Pregenerated sensors for CSNKA2IP (Homo sapiens)
Ensembl gene IDs: ENSG00000283434Ensembl transcript IDs: ENST00000635844.1, ENST00000636323.1, ENST00000636504.1, ENST00000636795.1, ENST00000637986.2, ENST00000638109.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGAGGCAACAGAGGAGGAGGAGGAGGTGGTGGAGGAGGAGGAAGTaGAGGAGGAGGTGGATGGGAGCAGGGATTGTGGCTGAGAATTAT | + |
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Preference number: 5 (lower is better) Translates to: QRQQRRRRRWWRRRK*RRRWMGAGIVAENY Trigger: ATAATTCTCAGCCACAATCCCTGCTCCCATCCACCTCCTCCTCCACTTCCTCCTCCTCCACCACCTCCTCCTCCTCCTCTGTTGCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CCA 90 bp | TTCGCTAATTGTAGTTGGAGTGGCAGCTCAGTTGGATTAGCACCCTaGGGCTCGCTGTCTTTAGTTTGCGGAGGAAGAAGTAGGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: FANCSWSGSSVGLAP*GSLSLVCGGRSRKP Trigger: CGGCTTCCTACTTCTTCCTCCGCAAACTAAAGACAGCGAGCCCCAGGGTGCTAATCCAACTGAGCTGCCACTCCAACTACAATTAGCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635844.1 ENST00000636323.1 |
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| CDS CCA 90 bp | ATGAGAGCCTTAATAGTCTACCCTCACTGCTGGAAAATGAGGGTGTaGAGTGTGAACAAGAGGCTCTGTTTCCGCTCCCATCCTGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: MRALIVYPHCWKMRV*SVNKRLCFRSHPEA Trigger: GGCCTCAGGATGGGAGCGGAAACAGAGCCTCTTGTTCACACTCCACACCCTCATTTTCCAGCAGTGAGGGTAGACTATTAAGGCTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636504.1 |
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| CDS CCA 90 bp | AGGTTTTCCATCTCTCCTTTCTTGTTCAGCTTCGCTAATTGTAGTTaGAGTGGCAGCTCAGTTGGATTAGCACCCTGGGGCTCGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: RFSISPFLFSFANCS*SGSSVGLAPWGSLS Trigger: AGACAGCGAGCCCCAGGGTGCTAATCCAACTGAGCTGCCACTCCAACTACAATTAGCGAAGCTGAACAAGAAAGGAGAGATGGAAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635844.1 ENST00000636323.1 |
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| CDS TCA 90 bp | TGCAGGCAACCGATGGTAGCTAAGTACCTTACGGAATACAGGACGTaGGAGAGTGAGGGTCATAAACTCTTTGGAAGGAGAGGAAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: CRQPMVAKYLTEYRT*ESEGHKLFGRRGRG Trigger: TCCTCTTCCTCTCCTTCCAAAGAGTTTATGACCCTCACTCTCTCACGTCCTGTATTCCGTAAGGTACTTAGCTACCATCGGTTGCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS GCA 90 bp | GCCTCGATCCTTGATGACATGAGAGCCTTAATAGTCTACCCTCACTaGTGGAAAATGAGGGTGTGGAGTGTGAACAAGAGGCTCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: ASILDDMRALIVYPH*WKMRVWSVNKRLCF Trigger: GAAACAGAGCCTCTTGTTCACACTCCACACCCTCATTTTCCAGCAGTGAGGGTAGACTATTAAGGCTCTCATGTCATCAAGGATCGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636504.1 |
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| CDS CCA 90 bp | TCGATCCTTGATGACATGAGAGCCTTAATAGTCTACCCTCACTGCTaGAAAATGAGGGTGTGGAGTGTGAACAAGAGGCTCTGTTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: SILDDMRALIVYPHC*KMRVWSVNKRLCFR Trigger: GCGGAAACAGAGCCTCTTGTTCACACTCCACACCCTCATTTTCCAGCAGTGAGGGTAGACTATTAAGGCTCTCATGTCATCAAGGATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636504.1 |
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| CDS GCA 90 bp | CAGCTGGTAATCTTTGCTATATATAAACTCAAGCCAGGAGACCCCTaGAGGCAACCGATGGTAGCTAAGTACCTTACGGAATACAGGACG | + |
