RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSNK2B (Homo sapiens)

Ensembl gene IDs: ENSG00000204435, ENSG00000206406, ENSG00000228875, ENSG00000232960

Ensembl transcript IDs: ENST00000375865.6, ENST00000375866.2, ENST00000375882.7, ENST00000375885.8, ENST00000383427.6, ENST00000383431.6, ENST00000383433.8, ENST00000400110.5, ENST00000400116.7, ENST00000412802.5, ENST00000413083.5, ENST00000416194.5, ENST00000418230.5, ENST00000422261.6, ENST00000422567.6, ENST00000424502.6, ENST00000428483.6, ENST00000429633.5, ENST00000431476.5, ENST00000432290.6, ENST00000436169.5, ENST00000437010.5, ENST00000439572.6, ENST00000443673.6, ENST00000448596.1, ENST00000451917.6, ENST00000452985.6, ENST00000453234.5, ENST00000454382.6, ENST00000454511.5, ENST00000455161.1, ENST00000458330.5, ENST00000460765.5, ENST00000461323.5, ENST00000464220.1, ENST00000464582.5, ENST00000465367.5, ENST00000465481.6, ENST00000465631.5, ENST00000468132.1, ENST00000468255.5, ENST00000469352.5, ENST00000471828.5, ENST00000475875.2, ENST00000476022.1, ENST00000476055.5, ENST00000476407.5, ENST00000476584.5, ENST00000480866.1, ENST00000481269.1, ENST00000481308.5, ENST00000485003.1, ENST00000485658.5, ENST00000486289.5, ENST00000488020.1, ENST00000489925.5, ENST00000490307.5, ENST00000492499.5, ENST00000493079.5, ENST00000497836.5, ENST00000550832.2, ENST00000611721.4, ENST00000612713.3, ENST00000613998.1, ENST00000614783.4, ENST00000614974.4, ENST00000615589.2, ENST00000615772.4, ENST00000617578.4, ENST00000619468.4, ENST00000620798.3, ENST00000621203.1, ENST00000621623.4, ENST00000621953.2, ENST00000622139.3, ENST00000677388.1, ENST00000677536.1, ENST00000677758.1

Found 612 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGACTGCAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTaGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAGGC +
Preference number: 1 (lower is better)
Translates to: RLQDRWGRESANRLD*ALEVAGGLELQLVG
Trigger: GCCTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTGCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR TCA 90 bp GGGCCTGTCATGGGGCTCCGGCAGAGAGCTCTGGAGTTGGGGGCTTaGCCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATA +
Preference number: 1 (lower is better)
Translates to: GPVMGLRQRALELGA*PGVAIIVLTALGLI
Trigger: TATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGAGCCCCATGACAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR TCA 90 bp CAAACTGGTTGGCAGGTCTCTTGGGCCGGTACTCGGGATGCACCATaGAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCG +
Preference number: 1 (lower is better)
Translates to: QTGWQVSWAGTRDAP*RACEGNQCRSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCAGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR CCA 90 bp CAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGTCTTGATGACTTaGGTGTGTACACATCCATGCACTTGGGGCAGTAGAGCTTCACCA +
Preference number: 1 (lower is better)
Translates to: QCRSRRHPCDGVLMT*VCTHPCTWGSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGTACACACCCAAGTCATCAAGACACCATCACACGGATGGCGCCTACTTCGGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
3UTR CCA 90 bp TGGGTGTGTACACATCCATGCACTTGGGGCAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTGAAAGGCCAATGGGAAGCATTGGCT +
Preference number: 1 (lower is better)
Translates to: WVCTHPCTWGSRASP*LHLGCLKGQWEALA
Trigger: AGCCAATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGTACACACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
3UTR GCA 90 bp CATCCGTGTGATGGTGTCTTGATGACTTGGGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCTTCACCATGGCTTCACCTGGGATGT +
Preference number: 1 (lower is better)
Translates to: HPCDGVLMTWVCTHP*TWGSRASPWLHLGC
Trigger: ACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGTACACACCCAAGTCATCAAGACACCATCACACGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
3UTR GCA 90 bp ACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTaGGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTC +
Preference number: 1 (lower is better)
Translates to: TDSTGPDTSTLQSRC*VFLGSGRKCTVHSL
Trigger: GAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR GCA 90 bp CAGAGAGGGCAGTGCAGGATGCTGAGGGTGTTACAGAAAGATATTTaGACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCT +
Preference number: 1 (lower is better)
Translates to: QRGQCRMLRVLQKDI*TVEFRKGEVSRVQP
Trigger: AGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAGCATCCTGCACTGCCCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR TCA 90 bp GAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAA +
Preference number: 1 (lower is better)
Translates to: EGVTERYLHCGIQEG*GVKSPAWGRTKSPE
Trigger: TTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR GCA 90 bp GTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTaGAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTA +
Preference number: 1 (lower is better)
Translates to: VAIIVLTALGLIPVL*KVGVAFFLAAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR TCA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTGGA +
Preference number: 2 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRSYSGG*GRRIAG
Trigger: TCCAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR CCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAGGCTCCGTCCCAGCATaGAAATTGGGGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSGSVPA*KLGRGR
Trigger: CCTGCCCCTCCCCAATTTCCATGCTGGGACGGAGCC...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CCA 90 bp GGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 2 (lower is better)
Translates to: GGGNQRIVLTGLLKLLAAGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...AGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR GCA 90 bp CAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 2 (lower is better)
