGGAGGGACAGCATaGCACCGACTGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTCGGTA*HRLVGW
Trigger: CCAGCCCACCAGTCGGTGGCATGCTGTCCCTCCACA...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCACCGACCCCAGAGTGTaGTGTGGAGGGACAGCATGC +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPTDPRV*CGGTAC
Trigger: GCATGCTGTCCCTCCACAGCACACTCTGGGGTCGGT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACACTGCGGCACTCAGTaGCATTTTCACTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRHCGTQ*HFHWRP
Trigger: TGGCCTCCAGTGAAAATGGCACTGAGTGCCGCAGTG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACACTGCGGCACTCAGTaGCATTTTCACTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKHCGTQ*HFHWRP
Trigger: TGGCCTCCAGTGAAAATGGCACTGAGTGCCGCAGTG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGCCGCACAAAGCCACTaGGGCACTCAGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRAAQSH*GTQCHF
Trigger: AAAATGGCACTGAGTGCCGCAGTGGCTTTGTGCGGC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGCCGCACAAAGCCACTaGGGCACTCAGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKAAQSH*GTQCHF
Trigger: AAAATGGCACTGAGTGCCGCAGTGGCTTTGTGCGGC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGGCAGGAGCCGTTATaGCGCACAAAGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTRQEPL*RTKPLR
Trigger: CCGCAGTGGCTTTGTGCGGCATAACGGCTCCTGCCG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACCTGCGTGTTGCACCTaGAGAAGGCCCCTATGTTCT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRPACCT*RRPLCS
Trigger: AGAACATAGGGGCCTTCTGCAGGTGCAACACGCAGG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACCTGCGTGTTGCACCTaGAGAAGGCCCCTATGTTCT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKPACCT*RRPLCS
Trigger: AGAACATAGGGGCCTTCTGCAGGTGCAACACGCAGG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAATGTAGTCCTGCGTGTTaGACCTGCAGAAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKCSPAC*TCRRPL
Trigger: TAGGGGCCTTCTGCAGGTGCAACACGCAGGACTACA...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCTCGTGGGGAGCCTaGAGCGTAGCTGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPTSWGA*SVAGRA
Trigger: GGCCCTTCCAGCTACGCTCCAGGCTCCCCACGAGGT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTTGCCCGAGGACCTCGTaGGGAGCCTGGAGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPCPRTS*GAWSVA
Trigger: AGCTACGCTCCAGGCTCCCCACGAGGTCCTCGGGCA...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACAGTGCCATTTTCACTaGAGGCCAAGTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKQCHFH*RPSPCL
Trigger: CAGGCAGGGACTTGGCCTCCAGTGAAAATGGCACTG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACAGTGCCATTTTCACTaGAGGCCAAGTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRQCHFH*RPSPCL
Trigger: CAGGCAGGGACTTGGCCTCCAGTGAAAATGGCACTG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGCCACGCACATCACCTaGAAGTCGGTGATGATGGAC +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKATHIT*KSVMMD
Trigger: GTCCATCATCACCGACTTCCAGGTGATGTGCGTGGC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCCTCAACTCGGGTTGTaGCTGTCAGAGCGGCCTACC +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPPQLGL*LSERPT
Trigger: GGTAGGCCGCTCTGACAGCCACAACCCGAGTTGAGG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACCAGCCGGGCACACATaGATGCTTGGCTTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRPAGHT*MLGFRV
Trigger: CACTCTAAAGCCAAGCATCCATGTGTGCCCGGCTGG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGATGTCAATGATATCTaGTGCCGGTTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKDVNDI*CRLGLQ
Trigger: CTGGAGCCCCAACCGGCATCAGATATCATTGACATC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAAGAACACCGTCATCATaGAGAGCAGGAGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKRTPSS*RAGAGR
Trigger: TCGTCCTGCTCCTGCTCTTCATGATGACGGTGTTCT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTCCTCCTTCCCTTCCTaGGGCCAGTCTGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPSSFPS*GQSVWE
Trigger: TTCCCACACAGACTGGCCTCAGGAAGGGAAGGAGGA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGGACTGCAAGGCACTTaGGTGCACAGGGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPGLQGT*VHRAGN
Trigger: GTTACCAGCCCTGTGCACTCAAGTGCCTTGCAGTCC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCACCGACCCCAGAGTGTaGTGTGGAGGGACAGCATGC +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTTDPRV*CGGTAC
Trigger: GCATGCTGTCCCTCCACAGCACACTCTGGGGTCGGT...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCAGCCTGGTCACCTTTaGCACCCTCAAGTTTGGGCG +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPQPGHL*HPQVWA
Trigger: CGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGATGCAAGGCACTTGAGTaGACAGGGCTGGTAACAGAG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRCKALE*TGLVTE
Trigger: CTCTGTTACCAGCCCTGTGCACTCAAGTGCCTTGCA...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGGGGAGTTCAGAAGCTaGGCTCAGCTTGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPGEFRS*AQLVAG
Trigger: CCCGGCGACAAGCTGAGCCCAGCTTCTGAACTCCCC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACCCTCAGTATCAGGGTaGTTCTCTGAGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRPSVSG*FSEVPG
Trigger: ACCAGGAACCTCAGAGAACCACCCTGATACTGAGGG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGAGAGCCCTCGGCAATaGTGGAGAGGGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRESPRQ*WRGRSY
Trigger: ATAACTTCTCCCTCTCCACCATTGCCGAGGGCTCTC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGAGAGCCCTCGGCAATaGTGGAGAGGGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKESPRQ*WRGRSY
Trigger: ATAACTTCTCCCTCTCCACCATTGCCGAGGGCTCTC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp TGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATGGCGACATGGAGTTCTaGATGTTAAATGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: WSPLPPSSLGDMEFWMLNGDMEF*MLNDSS
Trigger: GGAGGAGTCATTTAACATCCAGAACTCCATGTCGCC...ATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGATGCCACCCTCAAGTTTaGGCGACATGGAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRCHPQV*ATWSSG
Trigger: TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCA...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAATGCCACCCTCAAGTTTaGGCGACATGGAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKCHPQV*ATWSSG
Trigger: TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCA...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAACATCCAAGTCAGCCTaGTCACCTTTGCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRTSKSA*SPLPPS
Trigger: TGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGT...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGGGTTCCTTGATGTCTaGGGCATGACAACCACTCAC +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKGFLDV*GMTTTH
Trigger: GTGAGTGGTTGTCATGCCCCAGACATCAAGGAACCC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp TGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATACCTCCTGGATTTTGTaGGGAGCACTAGGATCATCT +
Preference number: 4 (lower is better)
Translates to: WSPLPPSSLGDMEFWMLNTSWIL*GALGSS
Trigger: AGATGATCCTAGTGCTCCCCACAAAATCCAGGAGGT...ATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR TCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGAAGAGGTCGCACACTaGCCGGCAGGAGCCGTTATG +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPEEVAH*PAGAVM
Trigger: CATAACGGCTCCTGCCGGTCAGTGTGCGACCTCTTC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp AGGTTAAATTATTCTGAAGACAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCAGAACACCGTCATCATaGAGAGCAGGAGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: RLNYSEDSSHPSQPGHLCRTPSS*RAGAGR
Trigger: TCGTCCTGCTCCTGCTCTTCATGATGACGGTGTTCT...GCAAAGGTGACCAGGCTGACTTGGATGTGAACTGTCTTCAGAATAATTTAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR TCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGATGGTATTCTCCGTCTTaGGCAGGTAGAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRWYSPS*AGRASW
Trigger: CCAAGAAGCTCTACCTGCTCAAGACGGAGAATACCA...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGTTGGGGCTCCAGGGTaGCCTGAAATGGGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPVGAPG*PEMGKS
Trigger: TGACTTACCCATTTCAGGGCACCCTGGAGCCCCAAC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTGTAGTCCTGCGTGTTaGACCTGCAGAAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPCSPAC*TCRRPL
Trigger: TAGGGGCCTTCTGCAGGTGCAACACGCAGGACTACA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACCCTCTCTTCTTGCTCTaGTTTAGGTTAAATTATTCT +
Preference number: 4 (lower is better)
Translates to: QFTSKSAWSPLPPSSLGDPLFLL*FRLNYS
Trigger: AGAATAATTTAACCTAAAGCAGAGCAAGAAGAGAGG...GTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGAGCCTCTCGGATTCTaGACCAATCCCGTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTEPLGF*TNPVFR
Trigger: CCGGAACACGGGATTGGTGCAGAATCCGAGAGGCTC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGACCAGGCTTCCCAGTaGGCACTAGAAGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKDQASQ*ALEAHF