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Preference number: 5 (lower is better) Translates to: QLVIFAIYKLKPGDP*RQPMVAKYLTEYRT Trigger: CGTCCTGTATTCCGTAAGGTACTTAGCTACCATCGGTTGCCTGCAGGGGTCTCCTGGCTTGAGTTTATATATAGCAAAGATTACCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CCA 90 bp | GAGATTTGGGAGAAGGCAATACTGAGCATCTCTGGACCTTCTTATTaGAGCCCAGTGGAGGTACTGCAAAGTGATTGCTATGGGATTGCA | + |
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Preference number: 5 (lower is better) Translates to: EIWEKAILSISGPSY*SPVEVLQSDCYGIA Trigger: TGCAATCCCATAGCAATCACTTTGCAGTACCTCCACTGGGCTCCAATAAGAAGGTCCAGAGATGCTCAGTATTGCCTTCTCCCAAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 90 bp | GGCCACAATGAACTTCTCCAGTGGAGGCCTATTGAAGGTGTGTTCTaGTGCTTGGCATGGAACAATGGTGAATTCAGAAACCTATCACAG | + |
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Preference number: 5 (lower is better) Translates to: GHNELLQWRPIEGVF*CLAWNNGEFRNLSQ Trigger: CTGTGATAGGTTTCTGAATTCACCATTGTTCCATGCCAAGCATCAGAACACACCTTCAATAGGCCTCCACTGGAGAAGTTCATTGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 90 bp | AGTTCTGTTGGCGACTCTGAGACAGGGACACAATATCTGGAGATCTaGACATCATCTCTGCCATTATGTTGCTTTGTACTCTTCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SSVGDSETGTQYLEI*TSSLPLCCFVLFSL Trigger: CAAGGAGAAGAGTACAAAGCAACATAATGGCAGAGATGATGTTCAGATCTCCAGATATTGTGTCCCTGTCTCAGAGTCGCCAACAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636504.1 ENST00000638109.1 |
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| CDS TCA 90 bp | GAAGCAGCTGTGTTCCTGGTGCAGTGTTTGGAGCTTGATAATAATTaGCCTGAGATGTTTGTTTTTGGATGGGGTGATGGTAGATGTGTG | + |
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Preference number: 5 (lower is better) Translates to: EAAVFLVQCLELDNN*PEMFVFGWGDGRCV Trigger: CACACATCTACCATCACCCCATCCAAAAACAAACATCTCAGGTCAATTATTATCAAGCTCCAAACACTGCACCAGGAACACAGCTGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS GCA 90 bp | ACTCTGAGACAGGGACACAATATCTGGAGATCTGAACATCATCTCTaGCATTATGTTGCTTTGTACTCTTCTCCTTGGGCCATTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: TLRQGHNIWRSEHHL*HYVALYSSPWAISP Trigger: TGGTGAAATGGCCCAAGGAGAAGAGTACAAAGCAACATAATGGCAGAGATGATGTTCAGATCTCCAGATATTGTGTCCCTGTCTCAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636504.1 ENST00000638109.1 |
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| CDS CCA 90 bp | ATGAACTTCTCCAGTGGAGGCCTATTGAAGGTGTGTTCTGATGCTTaGCATGGAACAATGGTGAATTCAGAAACCTATCACAGAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: MNFSSGGLLKVCSDA*HGTMVNSETYHRSS Trigger: AGAGCTTCTGTGATAGGTTTCTGAATTCACCATTGTTCCATGCCAAGCATCAGAACACACCTTCAATAGGCCTCCACTGGAGAAGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS GCA 90 bp | AATGGTAAATTCTCAGATGGGTGGACAAAATATGATGATGCTGATTaGCTTGCTTTTGAATGGGACACTGGTAAGCCTCCAATAGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: NGKFSDGWTKYDDAD*LAFEWDTGKPPIVG Trigger: CCCCACTATTGGAGGCTTACCAGTGTCCCATTCAAAAGCAAGGCAATCAGCATCATCATATTTTGTCCACCCATCTGAGAATTTACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 90 bp | GGTGAATTCAGAAACCTATCACAGAAGCTCTGTGAAATTTTGTCCTaGGATTTGGGAGAAGGCAATACTGAGCATCTCTGGACCTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: GEFRNLSQKLCEILS*DLGEGNTEHLWTFL Trigger: TAAGAAGGTCCAGAGATGCTCAGTATTGCCTTCTCCCAAATCTCAGGACAAAATTTCACAGAGCTTCTGTGATAGGTTTCTGAATTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 90 bp | ATTGACCTGAGATGTTTGTTTTTGGATGGGGTGATGGTAGATGTGTaGCTCTGTGTTTGCCATTTGGTGAAGTGGTATTCTGAAACTTGG | + |