Translates to: QRIVLTGLLKLLAAWSCSCEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...GCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR CCA 90 bp CAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCAGCCTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: QRIVLTGLLKLLAAWSCSSLGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCT...GCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR CCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR TCA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 2 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR CCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: MDKTGETELDVNRQVTGLARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR CCA 90 bp CAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTTGGGCACAAACTGGTTaGCAGGTCTCTTGGGCCGGT +
Preference number: 2 (lower is better)
Translates to: QDRWGRESANRLDWALEVWAQTG*QVSWAG
Trigger: ACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCA...AACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR TCA 90 bp GGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGACTCGGGATGCACCATaGAGAGCATGTGAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: GRESANRLDWALEVAGGLTRDAP*RACEGN
Trigger: GTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGT...CAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR CCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CCA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGGCTGCTAGTTCAGTCTaGTACTGGGTCTTAGAGACA +
Preference number: 2 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRAASSV*YWVLET
Trigger: TGTCTCTAAGACCCAGTACCAGACTGAACTAGCAGC...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR CAA 90 bp GAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTaGGAGCTGCAGCTGGTAGGCCATCGGATGGATCTTGAAACCGTA +
Preference number: 2 (lower is better)
Translates to: ESANRLDWALEVAGG*ELQLVGHRMDLETV
Trigger: TACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR GCA 90 bp GGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 2 (lower is better)
Translates to: GRESANRLDWALEVAGGLVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...CAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTCCGGCAGAGAGCTCTaGAGTTGGGGGCTTGACCAG +
Preference number: 2 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYSGREL*SWGLDQ
Trigger: CTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGA...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGGGCTCCGTCCCAGCATaGAAATTGGGGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LRDMDKTGETELDVNRQVGSVPA*KLGRGR
Trigger: CCTGCCCCTCCCCAATTTCCATGCTGGGACGGAGCC...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR CCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGGGCTCCGTCCCAGCATaGAAATTGGGGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: KIFALWNSGRVRCQESSLGSVPA*KLGRGR
Trigger: CCTGCCCCTCCCCAATTTCCATGCTGGGACGGAGCC...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CCA 90 bp CTCGGGATGCACCATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 2 (lower is better)
Translates to: LGMHHEEHVRETSAEVGAGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...GGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR CCA 90 bp GGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 2 (lower is better)
Translates to: GRESANRLDWALEVAGGLGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...CAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR CCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGAGAGAGCTCTGGAGTTaGGGGCTTGACCAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRRELWS*GLDQEL
Trigger: CAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCT...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGGTCAAGAGTCCAGCCTaGGGAAGAACCAAAAGTCCT +
Preference number: 2 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKVKSPA*GRTKSP
Trigger: AGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR CCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGGTAATCCCGGCACTTTaGGAGGTCGAGGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: MDKTGETELDVNRQVTGLVIPAL*EVEEGR
Trigger: TCTGCCCTCCTCGACCTCCCAAAGTGCCGGGATTAC...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR CCA 90 bp GACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 2 (lower is better)
Translates to: DRWGRESANRLDWALEVAMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...AGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677388.1
3UTR-3UTR CCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGAGAGAGCTCTGGAGTTaGGGGCTTGACCAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: MDKTGETELDVNRQVTGLRELWS*GLDQEL
Trigger: CAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCT...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR CAA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAA +
Preference number: 2 (lower is better)
Translates to: LGLIPVLCKVGVAFF*AAVGNVLSTASNDE
Trigger: TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGAGAGAGCTCTGGAGTTaGGGGCTTGACCAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQRELWS*GLDQEL
Trigger: CAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCT...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACAGAGAGCTCTGGAGTTaGGGGCTTGACCAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYRELWS*GLDQEL
Trigger: CAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCT...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGAGGGATGGGGGATACTaGAACACTCAGATGATGGGG +
Preference number: 2 (lower is better)
Translates to: MDKTGETELDVNRQVTGLRDGGY*NTQMMG
Trigger: CCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCT...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR TCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCTGGAGTTGGGGGCTTaGCCAGGAGTTGCAATAATC +