Trigger: AAAATGAGCTTCTAGTGCCCACTGGGAAGCCTGGTC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCAGTGCCATTTTCACTaGAGGCCAAGTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPQCHFH*RPSPCL
Trigger: CAGGCAGGGACTTGGCCTCCAGTGAAAATGGCACTG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGGGTCCGGAATTTGTTaGTCCTACGCAGCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRGSGIC*SYAAWY
Trigger: ATACCAAGCTGCGTAGGACCAACAAATTCCGGACCC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGAGAAGTTATCATTGTaGAGCTCAGATGGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHREKLSL*SSDGVR
Trigger: CCGGACCCCATCTGAGCTCCACAATGATAACTTCTC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAAGCCCTCGGCAATGGTaGAGAGGGAGAAGTTATCAT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKSPRQW*RGRSYH
Trigger: ATGATAACTTCTCCCTCTCCACCATTGCCGAGGGCT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTAGTCTCCGGGCAGCCTaGGGAGCGGCCTTTAATCCT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPSLRAA*GAAFNP
Trigger: AGGATTAAAGGCCGCTCCCCAGGCTGCCCGGAGACT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAAGTAGTCGATGTCAATaGTATCTGATGCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKSSRCQ*YLMPVG
Trigger: CCCAACCGGCATCAGATATCATTGACATCGACTACT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCAGAACACCGTCATCATaGAGAGCAGGAGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPRTPSS*RAGAGR
Trigger: TCGTCCTGCTCCTGCTCTTCATGATGACGGTGTTCT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGGATCATCATTTGGGTaGGAGCCCTCGGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTGSSFG*EPSAMV
Trigger: CACCATTGCCGAGGGCTCTCACCCAAATGATGATCC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264723.9
ENST00000456150.5
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACTTTCAGGCAGGACTTaGGAACCTCCTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKLSGRT*EPPGFC
Trigger: ACAAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAATCAGACAGGCATAAATaGACGAATGGCAACCACCCA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKSDRHK*TNGNHP
Trigger: TGGGTGGTTGCCATTCGTTCATTTATGCCTGTCTGA...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGATCACCTTTCCCTCTATaGAGGCTTCTCAGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRSPFPL*RLLSSY
Trigger: GTAACTGCTGAGAAGCCTTCATAGAGGGAAAGGTGA...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCACTGCGGCACTCAGTaGCATTTTCACTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTHCGTQ*HFHWRP
Trigger: TGGCCTCCAGTGAAAATGGCACTGAGTGCCGCAGTG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCCTCCAACCCATCTCTaGTTCCCTTGTGTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPPPTHL*FPCVQL
Trigger: AAGCTGCACACAAGGGAAGCAGAGATGGGTTGGAGG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTTGGGTAAGTCAGCTCTaGCCCTTGAGGGTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPWVSQL*PLRVGC
Trigger: ACACCCGACCCTCAAGGGCCAGAGCTGACTTACCCA...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTCAGGGTGCCCTGAAATaGGTAAGTCAGCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPQGALK*VSQLWP
Trigger: GGGCCAGAGCTGACTTACCCATTTCAGGGCACCCTG...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGCCACGCACATCACCTaGAAGTCGGTGATGATGGAC +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTATHIT*KSVMMD
Trigger: GTCCATCATCACCGACTTCCAGGTGATGTGCGTGGC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGCAGGTAGAGCTTCTTaGCAAAGAACACCGTCATCA +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRAGRAS*QRTPSS
Trigger: TGATGACGGTGTTCTTTGCCAAGAAGCTCTACCTGC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAATTGTGGAGCTCAGATaGGGTCCGGAATTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKIVELR*GPEFVG
Trigger: ACCAACAAATTCCGGACCCCATCTGAGCTCCACAAT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGACTTGAGAACCTCCTaGATTTTGTGGGGAGCACTA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKDLRTS*ILWGAL
Trigger: TAGTGCTCCCCACAAAATCCAGGAGGTTCTCAAGTC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGGCGACATGGAGTTCTaGATGTTAAATGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKGDMEF*MLNDSS
Trigger: GGAGGAGTCATTTAACATCCAGAACTCCATGTCGCC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCACATCCAAGTCAGCCTaGTCACCTTTGCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPTSKSA*SPLPPS
Trigger: TGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGTTCTGGATGTTAAATaGCTCCTCCTCTTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRVLDVK*LLLFQA
Trigger: TGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAAC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGATTGATGTCTGGGGCATaGCAACCACTCACACATTTT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRLMSGA*QPLTHF
Trigger: AAAATGTGTGAGTGGTTGTCATGCCCCAGACATCAA...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCTTCCTTACATTTGGGTaGGAGCCCTCGGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTFLTFG*EPSAMV
Trigger: CACCATTGCCGAGGGCTCTCACCCAAATGTAAGGAA...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGTCTCCACCTCCTACTaGATCTTTGTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPVSTSY*IFVILL
Trigger: GAGGAGGATGACAAAGATGCAGTAGGAGGTGGAGAC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTCCTGCGTGTTGCACCTaGAGAAGGCCCCTATGTTCT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPPACCT*RRPLCS
Trigger: AGAACATAGGGGCCTTCTGCAGGTGCAACACGCAGG...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTTGTAGTCCTGCGTGTTaGACCTGCAGAAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPCSPAC*TCRRPL
Trigger: TAGGGGCCTTCTGCAGGTGCAACACGCAGGACTACA...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCAACGCACCCTTAACTaGCTCCAACCCATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTQRTLN*LQPISA
Trigger: AGCAGAGATGGGTTGGAGGCAGTTAAGGGTGCGTTG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCCTCAGTATCAGGGTaGTTCTCTGAGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTPSVSG*FSEVPG
Trigger: ACCAGGAACCTCAGAGAACCACCCTGATACTGAGGG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGACCAGGCTTCCCAGTaGGCACTAGAAGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPDQASQ*ALEAHF
Trigger: AAAATGAGCTTCTAGTGCCCACTGGGAAGCCTGGTC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGCCACGCACATCACCTaGAAGTCGGTGATGATGGAC +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPATHIT*KSVMMD
Trigger: GTCCATCATCACCGACTTCCAGGTGATGTGCGTGGC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCAGCCCTCGGCAATGGTaGAGAGGGAGAAGTTATCAT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPSPRQW*RGRSYH
Trigger: ATGATAACTTCTCCCTCTCCACCATTGCCGAGGGCT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGAGAGCCCTCGGCAATaGTGGAGAGGGAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTESPRQ*WRGRSY
Trigger: ATAACTTCTCCCTCTCCACCATTGCCGAGGGCTCTC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAACAGTTATTCCTCACTaGACTGCAAGGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRTVIPH*TARHLS
Trigger: ACTCAAGTGCCTTGCAGTCCAGTGAGGAATAACTGT...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGATGTCAATGATATCTaGTGCCGGTTGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPDVNDI*CRLGLQ
Trigger: CTGGAGCCCCAACCGGCATCAGATATCATTGACATC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCAGTAGTCGATGTCAATaGTATCTGATGCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPSSRCQ*YLMPVG
Trigger: CCCAACCGGCATCAGATATCATTGACATCGACTACT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCTTTCAGGCAGGACTTaGGAACCTCCTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPLSGRT*EPPGFC
Trigger: ACAAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTCATGGATGGGTTCCTTaGTGTCTGGGGCATGACAAC +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPHGWVP*CLGHDN
Trigger: GTTGTCATGCCCCAGACATCAAGGAACCCATCCATG...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGTCTCCACCTCCTACTaGATCTTTGTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTVSTSY*IFVILL
Trigger: GAGGAGGATGACAAAGATGCAGTAGGAGGTGGAGAC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGACCATGTAGGGCTTTaGACTCACCTCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPDHVGL*THLSHR
Trigger: TCTGTGGCTGAGGTGAGTGCAAAGCCCTACATGGTC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAATCTCCAGATGGAGTTaGCTTGGTTCAAAACCTGTT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKISRWS*LGSKPV
Trigger: AACAGGTTTTGAACCAAGGCAACTCCATCTGGAGAT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAGGTACGGGGAGTGTTaGAAAGTTTCCTTACATTTG +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRRYGEC*KVSLHL
Trigger: CAAATGTAAGGAAACTTTGCAACACTCCCCGTACCT...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGACCAGGCTTCCCAGTaGGCACTAGAAGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTDQASQ*ALEAHF
Trigger: AAAATGAGCTTCTAGTGCCCACTGGGAAGCCTGGTC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGGGTCCGGAATTTGTTaGTCCTACGCAGCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTGSGIC*SYAAWY
