RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSPG4 (Homo sapiens)

Ensembl gene IDs: ENSG00000173546

Ensembl transcript IDs: ENST00000308508.5

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCTGAGGCCAGGCCGGAGGGCCGACCCCAGGGGCCCTCTGTATaGAAGCCGACGCAGACAAGGGCCCAGTGCATAGTTAAGACACAA +
Preference number: 1 (lower is better)
Translates to: LAEARPEGRPQGPSV*KPTQTRAQCIVKTQ
Trigger: TTGTGTCTTAACTATGCACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGCCCTCCGGCCTGGCCTCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATaGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGCCCAGGCCA +
Preference number: 1 (lower is better)
Translates to: DTQTAPGMEAMGPGT*ASLSLARSASGPRP
Trigger: TGGCCTGGGCCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CCA 90 bp CTCCAGGTCTCTCTTGCTCTGGGGATACTCAGACAGCACCAGGCATaGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCC +
Preference number: 1 (lower is better)
Translates to: LQVSLALGILRQHQA*KQWGPGHGQACPWP
Trigger: GGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATCCCCAGAGCAAGAGAGACCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR GCA 90 bp CGCAGTGGCCTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTaGTCCAAAGCCACTGACACATGCATGTTTAGCCCTTGGCCCATC +
Preference number: 1 (lower is better)
Translates to: RSGLGLRPSMSPSLT*SKATDTCMFSPWPI
Trigger: GATGGGCCAAGGGCTAAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAGGCCACTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CCA 90 bp CTTCCCTCCCCAGGGTACTTCCTTCTCCTTGCCCTCTTAGCAGCCTaGGTCAGGCGCGACTTACCCAAGGTCACAGACCCAGGACCCAGA +
Preference number: 1 (lower is better)
Translates to: LPSPGYFLLLALLAA*VRRDLPKVTDPGPR
Trigger: TCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTCGCGCCTGACCCAGGCTGCTAAGAGGGCAAGGAGAAGGAAGTACCCTGGGGAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR GCA 90 bp ACTATCTCCCAGGACCCTCCACCCCTGGTGTCTCCAGGTCTCTCTTaGTCTGGGGATACTCAGACAGCACCAGGCATGGAAGCAATGGGG +
Preference number: 1 (lower is better)
Translates to: TISQDPPPLVSPGLS*SGDTQTAPGMEAMG
Trigger: CCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATCCCCAGAGCAAGAGAGACCTGGAGACACCAGGGGTGGAGGGTCCTGGGAGATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CCA 90 bp CCAAAGCCACTGACACATGCATGTTTAGCCCTTGGCCCATCAAGATaGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCAC +
Preference number: 1 (lower is better)
Translates to: PKPLTHACLALGPSR*GPGNELAADPPPSH
Trigger: GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCCAAGGGCTAAACATGCATGTGTCAGTGGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR TCA 90 bp TGTCTTGCAGCTCTTTGTAGAGGACCTAGCCTTTCTCTACTGAACTaGAGGGGTTTGGTCCCATCACCCGAAGACTGGCCCACCTGCCCA +
Preference number: 1 (lower is better)
Translates to: CLAALCRGPSLSLLN*RGLVPSPEDWPTCP
Trigger: TGGGCAGGTGGGCCAGTCTTCGGGTGATGGGACCAAACCCCTTCAGTTCAGTAGAGAAAGGCTAGGTCCTCTACAAAGAGCTGCAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CCA 90 bp CCCAGAGCAACCTACCCACCCTGCACCCTGAATATATTATCCTATTaGCTTATGCCTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTC +
Preference number: 1 (lower is better)
Translates to: PRATYPPCTLNILSY*LMPSRLEALSPLAL
Trigger: GAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAGGCATAAGCCAATAGGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGCTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR TCA 90 bp ATTTTTGTCTTGCAGCTCTTTGTAGAGGACCTAGCCTTTCTCTACTaGACTGAAGGGGTTTGGTCCCATCACCCGAAGACTGGCCCACCT +
Preference number: 1 (lower is better)
Translates to: IFVLQLFVEDLAFLY*TEGVWSHHPKTGPP
Trigger: AGGTGGGCCAGTCTTCGGGTGATGGGACCAAACCCCTTCAGTTCAGTAGAGAAAGGCTAGGTCCTCTACAAAGAGCTGCAAGACAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CCA 90 bp CTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACAGACAGCACCAGGCATaGAAGCAATGGGGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: LGLRPSMSPSLTCSKATDRQHQA*KQWGPG
Trigger: TCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCT...GTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR GCA 90 bp GGGCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGTATCCTATTGGCTTATaGCTTCTAGACTGGAGGCGC +
Preference number: 2 (lower is better)
Translates to: GPTPGALCMQADADKGPVYPIGL*LLDWRR
Trigger: GCGCCTCCAGTCTAGAAGGCATAAGCCAATAGGATA...CACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CCA 90 bp CTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAGGGGATACCATCGGGCAAGCCTGTCCCTaGCCCGATCAGCATCTGGGC +
Preference number: 2 (lower is better)
Translates to: LLDWRRSLLLPSTPGDTIGQACP*PDQHLG
Trigger: GCCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCC...GATGGTATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR TCA 90 bp AGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGTTCTCCAGGCTGGAGGTTCCAGCTCTTaGCTCCACTCTGTCCCGGAC +
Preference number: 2 (lower is better)
Translates to: RRTELKPASTLAPAVLQAGGSSS*LHSVPD
Trigger: GTCCGGGACAGAGTGGAGTCAAGAGCTGGAACCTCC...AGCCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CAA 90 bp GACTATCTCCCAGGACCCTCCACCCCTGGTGTCTCCAGGTCTCTCTaGCTCTGGGGATACTCAGACAGCACCAGGCATGGAAGCAATGGG +
Preference number: 2 (lower is better)
Translates to: DYLPGPSTPGVSRSL*LWGYSDSTRHGSNG
Trigger: CCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATCCCCAGAGCAAGAGAGACCTGGAGACACCAGGGGTGGAGGGTCCTGGGAGATAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCAGACAAAGGGTGGCCTaGGTTGGAGTGGAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: GPSRWGPGNELAADPPPSRQRVA*VGVEKP
Trigger: TGGCTTTTCCACTCCAACCCAGGCCACCCTTTGTCT...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CCA 90 bp CTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCGCCCTGGGAATGAACTaGCTGCAGACCCTCCTCCAT +
Preference number: 2 (lower is better)
Translates to: LRPSMSPSLTCSKATDTCALGMN*LQTLLH
Trigger: ATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGC...GCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR GCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCCTCCACCTTGGCCCCTaGAGTTCTCCAGGCTCGGAG +
Preference number: 2 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCLHLGP*SSPGSE
Trigger: CTCCGAGCCTGGAGAACTGCAGGGGCCAAGGTGGAG...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR GCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACGTACTTCCTTCTCCTTaGCCTCTTAGCAGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: PSRWGPGNELAADPPPSHVLPSP*PLSSLG
Trigger: ACCCAGGCTGCTAAGAGGGCAAGGAGAAGGAAGTAC...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CCA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTCAGGCATGGAAGCAATaGGGCCCGGGACATGGGCAA +
Preference number: 2 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFQAWKQ*GPGHGQ
Trigger: TTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTG...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CCA 90 bp ATTGGCTTATGCCTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAAGCCTGCCTCCACCTTaGCCCCTGCAGTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: IGLCLLDWRRSLLLPSTPSLPPP*PLQFSR
Trigger: CCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCT...TGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAGGCATAAGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACAAGGGTGGCCTGGGTTaGAGTGGAAAAGCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: PSRWGPGNELAADPPPSHKGGLG*SGKARN
Trigger: ATTCCTGGCTTTTCCACTCCAACCCAGGCCACCCTT...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR TCA 90 bp ATTGGCTTATGCCTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAAGGCTCGGAGTGAGCTaGGGGAGGTTCCAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: IGLCLLDWRRSLLLPSTPRLGVS*GRFQLL
Trigger: CAAGAGCTGGAACCTCCCTCAGCTCACTCCGAGCCT...TGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAGGCATAAGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR GCA 90 bp CCACTGACACATGCATGTTTAGCCCTTGGCCCATCAAGATGGGGCCCTGGGAATGGCGCTCTCTCCTCTTaGCCTCTACTCCAGGGGATA +
Preference number: 2 (lower is better)
Translates to: PLTHACLALGPSRWGPGNGALSS*PLLQGI
Trigger: TATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCC...ATTCCCAGGGCCCCATCTTGATGGGCCAAGGGCTAAACATGCATGTGTCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR GCA 90 bp CTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCTCTCCAGGTCTCTCTTaGTCTGGGGATACTCAGACA +
Preference number: 2 (lower is better)
Translates to: LRPSMSPSLTCSKATDTCSPGLS*SGDTQT
Trigger: TGTCTGAGTATCCCCAGAGCAAGAGAGACCTGGAGA...GCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCAGGTCTCTCTTGCTCTaGGGATACTCAGACAGCACC +
Preference number: 2 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCRSLLL*GYSDST
Trigger: GGTGCTGTCTGAGTATCCCCAGAGCAAGAGAGACCT...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR GCA 72 bp GCCAGGCCGGAGGGCCGACCCCAGGGGCCCTCTGTATaGAAGCCGACGCAGACAAGGGCCCAGTGCATAGTT +
Preference number: 3 (lower is better)
Translates to: ARPEGRPQGPSV*KPTQTRAQCIV
Trigger: AACTATGCACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGCCCTCCGGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CCA 72 bp ACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATaGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGG +
Preference number: 3 (lower is better)
Translates to: TAPGMEAMGPGT*ASLSLARSASG
Trigger: CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR TCA 72 bp TTTAGCCCTTGGCCCATCAAGATGGGGCCCTGGGAATaGACTGGCTGCAGACCCTCCTCCATCCCACACCCC +
Preference number: 3 (lower is better)
Translates to: FSPWPIKMGPWE*TGCRPSSIPHP
Trigger: GGGGTGTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCCAAGGGCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CCA 72 bp TCTCTTGCTCTGGGGATACTCAGACAGCACCAGGCATaGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGT +
Preference number: 3 (lower is better)
Translates to: SLALGILRQHQA*KQWGPGHGQAC
Trigger: ACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATCCCCAGAGCAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CAA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTAGGCGCTCTCTCCTCTaGCCCTCTACTCCAGGGGAT +