Preference number: 2 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQLELGA*PGVAII
Trigger: GATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAG...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR TCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 2 (lower is better)
Translates to: MDKTGETELDVNRQVTGLGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR GCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGCTGATACCAGTACTCTaGAAAGTAGGTGTTGCGTTT +
Preference number: 2 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKLIPVL*KVGVAF
Trigger: AAACGCAACACCTACTTTGCAGAGTACTGGTATCAG...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR GCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGCTGATACCAGTACTCTaGAAAGTAGGTGTTGCGTTT +
Preference number: 2 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRLIPVL*KVGVAF
Trigger: AAACGCAACACCTACTTTGCAGAGTACTGGTATCAG...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR TCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGAAAGTCCTGAACTATTaGGGAACAAGTACATGCGGC +
Preference number: 2 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQKVLNY*GTSTCG
Trigger: GCCGCATGTACTTGTTCCTCAATAGTTCAGGACTTT...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR GCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGCTGATACCAGTACTCTaGAAAGTAGGTGTTGCGTTT +
Preference number: 2 (lower is better)
Translates to: MDKTGETELDVNRQVTGLLIPVL*KVGVAF
Trigger: AAACGCAACACCTACTTTGCAGAGTACTGGTATCAG...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR GCA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGCTGATACCAGTACTCTaGAAAGTAGGTGTTGCGTTT +
Preference number: 2 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVLIPVL*KVGVAF
Trigger: AAACGCAACACCTACTTTGCAGAGTACTGGTATCAG...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGTGTAATCCCGGCACTTaGGGAGGTCGAGGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRCNPGT*GGRGGQ
Trigger: CTGCCCTCCTCGACCTCCCAAAGTGCCGGGATTACA...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR CCA 72 bp GACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTaGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: DRWGRESANRLD*ALEVAGGLELQ
Trigger: CTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR TCA 72 bp TGGCAGGTCTCTTGGGCCGGTACTCGGGATGCACCATaGAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGG +
Preference number: 3 (lower is better)
Translates to: WQVSWAGTRDAP*RACEGNQCRSR
Trigger: CCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGTACCGGCCCAAGAGACCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR TCA 72 bp ATGGGGCTCCGGCAGAGAGCTCTGGAGTTGGGGGCTTaGCCAGGAGTTGCAATAATCGTACTGACAGCACTG +
Preference number: 3 (lower is better)
Translates to: MGLRQRALELGA*PGVAIIVLTAL
Trigger: CAGTGCTGTCAGTACGATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGAGCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR TCA 72 bp CTTGGAGCTGCAGCTGGTAGGCCATCGGATGGATCTTaGAACCGTAGAGCCTGGGCACAAACTGGTTGGCAG +
Preference number: 3 (lower is better)
Translates to: LGAAAGRPSDGS*NRRAWAQTGWQ
Trigger: CTGCCAACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAGCTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR CAA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCATCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 3 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGTGTAATCCCGGCACTTaGGGAGGTCGAGGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: LRDMDKTGETELDVNRQVCNPGT*GGRGGQ
Trigger: CTGCCCTCCTCGACCTCCCAAAGTGCCGGGATTACA...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR CCA 72 bp ACACATCCATGCACTTGGGGCAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTGAAAGGCCAATGGGAA +
Preference number: 3 (lower is better)
Translates to: THPCTWGSRASP*LHLGCLKGQWE
Trigger: TTCCCATTGGCCTTTCAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
3UTR CCA 72 bp GTCTTGATGACTTGGGTGTGTACACATCCATGCACTTaGGGCAGTAGAGCTTCACCATGGCTTCACCTGGGA +
Preference number: 3 (lower is better)
Translates to: VLMTWVCTHPCT*GSRASPWLHLG
Trigger: TCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGTACACACCCAAGTCATCAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677388.1
3UTR CCA 72 bp AGTAGGCGCCATCCGTGTGATGGTGTCTTGATGACTTaGGTGTGTACACATCCATGCACTTGGGGCAGTAGA +
Preference number: 3 (lower is better)
Translates to: SRRHPCDGVLMT*VCTHPCTWGSR
Trigger: TCTACTGCCCCAAGTGCATGGATGTGTACACACCCAAGTCATCAAGACACCATCACACGGATGGCGCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
3UTR-3UTR CAA 90 bp GCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAACAT +
Preference number: 3 (lower is better)
Translates to: ANRLDWALEVAGGLELQLVTKVS*LVLFQH
Trigger: ATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTAC...CAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
3UTR GCA 72 bp GATGGTGTCTTGATGACTTGGGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCTTCACCATGGCTTCAC +
Preference number: 3 (lower is better)
Translates to: DGVLMTWVCTHP*TWGSRASPWLH
Trigger: GTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGTACACACCCAAGTCATCAAGACACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
3UTR CCA 72 bp CTCCTCGTCCTTCTTGCTGCTAGTTCAGTCTGGTACTaGGTCTTAGAGACATGGACAAGACAGGGGAAACAG +
Preference number: 3 (lower is better)
Translates to: LLVLLAASSVWY*VLETWTRQGKQ
Trigger: CTGTTTCCCCTGTCTTGTCCATGTCTCTAAGACCCAGTACCAGACTGAACTAGCAGCAAGAAGGACGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR CAA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 3 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 3 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR GCA 72 bp ATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTaGAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTA +
Preference number: 3 (lower is better)