Trigger: ATACCAAGCTGCGTAGGACCAACAAATTCCGGACCC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCATTGTGGAGCTCAGATaGGGTCCGGAATTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPIVELR*GPEFVG
Trigger: ACCAACAAATTCCGGACCCCATCTGAGCTCCACAAT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGAGAAGTTATCATTGTaGAGCTCAGATGGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTEKLSL*SSDGVR
Trigger: CCGGACCCCATCTGAGCTCCACAATGATAACTTCTC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCACTAGGATCATCATTTaGGTGAGAGCCCTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPTRIII*VRALGN
Trigger: ATTGCCGAGGGCTCTCACCCAAATGATGATCCTAGT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264723.9
ENST00000456150.5
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCACCTCCTGGATTTTGTaGGGAGCACTAGGATCATCA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPTSWIL*GALGSS
Trigger: TGATGATCCTAGTGCTCCCCACAAAATCCAGGAGGT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264723.9
ENST00000456150.5
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGACTTGAGAACCTCCTaGATTTTGTGGGGAGCACTA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPDLRTS*ILWGAL
Trigger: TAGTGCTCCCCACAAAATCCAGGAGGTTCTCAAGTC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGGCGACATGGAGTTCTaGATGTTAAATGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPGDMEF*MLNDSS
Trigger: GGAGGAGTCATTTAACATCCAGAACTCCATGTCGCC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACATCCAAGTCAGCCTaGTCACCTTTGCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPTSKSA*SPLPPS
Trigger: TGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACAGATGGAGTTGCCTTaGTTCAAAACCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRQMELP*FKTCFS
Trigger: TGAGAAACAGGTTTTGAACCAAGGCAACTCCATCTG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCAGTAGTCGATGTCAATaGTATCTGATGCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTSSRCQ*YLMPVG
Trigger: CCCAACCGGCATCAGATATCATTGACATCGACTACT...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAATTCATCGAAGGGGGTaGAATCATCGTATAAGTCAA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKIHRRG*NHRISQ
Trigger: TTGACTTATACGATGATTTCACCCCCTTCGATGAAT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTTGGTATTCTCCGTCTTaGGCAGGTAGAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPWYSPS*AGRASW
Trigger: CCAAGAAGCTCTACCTGCTCAAGACGGAGAATACCA...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGTTCTGGATGTTAAATaGCTCCTCCTCTTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPVLDVK*LLLFQA
Trigger: TGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAAC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCTGTTACTCACCCAAATaGCAGTTCAGGGTATCAGCC +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTCYSPK*QFRVSA
Trigger: GGCTGATACCCTGAACTGTCATTTGGGTGAGTAACA...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGTCTCCACCTCCTACTaGATCTTTGTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPVSTSY*IFVILL
Trigger: GAGGAGGATGACAAAGATGCAGTAGGAGGTGGAGAC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTCTCTGTGTTCCTTTaGTTGTTTCCTCAACTCGGG +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTLSVFL*LFPQLG
Trigger: CCCGAGTTGAGGAAACAAGCAAAGGAACACAGAGAG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTTCATAGTTTCATGCTaGCTCCGGGGACCAAGTAAA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPFIVSC*LRGPSK
Trigger: TTTACTTGGTCCCCGGAGGCAGCATGAAACTATGAA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCTCTTTCATAGTTTCATaGTGCCTCCGGGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTSFIVS*CLRGPS
Trigger: ACTTGGTCCCCGGAGGCAGCATGAAACTATGAAAGA...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGACCAGGCTTCCCAGTaGGCACTAGAAGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPDQASQ*ALEAHF
Trigger: AAAATGAGCTTCTAGTGCCCACTGGGAAGCCTGGTC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGCAGGTAGAGCTTCTTaGCAAAGAACACCGTCATCA +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTAGRAS*QRTPSS
Trigger: TGATGACGGTGTTCTTTGCCAAGAAGCTCTACCTGC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTAGCCCTCGGCAATGGTaGAGAGGGAGAAGTTATCAT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPSPRQW*RGRSYH
Trigger: ATGATAACTTCTCCCTCTCCACCATTGCCGAGGGCT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTTCTCAGCAGAACTATaGCTGCAGCCTATTTGCCTA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPFSAEL*LQPICL
Trigger: TAGGCAAATAGGCTGCAGCCATAGTTCTGCTGAGAA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCTCCTGGATTTTGTaGGGAGCACTAGGATCATCC +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPTSWIL*GALGSS
Trigger: GGATGATCCTAGTGCTCCCCACAAAATCCAGGAGGT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGCACTAGGATCATCTTaGTCCTACGCAGCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTALGSS*SYAAWY
Trigger: ATACCAAGCTGCGTAGGACCAAGATGATCCTAGTGC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR TCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTCTTTCAGGCAGGACTTaGGAACCTCCTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPLSGRT*EPPGFC
Trigger: ACAAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAG...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGTTCTGGATGTTAAATaGCTCCTCCTCTTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTVLDVK*LLLFQA
Trigger: TGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAAC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTTATTCCTCACTGGACTaGAAGGCACTTGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPYSSLD*KALECT
Trigger: TGTGCACTCAAGTGCCTTGCAGTCCAGTGAGGAATA...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACATAAAAGGATGTGGTaGGGTAGAAATCAGATTCAT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRHKRMW*GRNQIH
Trigger: ATGAATCTGATTTCTACCCCACCACATCCTTTTATG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGCAGGTAGAGCTTCTTaGCAAAGAACACCGTCATCA +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPAGRAS*QRTPSS
Trigger: TGATGACGGTGTTCTTTGCCAAGAAGCTCTACCTGC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACTAGGATCATCATTTaGGTGAGAGCCCTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPTRIII*VRALGN
Trigger: ATTGCCGAGGGCTCTCACCCAAATGATGATCCTAGT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264723.9
ENST00000456150.5
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGACTTGAGAACCTCCTaGATTTTGTGGGGAGCACTA +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPDLRTS*ILWGAL
Trigger: TAGTGCTCCCCACAAAATCCAGGAGGTTCTCAAGTC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAATACATATCTCCAGATaGAGTTGCCTTGGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKIHISR*SCLGSK
Trigger: TTTTGAACCAAGGCAACTCCATCTGGAGATATGTAT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCATTCATCGAAGGGGGTaGAATCATCGTATAAGTCAA +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPIHRRG*NHRISQ
Trigger: TTGACTTATACGATGATTTCACCCCCTTCGATGAAT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGTTCTGGATGTTAAATaGCTCCTCCTCTTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPVLDVK*LLLFQA
Trigger: TGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAAC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACCTCTCTTCTTGCTCTaGTTTAGGTTAAATTATTCT +
Preference number: 4 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKPLFLL*FRLNYS
Trigger: AGAATAATTTAACCTAAAGCAGAGCAAGAAGAGAGG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACCTCTCTTCTTGCTCTaGTTTAGGTTAAATTATTCT +
Preference number: 4 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRPLFLL*FRLNYS
Trigger: AGAATAATTTAACCTAAAGCAGAGCAAGAAGAGAGG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCAAGAGACGGTCCCATTaGTGTCTTAGAAGACCAAAT +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTKRRSH*CLRRPN
Trigger: ATTTGGTCTTCTAAGACAGCAATGGGACCGTCTCTT...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CCA 90 bp AGGTTAAATTATTCTGAAGACAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCATAAAAGGATGTGGTaGGGTAGAAATCAGATTCAT +
Preference number: 4 (lower is better)
Translates to: RLNYSEDSSHPSQPGHLCHKRMW*GRNQIH
Trigger: ATGAATCTGATTTCTACCCCACCACATCCTTTTATG...GCAAAGGTGACCAGGCTGACTTGGATGTGAACTGTCTTCAGAATAATTTAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTAAGTTTCCTTACATTTaGGTGAGAGCCCTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPKFPYI*VRALGN
Trigger: ATTGCCGAGGGCTCTCACCCAAATGTAAGGAAACTT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCATTCATCGAAGGGGGTaGAATCATCGTATAAGTCAA +
Preference number: 4 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTIHRRG*NHRISQ
Trigger: TTGACTTATACGATGATTTCACCCCCTTCGATGAAT...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCATAAAAGGATGTGGTaGGGTAGAAATCAGATTCAT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPHKRMW*GRNQIH