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Preference number: 5 (lower is better) Translates to: IDLRCLFLDGVMVDV*LCVCHLVKWYSETW Trigger: CCAAGTTTCAGAATACCACTTCACCAAATGGCAAACACAGAGTCACACATCTACCATCACCCCATCCAAAAACAAACATCTCAGGTCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 90 bp | AAGCAATGTCGAGCTAAGGGCTTTTCGTTTGGGTCCCAAGGAAGATaGTGTCCAAATGATGTTTATGGAAGGTATTTCTTGATTTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: KQCRAKGFSFGSQGR*CPNDVYGRYFLILE Trigger: CTCCAAAATCAAGAAATACCTTCCATAAACATCATTTGGACATCATCTTCCTTGGGACCCAAACGAAAAGCCCTTAGCTCGACATTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 90 bp | TCAGAATTGGCCTCAGGTGTTGGTATGACAGAAAGTGTTGCACAATaGGGATTTTTCTTTCCTCTAAGATGGTTACATGGAGATTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: SELASGVGMTESVAQ*GFFFPLRWLHGDFR Trigger: CCTAAAATCTCCATGTAACCATCTTAGAGGAAAGAAAAATCCTCATTGTGCAACACTTTCTGTCATACCAACACCTGAGGCCAATTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS GCA 90 bp | TCTGCATCTTTCTTATTCAAATCTTTAACACTGGGCCCAATGCCCTaGTTCCAACCAGCTATGGGTTTGTTTTTGTCCAGAAATATTTTC | + |
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Preference number: 5 (lower is better) Translates to: SASFLFKSLTLGPMP*FQPAMGLFLSRNIF Trigger: GAAAATATTTCTGGACAAAAACAAACCCATAGCTGGTTGGAAGCAGGGCATTGGGCCCAGTGTTAAAGATTTGAATAAGAAAGATGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636795.1 |
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| CDS CCA 72 bp | TGTAGTTGGAGTGGCAGCTCAGTTGGATTAGCACCCTaGGGCTCGCTGTCTTTAGTTTGCGGAGGAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: CSWSGSSVGLAP*GSLSLVCGGRS Trigger: ACTTCTTCCTCCGCAAACTAAAGACAGCGAGCCCCAGGGTGCTAATCCAACTGAGCTGCCACTCCAACTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635844.1 ENST00000636323.1 |
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| CDS CCA 72 bp | ATCTCTCCTTTCTTGTTCAGCTTCGCTAATTGTAGTTaGAGTGGCAGCTCAGTTGGATTAGCACCCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ISPFLFSFANCS*SGSSVGLAPWG Trigger: GCCCCAGGGTGCTAATCCAACTGAGCTGCCACTCCAACTACAATTAGCGAAGCTGAACAAGAAAGGAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635844.1 ENST00000636323.1 |
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| CDS GCA 72 bp | TCTCTGGACCTTCTTATTGGAGCCCAGTGGAGGTACTaGAAAGTGATTGCTATGGGATTGCACTTTGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SLDLLIGAQWRY*KVIAMGLHFGH Trigger: ATGGCCAAAGTGCAATCCCATAGCAATCACTTTGCAGTACCTCCACTGGGCTCCAATAAGAAGGTCCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CCA 72 bp | TTAATAGTCTACCCTCACTGCTGGAAAATGAGGGTGTaGAGTGTGAACAAGAGGCTCTGTTTCCGCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LIVYPHCWKMRV*SVNKRLCFRSH Trigger: ATGGGAGCGGAAACAGAGCCTCTTGTTCACACTCCACACCCTCATTTTCCAGCAGTGAGGGTAGACTATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636504.1 |
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| CDS CCA 72 bp | GATGACATGAGAGCCTTAATAGTCTACCCTCACTGCTaGAAAATGAGGGTGTGGAGTGTGAACAAGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: DDMRALIVYPHC*KMRVWSVNKRL Trigger: GAGCCTCTTGTTCACACTCCACACCCTCATTTTCCAGCAGTGAGGGTAGACTATTAAGGCTCTCATGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636504.1 |