Preference number: 3 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFRRSLL*PSTPGD
Trigger: ATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCT...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CCA 72 bp TCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATaGAACCAAGTGCCCCCAGCTGCCTGCCCTAGTCCT +
Preference number: 3 (lower is better)
Translates to: SRASKALFIQAP*NQVPPAACPSP
Trigger: AGGACTAGGGCAGGCAGCTGGGGGCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR-3UTR CAA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTGTCTCCAGGTCTCTCTaGCTCTGGGGATACTCAGAC +
Preference number: 3 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFVSRSL*LWGYSD
Trigger: GTCTGAGTATCCCCAGAGCAAGAGAGACCTGGAGAC...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR TCA 72 bp GCTCTTTGTAGAGGACCTAGCCTTTCTCTACTGAACTaGAGGGGTTTGGTCCCATCACCCGAAGACTGGCCC +
Preference number: 3 (lower is better)
Translates to: ALCRGPSLSLLN*RGLVPSPEDWP
Trigger: GGGCCAGTCTTCGGGTGATGGGACCAAACCCCTTCAGTTCAGTAGAGAAAGGCTAGGTCCTCTACAAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR GCA 72 bp CCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTaGATAGTTAAGACACAAACACCACACAGCTGTCCA +
Preference number: 3 (lower is better)
Translates to: PSVCKPTQTRAQ*IVKTQTPHSCP
Trigger: TGGACAGCTGTGTGGTGTTTGTGTCTTAACTATGCACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR TCA 72 bp TTGCAGCTCTTTGTAGAGGACCTAGCCTTTCTCTACTaGACTGAAGGGGTTTGGTCCCATCACCCGAAGACT +
Preference number: 3 (lower is better)
Translates to: LQLFVEDLAFLY*TEGVWSHHPKT
Trigger: AGTCTTCGGGTGATGGGACCAAACCCCTTCAGTTCAGTAGAGAAAGGCTAGGTCCTCTACAAAGAGCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR TCA 72 bp AACCCATCCCCAGAGCAACCTACCCACCCTGCACCCTaGATATATTATCCTATTGGCTTATGCCTTCTAGAC +
Preference number: 3 (lower is better)
Translates to: NPSPEQPTHPAP*IYYPIGLCLLD
Trigger: GTCTAGAAGGCATAAGCCAATAGGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGCTCTGGGGATGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GGGCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGTGGGGCTGCCCAGCATaGAGGGGCTCCTCGGACACC +
Preference number: 4 (lower is better)
Translates to: GPTPGALCMQADADKGPVWGCPA*RGSSDT
Trigger: GGTGTCCGAGGAGCCCCTCCATGCTGGGCAGCCCCA...CACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGCACACGAGAGCCTCGGGTaGGCCGGAGTGGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: ADPRGPLYASRRRQGPSAHESLG*AGVGQR
Trigger: CCTCTGTCCCACTCCGGCTCACCCGAGGCTCTCGTG...TGCACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCAGTGAGACTGTCACCTaGGGGGCCGGGGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HGSNGARDMGKPVPGPISSETVT*GAGGPP
Trigger: GGGAGGGCCCCCGGCCCCGCAGGTGACAGTCTCACT...GCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGCAGGTGGCACTGCCTCCTaGGCTGCCTCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ADPRGPLYASRRRQGPSAGGTAS*AASSWS
Trigger: GGACCAGCTGGAGGCAGCCCAGGAGGCAGTGCCACC...TGCACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTGGCACCGCAGTGGCCTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGGCCCCTGCTGGCCCCTaGAGGTGGGCACGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: LAPQWPRPETLDEPQPNLAPAGP*RWARKW
Trigger: CCACTTTCGTGCCCACCTCCAGGGGCCAGCAGGGGC...CAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAGGCCACTGCGGTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCGCAGGGTGGCACCCTaGGGCCATGGCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSRRVAP*GHGPPA
Trigger: GGCAGGTGGGCCATGGCCCCAGGGTGCCACCCTGCG...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGAGCCATCCTGCTGGGTaGCCCCACCGCCGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SNGARDMGKPVPGPISIWSHPAG*PHRRGH
Trigger: ATGCCCACGGCGGTGGGGGCACCCAGCAGGATGGCT...CCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CTGGCACCGCAGTGGCCTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGAAGTGGAAGCCATCCTaGTGGGTGCCCCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: LAPQWPRPETLDEPQPNLKWKPS*WVPPPP
Trigger: CGGCGGTGGGGGCACCCAGCAGGATGGCTTCCACTT...CAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAGGCCACTGCGGTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GGGCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGTGGGACTGCAGGAAGTaGGGCTGCCCAGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: GPTPGALCMQADADKGPVWDCRK*GCPAWR
Trigger: CCTCCATGCTGGGCAGCCCCACTTCCTGCAGTCCCA...CACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTGGCACCGCAGTGGCCTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGGTGCCCCCACCGCCGTaGGCATACACTAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LAPQWPRPETLDEPQPNLVPPPP*AYTSCP
Trigger: AGGGCAGCTAGTGTATGCCCACGGCGGTGGGGGCAC...CAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAGGCCACTGCGGTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGTCCACCACACTCAGCTaGGCCCGGGAGATGGGGGCA +
Preference number: 4 (lower is better)
Translates to: AMGPGTWASLSLARSASGSTTLS*AREMGA
Trigger: TGCCCCCATCTCCCGGGCCCAGCTGAGTGTGGTGGA...CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTGGCACCGCAGTGGCCTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTGAGGAAGCCGTTGTaGGGTGCCCGCTGGACCTCG +
Preference number: 4 (lower is better)
Translates to: LAPQWPRPETLDEPQPNLLRKPL*GARWTS
Trigger: CGAGGTCCAGCGGGCACCCCACAACGGCTTCCTCAG...CAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAGGCCACTGCGGTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCCTGGAGGGGGCCCCTaGCCAGGCACAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSPGGGP*PGTAVS
Trigger: GCTCACAGCTGTGCCTGGCCAGGGGCCCCCTCCAGG...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACGTCCATCCCACTGGCTaGGGCCAGGCCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHVHPTG*GQAGGP
Trigger: CGGCCCTCCGGCCTGGCCTCAGCCAGTGGGATGGAC...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCGCGGCACACTGCCTGTaGGGTTGGCCAGCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSAAHCL*GWPARQ
Trigger: CTGGCGAGCTGGCCAACCGCACAGGCAGTGTGCCGC...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGCATGGGACAGAGGCCTGTaGCTGAGGGGGCCGCTCATT +
Preference number: 4 (lower is better)
Translates to: ADPRGPLYASRRRQGPSAWDRGL*LRGPLI
Trigger: AATGAGCGGCCCCCTCAGCCACAGGCCTCTGTCCCA...TGCACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACGTCAGGCTGGCCTCCTaGAGGGGGCCCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHVRLAS*RGPLAR
Trigger: CCTGGCCAGGGGCCCCCTCCAGGAGGCCAGCCTGAC...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTGGCACCGCAGTGGCCTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGAGCCTGCCTCCACCTTaGCCCCTGCAGTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LAPQWPRPETLDEPQPNLSLPPP*PLQFSR
Trigger: CCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCT...CAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAGGCCACTGCGGTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGGTTCAGAGGCCTGCCTaGCCCTGTCCATCCCACTGG +
Preference number: 4 (lower is better)
Translates to: AMGPGTWASLSLARSASGVQRPA*PCPSHW
Trigger: CCAGTGGGATGGACAGGGCCAGGCAGGCCTCTGAAC...CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTGGCACCGCAGTGGCCTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGGGAGGCCCCAGGAGGTaGAAGTTCAGAGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LAPQWPRPETLDEPQPNLGGPRR*KFRGLP
Trigger: AGGCAGGCCTCTGAACTTCCACCTCCTGGGGCCTCC...CAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAGGCCACTGCGGTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGACCTGCCCACACAGGTaGGGGCACAGGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SNGARDMGKPVPGPISIWTCPHR*GHRRSG
Trigger: CCCAGACCTCCTGTGCCCCCACCTGTGTGGGCAGGT...CCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGAGAGCAGGGGCAGGATaGGCGCCAGGAGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: AMGPGTWASLSLARSASGRAGAG*APGAEV
Trigger: TACTTCTGCTCCTGGCGCTCATCCTGCCCCTGCTCT...CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCGGCCAGGCACAGCTGTaGGCGGGATGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASGQAQL*AGWPGL
Trigger: CAGGCCAGGCCATCCCGCTCACAGCTGTGCCTGGCC...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGCAAGGCTCGGAGTGAGCTaGGGGAGGTTCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ADPRGPLYASRRRQGPSARLGVS*GRFQLL
Trigger: CAAGAGCTGGAACCTCCCTCAGCTCACTCCGAGCCT...TGCACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCCAGCTGGAAGATGCCTaGCACGCTGCTCCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: HGSNGARDMGKPVPGPISQLEDA*HAAPVG
Trigger: GCCAACGGGAGCAGCGTGGCAGGCATCTTCCAGCTG...GCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGCAGGGGCCCTCTGTATaGAAGCCGACGCAGACAAGG +
Preference number: 4 (lower is better)
Translates to: AMGPGTWASLSLARSASGQGPSV*KPTQTR
Trigger: CCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTG...CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCTCGGGTGAGCCGGAGTaGGACAGAGGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSSGEPE*DRGLWL
Trigger: CAGCCACAGGCCTCTGTCCCACTCCGGCTCACCCGA...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGTTCTCCAGGCTGGTCCAGGCGCAGGGTaGCACCCTGGGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RRTELKPASTLAPAVLQAGPGAG*HPGAMA
Trigger: GGCCATGGCCCCAGGGTGCCACCCTGCGCCTGGACC...AGCCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGGCCCTCTTAGCAGCCTaGGTCAGGCGCGACTTACCC +
Preference number: 4 (lower is better)
Translates to: AWKQWGPGHGQACPWPDQALLAA*VRRDLP
Trigger: GGGTAAGTCGCGCCTGACCCAGGCTGCTAAGAGGGC...CTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCGCACTGGCACCGCAGTaGCCTCGGCCTGAGACCCTC +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSALAPQ*PRPETL
Trigger: GAGGGTCTCAGGCCGAGGCCACTGCGGTGCCAGTGC...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTATCTGGAATTGGCTaGAGGCCGAGGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSLSGIG*RPRWAA