Trigger: ATGAATCTGATTTCTACCCCACCACATCCTTTTATG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR TCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTATTCATCGAAGGGGGTaGAATCATCGTATAAGTCAA +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPIHRRG*NHRISQ
Trigger: TTGACTTATACGATGATTTCACCCCCTTCGATGAAT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCCTCTCTTCTTGCTCTaGTTTAGGTTAAATTATTCT +
Preference number: 4 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPPLFLL*FRLNYS
Trigger: AGAATAATTTAACCTAAAGCAGAGCAAGAAGAGAGG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR GCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTCTGGTAAACTCCTCATaGCAGAAAAACTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPLVNSS*QKNSVL
Trigger: AAGAACTGAGTTTTTCTGGCATGAGGAGTTTACCAG...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR TCA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTAGAAGACCAAATAAGTaGCCAAGATGGAGATTCTAT +
Preference number: 4 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPRRPNK*PRWRFY
Trigger: ATAGAATCTCCATCTTGGTCACTTATTTGGTCTTCT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 90 bp GCGCGAGGCAGGCGCACGGCGCGGCGCGCGGCGTTAGGCGGCAGGTaGACGGGCGGGAGACCTGTGGGATGGGGCCACGGTCCCGCCCCA +
Preference number: 5 (lower is better)
Translates to: ARGRRTARRAALGGR*TGGRPVGWGHGPAP
Trigger: TGGGGCGGGACCGTGGCCCCATCCCACAGGTCTCCCGCCCGTGCACCTGCCGCCTAACGCCGCGCGCCGCGCCGTGCGCCTGCCTCGCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 90 bp CGCGCGGCGTTAGGCGGCAGGTGCACGGGCGGGAGACCTGTGGGATaGGGCCACGGTCCCGCCCCAGGTGAACAGGCGGCACGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: RAALGGRCTGGRPVG*GHGPAPGEQAARGP
Trigger: GGGGCCCCGTGCCGCCTGTTCACCTGGGGCGGGACCGTGGCCCCATCCCACAGGTCTCCCGCCCGTGCACCTGCCGCCTAACGCCGCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 90 bp CCCACGCCGGGCTGCCCTTCACCAGCTCTTCGGCCTCAACCGCGCTaGCCGCCTCACGCGCTGCGGGCGGGAGGGCAAGGGGCGGGACGT +
Preference number: 5 (lower is better)
Translates to: PTPGCPSPALRPQPR*PPHALRAGGQGAGR
Trigger: ACGTCCCGCCCCTTGCCCTCCCGCCCGCAGCGCGTGAGGCGGGCAGCGCGGTTGAGGCCGAAGAGCTGGTGAAGGGCAGCCCGGCGTGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456150.5
CDS CCA 90 bp GCCACCGGGCGCCGTCCACGACGCCTCATCTTCCCCAGCCGCTGGTaGGCCGGCTTCTTCCCGCGTGTCGTTGGCAGGCGGCTCCCACGC +
Preference number: 5 (lower is better)
Translates to: ATGRRPRRLIFPSRW*AGFFPRVVGRRLPR
Trigger: GCGTGGGAGCCGCCTGCCAACGACACGCGGGAAGAAGCCGGCCCACCAGCGGCTGGGGAAGATGAGGCGTCGTGGACGGCGCCCGGTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS CCA 90 bp CCAGGCGGTGCCGGTCACCGCAGCCGACTCCTGCAGCACCTCTTCTaGCCCGGCCAGCTCGCCACCGGGCGCCGTCCACGACGCCTCATC +
Preference number: 5 (lower is better)
Translates to: PGGAGHRSRLLQHLF*PGQLATGRRPRRLI
Trigger: GATGAGGCGTCGTGGACGGCGCCCGGTGGCGAGCTGGCCGGGCCAGAAGAGGTGCTGCAGGAGTCGGCTGCGGTGACCGGCACCGCCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS GCA 90 bp CTGTCAGCTTCCAGCCAGGCGGTGCCGGTCACCGCAGCCGACTCCTaGAGCACCTCTTCTGGCCCGGCCAGCTCGCCACCGGGCGCCGTC +
Preference number: 5 (lower is better)
Translates to: LSASSQAVPVTAADS*STSSGPASSPPGAV
Trigger: GACGGCGCCCGGTGGCGAGCTGGCCGGGCCAGAAGAGGTGCTGCAGGAGTCGGCTGCGGTGACCGGCACCGCCTGGCTGGAAGCTGACAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS CCA 90 bp CTCGCCACCGGGCGCCGTCCACGACGCCTCATCTTCCCCAGCCGCTaGTGGGCCGGCTTCTTCCCGCGTGTCGTTGGCAGGCGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LATGRRPRRLIFPSR*WAGFFPRVVGRRLP
Trigger: TGGGAGCCGCCTGCCAACGACACGCGGGAAGAAGCCGGCCCACCAGCGGCTGGGGAAGATGAGGCGTCGTGGACGGCGCCCGGTGGCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS GCA 90 bp CGGCTTCTTCCCGCGTGTCGTTGGCAGGCGGCTCCCACGCCGGGCTaGCCTTCACCAGCTCTTCGGCCTCAACCGCGCTGCCCGCCTCAC +
Preference number: 5 (lower is better)
Translates to: RLLPACRWQAAPTPG*PSPALRPQPRCPPH
Trigger: GTGAGGCGGGCAGCGCGGTTGAGGCCGAAGAGCTGGTGAAGGGCAGCCCGGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAGAAGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS GCA 90 bp CGGTCACTCCTCCCAGGCCTGGGCTGTCAGCTTCCAGCCAGGCGGTaGCGGTCACCGCAGCCGACTCCTGCAGCACCTCTTCTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RSLLPGLGCQLPARR*RSPQPTPAAPLLAR
Trigger: CCGGGCCAGAAGAGGTGCTGCAGGAGTCGGCTGCGGTGACCGGCACCGCCTGGCTGGAAGCTGACAGCCCAGGCCTGGGAGGAGTGACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS CCA 90 bp CATCTTCCCCAGCCGCTGGTGGGCCGGCTTCTTCCCGCGTGTCGTTaGCAGGCGGCTCCCACGCCGGGCTGCCCTTCACCAGCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: HLPQPLVGRLLPACR*QAAPTPGCPSPALR
Trigger: CCGAAGAGCTGGTGAAGGGCAGCCCGGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAGAAGCCGGCCCACCAGCGGCTGGGGAAGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS CCA 90 bp AGGAGCAGGACGAGGGCAGCCGAGCCCACGGCCACGCACATCACCTaGAAGTCGGTGATGATGGACTCGCAGCGCATCCCCTTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: RSRTRAAEPTATHIT*KSVMMDSQRIPLCQ
Trigger: CTGGCACAAGGGGATGCGCTGCGAGTCCATCATCACCGACTTCCAGGTGATGTGCGTGGCCGTGGGCTCGGCTGCCCTCGTCCTGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS GCA 90 bp TGTGGAAACAAGCCAGGCCCGGGGCGCATGGAGCCTCTCGGATTCTaGACCAATCCCGTGTTCCGGGCGGGAAGGCTCTCAGGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: CGNKPGPGRMEPLGF*TNPVFRAGRLSGRS
Trigger: AGACCTCCCTGAGAGCCTTCCCGCCCGGAACACGGGATTGGTGCAGAATCCGAGAGGCTCCATGCGCCCCGGGCCTGGCTTGTTTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 90 bp CTGGGACTGCGGCTACCTCGCCTTCCTTCTAGTCTCCGGGCAGCCTaGGGAGCGGCCTTTAATCCTGGTCCCTTCTCCGGGATACGTCGT +
Preference number: 5 (lower is better)
Translates to: LGLRLPRLPSSLRAA*GAAFNPGPFSGIRR
Trigger: ACGACGTATCCCGGAGAAGGGACCAGGATTAAAGGCCGCTCCCCAGGCTGCCCGGAGACTAGAAGGAAGGCGAGGTAGCCGCAGTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 90 bp GGTCGCACACTGACCGGCAGGAGCCGTTATGCCGCACAAAGCCACTaGGGCACTCAGTGCCATTTTCACTGGAGGCCAAGTCCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GRTLTGRSRYAAQSH*GTQCHFHWRPSPCL
Trigger: CAGGCAGGGACTTGGCCTCCAGTGAAAATGGCACTGAGTGCCGCAGTGGCTTTGTGCGGCATAACGGCTCCTGCCGGTCAGTGTGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS TCA 90 bp GCACTGGCCGCCATTGTGACAGTAACTTGGGAAGAGGTCGCACACTaGCCGGCAGGAGCCGTTATGCCGCACAAAGCCACTGCGGCACTC +
Preference number: 5 (lower is better)
Translates to: ALAAIVTVTWEEVAH*PAGAVMPHKATAAL
Trigger: GAGTGCCGCAGTGGCTTTGTGCGGCATAACGGCTCCTGCCGGTCAGTGTGCGACCTCTTCCCAAGTTACTGTCACAATGGCGGCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 90 bp GACTGGTGGGCTGGCCTGTCCCGGGCCCCAGACCAGGCTTCCCAGTaGGCACTAGAAGCTCATTTTCATCTTCTAGGTCTCCACCTCCTA +
Preference number: 5 (lower is better)
Translates to: DWWAGLSRAPDQASQ*ALEAHFHLLGLHLL
Trigger: TAGGAGGTGGAGACCTAGAAGATGAAAATGAGCTTCTAGTGCCCACTGGGAAGCCTGGTCTGGGGCCCGGGACAGGCCAGCCCACCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS TCA 90 bp GGTCTAGATCCCCAGCCGGGCACACATGGATGCTTGGCTTTAGAGTaGTCTGTGGGGCCCATTCACAGCTTCAGGGCTCACAGGGCAACC +
Preference number: 5 (lower is better)
Translates to: GLDPQPGTHGCLALE*SVGPIHSFRAHRAT
Trigger: GGTTGCCCTGTGAGCCCTGAAGCTGTGAATGGGCCCCACAGATCACTCTAAAGCCAAGCATCCATGTGTGCCCGGCTGGGGATCTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 90 bp AAGTCAAGCAGGCTCCAGGAAGGGGTCTCTCCCTCAGTATCAGGGTaGTTCTCTGAGGTTCCTGGTGACCCTGGGAAGCTCCCCAGATCT +
Preference number: 5 (lower is better)
Translates to: KSSRLQEGVSPSVSG*FSEVPGDPGKLPRS
Trigger: AGATCTGGGGAGCTTCCCAGGGTCACCAGGAACCTCAGAGAACCACCCTGATACTGAGGGAGAGACCCCTTCCTGGAGCCTGCTTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS TCA 90 bp CGCCACGACCCTCACCATCCAGTCCTTCGAAGTAGTCGATGTCAATaGTATCTGATGCCGGTTGGGGCTCCAGGGTGCCCTGAAATGGGT +
Preference number: 5 (lower is better)
Translates to: RHDPHHPVLRSSRCQ*YLMPVGAPGCPEMG
Trigger: ACCCATTTCAGGGCACCCTGGAGCCCCAACCGGCATCAGATATCATTGACATCGACTACTTCGAAGGACTGGATGGTGAGGGTCGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp AGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATCAGCCTGGTCACCTTaGCCACCCTCAAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SQPGHLCHPQVWATWSSGSAWSP*PPSSLG
Trigger: GCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGA...TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS GCA 90 bp GCTTTGCACTCACCTCAGCCACAGAGGCAGCAACGCACCCTTAACTaGCTCCAACCCATCTCTGCTTCCCTTGTGTGCAGCTTAACTCCT +
Preference number: 5 (lower is better)
Translates to: ALHSPQPQRQQRTLN*LQPISASLVCSLTP
Trigger: AGGAGTTAAGCTGCACACAAGGGAAGCAGAGATGGGTTGGAGGCAGTTAAGGGTGCGTTGCTGCCTCTGTGGCTGAGGTGAGTGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGGTGACGCCGGCCCCTaGGTCAGCCTGCCAGGGGAA +
Preference number: 5 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRGDAGP*VSLPGE
Trigger: TTCCCCTGGCAGGCTGACCAAGGGGCCGGCGTCACC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp AGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATTGGTCCTACGCAGCTaGGTATTCTCCGTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SQPGHLCHPQVWATWSSGLVLRS*VFSVLS