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| CDS CAA 72 bp | GCCTCATTTAGGGGCAGGTTTTCCATCTCTCCTTTCTaGTTCAGCTTCGCTAATTGTAGTTGGAGTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASFRGRFSISPF*FSFANCSWSGS Trigger: GCTGCCACTCCAACTACAATTAGCGAAGCTGAACAAGAAAGGAGAGATGGAAAACCTGCCCCTAAATGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636323.1 |
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| CDS CAA 90 bp | ATGGAGATTTTAGGCAGGAAGCACAAGCTAAGCAAACCACATAATTaGATGACAAGCGAGGACCAGGATGAGGATTTGGCCTTCCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: MEILGRKHKLSKPHN*MTSEDQDEDLAFPS Trigger: TGAGGGGAAGGCCAAATCCTCATCCTGGTCCTCGCTTGTCATCAAATTATGTGGTTTGCTTAGCTTGTGCTTCCTGCCTAAAATCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | AAGAAGCTGCTAAGGAGGCCACCACACTCTAGCTGCTaGAATGTCCTTCTCATCCCTATAGCTGTAGTGATT | + |
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Preference number: 6 (lower is better) Translates to: KKLLRRPPHSSC*NVLLIPIAVVI Trigger: AATCACTACAGCTATAGGGATGAGAAGGACATTTCAGCAGCTAGAGTGTGGTGGCCTCCTTAGCAGCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636795.1 |
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| CDS TCA 72 bp | CCGATGGTAGCTAAGTACCTTACGGAATACAGGACGTaGGAGAGTGAGGGTCATAAACTCTTTGGAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PMVAKYLTEYRT*ESEGHKLFGRR Trigger: TCTCCTTCCAAAGAGTTTATGACCCTCACTCTCTCACGTCCTGTATTCCGTAAGGTACTTAGCTACCATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS GCA 72 bp | CTTGATGACATGAGAGCCTTAATAGTCTACCCTCACTaGTGGAAAATGAGGGTGTGGAGTGTGAACAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LDDMRALIVYPH*WKMRVWSVNKR Trigger: CCTCTTGTTCACACTCCACACCCTCATTTTCCAGCAGTGAGGGTAGACTATTAAGGCTCTCATGTCATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636504.1 |
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| CDS CCA 72 bp | GCTACCGCCCACCATATTTGCTTCATATTAAGTCCCTaGATATCCCGTTCAGATGTGGGGAAAAACTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ATAHHICFILSP*ISRSDVGKNCC Trigger: ACAGCAGTTTTTCCCCACATCTGAACGGGATATCCAGGGACTTAATATGAAGCAAATATGGTGGGCGGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CAA 72 bp | ACCTCATTTAGGGGCAGGTTTTCCATCTCTCCTTTCTaGTTCAGCTTCGCTAATTGTAGTTGGAGTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TSFRGRFSISPF*FSFANCSWSGS Trigger: GCTGCCACTCCAACTACAATTAGCGAAGCTGAACAAGAAAGGAGAGATGGAAAACCTGCCCCTAAATGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635844.1 |
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| CDS CAA 72 bp | TTAGGCAGGAAGCACAAGCTAAGCAAACCACATAATTaGATGACAAGCGAGGACCAGGATGAGGATTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGRKHKLSKPHN*MTSEDQDEDLA Trigger: GGCCAAATCCTCATCCTGGTCCTCGCTTGTCATCAAATTATGTGGTTTGCTTAGCTTGTGCTTCCTGCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | CTGTGTGCCTGCCATATTTCACCACACTCTAGCTGCTaGAATGTCCTTCTCATCCCTATAGCTGTAGTGATT | + |
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Preference number: 6 (lower is better) Translates to: LCACHISPHSSC*NVLLIPIAVVI Trigger: AATCACTACAGCTATAGGGATGAGAAGGACATTTCAGCAGCTAGAGTGTGGTGAAATATGGCAGGCACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635844.1 ENST00000636323.1 |
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| CDS TCA 72 bp | TCTTCTCCTTGGGCCATTTCACCACACTCTAGCTGCTaGAATGTCCTTCTCATCCCTATAGCTGTAGTGATT | + |