Trigger: GGCGGCCCACCTCGGCCTTCAGCCAATTCCAGATAG...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCTGCAGCTCCCCAAACTaGAGGGCCCCAGTGACGCGG +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSCSSPN*RAPVTR
Trigger: CCGCGTCACTGGGGCCCTGCAGTTTGGGGAGCTGCA...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGTGCTCAGCTGGAAGATaGCTGCCACGCTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SNGARDMGKPVPGPISIWCSAGR*LPRCSR
Trigger: ACGGGAGCAGCGTGGCAGGCATCTTCCAGCTGAGCA...CCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGGACACCCCTAGCCAGTaGCAGGACTCTGAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: AMGPGTWASLSLARSASGDTPSQ*QDSEVV
Trigger: GACCACTTCAGAGTCCTGGCACTGGCTAGGGGTGTC...CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACGGGCCATGGCCCACCTaGCCACACATGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LGLRPSMSPSLTCSKATDGPWPT*PHMQQS
Trigger: GCTCTGCTGCATGTGTGGGCAGGTGGGCCATGGCCC...GTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACGCTCTCTGGCTTCCCTaGTTCCGTCCGGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHALWLP*FRPGGL
Trigger: GAGGCCGCCCGGACGGAAGCAGGGAAGCCAGAGAGC...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGGCCTGGCTCCACCTTaGGAAAGGTCTCGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SNGARDMGKPVPGPISIWGLAPP*ERSRCH
Trigger: GTGACACCGAGACCTTTCGCAAGGTGGAGCCAGGCC...CCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCAGCAGCGCAGTGGCCTaGTGTTGCCCGTCGGACACC +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSSSAVA*CCPSDT
Trigger: GGTGTCCGACGGGCAACACCAGGCCACTGCGCTGCT...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGTTCTCCAGGCTCAGCCACAGCAAGGGTaGCGGCCACGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRTELKPASTLAPAVLQAQPQQG*RPRPGQ
Trigger: CTGCCCGGGACGTGGCCGCCACCCTTGCTGTGGCTG...AGCCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGGCAGCTGCACCTCGATaGCGGATGGTAGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: AMGPGTWASLSLARSASGAAAPR*RMVGCP
Trigger: TGGACATCCTACCATCCGCCATCGAGGTGCAGCTGC...CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCCCATACTGGGGTCCCTaGATGAGGCGGTATGCTGCC +
Preference number: 4 (lower is better)
Translates to: HGSNGARDMGKPVPGPISPYWGP*MRRYAA
Trigger: GGCAGCATACCGCCTCATCCAGGGACCCCAGTATGG...GCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCAGCATCTAGGACGGTaGGGTCCAGGCGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSQHLGR*GPGAGW
Trigger: CCACCCTGCGCCTGGACCCCACCGTCCTAGATGCTG...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACCAGGGCTGGATGCCATaGGGCCTGGCTCGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHQGWMP*GLARLW
Trigger: CCACAGGCGAGCCAGGCCCCATGGCATCCAGCCCTG...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCAGCTCTTGACTCCACTCTGTCCCGGACCCCTGGGACTATCTCCCAGGACCCTTCAGGAAGCCTCCCTTaGCCACAGCGGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PALDSTLSRTPGTISQDPSGSLP*PQRAQG
Trigger: GCCCTGAGCCCGCTGTGGCCAAGGGAGGCTTCCTGA...AGGGTCCTGGGAGATAGTCCCAGGGGTCCGGGACAGAGTGGAGTCAAGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACATGGGGCCCGGGACATaGGCAAGCCTGTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHMGPGT*ASLSLA
Trigger: GGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCAT...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCAGACAGCACCAGGCATaGAAGCAATGGGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: HGSNGARDMGKPVPGPISRQHQA*KQWGPG
Trigger: TCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCT...GCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGGCCCTGGGAATGAACTaGCTGCAGACCCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: AMGPGTWASLSLARSASGALGMN*LQTLLH
Trigger: ATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGC...CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCTGGCTCCTCCCGATCTaGAACCACCCGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSWLLPI*NHPELL
Trigger: CAGCAGCTCCGGGTGGTTTCAGATCGGGAGGAGCCA...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGAGGAGGAGAAGTTGGTaGAGGCAAAGACCACCTCGC +
Preference number: 4 (lower is better)
Translates to: AMGPGTWASLSLARSASGRRRSW*RQRPPR
Trigger: GCGAGGTGGTCTTTGCCTTCACCAACTTCTCCTCCT...CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGCAGACGTTCACTACGGCTaGTGCATTGACACCCCTAGC +
Preference number: 4 (lower is better)
Translates to: ADPRGPLYASRRRQGPSADVHYG*CIDTPS
Trigger: GCTAGGGGTGTCAATGCATCAGCCGTAGTGAACGTC...TGCACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp CTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAGGGGATACCATCCGGCCTCGGGGACACTaGGCAGGGCCACGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLDWRRSLLLPSTPGDTIRPRGH*AGPRCR
Trigger: CCTACAGCGTGGCCCTGCTCAGTGTCCCCGAGGCCG...GATGGTATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCTGGGCATACACTAGCTaGCCTGCAGCCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSWAYTS*PAASWD
Trigger: GTCCCAGCTGGCTGCAGGGCAGCTAGTGTATGCCCA...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCTCCAGGGCAGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGAGATGCCTGCCACGCTaGTCCCGTTGGCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SSRAGGLNLSLPPPWPLQRCLPR*SRWPRR
Trigger: CCTTCGTGGCCAACGGGAGCAGCGTGGCAGGCATCT...CTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCTGCCCTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCGGGCACCTCCAGGGGTaGCCGCAGCTGCACCTCGAT +
Preference number: 4 (lower is better)
Translates to: LRPSMSPSLTCSKATDTCGHLQG*PQLHLD
Trigger: ATCGAGGTGCAGCTGCGGGCACCCCTGGAGGTGCCC...GCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCGAAACCACCCGGAGCTaGTGCTGGCTCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSETTRS*CWLSEE
Trigger: CTCCTCACTGAGCCAGCAGCAGCTCCGGGTGGTTTC...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCCGCCCACCAGGAGATaGCCATACTGGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASPPTRR*PYWGPW
Trigger: CCAGGGACCCCAGTATGGGCATCTCCTGGTGGGCGG...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTCGGACCACGCGGCCATaGCGGGGTCCCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFRTTRP*RGPSRR
Trigger: CCTCCTGGAGGGACCCCGGCATGGCCGCGTGGTCCG...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGCAAGGACCTGGACGTCATaGTTGCCCGTCTTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: ADPRGPLYASRRRQGPSARTWTS*LPVLLR
Trigger: ACGCAACAAGACGGGCAAGCATGACGTCCAGGTCCT...TGCACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCACCAGCCAGGCCGTTaGGGGGCTTGGCAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASHQPGR*GAWQSG
Trigger: TCCTGACTGCCAAGCCCCGCAACGGCCTGGCTGGTG...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CTGGCACCGCAGTGGCCTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGAGCCCCAGCCTAACCTaGTCCAAAGCCACTGACACA +
Preference number: 4 (lower is better)
Translates to: LAPQWPRPETLDEPQPNLSPSLT*SKATDT
Trigger: TGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCT...CAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAGGCCACTGCGGTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACGCTCAGGCAGCTCCATaGCTGGCCAAGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHAQAAP*LAKPQG
Trigger: CCCCTGAGGCTTGGCCAGCCATGGAGCTGCCTGAGC...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCTTGTGGGGTGCCCGCTaGACCTCGTACTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: HGSNGARDMGKPVPGPISLWGAR*TSYSIS
Trigger: GGAGATTGAGTACGAGGTCCAGCGGGCACCCCACAA...GCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCTGGGCAGGGGTGGGCTaGCCCCATCAGACATGCTCA +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSWAGVG*PHQTCS
Trigger: TGAGCATGTCTGATGGGGCCAGCCCACCCCTGCCCA...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGTTCTCCAGGCTGAGCGCCCCAAAGCTTaGGGCACCTCCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RRTELKPASTLAPAVLQAERPKA*GTSRGA
Trigger: GGCACCCCTGGAGGTGCCCCAAGCTTTGGGGCGCTC...AGCCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACGAAGGCCAGCCGCCCTaGATCCACATCGGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHEGQPP*IHIGLR
Trigger: ACGCAAGCCGATGTGGATTCAGGGCGGCTGGCCTTC...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCACTGGGGTCCCTGGATaGGGCGGTATGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASTGVPG*GGMLPL
Trigger: CAGAGGCAGCATACCGCCTCATCCAGGGACCCCAGT...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCGGAGGTTCCAGCTCTTaGCTCCACTCTGTCCCGGAC +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSGGSSS*LHSVPD
Trigger: GTCCGGGACAGAGTGGAGTCAAGAGCTGGAACCTCC...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCATGGGGCCCTGGGAATaGACTGGCTGCAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASMGPWE*TGCRPS
Trigger: GGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCAT...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCTGCAGGAAGTGGGGCTaGCCAGCATGGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LRPSMSPSLTCSKATDTCCRKWG*PAWRGS
Trigger: GGAGCCCCTCCATGCTGGGCAGCCCCACTTCCTGCA...GCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCGCTCCACCAGCTGGCTaGCCCCGGGCTCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCAPPAG*PRAPSW
Trigger: CCAGGACGGAGCCCGGGGGCAGCCAGCTGGTGGAGC...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTCCACCTTGGCCCCTaGAGTTCTCCAGGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASLHLGP*SSPGSE
Trigger: CTCCGAGCCTGGAGAACTGCAGGGGCCAAGGTGGAG...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCGGCGCTCTCTCCTCTTaGCCTCTACTCCAGGGGATA +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSGALSS*PLLQGI
Trigger: TATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCC...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCTCCAGGGCAGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGGGAAGTTCAGAGGCCTaGCTGGCCCTGTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: SSRAGGLNLSLPPPWPLQGSSEA*LALSIP
Trigger: TGGGATGGACAGGGCCAGGCAGGCCTCTGAACTTCC...CTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCTGCCCTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGTTCTCCAGGCTGAAGACTGGCCCACCTaGCCACACAGGTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RRTELKPASTLAPAVLQAEDWPT*PHRWGH