Trigger: GCTCAAGACGGAGAATACCAAGCTGCGTAGGACCAA...TCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS TCA 90 bp ACCCTCACCATCCAGTCCTTCGAAGTAGTCGATGTCAATGATATCTaGTGCCGGTTGGGGCTCCAGGGTGCCCTGAAATGGGTAAGTCAG +
Preference number: 5 (lower is better)
Translates to: TLTIQSFEVVDVNDI*CRLGLQGALKWVSQ
Trigger: CTGACTTACCCATTTCAGGGCACCCTGGAGCCCCAACCGGCATCAGATATCATTGACATCGACTACTTCGAAGGACTGGATGGTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS TCA 90 bp ACAGGGCTGGTAACAGAGGGAGGCTCCATATCAGACAGGCATAAATaGACGAATGGCAACCACCCACACCCATCCCAGAACTGTGGTCTG +
Preference number: 5 (lower is better)
Translates to: TGLVTEGGSISDRHK*TNGNHPHPSQNCGL
Trigger: CAGACCACAGTTCTGGGATGGGTGTGGGTGGTTGCCATTCGTTCATTTATGCCTGTCTGATATGGAGCCTCCCTCTGTTACCAGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS TCA 90 bp GGGGAGGAGGTACGGGGAGTGTTGCAAAGTTTCCTTACATTTGGGTaGGAGCCCTCGGCAATGGTGGAGAGGGAGAAGTTATCATTGTGG +
Preference number: 5 (lower is better)
Translates to: GEEVRGVLQSFLTFG*EPSAMVEREKLSLW
Trigger: CCACAATGATAACTTCTCCCTCTCCACCATTGCCGAGGGCTCTCACCCAAATGTAAGGAAACTTTGCAACACTCCCCGTACCTCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTCTTCCCGCGTGTCGTaGGCAGGCGGCTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPSSRVS*AGGSHA
Trigger: GGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAGA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCGAAGCTGGGCTCAGCTaGTCGCCGGGGGTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPEAGLS*SPGVGE
Trigger: CTCCCCCACCCCCGGCGACAAGCTGAGCCCAGCTTC...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCAGGGAGGGGCGGGCGTaGGCAGAGCCTGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTREGRA*AEPGKG
Trigger: CCCCTTGCCAGGCTCTGCCAACGCCCGCCCCTCCCT...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 90 bp GCCTGGTCACCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTaGATGTTAAATGACTCCTCCTCTTTCAGGCAGGACTTGAGAACC +
Preference number: 5 (lower is better)
Translates to: AWSPLPPSSLGDMEF*MLNDSSSFRQDLRT
Trigger: GGTTCTCAAGTCCTGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCTCTTCCCGCGTGTCGTaGGCAGGCGGCTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTSSRVS*AGGSHA
Trigger: GGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAGA...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS TCA 90 bp TTCCTGAGGCCAGTCTGTGTGGGAAGACCTCATGGATGGGTTCCTTaGTGTCTGGGGCATGACAACCACTCACACATTTTCAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: FLRPVCVGRPHGWVP*CLGHDNHSHIFNRV
Trigger: AACCCTGTTGAAAATGTGTGAGTGGTTGTCATGCCCCAGACATCAAGGAACCCATCCATGAGGTCTTCCCACACAGACTGGCCTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 90 bp TGTTGCAAAGTTTCCTTACATTTGGGTGAGAGCCCTCGGCAATGGTaGAGAGGGAGAAGTTATCATTGTGGAGCTCAGATGGGGTCCGGA +
Preference number: 5 (lower is better)
Translates to: CCKVSLHLGESPRQW*RGRSYHCGAQMGSG
Trigger: TCCGGACCCCATCTGAGCTCCACAATGATAACTTCTCCCTCTCCACCATTGCCGAGGGCTCTCACCCAAATGTAAGGAAACTTTGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 90 bp GAGTGTTGCAAAGTTTCCTTACATTTGGGTGAGAGCCCTCGGCAATaGTGGAGAGGGAGAAGTTATCATTGTGGAGCTCAGATGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ECCKVSLHLGESPRQ*WRGRSYHCGAQMGS
Trigger: GGACCCCATCTGAGCTCCACAATGATAACTTCTCCCTCTCCACCATTGCCGAGGGCTCTCACCCAAATGTAAGGAAACTTTGCAACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTTCTTCCCGCGTGTCGTaGGCAGGCGGCTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPSSRVS*AGGSHA
Trigger: GGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAGA...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTGAAGCTGGGCTCAGCTaGTCGCCGGGGGTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPEAGLS*SPGVGE
Trigger: CTCCCCCACCCCCGGCGACAAGCTGAGCCCAGCTTC...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCAGTCAGCTCTGGCCCTaGAGGGTCGGGTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPSQLWP*RVGCAA
Trigger: GGCAGCACACCCGACCCTCAAGGGCCAGAGCTGACT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS TCA 90 bp TCCCCCAAACCGACCGTCTACCCCTTAATGTGTTACTCACCCAAATaGCAGTTCAGGGTATCAGCCCAAGGAGATAGGACAACTCCAGTA +
Preference number: 5 (lower is better)
Translates to: SPKPTVYPLMCYSPK*QFRVSAQGDRTTPV
Trigger: TACTGGAGTTGTCCTATCTCCTTGGGCTGATACCCTGAACTGTCATTTGGGTGAGTAACACATTAAGGGGTAGACGGTCGGTTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 90 bp CATCTTATCTACAGTTATTCCTCACTGGACTGCAAGGCACTTGAGTaGACAGGGCTGGTAACAGAGGGAGGCTCCATATCAGACAGGCAT +
Preference number: 5 (lower is better)
Translates to: HLIYSYSSLDCKALE*TGLVTEGGSISDRH
Trigger: ATGCCTGTCTGATATGGAGCCTCCCTCTGTTACCAGCCCTGTGCACTCAAGTGCCTTGCAGTCCAGTGAGGAATAACTGTAGATAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 90 bp GGCCAGTCTGTGTGGGAAGACCTCATGGATGGGTTCCTTGATGTCTaGGGCATGACAACCACTCACACATTTTCAACAGGGTTTAATGGA +
Preference number: 5 (lower is better)
Translates to: GQSVWEDLMDGFLDV*GMTTTHTFSTGFNG
Trigger: TCCATTAAACCCTGTTGAAAATGTGTGAGTGGTTGTCATGCCCCAGACATCAAGGAACCCATCCATGAGGTCTTCCCACACAGACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCAGTCAGCTCTGGCCCTaGAGGGTCGGGTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTSQLWP*RVGCAA
Trigger: GGCAGCACACCCGACCCTCAAGGGCCAGAGCTGACT...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAATCAGCCTGGTCACCTTaGCCACCCTCAAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKSAWSP*PPSSLG
Trigger: GCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGA...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGGACCATGTAGGGCTTaGCACTCACCTCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKGPCRA*HSPQPQ
Trigger: CTGTGGCTGAGGTGAGTGCAAAGCCCTACATGGTCC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 90 bp ATGTTAAATGACTCCTCCTCTTTCAGGCAGGACTTGAGAACCTCCTaGATTTTGTGGGGAGCACTAGGATCATCTTGGTCCTACGCAGCT +
Preference number: 5 (lower is better)
Translates to: MLNDSSSFRQDLRTS*ILWGALGSSWSYAA
Trigger: AGCTGCGTAGGACCAAGATGATCCTAGTGCTCCCCACAAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAGAGGAGGAGTCATTTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CAA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTAGTCAGCTCTGGCCCTaGAGGGTCGGGTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPSQLWP*RVGCAA
Trigger: GGCAGCACACCCGACCCTCAAGGGCCAGAGCTGACT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGGGGTCCGGAATTTGTaGGTCCTACGCAGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRGVRNL*VLRSLV
Trigger: TACCAAGCTGCGTAGGACCAACAAATTCCGGACCCC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CAA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAGGGGTCCGGAATTTGTaGGTCCTACGCAGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKGVRNL*VLRSLV
Trigger: TACCAAGCTGCGTAGGACCAACAAATTCCGGACCCC...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CAA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAATTGCCACCCTCAAGTTaGGGCGACATGGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKLPPSS*GDMEFW
Trigger: CCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAA...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS TCA 90 bp TTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATaGCTCCTCCTCTTTCAGGCAGGACTTGAGAACCTCCTGGATTTT +
Preference number: 5 (lower is better)
Translates to: FATLKFGRHGVLDVK*LLLFQAGLENLLDF
Trigger: AAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGATTGGTCCTACGCAGCTaGGTATTCTCCGTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRLVLRS*VFSVLS
Trigger: GCTCAAGACGGAGAATACCAAGCTGCGTAGGACCAA...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTCAGCCTGGTCACCTTaGCCACCCTCAAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPSAWSP*PPSSLG
Trigger: GCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTTTCCTCAACTCGGGTaGTGGCTGTCAGAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPFPQLG*WLSERP
Trigger: AGGCCGCTCTGACAGCCACAACCCGAGTTGAGGAAA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAACATTGTGACAGTAACTaGGGAAGAGGTCGCACACTG +
Preference number: 5 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKHCDSN*GRGRTL
Trigger: CAGTGTGCGACCTCTTCCCAAGTTACTGTCACAATG...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAAGGGAGAAGTTATCATaGTGGAGCTCAGATGGGGTC +
Preference number: 5 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKREKLS*WSSDGV
Trigger: GACCCCATCTGAGCTCCACAATGATAACTTCTCCCT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CAA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAAAGAACCTCCTGGATTTaGTGGGGAGCACTAGGATCA +
Preference number: 5 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKRTSWI*WGALGS
Trigger: TGATCCTAGTGCTCCCCACAAAATCCAGGAGGTTCT...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTTGCCACCCTCAAGTTaGGGCGACATGGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPLPPSS*GDMEFW
Trigger: CCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp AGGTTAAATTATTCTGAAGACAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCATTGTGACAGTAACTaGGGAAGAGGTCGCACACTG +
Preference number: 5 (lower is better)
Translates to: RLNYSEDSSHPSQPGHLCHCDSN*GRGRTL