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Preference number: 6 (lower is better) Translates to: SSPWAISPHSSC*NVLLIPIAVVI Trigger: AATCACTACAGCTATAGGGATGAGAAGGACATTTCAGCAGCTAGAGTGTGGTGAAATGGCCCAAGGAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636504.1 ENST00000638109.1 |
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| CDS TCA 72 bp | GGCGACTCTGAGACAGGGACACAATATCTGGAGATCTaGACATCATCTCTGCCATTATGTTGCTTTGTACTC | + |
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Preference number: 6 (lower is better) Translates to: GDSETGTQYLEI*TSSLPLCCFVL Trigger: GAGTACAAAGCAACATAATGGCAGAGATGATGTTCAGATCTCCAGATATTGTGTCCCTGTCTCAGAGTCGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636504.1 ENST00000638109.1 |
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| CDS GCA 72 bp | CAGGGACACAATATCTGGAGATCTGAACATCATCTCTaGCATTATGTTGCTTTGTACTCTTCTCCTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QGHNIWRSEHHL*HYVALYSSPWA Trigger: GGCCCAAGGAGAAGAGTACAAAGCAACATAATGGCAGAGATGATGTTCAGATCTCCAGATATTGTGTCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636504.1 ENST00000638109.1 |
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| CDS GCA 72 bp | ATCTTTGCTATATATAAACTCAAGCCAGGAGACCCCTaGAGGCAACCGATGGTAGCTAAGTACCTTACGGAA | + |
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Preference number: 6 (lower is better) Translates to: IFAIYKLKPGDP*RQPMVAKYLTE Trigger: TTCCGTAAGGTACTTAGCTACCATCGGTTGCCTGCAGGGGTCTCCTGGCTTGAGTTTATATATAGCAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CCA 72 bp | GTTCTGTTGGCGACTCTGAGACAGGGACACAATATCTaGAGATCTGAACATCATCTCTGCCATTATGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VLLATLRQGHNI*RSEHHLCHYVA Trigger: AGCAACATAATGGCAGAGATGATGTTCAGATCTCCAGATATTGTGTCCCTGTCTCAGAGTCGCCAACAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636504.1 ENST00000638109.1 |
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| CDS CAA 90 bp | GTAAATAATGCCTCATTTAGGGGCAGGTTTTCCATCTCTCCTTTCTaGTTCAGCTTCGCTAATTGTAGTTGGAGTGGCAGCTCAGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: VNNASFRGRFSISPF*FSFANCSWSGSSVG Trigger: TCCAACTGAGCTGCCACTCCAACTACAATTAGCGAAGCTGAACAAGAAAGGAGAGATGGAAAACCTGCCCCTAAATGAGGCATTATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636323.1 |
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| CDS GCA 72 bp | ATAACTTTGTTTTCGGGGGCTACCGCCCACCATATTTaGTTCATATTAAGTCCCTGGATATCCCGTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ITLFSGATAHHI*FILSPWISRSD Trigger: ATCTGAACGGGATATCCAGGGACTTAATATGAAGCAAATATGGTGGGCGGTAGCCCCCGAAAACAAAGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CCA 72 bp | ACTCCTTCAAGGTTGTCTTCAGGGACTTCATTAGGCTaGTTTTCTTTCATAGGGAATGGGAGACAAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: TPSRLSSGTSLG*FSFIGNGRQDE Trigger: CTCATCTTGTCTCCCATTCCCTATGAAAGAAAACCAGCCTAATGAAGTCCCTGAAGACAACCTTGAAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CAA 72 bp | TGGAGATCTGAACATCATCTCTGCCATTATGTTGCTTaGTACTCTTCTCCTTGGGCCATTTCACCACACTCT | + |
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Preference number: 6 (lower is better) Translates to: WRSEHHLCHYVA*YSSPWAISPHS Trigger: AGAGTGTGGTGAAATGGCCCAAGGAGAAGAGTACAAAGCAACATAATGGCAGAGATGATGTTCAGATCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000636504.1 ENST00000638109.1 |
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| CDS CAA 72 bp | GCCCAGTGGAGGTACTGCAAAGTGATTGCTATGGGATaGCACTTTGGCCATAGGTTGGTTATTGAATTGATT | + |