Translates to: IVLTALGLIPVL*KVGVAFFLAAV
Trigger: TACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 3 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 3 (lower is better)
Translates to: MDKTGETELDVNRQVTGLSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR GCA 72 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTaGGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTC +
Preference number: 3 (lower is better)
Translates to: TGPDTSTLQSRC*VFLGSGRKCTV
Trigger: GACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 3 (lower is better)
Translates to: MDKTGETELDVNRQVTGLGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR-3UTR CAA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 3 (lower is better)
Translates to: KIFALWNSGRVRCQESSLGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 3 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 3 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 3 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR TCA 72 bp ACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAA +
Preference number: 3 (lower is better)
Translates to: TERYLHCGIQEG*GVKSPAWGRTK
Trigger: TTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGAAAAGTCCTGAACTATaGAGGAACAAGTACATGCGG +
Preference number: 3 (lower is better)
Translates to: KIFALWNSGRVRCQESSLKSPEL*RNKYMR
Trigger: CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTT...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGAAAAGTCCTGAACTATaGAGGAACAAGTACATGCGG +
Preference number: 3 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQKSPEL*RNKYMR
Trigger: CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTT...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
3UTR-3UTR CAA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGAAAAGTCCTGAACTATaGAGGAACAAGTACATGCGG +
Preference number: 3 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVKSPEL*RNKYMR
Trigger: CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTT...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCCTGGGCACAAACTGGTTGGCAGGTCTCTTGGGCCGGTACTCGGGATGCACCAGAGCGGGGGCCACGTTaGGGAAGGCGAAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: AWAQTGWQVSWAGTRDAPERGPR*GRRRAL
Trigger: CAATGCCCTTCGCCTTCCTCAACGTGGCCCCCGCTC...TGGTGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGCCTGGCTCCAGAAAATaGGCTTGGAGCGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ANRLDWALEVAGGLELQLPGSRK*AWSGGH
Trigger: GTGGCCCCCGCTCCAAGCCCATTTTCTGGAGCCAGG...CAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp CAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGTCTTGATGACTTGGGTGTGTGAGCGGGGGCCACGTTaGGGAAGGCGAAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: QCRSRRHPCDGVLMTWVCERGPR*GRRRAL
Trigger: CAATGCCCTTCGCCTTCCTCAACGTGGCCCCCGCTC...ACACACCCAAGTCATCAAGACACCATCACACGGATGGCGCCTACTTCGGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGTGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRCEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR CAA 72 bp TGCAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTaGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: CRTGGGGNQRIV*TGLLKLLAAWS
Trigger: GCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSSYSGG*GRRIAG
Trigger: TCCAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAACTCCCAATCTCAAGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSTPNLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGATTGGGAGT...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRSISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp GCTGGCGGCTTGGAGCTGCAGCTGGTAGGCCATCGGATGGATCTTGAAACCGTATGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: AGGLELQLVGHRMDLETVCEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...TACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAGCTCCAAGCCGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp GAGCTGCAGCTGGTAGGCCATCGGATGGATCTTGAAACCGTAGAGCCTGGGCACTGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: ELQLVGHRMDLETVEPGHCEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...GTGCCCAGGCTCTACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp GAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGCGTCAGCTGAGGTGGTaGCAGCCATTCTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EEHVRETSAEVGAIRVMVRQLRW*QPFCSS
Trigger: GGACGAGCAGAATGGCTGGCACCACCTCAGCTGACG...CACCATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp AGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGTCCGTCAGCTGAGGTGGTaGCAGCCATTCTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RACEGNQCRSRRHPCDGVRQLRW*QPFCSS
Trigger: GGACGAGCAGAATGGCTGGCACCACCTCAGCTGACG...GACACCATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp AGGTCTCTTGGGCCGGTACTCGGGATGCACCATGAAGAGCATGTGAGGGAAACCGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: RSLGPVLGMHHEEHVRETGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...GGTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGTACCGGCCCAAGAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACCTTCACGTCAGCGGCTaGACGGGGACCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDLHVSG*TGTRTG
Trigger: CCCAGTCCTGGTCCCCGTCCAGCCGCTGACGTGAAG...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CACATCCATGCACTTGGGGCAGTAGAGCTTCACCATGGCTTCACCTGGGATGTCCCTGGCTCCAGAAAATaGGCTTGGAGCGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: HIHALGAVELHHGFTWDVPGSRK*AWSGGH
Trigger: GTGGCCCCCGCTCCAAGCCCATTTTCTGGAGCCAGG...GACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CCA 90 bp CAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTCACGTCAGCTGAGGTaGTGCCAGCCATTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: QRIVLTGLLKLLAAWSCSSRQLR*CQPFCS