Trigger: GTGCCCCCACCTGTGTGGGCAGGTGGGCCAGTCTTC...AGCCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGGAGGACAGGCGCATCTaGGTCACCACCAATGTGGAT +
Preference number: 4 (lower is better)
Translates to: AWKQWGPGHGQACPWPDQEDRRI*VTTNVD
Trigger: ATCCACATTGGTGGTGACCCAGATGCGCCTGTCCTC...CTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCTGGCTGGACGGACCCTaGGCAGACAGTCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSWLDGP*ADSQCL
Trigger: CAGACACTGACTGTCTGCCCAGGGTCCGTCCAGCCA...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCAGCTCTTGACTCCACTCTGTCCCGGACCCCTGGGACTATCTCCCAGGACCCTTCATGCTCTGAGCGCTaGGGTGATGGAACGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PALDSTLSRTPGTISQDPSCSER*GDGTLA
Trigger: GGCCAGCGTTCCATCACCCCAGCGCTCAGAGCATGA...AGGGTCCTGGGAGATAGTCCCAGGGGTCCGGGACAGAGTGGAGTCAAGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACGCTGGCCCCTGGAGGTaGGCACGAAAGTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHAGPWR*ARKWKP
Trigger: TGGCTTCCACTTTCGTGCCCACCTCCAGGGGCCAGC...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTCCACGCTGCTCCCGTTaGCCACGAAGGCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFPRCSR*PRRPAA
Trigger: GGCGGCTGGCCTTCGTGGCCAACGGGAGCAGCGTGG...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCAGGAGATGCCCATACTaGGGTCCCTGGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSRRCPY*GPWMRR
Trigger: CCGCCTCATCCAGGGACCCCAGTATGGGCATCTCCT...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTCGGCCTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACCACTGCCTGTGCGGTTaGCCAGCTCGCCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: LGLRPSMSPSLTCSKATDHCLCG*PARQHL
Trigger: TAGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTG...GTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAGGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGTTCTCCAGGCTGGCCGTTGCGGGGCTTaGCAGTCAGGACCTGGACGT +
Preference number: 4 (lower is better)
Translates to: RRTELKPASTLAPAVLQAGRCGA*QSGPGR
Trigger: ACGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCC...AGCCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCGTGAGCGGGATGGCCTaGCCTGGCTCCACCTTGCGA +
Preference number: 4 (lower is better)
Translates to: LRPSMSPSLTCSKATDTCVSGMA*PGSTLR
Trigger: TCGCAAGGTGGAGCCAGGCCAGGCCATCCCGCTCAC...GCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGCCTCACACCCAGTACTaGCCATTCTTAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SNGARDMGKPVPGPISIWPHTQY*PFLRAG
Trigger: CCCTGCCCTTAAGAATGGCCAGTACTGGGTGTGAGG...CCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCTCTGTCCCGGACCCCTaGGACTATCTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASSVPDP*DYLPGP
Trigger: GGGTCCTGGGAGATAGTCCCAGGGGTCCGGGACAGA...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
3UTR CAA 72 bp CAGGGCAGGAGGACTGAACTTAAGCCTGCCTCCACCTaGGCCCCTGCAGTTCTCCAGGCTCGGAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QGRRTELKPAST*APAVLQARSEL
Trigger: CAGCTCACTCCGAGCCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp CCACTGACACATGCATGTTTAGCCCTTGGCCCATCAAGATGGGGCCCTGGGAATCCACATCGGCTTGCGTaGAGCGGGTCACGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PLTHACLALGPSRWGPGNPHRLA*SGSRAP
Trigger: TGGGGCCCGTGACCCGCTTCACGCAAGCCGATGTGG...ATTCCCAGGGCCCCATCTTGATGGGCCAAGGGCTAAACATGCATGTGTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GGCCCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCCAGTGCCAGGACTCTaGAGTGGTCATGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GPSRWGPGNELAADPPPSPVPGL*SGHERR
Trigger: CCTCCTCTCATGACCACTTCAGAGTCCTGGCACTGG...GGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCCCAGCGTAGACCTCTaGCTGAGTGAAGTTCACCAG +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSPSVDL*LSEVHQ
Trigger: CTGGTGAACTTCACTCAGGCAGAGGTCTACGCTGGG...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAGGGGATACCATCCGGAGTCCTGGGAGCTaGGAGCTGAGTGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: LLDWRRSLLLPSTPGDTIRSPGS*ELSGAS
Trigger: GCTCGCTCCACTCAGCTCCCAGCTCCCAGGACTCCG...GATGGTATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCACCACCAATGTGGATaGGGAAGGTATAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: AWKQWGPGHGQACPWPDQHHQCG*GRYRVG
Trigger: CCCCACTCTATACCTTCCCCATCCACATTGGTGGTG...CTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGTTCTCCAGGCTTCGGACACCAACAGCTaGCCCCGGCTGGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: RRTELKPASTLAPAVLQASDTNS*PRLGNC
Trigger: ACAGTTCCCCAGCCGGGGCCAGCTGTTGGTGTCCGA...AGCCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTTGGAAGCCATCCTGCTaGGTGCCCCCACCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGWKPSC*VPPPPW
Trigger: CCACGGCGGTGGGGGCACCCAGCAGGATGGCTTCCA...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTGGATGCCATGGGGCCTaGCTCGCCTGTGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFGCHGA*LACGGA
Trigger: AGCACCCCCACAGGCGAGCCAGGCCCCATGGCATCC...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCAGCTCTTGACTCCACTCTGTCCCGGACCCCTGGGACTATCTCCCAGGACCCTTTGGCAGTCAGGACCTaGACGTCATGCTTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PALDSTLSRTPGTISQDPLAVRT*TSCLPV
Trigger: GACGGGCAAGCATGACGTCCAGGTCCTGACTGCCAA...AGGGTCCTGGGAGATAGTCCCAGGGGTCCGGGACAGAGTGGAGTCAAGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCACTGACACATGCATGTTTAGCCCTTGGCCCATCAAGATGGGGCCCTGGGAATGGCCCGATCAGCATCTaGGCCCAGGCCAGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: PLTHACLALGPSRWGPGNGPISI*AQARPH
Trigger: GTGAGGCCTGGCCTGGGCCCAGATGCTGATCGGGCC...ATTCCCAGGGCCCCATCTTGATGGGCCAAGGGCTAAACATGCATGTGTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp CTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAGGGGATACCATCAAGGCTGTGGCTGGCTaGCCAGCCCGGACTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLDWRRSLLLPSTPGDTIKAVAG*PARTSC
Trigger: ACAGCTAGTCCGGGCTGGTCAGCCAGCCACAGCCTT...GATGGTATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCGCAGAGCCCTCACAGTaGCGTTCACTACGGCTGATG +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASAEPSQ*RSLRLM
Trigger: CATCAGCCGTAGTGAACGTCACTGTGAGGGCTCTGC...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTCCCACAGCTCCAGAGTaGGACTGTCACCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGPTAPE*DCHLRG
Trigger: GCCCCGCAGGTGACAGTCTCACTCTGGAGCTGTGGG...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGGACCCACCCTGCACCCTaGATATATTATCCTATTGGC +
Preference number: 4 (lower is better)
Translates to: AMGPGTWASLSLARSASGTHPAP*IYYPIG
Trigger: GCCAATAGGATAATATATTCAGGGTGCAGGGTGGGT...CCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTGCTCGCCTGTGGGGGTaGTGCTCTCTGGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFARLWG*CSLASL
Trigger: CAGGGAAGCCAGAGAGCAGCACCCCCACAGGCGAGC...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCGGCGGCGAGGACAGCTaGAGCTCTAGGGTATCATGG +
Preference number: 4 (lower is better)
Translates to: LRPSMSPSLTCSKATDTCGGEDS*SSRVSW
Trigger: CCATGATACCCTAGAGCTCCAGCTGTCCTCGCCGCC...GCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCAGCTCTTGACTCCACTCTGTCCCGGACCCCTGGGACTATCTCCCAGGACCCTGGGGTGATGGAACGCTaGCCAAGAGATTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PALDSTLSRTPGTISQDPGVMER*PRDWRH
Trigger: ATGCCTCCAATCTCTTGGCCAGCGTTCCATCACCCC...AGGGTCCTGGGAGATAGTCCCAGGGGTCCGGGACAGAGTGGAGTCAAGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCACCCGGAGCTGCTGCTaGCTCAGTGAGGAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCTRSCC*LSEERP
Trigger: GGGGCGCTCCTCACTGAGCCAGCAGCAGCTCCGGGT...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCAACTGCTCCACCAGCTaGCTGCCCCCGGGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCNCSTS*LPPGSV
Trigger: GACGGAGCCCGGGGGCAGCCAGCTGGTGGAGCAGTT...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCACTGACACATGCATGTTTAGCCCTTGGCCCATCAAGATGGGGCCCTGGGAATGGGCAAGCCTGTCCCTaGCCCGATCAGCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: PLTHACLALGPSRWGPGNGQACP*PDQHLG
Trigger: GCCCAGATGCTGATCGGGCCAGGGACAGGCTTGCCC...ATTCCCAGGGCCCCATCTTGATGGGCCAAGGGCTAAACATGCATGTGTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGTTATGCCTTCTAGACTaGAGGCGCTCTCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: AWKQWGPGHGQACPWPDQLCLLD*RRSLLL
Trigger: CAAGAGGAGAGAGCGCCTCCAGTCTAGAAGGCATAA...CTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCCCCTGTCCATCCCACTaGCTGAGGCCAGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCPCPSH*LRPGRR
Trigger: CCTCCGGCCTGGCCTCAGCCAGTGGGATGGACAGGG...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACTTACATCCCTCACCGTaGTGGCAAAGGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHLHPSP*WQRPLR
Trigger: CCTCAGAGGCCTTTGCCATCACGGTGAGGGATGTAA...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp CAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCACTCTGAAGTGGTCATaGGAGGAGGAGAAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QTAPGMEAMGPGTWASLSTLKWS*EEEKLV
Trigger: CACCAACTTCTCCTCCTCTCATGACCACTTCAGAGT...GGACAGGCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTTCTCCAGGCTCGGAGTaGGCTGAGGGAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGSPGSE*AEGGSS
Trigger: GCTGGAACCTCCCTCAGCTCACTCCGAGCCTGGAGA...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCCCTCCTCCTCCAGCCTaGAGCCGGCTGCCATGTTGC +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCPPPPA*SRLPCC
Trigger: GCAACATGGCAGCCGGCTGCAGGCTGGAGGAGGAGG...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTCACTGCCTCCTGGGCTaGCTCCAGCTGGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGHCLLG*LQLVPS
Trigger: AGAAGGGACCAGCTGGAGGCAGCCCAGGAGGCAGTG...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCTGGCCCCATCAGACATaGTCAGCTGGAAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASWPHQT*SAGRCL
Trigger: CAGGCATCTTCCAGCTGAGCATGTCTGATGGGGCCA...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCACTGACACATGCATGTTTAGCCCTTGGCCCATCAAGATGGGGCCCTGGGAATCTGGATGAGGCGGTATaGTGCCTCTGGCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PLTHACLALGPSRWGPGNLDEAV*CLWLLP