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Preference number: 6 (lower is better) Translates to: AQWRYCKVIAMG*HFGHRLVIELI Trigger: AATCAATTCAATAACCAACCTATGGCCAAAGTGCAATCCCATAGCAATCACTTTGCAGTACCTCCACTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CAA 72 bp | TATAACTTTGTTTTCGGGGGCTACCGCCCACCATATTaGCTTCATATTAAGTCCCTGGATATCCCGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: YNFVFGGYRPPY*LHIKSLDIPFR Trigger: TCTGAACGGGATATCCAGGGACTTAATATGAAGCAAATATGGTGGGCGGTAGCCCCCGAAAACAAAGTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | AGAAACCTATCACAGAAGCTCTGTGAAATTTTGTCCTaGGATTTGGGAGAAGGCAATACTGAGCATCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RNLSQKLCEILS*DLGEGNTEHLW Trigger: CCAGAGATGCTCAGTATTGCCTTCTCCCAAATCTCAGGACAAAATTTCACAGAGCTTCTGTGATAGGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | CGAGCTAAGGGCTTTTCGTTTGGGTCCCAAGGAAGATaGTGTCCAAATGATGTTTATGGAAGGTATTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RAKGFSFGSQGR*CPNDVYGRYFL Trigger: CAAGAAATACCTTCCATAAACATCATTTGGACATCATCTTCCTTGGGACCCAAACGAAAAGCCCTTAGCTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS GCA 72 bp | TTCTTATTCAAATCTTTAACACTGGGCCCAATGCCCTaGTTCCAACCAGCTATGGGTTTGTTTTTGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: FLFKSLTLGPMP*FQPAMGLFLSR Trigger: TCTGGACAAAAACAAACCCATAGCTGGTTGGAAGCAGGGCATTGGGCCCAGTGTTAAAGATTTGAATAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636795.1 |
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| CDS CCA 72 bp | TATCACAGAAGCTCTGTGAAATTTTGTCCTGAGATTTaGGAGAAGGCAATACTGAGCATCTCTGGACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: YHRSSVKFCPEI*EKAILSISGPS Trigger: AGAAGGTCCAGAGATGCTCAGTATTGCCTTCTCCCAAATCTCAGGACAAAATTTCACAGAGCTTCTGTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | GATCTCCAGCAAACATCTAGGCTTGAAGATGTTGTTTaGGGTTTACAGAAGGGTAATTGTAAACTCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: DLQQTSRLEDVV*GLQKGNCKLRA Trigger: AGCCCTGAGTTTACAATTACCCTTCTGTAAACCTCAAACAACATCTTCAAGCCTAGATGTTTGCTGGAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | CCAATAGTGGGGTTAGAGTTCAATATAGGTGTTTTCTaGAGCCTAGAGTCAAGTAATGGAGAGGTAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PIVGLEFNIGVF*SLESSNGEVRA Trigger: TGCTCTTACCTCTCCATTACTTGACTCTAGGCTTCAGAAAACACCTATATTGAACTCTAACCCCACTATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | AGATGTTTGTTTTTGGATGGGGTGATGGTAGATGTGTaGCTCTGTGTTTGCCATTTGGTGAAGTGGTATTCT | + |
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Preference number: 6 (lower is better) Translates to: RCLFLDGVMVDV*LCVCHLVKWYS Trigger: AGAATACCACTTCACCAAATGGCAAACACAGAGTCACACATCTACCATCACCCCATCCAAAAACAAACATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | CTATTTTGCCCTCAGAATTGGCCTCAGGTGTTGGTATaGCAGAAAGTGTTGCACAATGAGGATTTTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LFCPQNWPQVLV*QKVLHNEDFSF Trigger: GAAAGAAAAATCCTCATTGTGCAACACTTTCTGTCATACCAACACCTGAGGCCAATTCTGAGGGCAAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CAA 90 bp | ACTTCAATGAAAGTGATCTCCAGCAAACATCTAGGCTTGAAGATGTaGTTTGAGGTTTACAGAAGGGTAATTGTAAACTCAGGGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: TSMKVISSKHLGLKM*FEVYRRVIVNSGLL Trigger: AAGCAGCCCTGAGTTTACAATTACCCTTCTGTAAACCTCAAACAACATCTTCAAGCCTAGATGTTTGCTGGAGATCACTTTCATTGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CCA 72 bp | CTAATGTTGAAGCAGCTGTGTTCCTGGTGCAGTGTTTaGAGCTTGATAATAATTGACCTGAGATGTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LMLKQLCSWCSV*SLIIIDLRCLF Trigger: AAACAAACATCTCAGGTCAATTATTATCAAGCTCCAAACACTGCACCAGGAACACAGCTGCTTCAACATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | AGCCTAGAGTCAAGTAATGGAGAGGTAAGAGCAATTTaGTTGGGTTTGAAAGAAGGTGATGTCCAAAATAAG | + |