Trigger: CGAGCAGAATGGCTGGCACCACCTCAGCTGACGTGA...GCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGACTCGGGATGCACCATaGAGAGCATGTGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRTRDAP*RACEGN
Trigger: GTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGT...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAGGTGTCAGGACTCAGTaGAGTGAAATGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSGVRTQ*SEMGPR
Trigger: CCTCGGCCCCATTTCACTTCACTGAGTCCTGACACC...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp AGCCTGGGCACAAACTGGTTGGCAGGTCTCTTGGGCCGGTACTCGGGATGCACCGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLGTNWLAGLLGRYSGCTVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...GGTGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCATGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSCEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCATGGGCACAAACTGGTTaGCAGGTCTCTTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSWAQTG*QVSWAG
Trigger: ACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCA...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GATCTTGAAACCGTAGAGCCTGGGCACAAACTGGTTGGCAGGTCTCTTGGGCCGTGGGCACAAACTGGTTaGCAGGTCTCTTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: DLETVEPGHKLVGRSLGPWAQTG*QVSWAG
Trigger: ACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCA...CGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp AGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGTCTGGGCACAAACTGGTTaGCAGGTCTCTTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RACEGNQCRSRRHPCDGVWAQTG*QVSWAG
Trigger: ACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCA...GACACCATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GGCCATCGGATGGATCTTGAAACCGTAGAGCCTGGGCACAAACTGGTTGGCAGGAGCCTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GHRMDLETVEPGHKLVGRSLGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCT...CCTGCCAACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATCCATCCGATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTAGACTGCAGGACAGGTaGGGGAGGGAATCAGCGAAT +
Preference number: 4 (lower is better)
Translates to: GGGNQRIVLTGLLKLLAARLQDR*GRESAN
Trigger: ATTCGCTGATTCCCTCCCCCACCTGTCCTGCAGTCT...AGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGTCACGTCAGCTGAGGTaGTGCCAGCCATTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GRESANRLDWALEVAGGLSRQLR*CQPFCS
Trigger: CGAGCAGAATGGCTGGCACCACCTCAGCTGACGTGA...CAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCATCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSSTRQK*HVRMSG
Trigger: TCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGA...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGGGCTCCGTCCCAGCATaGAAATTGGGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKGSVPA*KLGRGR
Trigger: CCTGCCCCTCCCCAATTTCCATGCTGGGACGGAGCC...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp AGGTCTCTTGGGCCGGTACTCGGGATGCACCATGAAGAGCATGTGAGGGAAACCCCATCGGATGGATCTTaGAACCGTAGAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RSLGPVLGMHHEEHVRETPSDGS*NRRAWA
Trigger: TGCCCAGGCTCTACGGTTTCAAGATCCATCCGATGG...GGTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGTACCGGCCCAAGAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp GATCTTGAAACCGTAGAGCCTGGGCACAAACTGGTTGGCAGGTCTCTTGGGCCGGGTGAGGGGCAGGCGTaGCGTTATTTCATTACACGG +
Preference number: 4 (lower is better)
Translates to: DLETVEPGHKLVGRSLGPGEGQA*RYFITR
Trigger: CCGTGTAATGAAATAACGTCACGCCTGCCCCTCACC...CGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR TCA 90 bp GGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCCATCTTCACGTCAGCTaGGGTGGTGCCAGCCATTCT +
Preference number: 4 (lower is better)
Translates to: GNQRIVLTGLLKLLAAWSHLHVS*GGASHS
Trigger: AGAATGGCTGGCACCACCTCAGCTGACGTGAAGATG...GCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKSYSGG*GRRIAG
Trigger: TCCAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp TGCAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: CRTGGGGNQRIVLTGLLKSISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...CTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp GCTGGCGGCTTGGAGCTGCAGCTGGTAGGCCATCGGATGGATCTTGAAACCGTAACACCTCCTCTGAGCTaGTCATCTTCACGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGGLELQLVGHRMDLETVTPPLS*SSSRQL
Trigger: CAGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGT...TACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAGCTCCAAGCCGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GCTGGCGGCTTGGAGCTGCAGCTGGTAGGCCATCGGATGGATCTTGAAACCGTAGCGAATCGTCTTGACTaGGCTCTTGAAGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGGLELQLVGHRMDLETVANRLD*ALEVAG
Trigger: GCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGC...TACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAGCTCCAAGCCGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCCTTCACGTCAGCGGCTaGACGGGGACCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGLHVSG*TGTRTG
Trigger: CCCAGTCCTGGTCCCCGTCCAGCCGCTGACGTGAAG...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCCTTCACGTCAGCGGCTaGACGGGGACCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSLHVSG*TGTRTG
Trigger: CCCAGTCCTGGTCCCCGTCCAGCCGCTGACGTGAAG...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAGAACTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSELGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGTTC...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACTCCGGCAGAGAGCTCTaGAGTTGGGGGCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDSGREL*SWGLDQ
Trigger: CTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGA...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGCCAGGGGCCTGTCATaGGGCTCCGGCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGARGLS*GSGREL
Trigger: GAGCTCTCTGCCGGAGCCCCATGACAGGCCCCTGGC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CCGGTACTCGGGATGCACCATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAAGAGGCCTCACCATCTaGGCGATGCCACGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PVLGMHHEEHVRETSAEVRGLTI*AMPRLV