Trigger: CGGGAGGAGCCAGAGGCAGCATACCGCCTCATCCAG...ATTCCCAGGGCCCCATCTTGATGGGCCAAGGGCTAAACATGCATGTGTCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCGGAAGCGCGGCACACTaGCTGTGCGGTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCGSAAH*LCGWPA
Trigger: AGCTGGCCAACCGCACAGGCAGTGTGCCGCGCTTCC...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp ATTGGCTTATGCCTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAAGGCGGGACGCCCTGTaGCCACAGCTCCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: IGLCLLDWRRSLLLPSTPRRDAL*PQLQSE
Trigger: CTCACTCTGGAGCTGTGGGCACAGGGCGTCCCGCCT...TGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAGGCATAAGCCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGTATCCTATTGGCTTATaGCTTCTAGACTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SNGARDMGKPVPGPISIWYPIGL*LLDWRR
Trigger: GCGCCTCCAGTCTAGAAGGCATAAGCCAATAGGATA...CCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTGGACATGGGCAGGGGTaGGCTGGCCCCATCAGACAT +
Preference number: 4 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFGHGQG*AGPIRH
Trigger: ATGTCTGATGGGGCCAGCCCACCCCTGCCCATGTCC...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTCGGGATGGCCTGGCCTaGCTCCACCTTGCGAAAGGT +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGRDGLA*LHLAKG
Trigger: ACCTTTCGCAAGGTGGAGCCAGGCCAGGCCATCCCG...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACGGGCTCCATCAGTCCTaGCTAGCTCAGCACCATGTT +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHGLHQS*LAQHHV
Trigger: AACATGGTGCTGAGCTAGCCAGGACTGATGGAGCCC...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp AGCTCCAGGGCAGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGCTAGCCTTTCTCTACTaGACTGAAGGGGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SSRAGGLNLSLPPPWPLQLAFLY*TEGVWS
Trigger: GGACCAAACCCCTTCAGTTCAGTAGAGAAAGGCTAG...CTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCTGCCCTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACTGGAAGAGCACATCATaGTCTGAGCGCTGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHWKSTS*SERWGD
Trigger: ATCACCCCAGCGCTCAGAGCATGATGTGCTCTTCCA...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTGATGAGGCGGTATGCTaGCTCTGGCTCCTCCCGATC +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGDEAVC*LWLLPI
Trigger: GATCGGGAGGAGCCAGAGGCAGCATACCGCCTCATC...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCCCAGAGCAACCTACCCACCCTGCACCCTGAATATATTATCCTATTGGCTTATGGGCTCAGGGCTGGATaGCATGGGGCCTGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: PQSNLPTLHPEYIILLAYGLRAG*HGAWLA
Trigger: GGCGAGCCAGGCCCCATGGCATCCAGCCCTGAGCCC...ATAAGCCAATAGGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGCTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCTCCAGGGCAGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGAAAGCCACTGACACATaGATGTTTAGCCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSRAGGLNLSLPPPWPLQKATDT*MFSPWP
Trigger: GGGCCAAGGGCTAAACATGCATGTGTCAGTGGCTTT...CTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCTGCCCTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCAGCTCTAGGGTATCATaGGCCTCCCAAAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LRPSMSPSLTCSKATDTCSSRVS*ASQKGS
Trigger: CGAGCCCTTTTGGGAGGCCCATGATACCCTAGAGCT...GCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp ATTGGCTTATGCCTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAAAGGCCTCTGAGGTTTaGGGTCCAGCCACGGAGGCC +
Preference number: 4 (lower is better)
Translates to: IGLCLLDWRRSLLLPSTPKASEV*GPATEA
Trigger: GGCCTCCGTGGCTGGACCCCAAACCTCAGAGGCCTT...TGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAGGCATAAGCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGTTCTCCAGGCTTGGTCTATCTGGAATTaGCTGAAGGCCGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RRTELKPASTLAPAVLQAWSIWN*LKAEVG
Trigger: GCCCACCTCGGCCTTCAGCCAATTCCAGATAGACCA...AGCCTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACCATTGTAAGGCTCAGTaGCAAAGTCCAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHHCKAQ*QSPGRP
Trigger: TGGCCTCCCTGGACTTTGCCACTGAGCCTTACAATG...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCAGACAAAGGGTGGCCTaGGTTGGAGTGGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASRQRVA*VGVEKP
Trigger: TGGCTTTTCCACTCCAACCCAGGCCACCCTTTGTCT...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTAATCTCCCCAGGAGCTaGGTCTGGGTCCACCACACT +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGNLPRS*VWVHHT
Trigger: AGTGTGGTGGACCCAGACTCAGCTCCTGGGGAGATT...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp ATTGGCTTATGCCTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCACGGTCAGCCCCTGAGTaGACGAACAGTACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: IGLCLLDWRRSLLLPSTPRSAPE*TNSTRL
Trigger: GAGGCGAGTACTGTTCGTGCACTCAGGGGCTGACCG...TGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAGGCATAAGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCCCTGGACGTCATGCTTaGCCGTCTTGTTGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: LRPSMSPSLTCSKATDTCPGRHA*PSCCVF
Trigger: GAAAACGCAACAAGACGGGCAAGCATGACGTCCAGG...GCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTAGGTGGGCACGAAAGTaGAAGCCATCCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGRWARK*KPSCWV
Trigger: CACCCAGCAGGATGGCTTCCACTTTCGTGCCCACCT...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAGGGGATACCATCTCGCCCTGGTCTATCTaGAATTGGCTGAAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLDWRRSLLLPSTPGDTISPWSI*NWLKAE
Trigger: CTCGGCCTTCAGCCAATTCCAGATAGACCAGGGCGA...GATGGTATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCCAGGCATGGAAGCAATaGGGCCCGGGACATGGGCAA +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCQAWKQ*GPGHGQ
Trigger: TTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTG...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCCCAGAGCAACCTACCCACCCTGCACCCTGAATATATTATCCTATTGGCTTATAGGGGTGCCCGCAGCTaGACCTCGATGGCGGATGGT +
Preference number: 4 (lower is better)
Translates to: PQSNLPTLHPEYIILLAYRGARS*TSMADG
Trigger: ACCATCCGCCATCGAGGTGCAGCTGCGGGCACCCCT...ATAAGCCAATAGGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGCTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACGCAACCTACCCACCCTaGACCCTGAATATATTATCC +
Preference number: 4 (lower is better)
Translates to: PSRWGPGNELAADPPPSHATYPP*TLNILS
Trigger: GGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGC...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTTCAGACATGCTCAGCTaGAAGATGCCTGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFSDMLS*KMPATL
Trigger: CAGCGTGGCAGGCATCTTCCAGCTGAGCATGTCTGA...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAGGGGATACCATCAGGTCTCTCTTGCTCTaGGGATACTCAGACAGCACC +
Preference number: 4 (lower is better)
Translates to: LLDWRRSLLLPSTPGDTIRSLLL*GYSDST
Trigger: GGTGCTGTCTGAGTATCCCCAGAGCAAGAGAGACCT...GATGGTATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAGGGGATACCATCAAGGGTGGCCTGGGTTaGAGTGGAAAAGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLDWRRSLLLPSTPGDTIKGGLG*SGKARN
Trigger: ATTCCTGGCTTTTCCACTCCAACCCAGGCCACCCTT...GATGGTATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCGGCTGGGGAACTGTGTaGCCTGGAAGAGCACATCAT +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCGWGTV*PGRAHH
Trigger: ATGATGTGCTCTTCCAGGTCACACAGTTCCCCAGCC...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTGAAGGAAGCCGCGGATaGAAGTCTGGCCAACATAGT +
Preference number: 4 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFEGSRG*KSGQHS
Trigger: ACTATGTTGGCCAGACTTGCATCCGCGGCTTCCTTC...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTGTACTTCCTTCTCCTTaGCCTCTTAGCAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGVLPSP*PLSSLG
Trigger: ACCCAGGCTGCTAAGAGGGCAAGGAGAAGGAAGTAC...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTAAGACCACCTCGCCCTaGTCTATCTGGAATTGGCTG +
Preference number: 4 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGKTTSP*SIWNWL
Trigger: CAGCCAATTCCAGATAGACCAGGGCGAGGTGGTCTT...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp CCCCAGAGCAACCTACCCACCCTGCACCCTGAATATATTATCCTATTGGCTTATGATGGCAAAGGCCTCTaGGGTTTGGGGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PQSNLPTLHPEYIILLAYDGKGL*GLGSSH
Trigger: GTGGCTGGACCCCAAACCTCAGAGGCCTTTGCCATC...ATAAGCCAATAGGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGCTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CCCCAGAGCAACCTACCCACCCTGCACCCTGAATATATTATCCTATTGGCTTATGAATCCACATCGGCTTaGGTGAAGCGGGTCACGGGC +
Preference number: 4 (lower is better)
Translates to: PQSNLPTLHPEYIILLAYESTSA*VKRVTG
Trigger: GCCCGTGACCCGCTTCACGCAAGCCGATGTGGATTC...ATAAGCCAATAGGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGCTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp CTGAGACCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCCAGACAAGGGCCCAGTaGATAGTTAAGACACAAACA +
Preference number: 4 (lower is better)
Translates to: LRPSMSPSLTCSKATDTCQTRAQ*IVKTQT
Trigger: TGTTTGTGTCTTAACTATGCACTGGGCCCTTGTCTG...GCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGGTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR GCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCGCTTGCCCGTCTTGTTaGGTTTTCGGAGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCACPSC*VFGGRR
Trigger: TCTTCTACCTCCGAAAACGCAACAAGACGGGCAAGC...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR TCA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCCTTTCTCTACTGAACTaGAGGGGTTTGGTCCCATCA +
Preference number: 4 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCLSLLN*RGLVPS
Trigger: TGATGGGACCAAACCCCTTCAGTTCAGTAGAGAAAG...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCCCAGAGCAACCTACCCACCCTGCACCCTGAATATATTATCCTATTGGCTTATTGCATGTTTAGCCCTTaGCCCATCAAGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PQSNLPTLHPEYIILLAYCMFSP*PIKMGP