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Preference number: 6 (lower is better) Translates to: SLESSNGEVRAI*LGLKEGDVQNK Trigger: CTTATTTTGGACATCACCTTCTTTCAAACCCAATCAAATTGCTCTTACCTCTCCATTACTTGACTCTAGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CAA 90 bp | AATTTGAACAGTGTGTTTGCTCCCTTTCTCCATTTTACTGTATTGTaGTTCCTCACAGGCTTTGTTTTAAGAGATGATGATTGGCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: NLNSVFAPFLHFTVL*FLTGFVLRDDDWLR Trigger: TCGAAGCCAATCATCATCTCTTAAAACAAAGCCTGTGAGGAACAACAATACAGTAAAATGGAGAAAGGGAGCAAACACACTGTTCAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | TCATCAGGGACAGTTCCACCTTTAACAATGCAGGGCTaGCTATACTTTAAAGTCCAAGGAATTTCTTTATTT | + |
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Preference number: 6 (lower is better) Translates to: SSGTVPPLTMQG*LYFKVQGISLF Trigger: AAATAAAGAAATTCCTTGGACTTTAAAGTATAGTCAGCCCTGCATTGTTAAAGGTGGAACTGTCCCTGATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CCA 72 bp | TTAGTTTTTCACCTGTATGTTGATGTGTTAATGTATTaGCTGAGGACAGTTGGTAGAAGTAGTCTAATGGCA | + |
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Preference number: 6 (lower is better) Translates to: LVFHLYVDVLMY*LRTVGRSSLMA Trigger: TGCCATTAGACTACTTCTACCAACTGTCCTCAGCCAATACATTAACACATCAACATACAGGTGAAAAACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CAA 72 bp | AGTGTGTTTGCTCCCTTTCTCCATTTTACTGTATTGTaGTTCCTCACAGGCTTTGTTTTAAGAGATGATGAT | + |
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Preference number: 6 (lower is better) Translates to: SVFAPFLHFTVL*FLTGFVLRDDD Trigger: ATCATCATCTCTTAAAACAAAGCCTGTGAGGAACAACAATACAGTAAAATGGAGAAAGGGAGCAAACACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CAA 90 bp | TTATGGAAGGTATTTCTTGATTTTGGAGGCGAAATAATGATGAACTaGAGACTCTTTGATGAGACTTCAATGAAAGTGATCTCCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LWKVFLDFGGEIMMN*RLFDETSMKVISSK Trigger: TTTGCTGGAGATCACTTTCATTGAAGTCTCATCAAAGAGTCTCAAGTTCATCATTATTTCGCCTCCAAAATCAAGAAATACCTTCCATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS TCA 72 bp | GATGATGTCCAAATGATGTTTATGGAAGGTATTTCTTaGTTTTGGAGGCGAAATAATGATGAACTTGAGACT | + |
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Preference number: 6 (lower is better) Translates to: DDVQMMFMEGIS*FWRRNNDELET Trigger: AGTCTCAAGTTCATCATTATTTCGCCTCCAAAATCAAGAAATACCTTCCATAAACATCATTTGGACATCATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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| CDS CAA 72 bp | GTATTTCTTGATTTTGGAGGCGAAATAATGATGAACTaGAGACTCTTTGATGAGACTTCAATGAAAGTGATC | + |
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Preference number: 6 (lower is better) Translates to: VFLDFGGEIMMN*RLFDETSMKVI Trigger: GATCACTTTCATTGAAGTCTCATCAAAGAGTCTCAAGTTCATCATTATTTCGCCTCCAAAATCAAGAAATAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637986.2 |
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