Trigger: TACCAACCGTGGCATCGCCCAGATGGTGAGGCCTCT...TACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGTACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677758.1
3UTR CAA 72 bp CATGGGGCTCCGGCAGAGAGCTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAATCGTACTGACAGCACT +
Preference number: 4 (lower is better)
Translates to: HGAPAESSGVGG*TRSCNNRTDST
Trigger: AGTGCTGTCAGTACGATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGAGCCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp TGCAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: CRTGGGGNQRIVLTGLLKTMKSM*GKPVPK
Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...CTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp GGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GRESANRLDWALEVAGGLTMKSM*GKPVPK
Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...CAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACGGTGTCAGGACTCAGTaGAGTGAAATGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDGVRTQ*SEMGPR
Trigger: CCTCGGCCCCATTTCACTTCACTGAGTCCTGACACC...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp AATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: NRLDWALEVAGGLELQLVSISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...TACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp GCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: ANRLDWALEVAGGLELQLVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...CAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp GAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGACACCTCCTCTGAGCTaGTCATCTTCACGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: EEHVRETSAEVGAIRVMVTPPLS*SSSRQL
Trigger: CAGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGT...CACCATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 4 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGCGAATCGTCTTGACTaGGCTCTTGAAGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRESANRLDWALEVAGGLANRLD*ALEVAG
Trigger: GCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGC...CAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp CATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGAGACTGCAGGACAGGTaGGGGAGGGAATCAGCGAAT +
Preference number: 4 (lower is better)
Translates to: HEEHVRETSAEVGAIRVMRLQDR*GRESAN
Trigger: ATTCGCTGATTCCCTCCCCCACCTGTCCTGCAGTCT...CATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGCTTCACGTCAGCGGCTaGACGGGGACCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKLHVSG*TGTRTG
Trigger: CCCAGTCCTGGTCCCCGTCCAGCCGCTGACGTGAAG...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACTCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDSTRQK*HVRMSG
Trigger: TCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGA...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATGGCTCCGTCCCAGCATaGAAATTGGGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYGSVPA*KLGRGR
Trigger: CCTGCCCCTCCCCAATTTCCATGCTGGGACGGAGCC...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAAGCCTCCTGAGTAGCTaGGATTACAGAGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSSLLSS*DYRGVP
Trigger: TGGCACACCTCTGTAATCCCAGCTACTCAGGAGGCT...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR CAA 72 bp AATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTaGGAGCTGCAGCTGGTAGGCCATCGGATGGATCTT +
Preference number: 4 (lower is better)
Translates to: NRLDWALEVAGG*ELQLVGHRMDL
Trigger: AAGATCCATCCGATGGCCTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGCCAGGACACCTCCTCTaGGCTGCTCATCTTCACGTC +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAPGHLL*AAHLHV
Trigger: GACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGG...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAACTCGGGATGCACCATaGAGAGCATGTGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: NRLDWALEVAGGLELQLVTRDAP*RACEGN
Trigger: GTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGT...TACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKGIQEG*GVKSPA
Trigger: GGCTGGACTCTTGACACCTCACCCTTCCTGAATTCC...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAACTCCCAATCTCAAGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLETPNLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGATTGGGAGT...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGTGGGGGACATGGAGCTaGGCAGAACAGACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLWGTWS*AEQTLP
Trigger: GGGAAGGGTCTGTTCTGCTCAGCTCCATGTCCCCCA...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGTGGGGGACATGGAGCTaGGCAGAACAGACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRWGTWS*AEQTLP
Trigger: GGGAAGGGTCTGTTCTGCTCAGCTCCATGTCCCCCA...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGGGGGACATGGAGCTaGGCAGAACAGACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYWGTWS*AEQTLP
Trigger: GGGAAGGGTCTGTTCTGCTCAGCTCCATGTCCCCCA...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCACACAGAAGAATTCATTaGCACGGAGCCCACAGAACC +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSHRRIH*HGAHRT
Trigger: GGTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTG...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDSISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGACACCTCCTCTGAGCTaGTCATCTTCACGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKTPPLS*SSSRQR
Trigger: CCGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGT...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp GCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGTTCTGCTCGTCCCTTTaGACTTCTCCATTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ANRLDWALEVAGGLELQLFCSSL*TSPFPL