Trigger: CAGTGTGCGACCTCTTCCCAAGTTACTGTCACAATG...GCAAAGGTGACCAGGCTGACTTGGATGTGAACTGTCTTCAGAATAATTTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTTGGTCCTACGCAGCTaGGTATTCTCCGTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPLVLRS*VFSVLS
Trigger: GCTCAAGACGGAGAATACCAAGCTGCGTAGGACCAA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCGGGGTCCGGAATTTGTaGGTCCTACGCAGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTGVRNL*VLRSLV
Trigger: TACCAAGCTGCGTAGGACCAACAAATTCCGGACCCC...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCATTGTGACAGTAACTaGGGAAGAGGTCGCACACTG +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPHCDSN*GRGRTL
Trigger: CAGTGTGCGACCTCTTCCCAAGTTACTGTCACAATG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCAGGGAGAAGTTATCATaGTGGAGCTCAGATGGGGTC +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPREKLS*WSSDGV
Trigger: GACCCCATCTGAGCTCCACAATGATAACTTCTCCCT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCAGAACCTCCTGGATTTaGTGGGGAGCACTAGGATCA +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPRTSWI*WGALGS
Trigger: TGATCCTAGTGCTCCCCACAAAATCCAGGAGGTTCT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTTTGCCACCCTCAAGTTaGGGCGACATGGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPLPPSS*GDMEFW
Trigger: CCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAA...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGACCGCTTCCTCTCTTCTaGCTCTGCTTTAGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: NSTGLEITAAEAMYRQHRPLPLF*LCFRLN
Trigger: ATTTAACCTAAAGCAGAGCAAGAAGAGAGGAAGCGG...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTATGGCTGCAGCCTATTaGCCTAGCCTAGCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPMAAAY*PSLASP
Trigger: TGGAGACGCTAGGCTAGGCAAATAGGCTGCAGCCAT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp CAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAAATATCTCCAGATGGAGTaGCCTTGGTTCAAAACCTGT +
Preference number: 5 (lower is better)
Translates to: QHRFRNHSSRSNVQTAQKYLQME*PWFKTC
Trigger: ACAGGTTTTGAACCAAGGCAACTCCATCTGGAGATA...TTTCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp AACAGCACAGGTTTAGAAATCACAGCAGCAGAAGCAATGTACAGACAGCACAGAGAGGTACGGGGAGTGTaGCAAAGTTTCCTTACATTT +
Preference number: 5 (lower is better)
Translates to: NSTGLEITAAEAMYRQHREVRGV*QSFLTF
Trigger: AAATGTAAGGAAACTTTGCAACACTCCCCGTACCTC...TCTGTGCTGTCTGTACATTGCTTCTGCTGCTGTGATTTCTAAACCTGTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCAGCACTAGGATCATCTaGGTCCTACGCAGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPSTRII*VLRSLV
Trigger: TACCAAGCTGCGTAGGACCAAGATGATCCTAGTGCT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS-3UTR CAA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCATTGTGACAGTAACTaGGGAAGAGGTCGCACACTG +
Preference number: 5 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTHCDSN*GRGRTL
Trigger: CAGTGTGCGACCTCTTCCCAAGTTACTGTCACAATG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTTTGGTCCTACGCAGCTaGGTATTCTCCGTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPLVLRS*VFSVLS
Trigger: GCTCAAGACGGAGAATACCAAGCTGCGTAGGACCAA...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCAGAACCTCCTGGATTTaGTGGGGAGCACTAGGATCA +
Preference number: 5 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTRTSWI*WGALGS
Trigger: TGATCCTAGTGCTCCCCACAAAATCCAGGAGGTTCT...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTCTTTCAGGCAGGACTaGAGAACCTCCTGGATTTTG +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPSFRQD*RTSWIL
Trigger: CAAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAGA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCTCTGTGTTCCTTTGCTaGTTTCCTCAACTCGGGTTG +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPSVFLC*FPQLGL
Trigger: CAACCCGAGTTGAGGAAACAAGCAAAGGAACACAGA...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCACTCTCTGTGTTCCTTaGCTTGTTTCCTCAACTCGG +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPTLCVP*LVSSTR
Trigger: CCGAGTTGAGGAAACAAGCAAAGGAACACAGAGAGT...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCCAGATGGAGTTGCCTaGGTTCAAAACCTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPPDGVA*VQNLFL
Trigger: GAGAAACAGGTTTTGAACCAAGGCAACTCCATCTGG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 90 bp AGATTCTATCTCCTAATCTTTCTGATACATATCTCCAGATGGAGTTaGCTTGGTTCAAAACCTGTTTCTCAGCAGAACTATGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RFYLLIFLIHISRWS*LGSKPVSQQNYGCS
Trigger: GCTGCAGCCATAGTTCTGCTGAGAAACAGGTTTTGAACCAAGGCAACTCCATCTGGAGATATGTATCAGAAAGATTAGGAGATAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS CCA 90 bp CTATCTCCTAATCTTTCTGATACATATCTCCAGATGGAGTTGCCTTaGTTCAAAACCTGTTTCTCAGCAGAACTATGGCTGCAGCCTATT +
Preference number: 5 (lower is better)
Translates to: LSPNLSDTYLQMELP*FKTCFSAELWLQPI
Trigger: AATAGGCTGCAGCCATAGTTCTGCTGAGAAACAGGTTTTGAACCAAGGCAACTCCATCTGGAGATATGTATCAGAAAGATTAGGAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS-3UTR CAA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTAGAACCTCCTGGATTTaGTGGGGAGCACTAGGATCA +
Preference number: 5 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPRTSWI*WGALGS
Trigger: TGATCCTAGTGCTCCCCACAAAATCCAGGAGGTTCT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp TGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCCGCTTCCTCTCTTCTaGCTCTGCTTTAGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: WLQEIDSVQEEIMFLPLPPLPLF*LCFRLN
Trigger: ATTTAACCTAAAGCAGAGCAAGAAGAGAGGAAGCGG...GGGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 90 bp AGATGGAGATTCTATCTCCTAATCTTTCTGATACATATCTCCAGATaGAGTTGCCTTGGTTCAAAACCTGTTTCTCAGCAGAACTATGGC +
Preference number: 5 (lower is better)
Translates to: RWRFYLLIFLIHISR*SCLGSKPVSQQNYG
Trigger: GCCATAGTTCTGCTGAGAAACAGGTTTTGAACCAAGGCAACTCCATCTGGAGATATGTATCAGAAAGATTAGGAGATAGAATCTCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS-3UTR CAA 90 bp ATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTACCCCGCTTCCTCTCTTCTaGCTCTGCTTTAGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: MVTRNRLCTRGDNVSSPTPLPLF*LCFRLN
Trigger: ATTTAACCTAAAGCAGAGCAAGAAGAGAGGAAGCGG...GGTAGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS-3UTR CAA 90 bp CAAATGGTTACAAGAAATAGACTCTGTACAAGAGGAGATAATGTTTCTTCCCCTAAAGTTTCCTTACATTaGGGTGAGAGCCCTCGGCAA +
Preference number: 5 (lower is better)
Translates to: QMVTRNRLCTRGDNVSSPKVSLH*GESPRQ
Trigger: TTGCCGAGGGCTCTCACCCAAATGTAAGGAAACTTT...AGGGGAAGAAACATTATCTCCTCTTGTACAGAGTCTATTTCTTGTAACCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS TCA 90 bp GTATTTAAGAGACGGTCCCATTGCTGTCTTAGAAGACCAAATAAGTaGCCAAGATGGAGATTCTATCTCCTAATCTTTCTGATACATATC +
Preference number: 5 (lower is better)
Translates to: VFKRRSHCCLRRPNK*PRWRFYLLIFLIHI
Trigger: GATATGTATCAGAAAGATTAGGAGATAGAATCTCCATCTTGGTCACTTATTTGGTCTTCTAAGACAGCAATGGGACCGTCTCTTAAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS GCA 72 bp CTCTTCGGCCTCAACCGCGCTGCCCGCCTCACGCGCTaGGGGCGGGAGGGCAAGGGGCGGGACGTCAGGGCG +
Preference number: 6 (lower is better)
Translates to: LFGLNRAARLTR*GREGKGRDVRA
Trigger: CGCCCTGACGTCCCGCCCCTTGCCCTCCCGCCCGCAGCGCGTGAGGCGGGCAGCGCGGTTGAGGCCGAAGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456150.5
CDS GCA 72 bp GGCTGCCCTTCACCAGCTCTTCGGCCTCAACCGCGCTaGCCGCCTCACGCGCCGGCACGGCCCCAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: GCPSPALRPQPR*PPHAPARPQRP
Trigger: TGGCCTCTGGGGCCGTGCCGGCGCGTGAGGCGGGCAGCGCGGTTGAGGCCGAAGAGCTGGTGAAGGGCAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000610462.1
CDS GCA 72 bp GGCTGCCCTTCACCAGCTCTTCGGCCTCAACCGCGCTaGCCGCCTCACGCGCTGCGGGCGGGAGGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: GCPSPALRPQPR*PPHALRAGGQG
Trigger: CCCTTGCCCTCCCGCCCGCAGCGCGTGAGGCGGGCAGCGCGGTTGAGGCCGAAGAGCTGGTGAAGGGCAGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456150.5
CDS CCA 72 bp GAGGTCTCCGGGTCTCCACGAGGGAGGGGCGGGCGTTaGCAGAGCCTGGCAAGGGGGCGAAGCCGACCGCCC +
Preference number: 6 (lower is better)
Translates to: EVSGSPRGRGGR*QSLARGRSRPP
Trigger: GGGCGGTCGGCTTCGCCCCCTTGCCAGGCTCTGCCAACGCCCGCCCCTCCCTCGTGGAGACCCGGAGACCTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 72 bp CCCGCGTGTCGTTGGCAGGCGGCTCCCACGCCGGGCTaGCCTTCACCAGCTCTTCGGCCTCAACCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: PACRWQAAPTPG*PSPALRPQPRC
Trigger: GCAGCGCGGTTGAGGCCGAAGAGCTGGTGAAGGGCAGCCCGGCGTGGGAGCCGCCTGCCAACGACACGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS GCA 72 bp TCCAGCCAGGCGGTGCCGGTCACCGCAGCCGACTCCTaGAGCACCTCTTCTGGCCCGGCCAGCTCGCCACCG +
Preference number: 6 (lower is better)
Translates to: SSQAVPVTAADS*STSSGPASSPP
Trigger: CGGTGGCGAGCTGGCCGGGCCAGAAGAGGTGCTGCAGGAGTCGGCTGCGGTGACCGGCACCGCCTGGCTGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS CCA 72 bp CAGCCGCTGGTGGGCCGGCTTCTTCCCGCGTGTCGTTaGCAGGCGGCTCCCACGCCGGGCTGCCCTTCACCA +
Preference number: 6 (lower is better)
Translates to: QPLVGRLLPACR*QAAPTPGCPSP