Trigger: GGGCCCCATCTTGATGGGCCAAGGGCTAAACATGCA...ATAAGCCAATAGGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGCTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CCA 90 bp CCCCAGAGCAACCTACCCACCCTGCACCCTGAATATATTATCCTATTGGCTTATTTTATCCAGGCTCCATaGAACCAAGTGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PQSNLPTLHPEYIILLAYFIQAP*NQVPPA
Trigger: AGCTGGGGGCACTTGGTTCCATGGAGCCTGGATAAA...ATAAGCCAATAGGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGCTCTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 90 bp CGCGGCCATGCCGGGGTCCCTCCAGGAGGCGGAAGCGCGGCACACTaGCTGTGCGGTTGGCCAGCTCGCCAGCATCTAGGACGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: RGHAGVPPGGGSAAH*LCGWPARQHLGRWG
Trigger: ACCCCACCGTCCTAGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTGTGCCGCGCTTCCGCCTCCTGGAGGGACCCCGGCATGGCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp GGGGTCCCTCCAGGAGGCGGAAGCGCGGCACACTGCCTGTGCGGTTaGCCAGCTCGCCAGCATCTAGGACGGTGGGGTCCAGGCGCAGGG +
Preference number: 5 (lower is better)
Translates to: GVPPGGGSAAHCLCG*PARQHLGRWGPGAG
Trigger: CCCTGCGCCTGGACCCCACCGTCCTAGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTGTGCCGCGCTTCCGCCTCCTGGAGGGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 90 bp CATGCCGGGGTCCCTCCAGGAGGCGGAAGCGCGGCACACTGCCTGTaGGGTTGGCCAGCTCGCCAGCATCTAGGACGGTGGGGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: HAGVPPGGGSAAHCL*GWPARQHLGRWGPG
Trigger: GCCTGGACCCCACCGTCCTAGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTGTGCCGCGCTTCCGCCTCCTGGAGGGACCCCGGCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp GCACACTGCCTGTGCGGTTGGCCAGCTCGCCAGCATCTAGGACGGTaGGGTCCAGGCGCAGGGTGGCACCCTGGGGCCATGGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: AHCLCGWPARQHLGR*GPGAGWHPGAMAHL
Trigger: CAGGTGGGCCATGGCCCCAGGGTGCCACCCTGCGCCTGGACCCCACCGTCCTAGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 90 bp GATGCCTGCCACGCTGCTCCCGTTGGCCACGAAGGCCAGCCGCCCTaGATCCACATCGGCTTGCGTGAAGCGGGTCACGGGCCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: DACHAAPVGHEGQPP*IHIGLREAGHGPQA
Trigger: GGCCTGGGGCCCGTGACCCGCTTCACGCAAGCCGATGTGGATTCAGGGCGGCTGGCCTTCGTGGCCAACGGGAGCAGCGTGGCAGGCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 90 bp CTCCCGTTGGCCACGAAGGCCAGCCGCCCTGAATCCACATCGGCTTaGGTGAAGCGGGTCACGGGCCCCAGGCCACCACCCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LPLATKASRPESTSA*VKRVTGPRPPPTRL
Trigger: CAGCCTGGTGGGTGGTGGCCTGGGGCCCGTGACCCGCTTCACGCAAGCCGATGTGGATTCAGGGCGGCTGGCCTTCGTGGCCAACGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 90 bp CTCAGTGGCAAAGTCCAGGGAGGCCACAGCAGGCGGGACGCCCTGTaGCCACAGCTCCAGAGTGAGACTGTCACCTGCGGGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LSGKVQGGHSRRDAL*PQLQSETVTCGAGG
Trigger: GCCCCCGGCCCCGCAGGTGACAGTCTCACTCTGGAGCTGTGGGCACAGGGCGTCCCGCCTGCTGTGGCCTCCCTGGACTTTGCCACTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp GCCTCCCTTGGCCACAGCGGGCTCAGGGCTGGATGCCATGGGGCCTaGCTCGCCTGTGGGGGTGCTGCTCTCTGGCTTCCCTGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: ASLGHSGLRAGCHGA*LACGGAALWLPCFR
Trigger: ACGGAAGCAGGGAAGCCAGAGAGCAGCACCCCCACAGGCGAGCCAGGCCCCATGGCATCCAGCCCTGAGCCCGCTGTGGCCAAGGGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp GGGCCGACCCCAGGGGCCCTCTGTATGCAAGCCGACGCAGACAAGGGCCCAGTGAGGCTGAGGAAGCCGTaGTGGGGTGCCCGCTGGACC +
Preference number: 5 (lower is better)
Translates to: GPTPGALCMQADADKGPVRLRKP*WGARWT
Trigger: GGTCCAGCGGGCACCCCACAACGGCTTCCTCAGCCT...CACTGGGCCCTTGTCTGCGTCGGCTTGCATACAGAGGGCCCCTGGGGTCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 90 bp CCACCGCCGTGGGCATACACTAGCTGCCCTGCAGCCAGCTGGGACTaGAGGAAGTGGGGCTGCCCAGCATGGAGGGGCTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: PPPWAYTSCPAASWD*RKWGCPAWRGSSDT
Trigger: GGTGTCCGAGGAGCCCCTCCATGCTGGGCAGCCCCACTTCCTGCAGTCCCAGCTGGCTGCAGGGCAGCTAGTGTATGCCCACGGCGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 90 bp GGTGGGGTCCAGGCGCAGGGTGGCACCCTGGGGCCATGGCCCACCTaGCCACACATGCAGCAGAGCCCTCACAGTGACGTTCACTACGGC +
Preference number: 5 (lower is better)
Translates to: GGVQAQGGTLGPWPT*PHMQQSPHSDVHYG
Trigger: GCCGTAGTGAACGTCACTGTGAGGGCTCTGCTGCATGTGTGGGCAGGTGGGCCATGGCCCCAGGGTGCCACCCTGCGCCTGGACCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp CTGAAGGCCGAGGTGGGCCGCCCGCCCACCAGGAGATGCCCATACTaGGGTCCCTGGATGAGGCGGTATGCTGCCTCTGGCTCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: LKAEVGRPPTRRCPY*GPWMRRYAASGSSR
Trigger: TCGGGAGGAGCCAGAGGCAGCATACCGCCTCATCCAGGGACCCCAGTATGGGCATCTCCTGGTGGGCGGGCGGCCCACCTCGGCCTTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp TCGCCAGCATCTAGGACGGTGGGGTCCAGGCGCAGGGTGGCACCCTaGGGCCATGGCCCACCTGCCCACACATGCAGCAGAGCCCTCACA +
Preference number: 5 (lower is better)
Translates to: SPASRTVGSRRRVAP*GHGPPAHTCSRALT
Trigger: TGTGAGGGCTCTGCTGCATGTGTGGGCAGGTGGGCCATGGCCCCAGGGTGCCACCCTGCGCCTGGACCCCACCGTCCTAGATGCTGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 90 bp TGGGCCGCCCGCCCACCAGGAGATGCCCATACTGGGGTCCCTGGATaGGGCGGTATGCTGCCTCTGGCTCCTCCCGATCTGAAACCACCC +
Preference number: 5 (lower is better)
Translates to: WAARPPGDAHTGVPG*GGMLPLAPPDLKPP
Trigger: GGGTGGTTTCAGATCGGGAGGAGCCAGAGGCAGCATACCGCCTCATCCAGGGACCCCAGTATGGGCATCTCCTGGTGGGCGGGCGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 90 bp TGGAATTGGCTGAAGGCCGAGGTGGGCCGCCCGCCCACCAGGAGATaGCCATACTGGGGTCCCTGGATGAGGCGGTATGCTGCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: WNWLKAEVGRPPTRR*PYWGPWMRRYAASG
Trigger: GCCAGAGGCAGCATACCGCCTCATCCAGGGACCCCAGTATGGGCATCTCCTGGTGGGCGGGCGGCCCACCTCGGCCTTCAGCCAATTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp AGGGACATGGGCAGGGGTGGGCTGGCCCCATCAGACATGCTCAGCTaGAAGATGCCTGCCACGCTGCTCCCGTTGGCCACGAAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RDMGRGGLAPSDMLS*KMPATLLPLATKAS
Trigger: GCTGGCCTTCGTGGCCAACGGGAGCAGCGTGGCAGGCATCTTCCAGCTGAGCATGTCTGATGGGGCCAGCCCACCCCTGCCCATGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp GAGGTGGGCCGCCCGCCCACCAGGAGATGCCCATACTGGGGTCCCTaGATGAGGCGGTATGCTGCCTCTGGCTCCTCCCGATCTGAAACC +
Preference number: 5 (lower is better)
Translates to: EVGRPPTRRCPYWGP*MRRYAASGSSRSET
Trigger: GGTTTCAGATCGGGAGGAGCCAGAGGCAGCATACCGCCTCATCCAGGGACCCCAGTATGGGCATCTCCTGGTGGGCGGGCGGCCCACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp TGGGCACGAAAGTGGAAGCCATCCTGCTGGGTGCCCCCACCGCCGTaGGCATACACTAGCTGCCCTGCAGCCAGCTGGGACTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: WARKWKPSCWVPPPP*AYTSCPAASWDCRK
Trigger: CTTCCTGCAGTCCCAGCTGGCTGCAGGGCAGCTAGTGTATGCCCACGGCGGTGGGGGCACCCAGCAGGATGGCTTCCACTTTCGTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp TACTCAATCTCCCCAGGAGCTGAGTCTGGGTCCACCACACTCAGCTaGGCCCGGGAGATGGGGGCACGAGAGCCTCGGGTGAGCCGGAGT +
Preference number: 5 (lower is better)
Translates to: YSISPGAESGSTTLS*AREMGAREPRVSRS
Trigger: ACTCCGGCTCACCCGAGGCTCTCGTGCCCCCATCTCCCGGGCCCAGCTGAGTGTGGTGGACCCAGACTCAGCTCCTGGGGAGATTGAGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp AGGCCACCACCCACCAGGCTGAGGAAGCCGTTGTGGGGTGCCCGCTaGACCTCGTACTCAATCTCCCCAGGAGCTGAGTCTGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: RPPPTRLRKPLWGAR*TSYSISPGAESGST
Trigger: GGTGGACCCAGACTCAGCTCCTGGGGAGATTGAGTACGAGGTCCAGCGGGCACCCCACAACGGCTTCCTCAGCCTGGTGGGTGGTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp CCAGCTCTTGACTCCACTCTGTCCCGGACCCCTGGGACTATCTCCCAGGACCCTAGGCCGTTGCGGGGCTaGGCAGTCAGGACCTGGACG +
Preference number: 5 (lower is better)
Translates to: PALDSTLSRTPGTISQDPRPLRG*AVRTWT
Trigger: CGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCCT...AGGGTCCTGGGAGATAGTCCCAGGGGTCCGGGACAGAGTGGAGTCAAGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 90 bp CTGGCTCCACCTTGCGAAAGGTCTCGGTGTCACCAGCCAGGCCGTTaGGGGGCTTGGCAGTCAGGACCTGGACGTCATGCTTGCCCGTCT +
Preference number: 5 (lower is better)
Translates to: LAPPCERSRCHQPGR*GAWQSGPGRHACPS
Trigger: AGACGGGCAAGCATGACGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCCTGGCTGGTGACACCGAGACCTTTCGCAAGGTGGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp AGCAATGGGGCCCGGGACATGGGCAAGCCTGTCCCTGGCCCGATCAGCATCTGGACGCTGGCCAAGAGATaGGAGGCATCCAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SNGARDMGKPVPGPISIWTLAKR*EASRAA
Trigger: GGCTGCTCTGGATGCCTCCAATCTCTTGGCCAGCGT...CCAGATGCTGATCGGGCCAGGGACAGGCTTGCCCATGTCCCGGGCCCCATTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTCAGGAAGCCTCCCTaGGCCACAGCGGGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASLRKPP*ATAGSG
Trigger: CCCTGAGCCCGCTGTGGCCAAGGGAGGCTTCCTGAG...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp CTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAGGGGATACCATCGCTGGGCGGCAGGACTaGCGAGGAGCCAGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: LLDWRRSLLLPSTPGDTIAGRQD*RGASGV
Trigger: GACTCCGCTGGCTCCTCGCAAGTCCTGCCGCCCAGC...GATGGTATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp AGCTCCAGGGCAGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGAAGCCTGCCTCCACCTaGGCCCCTGCAGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SSRAGGLNLSLPPPWPLQKPAST*APAVLQ
Trigger: CTGGAGAACTGCAGGGGCCAAGGTGGAGGCAGGCTT...CTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCTGCCCTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp AAGTTGGTGAAGGCAAAGACCACCTCGCCCTGGTCTATCTGGAATTaGCTGAAGGCCGAGGTGGGCCGCCCGCCCACCAGGAGATGCCCA +
Preference number: 5 (lower is better)
Translates to: KLVKAKTTSPWSIWN*LKAEVGRPPTRRCP
Trigger: TGGGCATCTCCTGGTGGGCGGGCGGCCCACCTCGGCCTTCAGCCAATTCCAGATAGACCAGGGCGAGGTGGTCTTTGCCTTCACCAACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp GAGGAGAAGTTGGTGAAGGCAAAGACCACCTCGCCCTGGTCTATCTaGAATTGGCTGAAGGCCGAGGTGGGCCGCCCGCCCACCAGGAGA +
Preference number: 5 (lower is better)
Translates to: EEKLVKAKTTSPWSI*NWLKAEVGRPPTRR
Trigger: TCTCCTGGTGGGCGGGCGGCCCACCTCGGCCTTCAGCCAATTCCAGATAGACCAGGGCGAGGTGGTCTTTGCCTTCACCAACTTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 90 bp CCTTGCGAAAGGTCTCGGTGTCACCAGCCAGGCCGTTGCGGGGCTTaGCAGTCAGGACCTGGACGTCATGCTTGCCCGTCTTGTTGCGTT +
Preference number: 5 (lower is better)