Trigger: AAGGGGAAATGGAGAAGTGCAAAGGGACGAGCAGAA...CAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp CACATCCATGCACTTGGGGCAGTAGAGCTTCACCATGGCTTCACCTGGGATGTCTGGTGCCAGCCATTCTaGTCGTCCCTTTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: HIHALGAVELHHGFTWDVWCQPF*SSLCTS
Trigger: AGAAGTGCAAAGGGACGAGCAGAATGGCTGGCACCA...GACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR GCA 90 bp CAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTTGGTGCCAGCCATTCTaGTCGTCCCTTTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: QDRWGRESANRLDWALEVWCQPF*SSLCTS
Trigger: AGAAGTGCAAAGGGACGAGCAGAATGGCTGGCACCA...AACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAGCCAATGGGAAGCATTaGCTGGTTCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSANGKH*LVLTVH
Trigger: GTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGC...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGGACAGTAACCAAAGTCTCCTTGCTGGTACTTTTCCAACATCTGGGCGATGCCGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: RTVTKVSLLVLFQHLGDAGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...GGCATCGCCCAGATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTACTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CCA 90 bp GATCTTGAAACCGTAGAGCCTGGGCACAAACTGGTTGGCAGGTCTCTTGGGCCGCACAGAGTGGATTCCTaGCTCCAGAAAATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: DLETVEPGHKLVGRSLGPHRVDS*LQKMGL
Trigger: CAAGCCCATTTTCTGGAGCCAGGAATCCACTCTGTG...CGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGGTCGGGAACAGGAACTaGGCACAAACTGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKVGNRN*AQTGWQ
Trigger: CTGCCAACCAGTTTGTGCCCAGTTCCTGTTCCCGAC...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTCCGGCAGAGAGCTCTaGAGTTGGGGGCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFSGREL*SWGLDQ
Trigger: CTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGA...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCTCCGGCAGAGAGCTCTaGAGTTGGGGGCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGSGREL*SWGLDQ
Trigger: CTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGA...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGTCCGGCAGAGAGCTCTaGAGTTGGGGGCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLSGREL*SWGLDQ
Trigger: CTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGA...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAATCCGGCAGAGAGCTCTaGAGTTGGGGGCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLESGREL*SWGLDQ
Trigger: CTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGA...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGTCCGGCAGAGAGCTCTaGAGTTGGGGGCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRSGREL*SWGLDQ
Trigger: CTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGA...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAATCCCGGCACTTTaGGAGGTCGAGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAVIPAL*EVEEGR
Trigger: TCTGCCCTCCTCGACCTCCCAAAGTGCCGGGATTAC...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGAGTCCCAGTTTATTGTaGAGGAAAATGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRSPSLL*RKMGDM
Trigger: CATGTCCCCCATTTTCCTCCACAATAAACTGGGACT...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp GACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTTTCACCTGGGATGTCTaGAAGGCCAATGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: DRWGRESANRLDWALEVAFTWDV*KANGKH
Trigger: ATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAA...AGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp AGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGTTCACCTGGGATGTCTaGAAGGCCAATGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: RTGGGGNQRIVLTGLLKLFTWDV*KANGKH
Trigger: ATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAA...CAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACACTCGGGATGCACCATaGAGAGCATGTGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDTRDAP*RACEGN
Trigger: GTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGT...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GGCCAATGGGAAGCATTGGCTGGTTCTCACAGTACACACGAGGACAGTAACCAACATCTTCACGTCAGCTaGGGTGGTGCCAGCCATTCT +
Preference number: 4 (lower is better)
Translates to: GQWEALAGSHSTHEDSNQHLHVS*GGASHS
Trigger: AGAATGGCTGGCACCACCTCAGCTGACGTGAAGATG...TTGGTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR TCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGACAGGGATGAGCTGCTaGTGGTACACTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKTGMSC*WYTSLS
Trigger: GCTCAGAGAAGTGTACCATCAGCAGCTCATCCCTGT...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCCCTCCCGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSPPGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGG...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCCTCCCGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLPPGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGG...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCCCTCCCGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFPPGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGG...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGGGTGTCAGGACTCAGTaGAGTGAAATGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRGVRTQ*SEMGPR
Trigger: CCTCGGCCCCATTTCACTTCACTGAGTCCTGACACC...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTGGGGGACATGGAGCTaGGCAGAACAGACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKWGTWS*AEQTLP
Trigger: GGGAAGGGTCTGTTCTGCTCAGCTCCATGTCCCCCA...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp GGCCATCGGATGGATCTTGAAACCGTAGAGCCTGGGCACAAACTGGTTGGCAGGTTCCAGTTCTTCATCTaGAACACAGCCCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: GHRMDLETVEPGHKLVGRFQFFI*NTARPN
Trigger: ATTTGGCCGGGCTGTGTTTCAGATGAAGAACTGGAA...CCTGCCAACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATCCATCCGATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR GCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAASISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSIKHLG*LLNQVT