Trigger: TGGTGAAGGGCAGCCCGGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAGAAGCCGGCCCACCAGCGGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS CAA 90 bp GGCTCTCAGGGAGGTCTCCGGGTCTCCACGAGGGAGGGGCGGGCGTaGGCAGAGCCTGGCAAGGGGGCGAAGCCGACCGCCCAGGCTCTA +
Preference number: 6 (lower is better)
Translates to: GSQGGLRVSTREGRA*AEPGKGAKPTAQAL
Trigger: TAGAGCCTGGGCGGTCGGCTTCGCCCCCTTGCCAGGCTCTGCCAACGCCCGCCCCTCCCTCGTGGAGACCCGGAGACCTCCCTGAGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 72 bp GGGACCGACCCCAGAGTGTGCTGTGGAGGGACAGCATaGCACCGACTGGTGGGCTGGCCTGTCCCGGGCCCC +
Preference number: 6 (lower is better)
Translates to: GTDPRVCCGGTA*HRLVGWPVPGP
Trigger: GGGGCCCGGGACAGGCCAGCCCACCAGTCGGTGGCATGCTGTCCCTCCACAGCACACTCTGGGGTCGGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 72 bp CGCCGTCCACGACGCCTCATCTTCCCCAGCCGCTGGTaGGCCGGCTTCTTCCCGCGTGTCGTTGGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: RRPRRLIFPSRW*AGFFPRVVGRR
Trigger: CCGCCTGCCAACGACACGCGGGAAGAAGCCGGCCCACCAGCGGCTGGGGAAGATGAGGCGTCGTGGACGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS CCA 72 bp TTAGGCGGCAGGTGCACGGGCGGGAGACCTGTGGGATaGGGCCACGGTCCCGCCCCAGGTGAACAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: LGGRCTGGRPVG*GHGPAPGEQAA
Trigger: TGCCGCCTGTTCACCTGGGGCGGGACCGTGGCCCCATCCCACAGGTCTCCCGCCCGTGCACCTGCCGCCTAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CAA 90 bp TCATCTTCCCCAGCCGCTGGTGGGCCGGCTTCTTCCCGCGTGTCGTaGGCAGGCGGCTCCCACGCCGGGCTGCCCTTCACCAGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: SSSPAAGGPASSRVS*AGGSHAGLPFTSSS
Trigger: CGAAGAGCTGGTGAAGGGCAGCCCGGCGTGGGAGCCGCCTGCCAACGACACGCGGGAAGAAGCCGGCCCACCAGCGGCTGGGGAAGATGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000465441.1
ENST00000610462.1
CDS GCA 72 bp AGGGCGATGCTGCTGCCGGGGACCGACCCCAGAGTGTaGTGTGGAGGGACAGCATGCCACCGACTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: RAMLLPGTDPRV*CGGTACHRLVG
Trigger: GCCCACCAGTCGGTGGCATGCTGTCCCTCCACAGCACACTCTGGGGTCGGTCCCCGGCAGCAGCATCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 72 bp TGCTGTGGAGGGACAGCATGCCACCGACTGGTGGGCTaGCCTGTCCCGGGCCCCAGACCAGGCTTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: CCGGTACHRLVG*PVPGPRPGFPV
Trigger: CACTGGGAAGCCTGGTCTGGGGCCCGGGACAGGCCAGCCCACCAGTCGGTGGCATGCTGTCCCTCCACAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 72 bp GGCATGATTGACTGCCCGAGGACCTCGTGGGGAGCCTaGAGCGTAGCTGGAAGGGCCTGGGCATCGCCGCTG +
Preference number: 6 (lower is better)
Translates to: GMIDCPRTSWGA*SVAGRAWASPL
Trigger: CAGCGGCGATGCCCAGGCCCTTCCAGCTACGCTCCAGGCTCCCCACGAGGTCCTCGGGCAGTCAATCATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS GCA 72 bp AAGCCAGGCCCGGGGCGCATGGAGCCTCTCGGATTCTaGACCAATCCCGTGTTCCGGGCGGGAAGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: KPGPGRMEPLGF*TNPVFRAGRLS
Trigger: TGAGAGCCTTCCCGCCCGGAACACGGGATTGGTGCAGAATCCGAGAGGCTCCATGCGCCCCGGGCCTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 72 bp ACGAGGGCAGCCGAGCCCACGGCCACGCACATCACCTaGAAGTCGGTGATGATGGACTCGCAGCGCATCCCC +
Preference number: 6 (lower is better)
Translates to: TRAAEPTATHIT*KSVMMDSQRIP
Trigger: GGGGATGCGCTGCGAGTCCATCATCACCGACTTCCAGGTGATGTGCGTGGCCGTGGGCTCGGCTGCCCTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 72 bp CGGCTACCTCGCCTTCCTTCTAGTCTCCGGGCAGCCTaGGGAGCGGCCTTTAATCCTGGTCCCTTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: RLPRLPSSLRAA*GAAFNPGPFSG
Trigger: CCCGGAGAAGGGACCAGGATTAAAGGCCGCTCCCCAGGCTGCCCGGAGACTAGAAGGAAGGCGAGGTAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 72 bp GCCCCCACTGTGGAAACAAGCCAGGCCCGGGGCGCATaGAGCCTCTCGGATTCTGCACCAATCCCGTGTTCC +
Preference number: 6 (lower is better)
Translates to: APTVETSQARGA*SLSDSAPIPCS
Trigger: GGAACACGGGATTGGTGCAGAATCCGAGAGGCTCCATGCGCCCCGGGCCTGGCTTGTTTCCACAGTGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 72 bp GGTAAGTCAGCTCTGGCCCTTGAGGGTCGGGTGTGCTaGCCCCCAGGTTCAGCCAAACCTCCAAGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: GKSALALEGRVC*PPGSAKPPRGS
Trigger: AGAGCCCCTTGGAGGTTTGGCTGAACCTGGGGGGCAGCACACCCGACCCTCAAGGGCCAGAGCTGACTTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS GCA 72 bp GGCTGCCCTTCACCAGCTCTTCGGCCTCAACCGCGCTaGCCGCCTCACGCGCCAAATGACAGTTCAGGGTAT +
Preference number: 6 (lower is better)
Translates to: GCPSPALRPQPR*PPHAPNDSSGY
Trigger: ATACCCTGAACTGTCATTTGGCGCGTGAGGCGGGCAGCGCGGTTGAGGCCGAAGAGCTGGTGAAGGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465441.1
CDS GCA 72 bp TCTGTAGCCTCAGGAATGGCAGGGGGCATGATTGACTaGCCGAGGACCTCGTGGGGAGCCTGGAGCGTAGCT +
Preference number: 6 (lower is better)
Translates to: SVASGMAGGMID*PRTSWGAWSVA
Trigger: AGCTACGCTCCAGGCTCCCCACGAGGTCCTCGGGCAGTCAATCATGCCCCCTGCCATTCCTGAGGCTACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS GCA 72 bp GGGAAGAGGTCGCACACTGACCGGCAGGAGCCGTTATaGCGCACAAAGCCACTGCGGCACTCAGTGCCATTT +
Preference number: 6 (lower is better)
Translates to: GKRSHTDRQEPL*RTKPLRHSVPF
Trigger: AAATGGCACTGAGTGCCGCAGTGGCTTTGTGCGGCATAACGGCTCCTGCCGGTCAGTGTGCGACCTCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CAA 72 bp CCACCAGGTAGCACTGGCCGCCATTGTGACAGTAACTaGGGAAGAGGTCGCACACTGACCGGCAGGAGCCGT +
Preference number: 6 (lower is better)
Translates to: PPGSTGRHCDSN*GRGRTLTGRSR
Trigger: ACGGCTCCTGCCGGTCAGTGTGCGACCTCTTCCCAAGTTACTGTCACAATGGCGGCCAGTGCTACCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS GCA 72 bp CTGACCGGCAGGAGCCGTTATGCCGCACAAAGCCACTaGGGCACTCAGTGCCATTTTCACTGGAGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: LTGRSRYAAQSH*GTQCHFHWRPS
Trigger: ACTTGGCCTCCAGTGAAAATGGCACTGAGTGCCGCAGTGGCTTTGTGCGGCATAACGGCTCCTGCCGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 72 bp AGGCTCCAGGAAGGGGTCTCTCCCTCAGTATCAGGGTaGTTCTCTGAGGTTCCTGGTGACCCTGGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: RLQEGVSPSVSG*FSEVPGDPGKL
Trigger: GAGCTTCCCAGGGTCACCAGGAACCTCAGAGAACCACCCTGATACTGAGGGAGAGACCCCTTCCTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CAA 90 bp CTATGTTCTCCACCAGGTAGCACTGGCCGCCATTGTGACAGTAACTaGGGAAGAGGTCGCACACTGACCGGCAGGAGCCGTTATGCCGCA +
Preference number: 6 (lower is better)
Translates to: LCSPPGSTGRHCDSN*GRGRTLTGRSRYAA
Trigger: TGCGGCATAACGGCTCCTGCCGGTCAGTGTGCGACCTCTTCCCAAGTTACTGTCACAATGGCGGCCAGTGCTACCTGGTGGAGAACATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS GCA 72 bp TCACCTCAGCCACAGAGGCAGCAACGCACCCTTAACTaGCTCCAACCCATCTCTGCTTCCCTTGTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SPQPQRQQRTLN*LQPISASLVCS
Trigger: GCTGCACACAAGGGAAGCAGAGATGGGTTGGAGGCAGTTAAGGGTGCGTTGCTGCCTCTGTGGCTGAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 72 bp CTCACAGGGCAACCCAAGACCACGCACCAGGAGGTCTaGTTAGTCGGCAGGAGGAACCGCAACCTAGTTACT +
Preference number: 6 (lower is better)
Translates to: LTGQPKTTHQEV*LVGRRNRNLVT
Trigger: AGTAACTAGGTTGCGGTTCCTCCTGCCGACTAAGCAGACCTCCTGGTGCGTGGTCTTGGGTTGCCCTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS TCA 72 bp CCTCACCATCCAGTCCTTCGAAGTAGTCGATGTCAATaGTATCTGATGCCGGTTGGGGCTCCAGGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: PHHPVLRSSRCQ*YLMPVGAPGCP
Trigger: AGGGCACCCTGGAGCCCCAACCGGCATCAGATATCATTGACATCGACTACTTCGAAGGACTGGATGGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 72 bp GGAGGTACGGGGAGTGTTGCAAAGTTTCCTTACATTTaGGTGAGAGCCCTCGGCAATGGTGGAGAGGGAGAA +
Preference number: 6 (lower is better)
Translates to: GGTGSVAKFPYI*VRALGNGGEGE
Trigger: TTCTCCCTCTCCACCATTGCCGAGGGCTCTCACCCAAATGTAAGGAAACTTTGCAACACTCCCCGTACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CAA 72 bp GAGCCCTCGGCAATGGTGGAGAGGGAGAAGTTATCATaGTGGAGCTCAGATGGGGTCCGGAATTTGTTGGTC +
Preference number: 6 (lower is better)
Translates to: EPSAMVEREKLS*WSSDGVRNLLV
Trigger: GACCAACAAATTCCGGACCCCATCTGAGCTCCACAATGATAACTTCTCCCTCTCCACCATTGCCGAGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS CAA 72 bp AACCTGTTTCTCAGCAGAACTATGGCTGCAGCCTATTaGCCTAGCCTAGCGTCTCCACCTCTCCTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: NLFLSRTMAAAY*PSLASPPLLPG
Trigger: ACCAGGCAGGAGAGGTGGAGACGCTAGGCTAGGCAAATAGGCTGCAGCCATAGTTCTGCTGAGAAACAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS CAA 72 bp AGGAGGTACGGGGAGTGTTGCAAAGTTTCCTTACATTaGGGTGAGAGCCCTCGGCAATGGTGGAGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: RRYGECCKVSLH*GESPRQWWRGR
Trigger: TCTCCCTCTCCACCATTGCCGAGGGCTCTCACCCAAATGTAAGGAAACTTTGCAACACTCCCCGTACCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS TCA 72 bp ATCCAGTCCTTCGAAGTAGTCGATGTCAATGATATCTaGTGCCGGTTGGGGCTCCAGGGTGCCCTGAAATGG +
Preference number: 6 (lower is better)
Translates to: IQSFEVVDVNDI*CRLGLQGALKW
Trigger: CCATTTCAGGGCACCCTGGAGCCCCAACCGGCATCAGATATCATTGACATCGACTACTTCGAAGGACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 72 bp GGTGGAGAGGGAGAAGTTATCATTGTGGAGCTCAGATaGGGTCCGGAATTTGTTGGTCCTACGCAGCTTGGT +
Preference number: 6 (lower is better)
Translates to: GGEGEVIIVELR*GPEFVGPTQLG