Translates to: PCERSRCHQPGRCGA*QSGPGRHACPSCCV
Trigger: AACGCAACAAGACGGGCAAGCATGACGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCCTGGCTGGTGACACCGAGACCTTTCGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCGCCACGCTGCTCCCGTaGGCCACGAAGGCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCATLLP*ATKASR
Trigger: GCGGCTGGCCTTCGTGGCCAACGGGAGCAGCGTGGC...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp CCCTCGATGAGCCCCAGCCTAACCTGCTCCAAAGCCACTGACACATGCATGTTTTCACCAGCCAGGCCGTaGCGGGGCTTGGCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: PSMSPSLTCSKATDTCMFSPARP*RGLAVR
Trigger: CCTGACTGCCAAGCCCCGCAACGGCCTGGCTGGTGA...AAACATGCATGTGTCAGTGGCTTTGGAGCAGGTTAGGCTGGGGCTCATCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACTGGCCTGGCTCCACCTaGCGAAAGGTCTCGGTGTCA +
Preference number: 5 (lower is better)
Translates to: PSRWGPGNELAADPPPSHWPGST*RKVSVS
Trigger: TGACACCGAGACCTTTCGCAAGGTGGAGCCAGGCCA...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp AGCTCCAGGGCAGGAGGACTGAACTTAAGCCTGCCTCCACCTTGGCCCCTGCAGTTCTTAAGGGCAGGGTaGGGTGTCCGGCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: SSRAGGLNLSLPPPWPLQFLRAG*GVRQNC
Trigger: GCAGTTCTGCCGGACACCCAACCCTGCCCTTAAGAA...CTGCAGGGGCCAAGGTGGAGGCAGGCTTAAGTTCAGTCCTCCTGCCCTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp GATACTCAGACAGCACCAGGCATGGAAGCAATGGGGCCCGGGACATGGGCAAGCCTGGTCTATCTGGAATaGGCTGAAGGCCGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: DTQTAPGMEAMGPGTWASLVYLE*AEGRGG
Trigger: CCCACCTCGGCCTTCAGCCAATTCCAGATAGACCAG...GCTTGCCCATGTCCCGGGCCCCATTGCTTCCATGCCTGGTGCTGTCTGAGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp CCATCAAGATGGGGCCCTGGGAATGAACTGGCTGCAGACCCTCCTCCATCCCACACTACGGCTGATGCATaGACACCCCTAGCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: PSRWGPGNELAADPPPSHTTADA*TPLASA
Trigger: GGCACTGGCTAGGGGTGTCAATGCATCAGCCGTAGT...GTGGGATGGAGGAGGGTCTGCAGCCAGTTCATTCCCAGGGCCCCATCTTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 90 bp TGCCCACACATGCAGCAGAGCCCTCACAGTGACGTTCACTACGGCTaGTGCATTGACACCCCTAGCCAGTGCCAGGACTCTGAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: CPHMQQSPHSDVHYG*CIDTPSQCQDSEVV
Trigger: GACCACTTCAGAGTCCTGGCACTGGCTAGGGGTGTCAATGCATCAGCCGTAGTGAACGTCACTGTGAGGGCTCTGCTGCATGTGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTAGGCGCTCTCTCCTCTaGCCCTCTACTCCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGRRSLL*PSTPGD
Trigger: ATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCT...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp CTTCTAGACTGGAGGCGCTCTCTCCTCTTGCCCTCTACTCCAGGGGATACCATCGAGGTTACCCTGGTTTaGACAGCCCAAACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLDWRRSLLLPSTPGDTIEVTLV*TAQTSS
Trigger: GGAGCTGGTTTGGGCTGTCAAAACCAGGGTAACCTC...GATGGTATCCCCTGGAGTAGAGGGCAAGAGGAGAGAGCGCCTCCAGTCTAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCGGGACCCAGAGACCTTaGTTCTTCCAGAGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCGTQRP*FFQRWL
Trigger: CAGCCACCTCTGGAAGAACAAAGGTCTCTGGGTCCC...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp CCCCAGAGCAACCTACCCACCCTGCACCCTGAATATATTATCCTATTGGCTTATACACTGCCTGTGCGGTaGGCCAGCTCGCCAGCATCT +
Preference number: 5 (lower is better)
Translates to: PQSNLPTLHPEYIILLAYTLPVR*ASSPAS
Trigger: AGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTGT...ATAAGCCAATAGGATAATATATTCAGGGTGCAGGGTGGGTAGGTTGCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp GACTTACCCAAGGTCACAGACCCAGGACCCAGAGTCATGACCCATGTAGGAGGTACCTGGACGTCATGCTaGCCCGTCTTGTTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: DLPKVTDPGPRVMTHVGGTWTSC*PVLLRF
Trigger: AAAACGCAACAAGACGGGCAAGCATGACGTCCAGGT...ACCTCCTACATGGGTCATGACTCTGGGTCCTGGGTCTGTGACCTTGGGTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS-3UTR CAA 90 bp AGCTGTCCAGAGCCTCCAAAGCACTGTTTATCCAGGCTCCATGGAACCAAGTGCGTCTCCAGGTCTCTCTaGCTCTGGGGATACTCAGAC +
Preference number: 5 (lower is better)
Translates to: SCPEPPKHCLSRLHGTKCVSRSL*LWGYSD
Trigger: GTCTGAGTATCCCCAGAGCAAGAGAGACCTGGAGAC...GCACTTGGTTCCATGGAGCCTGGATAAACAGTGCTTTGGAGGCTCTGGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 90 bp CGGGGTCCCTCCAGGAGGCGGAAGCGCGGCACACTGCCTGTGCGGTaGGCCAGCTCGCCAGCATCTAGGACGGTGGGGTCCAGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: RGPSRRRKRGTLPVR*ASSPASRTVGSRRR
Trigger: CCTGCGCCTGGACCCCACCGTCCTAGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTGTGCCGCGCTTCCGCCTCCTGGAGGGACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp GGCCACAGCGGGCTCAGGGCTGGATGCCATGGGGCCTaGCTCGCCTGTGGGGGTGCTGCTCTCTGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: GHSGLRAGCHGA*LACGGAALWLP
Trigger: GGGAAGCCAGAGAGCAGCACCCCCACAGGCGAGCCAGGCCCCATGGCATCCAGCCCTGAGCCCGCTGTGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 72 bp GCTTCCCTGCTTCCGTCCGGGCGGCCTCGGGGACACTaGGCAGGGCCACGCTGTAGGGCCGGGCAGCATTGT +
Preference number: 6 (lower is better)
Translates to: ASLLPSGRPRGH*AGPRCRAGQHC
Trigger: ACAATGCTGCCCGGCCCTACAGCGTGGCCCTGCTCAGTGTCCCCGAGGCCGCCCGGACGGAAGCAGGGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp GCCACGAAGGCCAGCCGCCCTGAATCCACATCGGCTTaGGTGAAGCGGGTCACGGGCCCCAGGCCACCACCC +
Preference number: 6 (lower is better)
Translates to: ATKASRPESTSA*VKRVTGPRPPP
Trigger: GGGTGGTGGCCTGGGGCCCGTGACCCGCTTCACGCAAGCCGATGTGGATTCAGGGCGGCTGGCCTTCGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp CTGTGCGGTTGGCCAGCTCGCCAGCATCTAGGACGGTaGGGTCCAGGCGCAGGGTGGCACCCTGGGGCCATG +
Preference number: 6 (lower is better)
Translates to: LCGWPARQHLGR*GPGAGWHPGAM
Trigger: CATGGCCCCAGGGTGCCACCCTGCGCCTGGACCCCACCGTCCTAGATGCTGGCGAGCTGGCCAACCGCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 72 bp CGAAGGCCAGCCGCCCTGAATCCACATCGGCTTGCGTaGAGCGGGTCACGGGCCCCAGGCCACCACCCACCA +
Preference number: 6 (lower is better)
Translates to: RRPAALNPHRLA*SGSRAPGHHPP
Trigger: TGGTGGGTGGTGGCCTGGGGCCCGTGACCCGCTTCACGCAAGCCGATGTGGATTCAGGGCGGCTGGCCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp GTCCCTCCAGGAGGCGGAAGCGCGGCACACTGCCTGTaGGGTTGGCCAGCTCGCCAGCATCTAGGACGGTGG +
Preference number: 6 (lower is better)
Translates to: VPPGGGSAAHCL*GWPARQHLGRW
Trigger: CCACCGTCCTAGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTGTGCCGCGCTTCCGCCTCCTGGAGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp GCAGGACTTGCGAGGAGCCAGCGGAGTCCTGGGAGCTaGGAGCTGAGTGGAGCGAGCGCGGCTCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: AGLARSQRSPGS*ELSGASAALLL
Trigger: CAGGAGCAGAGCCGCGCTCGCTCCACTCAGCTCCCAGCTCCCAGGACTCCGCTGGCTCCTCGCAAGTCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp TCCCCAGGAGCTGAGTCTGGGTCCACCACACTCAGCTaGGCCCGGGAGATGGGGGCACGAGAGCCTCGGGTG +
Preference number: 6 (lower is better)
Translates to: SPGAESGSTTLS*AREMGAREPRV
Trigger: CACCCGAGGCTCTCGTGCCCCCATCTCCCGGGCCCAGCTGAGTGTGGTGGACCCAGACTCAGCTCCTGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp AGCTGCTGCTGGCTCAGTGAGGAGCGCCCCAAAGCTTaGGGCACCTCCAGGGGTGCCCGCAGCTGCACCTCG +
Preference number: 6 (lower is better)
Translates to: SCCWLSEERPKA*GTSRGARSCTS
Trigger: CGAGGTGCAGCTGCGGGCACCCCTGGAGGTGCCCCAAGCTTTGGGGCGCTCCTCACTGAGCCAGCAGCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp TCTAGGACGGTGGGGTCCAGGCGCAGGGTGGCACCCTaGGGCCATGGCCCACCTGCCCACACATGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: SRTVGSRRRVAP*GHGPPAHTCSR
Trigger: TCTGCTGCATGTGTGGGCAGGTGGGCCATGGCCCCAGGGTGCCACCCTGCGCCTGGACCCCACCGTCCTAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp CCAGGAGGCGGAAGCGCGGCACACTGCCTGTGCGGTTaGCCAGCTCGCCAGCATCTAGGACGGTGGGGTCCA +
Preference number: 6 (lower is better)
Translates to: PGGGSAAHCLCG*PARQHLGRWGP
Trigger: TGGACCCCACCGTCCTAGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTGTGCCGCGCTTCCGCCTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 72 bp TCCAGGAGGCGGAAGCGCGGCACACTGCCTGTGCGGTaGGCCAGCTCGCCAGCATCTAGGACGGTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: SRRRKRGTLPVR*ASSPASRTVGS
Trigger: GGACCCCACCGTCCTAGATGCTGGCGAGCTGGCCAACCGCACAGGCAGTGTGCCGCGCTTCCGCCTCCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 90 bp TGGCCAGGCACAGCTGTGAGCGGGATGGCCTGGCCTGGCTCCACCTaGCGAAAGGTCTCGGTGTCACCAGCCAGGCCGTTGCGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: WPGTAVSGMAWPGST*RKVSVSPARPLRGL
Trigger: CAAGCCCCGCAACGGCCTGGCTGGTGACACCGAGACCTTTCGCAAGGTGGAGCCAGGCCAGGCCATCCCGCTCACAGCTGTGCCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 72 bp CACGCTGCTCCCGTTGGCCACGAAGGCCAGCCGCCCTaGATCCACATCGGCTTGCGTGAAGCGGGTCACGGG +
Preference number: 6 (lower is better)
Translates to: HAAPVGHEGQPP*IHIGLREAGHG
Trigger: CCCGTGACCCGCTTCACGCAAGCCGATGTGGATTCAGGGCGGCTGGCCTTCGTGGCCAACGGGAGCAGCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp CAGGCGCAGGGTGGCACCCTGGGGCCATGGCCCACCTaGCCACACATGCAGCAGAGCCCTCACAGTGACGTT +
Preference number: 6 (lower is better)
Translates to: QAQGGTLGPWPT*PHMQQSPHSDV
Trigger: AACGTCACTGTGAGGGCTCTGCTGCATGTGTGGGCAGGTGGGCCATGGCCCCAGGGTGCCACCCTGCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp GGGGCACCTCCAGGGGTGCCCGCAGCTGCACCTCGATaGCGGATGGTAGGATGTCCACAGCCAGGGACATGG +
Preference number: 6 (lower is better)
Translates to: GAPPGVPAAAPR*RMVGCPQPGTW
Trigger: CCATGTCCCTGGCTGTGGACATCCTACCATCCGCCATCGAGGTGCAGCTGCGGGCACCCCTGGAGGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp CGCCCGCCCACCAGGAGATGCCCATACTGGGGTCCCTaGATGAGGCGGTATGCTGCCTCTGGCTCCTCCCGA +
Preference number: 6 (lower is better)
Translates to: RPPTRRCPYWGP*MRRYAASGSSR
Trigger: TCGGGAGGAGCCAGAGGCAGCATACCGCCTCATCCAGGGACCCCAGTATGGGCATCTCCTGGTGGGCGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp GGAGGTGGGCACGAAAGTGGAAGCCATCCTGCTGGGTaGCCCCACCGCCGTGGGCATACACTAGCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: GGGHESGSHPAG*PHRRGHTLAAL
Trigger: CAGGGCAGCTAGTGTATGCCCACGGCGGTGGGGGCACCCAGCAGGATGGCTTCCACTTTCGTGCCCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp GGGACATGGGCAGGGGTGGGCTGGCCCCATCAGACATaGTCAGCTGGAAGATGCCTGCCACGCTGCTCCCGT +
Preference number: 6 (lower is better)
Translates to: GTWAGVGWPHQT*SAGRCLPRCSR
Trigger: ACGGGAGCAGCGTGGCAGGCATCTTCCAGCTGAGCATGTCTGATGGGGCCAGCCCACCCCTGCCCATGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp AAAGTCCAGGGAGGCCACAGCAGGCGGGACGCCCTGTaGCCACAGCTCCAGAGTGAGACTGTCACCTGCGGG +
Preference number: 6 (lower is better)
Translates to: KVQGGHSRRDAL*PQLQSETVTCG
Trigger: CCCGCAGGTGACAGTCTCACTCTGGAGCTGTGGGCACAGGGCGTCCCGCCTGCTGTGGCCTCCCTGGACTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp AAGTGGAAGCCATCCTGCTGGGTGCCCCCACCGCCGTaGGCATACACTAGCTGCCCTGCAGCCAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: KWKPSCWVPPPP*AYTSCPAASWD
Trigger: GTCCCAGCTGGCTGCAGGGCAGCTAGTGTATGCCCACGGCGGTGGGGGCACCCAGCAGGATGGCTTCCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp ACATCCCTCACCGTGATGGCAAAGGCCTCTGAGGTTTaGGGTCCAGCCACGGAGGCCCCTGCTGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: TSLTVMAKASEV*GPATEAPAGPW
Trigger: CCAGGGGCCAGCAGGGGCCTCCGTGGCTGGACCCCAAACCTCAGAGGCCTTTGCCATCACGGTGAGGGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp CCACGCTGTAGGGCCGGGCAGCATTGTAAGGCTCAGTaGCAAAGTCCAGGGAGGCCACAGCAGGCGGGACGC +
Preference number: 6 (lower is better)
Translates to: PRCRAGQHCKAQ*QSPGRPQQAGR
Trigger: GCGTCCCGCCTGCTGTGGCCTCCCTGGACTTTGCCACTGAGCCTTACAATGCTGCCCGGCCCTACAGCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp CTGGCCAGGCACAGCTGTGAGCGGGATGGCCTGGCCTaGCTCCACCTTGCGAAAGGTCTCGGTGTCACCAGC +
Preference number: 6 (lower is better)
Translates to: LARHSCERDGLA*LHLAKGLGVTS
Trigger: GCTGGTGACACCGAGACCTTTCGCAAGGTGGAGCCAGGCCAGGCCATCCCGCTCACAGCTGTGCCTGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 90 bp CCTGGCTCCACCTTGCGAAAGGTCTCGGTGTCACCAGCCAGGCCGTaGCGGGGCTTGGCAGTCAGGACCTGGACGTCATGCTTGCCCGTC +
Preference number: 6 (lower is better)
Translates to: PGSTLRKVSVSPARP*RGLAVRTWTSCLPV
Trigger: GACGGGCAAGCATGACGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCCTGGCTGGTGACACCGAGACCTTTCGCAAGGTGGAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 72 bp TGCCCGCTGGACCTCGTACTCAATCTCCCCAGGAGCTaGGTCTGGGTCCACCACACTCAGCTGGGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: CPLDLVLNLPRS*VWVHHTQLGPG
Trigger: TCCCGGGCCCAGCTGAGTGTGGTGGACCCAGACTCAGCTCCTGGGGAGATTGAGTACGAGGTCCAGCGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp GCCTCTGGCTCCTCCCGATCTGAAACCACCCGGAGCTaGTGCTGGCTCAGTGAGGAGCGCCCCAAAGCTTGG +
Preference number: 6 (lower is better)
Translates to: ASGSSRSETTRS*CWLSEERPKAW
Trigger: CCAAGCTTTGGGGCGCTCCTCACTGAGCCAGCAGCAGCTCCGGGTGGTTTCAGATCGGGAGGAGCCAGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp TGCTCAGCTGGAAGATGCCTGCCACGCTGCTCCCGTTaGCCACGAAGGCCAGCCGCCCTGAATCCACATCGG +
Preference number: 6 (lower is better)
Translates to: CSAGRCLPRCSR*PRRPAALNPHR
Trigger: CCGATGTGGATTCAGGGCGGCTGGCCTTCGTGGCCAACGGGAGCAGCGTGGCAGGCATCTTCCAGCTGAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp AAGGCAAAGACCACCTCGCCCTGGTCTATCTGGAATTaGCTGAAGGCCGAGGTGGGCCGCCCGCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: KAKTTSPWSIWN*LKAEVGRPPTR
Trigger: CCTGGTGGGCGGGCGGCCCACCTCGGCCTTCAGCCAATTCCAGATAGACCAGGGCGAGGTGGTCTTTGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp AGGTCTCGGTGTCACCAGCCAGGCCGTTGCGGGGCTTaGCAGTCAGGACCTGGACGTCATGCTTGCCCGTCT +
Preference number: 6 (lower is better)
Translates to: RSRCHQPGRCGA*QSGPGRHACPS
Trigger: AGACGGGCAAGCATGACGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCCTGGCTGGTGACACCGAGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 72 bp GAAGGCAAAGACCACCTCGCCCTGGTCTATCTGGAATaGGCTGAAGGCCGAGGTGGGCCGCCCGCCCACCAG +
Preference number: 6 (lower is better)
Translates to: EGKDHLALVYLE*AEGRGGPPAHQ
Trigger: CTGGTGGGCGGGCGGCCCACCTCGGCCTTCAGCCAATTCCAGATAGACCAGGGCGAGGTGGTCTTTGCCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 72 bp ACAGCTGTGAGCGGGATGGCCTGGCCTGGCTCCACCTaGCGAAAGGTCTCGGTGTCACCAGCCAGGCCGTTG +
Preference number: 6 (lower is better)
Translates to: TAVSGMAWPGST*RKVSVSPARPL
Trigger: CAACGGCCTGGCTGGTGACACCGAGACCTTTCGCAAGGTGGAGCCAGGCCAGGCCATCCCGCTCACAGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 72 bp CGGACACCAACAGCTGGCCCCGGCTGGGGAACTGTGTaGCCTGGAAGAGCACATCATGCTCTGAGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: RTPTAGPGWGTV*PGRAHHALSAG
Trigger: CCCAGCGCTCAGAGCATGATGTGCTCTTCCAGGTCACACAGTTCCCCAGCCGGGGCCAGCTGTTGGTGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 72 bp CAAAGACCACCTCGCCCTGGTCTATCTGGAATTGGCTaGAGGCCGAGGTGGGCCGCCCGCCCACCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: QRPPRPGLSGIG*RPRWAARPPGD
Trigger: ATCTCCTGGTGGGCGGGCGGCCCACCTCGGCCTTCAGCCAATTCCAGATAGACCAGGGCGAGGTGGTCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp CCTTGCGAAAGGTCTCGGTGTCACCAGCCAGGCCGTTaGGGGGCTTGGCAGTCAGGACCTGGACGTCATGCT +
Preference number: 6 (lower is better)
Translates to: PCERSRCHQPGR*GAWQSGPGRHA
Trigger: AGCATGACGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCCTGGCTGGTGACACCGAGACCTTTCGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp CCCACCAGGCTGAGGAAGCCGTTGTGGGGTGCCCGCTaGACCTCGTACTCAATCTCCCCAGGAGCTGAGTCT +
Preference number: 6 (lower is better)
Translates to: PTRLRKPLWGAR*TSYSISPGAES
Trigger: AGACTCAGCTCCTGGGGAGATTGAGTACGAGGTCCAGCGGGCACCCCACAACGGCTTCCTCAGCCTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp TTGGTGAAGGCAAAGACCACCTCGCCCTGGTCTATCTaGAATTGGCTGAAGGCCGAGGTGGGCCGCCCGCCC +
Preference number: 6 (lower is better)
Translates to: LVKAKTTSPWSI*NWLKAEVGRPP
Trigger: GGGCGGGCGGCCCACCTCGGCCTTCAGCCAATTCCAGATAGACCAGGGCGAGGTGGTCTTTGCCTTCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp CCAGCCAGGCCGTTGCGGGGCTTGGCAGTCAGGACCTaGACGTCATGCTTGCCCGTCTTGTTGCGTTTTCGG +
Preference number: 6 (lower is better)
Translates to: PARPLRGLAVRT*TSCLPVLLRFR
Trigger: CCGAAAACGCAACAAGACGGGCAAGCATGACGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCCTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 72 bp ACCTTGCGAAAGGTCTCGGTGTCACCAGCCAGGCCGTaGCGGGGCTTGGCAGTCAGGACCTGGACGTCATGC +
Preference number: 6 (lower is better)
Translates to: TLRKVSVSPARP*RGLAVRTWTSC
Trigger: GCATGACGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCCTGGCTGGTGACACCGAGACCTTTCGCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 90 bp ACATCATGCTCTGAGCGCTGGGGTGATGGAACGCTGGCCAAGAGATaGGAGGCATCCAGAGCAGCCACGGTGATCCTGGCCCGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: TSCSERWGDGTLAKR*EASRAATVILARWP
Trigger: GGGCCAGCGGGCCAGGATCACCGTGGCTGCTCTGGATGCCTCCAATCTCTTGGCCAGCGTTCCATCACCCCAGCGCTCAGAGCATGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 90 bp GAAGTTGGTGAAGGCAAAGACCACCTCGCCCTGGTCTATCTGGAATaGGCTGAAGGCCGAGGTGGGCCGCCCGCCCACCAGGAGATGCCC +
Preference number: 6 (lower is better)
Translates to: EVGEGKDHLALVYLE*AEGRGGPPAHQEMP
Trigger: GGGCATCTCCTGGTGGGCGGGCGGCCCACCTCGGCCTTCAGCCAATTCCAGATAGACCAGGGCGAGGTGGTCTTTGCCTTCACCAACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 90 bp ACCTTGCGAAAGGTCTCGGTGTCACCAGCCAGGCCGTTGCGGGGCTaGGCAGTCAGGACCTGGACGTCATGCTTGCCCGTCTTGTTGCGT +
Preference number: 6 (lower is better)
Translates to: TLRKVSVSPARPLRG*AVRTWTSCLPVLLR
Trigger: ACGCAACAAGACGGGCAAGCATGACGTCCAGGTCCTGACTGCCAAGCCCCGCAACGGCCTGGCTGGTGACACCGAGACCTTTCGCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 72 bp TCTGAGCGCTGGGGTGATGGAACGCTGGCCAAGAGATaGGAGGCATCCAGAGCAGCCACGGTGATCCTGGCC +
Preference number: 6 (lower is better)
Translates to: SERWGDGTLAKR*EASRAATVILA
Trigger: GGCCAGGATCACCGTGGCTGCTCTGGATGCCTCCAATCTCTTGGCCAGCGTTCCATCACCCCAGCGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 72 bp CTCATTTACATCCCTCACCGTGATGGCAAAGGCCTCTaGGGTTTGGGGTCCAGCCACGGAGGCCCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LIYIPHRDGKGL*GLGSSHGGPCW
Trigger: CCAGCAGGGGCCTCCGTGGCTGGACCCCAAACCTCAGAGGCCTTTGCCATCACGGTGAGGGATGTAAATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS TCA 72 bp GTGGCTGAGGGGGCCGCTCATTTACATCCCTCACCGTaGTGGCAAAGGCCTCTGAGGTTTGGGGTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: VAEGAAHLHPSP*WQRPLRFGVQP
Trigger: TGGCTGGACCCCAAACCTCAGAGGCCTTTGCCATCACGGTGAGGGATGTAAATGAGCGGCCCCCTCAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp CGGCTGGGGAACTGTGTGACCTGGAAGAGCACATCATaGTCTGAGCGCTGGGGTGATGGAACGCTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: RLGNCVTWKSTS*SERWGDGTLAK
Trigger: CTTGGCCAGCGTTCCATCACCCCAGCGCTCAGAGCATGATGTGCTCTTCCAGGTCACACAGTTCCCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp GCACATCATGCTCTGAGCGCTGGGGTGATGGAACGCTaGCCAAGAGATTGGAGGCATCCAGAGCAGCCACGG +
Preference number: 6 (lower is better)
Translates to: AHHALSAGVMER*PRDWRHPEQPR
Trigger: CCGTGGCTGCTCTGGATGCCTCCAATCTCTTGGCCAGCGTTCCATCACCCCAGCGCTCAGAGCATGATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS GCA 72 bp TGCGGGGCTTGGCAGTCAGGACCTGGACGTCATGCTTaGCCGTCTTGTTGCGTTTTCGGAGGTAGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: CGAWQSGPGRHA*PSCCVFGGRRA
Trigger: TGCTCTTCTACCTCCGAAAACGCAACAAGACGGGCAAGCATGACGTCCAGGTCCTGACTGCCAAGCCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp GAGGAGAAGTTGGTGAAGGCAAAGACCACCTCGCCCTaGTCTATCTGGAATTGGCTGAAGGCCGAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: EEKLVKAKTTSP*SIWNWLKAEVG
Trigger: GCCCACCTCGGCCTTCAGCCAATTCCAGATAGACCAGGGCGAGGTGGTCTTTGCCTTCACCAACTTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CCA 72 bp TGTGTGACCTGGAAGAGCACATCATGCTCTGAGCGCTaGGGTGATGGAACGCTGGCCAAGAGATTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: CVTWKSTSCSER*GDGTLAKRLEA
Trigger: TGCCTCCAATCTCTTGGCCAGCGTTCCATCACCCCAGCGCTCAGAGCATGATGTGCTCTTCCAGGTCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308508.5
CDS CAA 72 bp AGAGCCCTCACAGTGACGTTCACTACGGCTGATGCATaGACACCCCTAGCCAGTGCCAGGACTCTGAAGTGG +
Preference number: 6 (lower is better)
Translates to: RALTVTFTTADA*TPLASARTLKW
Trigger: CCACTTCAGAGTCCTGGCACTGGCTAGGGGTGTCAATGCATCAGCCGTAGTGAACGTCACTGTGAGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308508.5