Trigger: ACCAAGCTGCGTAGGACCAACAAATTCCGGACCCCATCTGAGCTCCACAATGATAACTTCTCCCTCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS CCA 72 bp CCCTCGGCAATGGTGGAGAGGGAGAAGTTATCATTGTaGAGCTCAGATGGGGTCCGGAATTTGTTGGTCCTA +
Preference number: 6 (lower is better)
Translates to: PSAMVEREKLSL*SSDGVRNLLVL
Trigger: TAGGACCAACAAATTCCGGACCCCATCTGAGCTCCACAATGATAACTTCTCCCTCTCCACCATTGCCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS CAA 90 bp CTCCTGTCACCTTTTACTGTATGTAGACTCTCTGTGTTCCTTTGCTaGTTTCCTCAACTCGGGTTGTGGCTGTCAGAGCGGCCTACCTCC +
Preference number: 6 (lower is better)
Translates to: LLSPFTVCRLSVFLC*FPQLGLWLSERPTS
Trigger: GGAGGTAGGCCGCTCTGACAGCCACAACCCGAGTTGAGGAAACAAGCAAAGGAACACAGAGAGTCTACATACAGTAAAAGGTGACAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CAA 90 bp TTGGTTCAAAACCTGTTTCTCAGCAGAACTATGGCTGCAGCCTATTaGCCTAGCCTAGCGTCTCCACCTCTCCTGCCTGGTAAACTCCTC +
Preference number: 6 (lower is better)
Translates to: LVQNLFLSRTMAAAY*PSLASPPLLPGKLL
Trigger: GAGGAGTTTACCAGGCAGGAGAGGTGGAGACGCTAGGCTAGGCAAATAGGCTGCAGCCATAGTTCTGCTGAGAAACAGGTTTTGAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS TCA 72 bp CCAGTCTGTGTGGGAAGACCTCATGGATGGGTTCCTTaGTGTCTGGGGCATGACAACCACTCACACATTTTC +
Preference number: 6 (lower is better)
Translates to: PVCVGRPHGWVP*CLGHDNHSHIF
Trigger: GAAAATGTGTGAGTGGTTGTCATGCCCCAGACATCAAGGAACCCATCCATGAGGTCTTCCCACACAGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS TCA 72 bp GTAACAGAGGGAGGCTCCATATCAGACAGGCATAAATaGACGAATGGCAACCACCCACACCCATCCCAGAAC +
Preference number: 6 (lower is better)
Translates to: VTEGGSISDRHK*TNGNHPHPSQN
Trigger: GTTCTGGGATGGGTGTGGGTGGTTGCCATTCGTTCATTTATGCCTGTCTGATATGGAGCCTCCCTCTGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS TCA 72 bp GTACGGGGAGTGTTGCAAAGTTTCCTTACATTTGGGTaGGAGCCCTCGGCAATGGTGGAGAGGGAGAAGTTA +
Preference number: 6 (lower is better)
Translates to: VRGVLQSFLTFG*EPSAMVEREKL
Trigger: TAACTTCTCCCTCTCCACCATTGCCGAGGGCTCTCACCCAAATGTAAGGAAACTTTGCAACACTCCCCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS GCA 72 bp TACAGTTATTCCTCACTGGACTGCAAGGCACTTGAGTaGACAGGGCTGGTAACAGAGGGAGGCTCCATATCA +
Preference number: 6 (lower is better)
Translates to: YSYSSLDCKALE*TGLVTEGGSIS
Trigger: TGATATGGAGCCTCCCTCTGTTACCAGCCCTGTGCACTCAAGTGCCTTGCAGTCCAGTGAGGAATAACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CCA 72 bp CCTTTGCCACCCTCAAGTTTGGGCGACATGGAGTTCTaGATGTTAAATGACTCCTCCTCTTTCAGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: PLPPSSLGDMEF*MLNDSSSFRQD
Trigger: GTCCTGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 72 bp GTGTGGGAAGACCTCATGGATGGGTTCCTTGATGTCTaGGGCATGACAACCACTCACACATTTTCAACAGGG +
Preference number: 6 (lower is better)
Translates to: VWEDLMDGFLDV*GMTTTHTFSTG
Trigger: CCCTGTTGAAAATGTGTGAGTGGTTGTCATGCCCCAGACATCAAGGAACCCATCCATGAGGTCTTCCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CAA 72 bp TCCTCTTTCAGGCAGGACTTGAGAACCTCCTGGATTTaGTGGGGAGCACTAGGATCATCTTGGTCCTACGCA +
Preference number: 6 (lower is better)
Translates to: SSFRQDLRTSWI*WGALGSSWSYA
Trigger: TGCGTAGGACCAAGATGATCCTAGTGCTCCCCACAAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS CAA 90 bp CAGTTCACATCCAAGTCAGCCTGGTCACCTTTGCCACCCTCAAGTTaGGGCGACATGGAGTTCTGGATGTTAAATGACTCCTCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: QFTSKSAWSPLPPSS*GDMEFWMLNDSSSF
Trigger: GAAAGAGGAGGAGTCATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CAA 90 bp AATGACTCCTCCTCTTTCAGGCAGGACTTGAGAACCTCCTGGATTTaGTGGGGAGCACTAGGATCATCTTGGTCCTACGCAGCTTGGTAT +
Preference number: 6 (lower is better)
Translates to: NDSSSFRQDLRTSWI*WGALGSSWSYAAWY
Trigger: ATACCAAGCTGCGTAGGACCAAGATGATCCTAGTGCTCCCCACAAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAGAGGAGGAGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS TCA 72 bp CCGACCGTCTACCCCTTAATGTGTTACTCACCCAAATaGCAGTTCAGGGTATCAGCCCAAGGAGATAGGACA +
Preference number: 6 (lower is better)
Translates to: PTVYPLMCYSPK*QFRVSAQGDRT
Trigger: TGTCCTATCTCCTTGGGCTGATACCCTGAACTGTCATTTGGGTGAGTAACACATTAAGGGGTAGACGGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS TCA 72 bp TCATCTTGGTCCTACGCAGCTTGGTATTCTCCGTCTTaGGCAGGTAGAGCTTCTTGGCAAAGAACACCGTCA +
Preference number: 6 (lower is better)
Translates to: SSWSYAAWYSPS*AGRASWQRTPS
Trigger: TGACGGTGTTCTTTGCCAAGAAGCTCTACCTGCTCAAGACGGAGAATACCAAGCTGCGTAGGACCAAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS CCA 72 bp GTTTCCTTACATTTGGGTGAGAGCCCTCGGCAATGGTaGAGAGGGAGAAGTTATCATTGTGGAGCTCAGATG +
Preference number: 6 (lower is better)
Translates to: VSLHLGESPRQW*RGRSYHCGAQM
Trigger: CATCTGAGCTCCACAATGATAACTTCTCCCTCTCCACCATTGCCGAGGGCTCTCACCCAAATGTAAGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS TCA 72 bp ATTTGTTGGTCCTACGCAGCTTGGTATTCTCCGTCTTaGGCAGGTAGAGCTTCTTGGCAAAGAACACCGTCA +
Preference number: 6 (lower is better)
Translates to: ICWSYAAWYSPS*AGRASWQRTPS
Trigger: TGACGGTGTTCTTTGCCAAGAAGCTCTACCTGCTCAAGACGGAGAATACCAAGCTGCGTAGGACCAACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
CDS TCA 72 bp CTCAAGTTTGGGCGACATGGAGTTCTGGATGTTAAATaGCTCCTCCTCTTTCAGGCAGGACTTGAGAACCTC +
Preference number: 6 (lower is better)
Translates to: LKFGRHGVLDVK*LLLFQAGLENL
Trigger: GAGGTTCTCAAGTCCTGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAACTCCATGTCGCCCAAACTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS CCA 72 bp AAAGTTTCCTTACATTTGGGTGAGAGCCCTCGGCAATaGTGGAGAGGGAGAAGTTATCATTGTGGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: KVSLHLGESPRQ*WRGRSYHCGAQ
Trigger: CTGAGCTCCACAATGATAACTTCTCCCTCTCCACCATTGCCGAGGGCTCTCACCCAAATGTAAGGAAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CAA 72 bp CCTTTTACTGTATGTAGACTCTCTGTGTTCCTTTGCTaGTTTCCTCAACTCGGGTTGTGGCTGTCAGAGCGG +
Preference number: 6 (lower is better)
Translates to: PFTVCRLSVFLC*FPQLGLWLSER
Trigger: CCGCTCTGACAGCCACAACCCGAGTTGAGGAAACAAGCAAAGGAACACAGAGAGTCTACATACAGTAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CAA 90 bp ATGGAGTTCTGGATGTTAAATGACTCCTCCTCTTTCAGGCAGGACTaGAGAACCTCCTGGATTTTGTGGGGAGCACTAGGATCATCTTGG +
Preference number: 6 (lower is better)
Translates to: MEFWMLNDSSSFRQD*RTSWILWGALGSSW
Trigger: CCAAGATGATCCTAGTGCTCCCCACAAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAACTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610462.1
CDS TCA 72 bp ATGTGGTGGGGTAGAAATCAGATTCATCGAAGGGGGTaGAATCATCGTATAAGTCAAGCAGGCTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: MWWGRNQIHRRG*NHRISQAGSRK
Trigger: CTTCCTGGAGCCTGCTTGACTTATACGATGATTTCACCCCCTTCGATGAATCTGATTTCTACCCCACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264723.9
ENST00000383738.6
ENST00000456150.5
ENST00000610462.1
CDS GCA 72 bp TCATCTCATCTTATCTACAGTTATTCCTCACTGGACTaGAAGGCACTTGAGTGCACAGGGCTGGTAACAGAG +
Preference number: 6 (lower is better)
Translates to: SSHLIYSYSSLD*KALECTGLVTE
Trigger: CTCTGTTACCAGCCCTGTGCACTCAAGTGCCTTGCAGTCCAGTGAGGAATAACTGTAGATAAGATGAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383738.6
CDS CAA 90 bp ATGGAGTTCTGGATGTTAAATGACTCCTCCTCTTTCAGGCAGGACTaGAGAACCTCCTGGATTTTGTGGGGAGCACTAGGATCATCATTT +
Preference number: 6 (lower is better)
Translates to: MEFWMLNDSSSFRQD*RTSWILWGALGSSF
Trigger: AAATGATGATCCTAGTGCTCCCCACAAAATCCAGGAGGTTCTCAAGTCCTGCCTGAAAGAGGAGGAGTCATTTAACATCCAGAACTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264723.9
ENST00000456150.5
CDS CAA 90 bp GAGATTCTATCTCCTAATCTTTCTGATACATATCTCCAGATGGAGTaGCCTTGGTTCAAAACCTGTTTCTCAGCAGAACTATGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: EILSPNLSDTYLQME*PWFKTCFSAELWLQ
Trigger: CTGCAGCCATAGTTCTGCTGAGAAACAGGTTTTGAACCAAGGCAACTCCATCTGGAGATATGTATCAGAAAGATTAGGAGATAGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS TCA 72 bp AGACGGTCCCATTGCTGTCTTAGAAGACCAAATAAGTaGCCAAGATGGAGATTCTATCTCCTAATCTTTCTG +
Preference number: 6 (lower is better)
Translates to: RRSHCCLRRPNK*PRWRFYLLIFL
Trigger: CAGAAAGATTAGGAGATAGAATCTCCATCTTGGTCACTTATTTGGTCTTCTAAGACAGCAATGGGACCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS CCA 72 bp AATCTTTCTGATACATATCTCCAGATGGAGTTGCCTTaGTTCAAAACCTGTTTCTCAGCAGAACTATGGCTG +
Preference number: 6 (lower is better)
Translates to: NLSDTYLQMELP*FKTCFSAELWL
Trigger: CAGCCATAGTTCTGCTGAGAAACAGGTTTTGAACCAAGGCAACTCCATCTGGAGATATGTATCAGAAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS GCA 72 bp CTCCTAATCTTTCTGATACATATCTCCAGATGGAGTTaGCTTGGTTCAAAACCTGTTTCTCAGCAGAACTAT +
Preference number: 6 (lower is better)
Translates to: LLIFLIHISRWS*LGSKPVSQQNY
Trigger: ATAGTTCTGCTGAGAAACAGGTTTTGAACCAAGGCAACTCCATCTGGAGATATGTATCAGAAAGATTAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1
CDS CAA 72 bp TCTCCTAATCTTTCTGATACATATCTCCAGATGGAGTaGCCTTGGTTCAAAACCTGTTTCTCAGCAGAACTA +
Preference number: 6 (lower is better)
Translates to: SPNLSDTYLQME*PWFKTCFSAEL
Trigger: TAGTTCTGCTGAGAAACAGGTTTTGAACCAAGGCAACTCCATCTGGAGATATGTATCAGAAAGATTAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383738.6
ENST00000465441.1