Trigger: AGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GATCTTGAAACCGTAGAGCCTGGGCACAAACTGGTTGGCAGGTCTCTTGGGCCGATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: DLETVEPGHKLVGRSLGPIKHLG*LLNQVT
Trigger: AGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT...CGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAATGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLECEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCATGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLACEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGTGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLCEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCTGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGCEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGTACTTTTCCAACATCTaGGCGATGCCACGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: GRESANRLDWALEVAGGLYFSNI*AMPRLV
Trigger: TACCAACCGTGGCATCGCCCAGATGTTGGAAAAGTA...CAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CCA 90 bp TGCAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 4 (lower is better)
Translates to: CRTGGGGNQRIVLTGLLKMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...CTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp AGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGTCATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 4 (lower is better)
Translates to: RACEGNQCRSRRHPCDGVMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...GACACCATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp CATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGCCAATGGGAAGCATTaGCTGGTTCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: HEEHVRETSAEVGAIRVMANGKH*LVLTVH
Trigger: GTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGC...CATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCATGTCTGAAAGGCCAATaGGAAGCATTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSCLKGQ*EALAGS
Trigger: AGAACCAGCCAATGCTTCCCATTGGCCTTTCAGACA...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGTCTGAAAGGCCAATaGGAAGCATTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GNQRIVLTGLLKLLAAWSCLKGQ*EALAGS
Trigger: AGAACCAGCCAATGCTTCCCATTGGCCTTTCAGACA...GCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp GATCTTGAAACCGTAGAGCCTGGGCACAAACTGGTTGGCAGGTCTCTTGGGCCGTGTCTGAAAGGCCAATaGGAAGCATTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: DLETVEPGHKLVGRSLGPCLKGQ*EALAGS
Trigger: AGAACCAGCCAATGCTTCCCATTGGCCTTTCAGACA...CGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp CACATCCATGCACTTGGGGCAGTAGAGCTTCACCATGGCTTCACCTGGGATGTCAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: HIHALGAVELHHGFTWDVSRASP*LHLGCL
Trigger: CAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACT...GACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CCA 90 bp CAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: QDRWGRESANRLDWALEVSRASP*LHLGCL
Trigger: CAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACT...AACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp CAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTACACATCCATGCACTTaGGGCAGTAGAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: QDRWGRESANRLDWALEVTHPCT*GSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT...AACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp TGCAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 4 (lower is better)
Translates to: CRTGGGGNQRIVLTGLLKGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...CTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGTGGGCACAAACTGGTTaGCAGGTCTCTTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRWAQTG*QVSWAG
Trigger: ACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCA...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAATGGGCACAAACTGGTTaGCAGGTCTCTTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEWAQTG*QVSWAG
Trigger: ACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCA...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCGGACCAGGACTGGGGTaGGGTAGGGAAGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGGPGLG*GREVAT
Trigger: AGTAGCAACTTCCCTACCCCACCCCAGTCCTGGTCC...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAGGACCAGGACTGGGGTaGGGTAGGGAAGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEGPGLG*GREVAT
Trigger: AGTAGCAACTTCCCTACCCCACCCCAGTCCTGGTCC...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTCGGGAACAGGAACTaGGCACAAACTGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAVGNRN*AQTGWQ
Trigger: CTGCCAACCAGTTTGTGCCCAGTTCCTGTTCCCGAC...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAATCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLESTRQK*HVRMSG
Trigger: TCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGA...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGTCCGGCAGAGAGCTCTaGAGTTGGGGGCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVSGREL*SWGLDQ
Trigger: CTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGA...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTCCGGCAGAGAGCTCTaGAGTTGGGGGCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKSGREL*SWGLDQ
Trigger: CTGGTCAAGCCCCCAACTCCAGAGCTCTCTGCCGGA...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGGGCTCCGTCCCAGCATaGAAATTGGGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQGSVPA*KLGRGR
Trigger: CCTGCCCCTCCCCAATTTCCATGCTGGGACGGAGCC...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACGGCTCCGTCCCAGCATaGAAATTGGGGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYGSVPA*KLGRGR
Trigger: CCTGCCCCTCCCCAATTTCCATGCTGGGACGGAGCC...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGCCAGGACACCTCCTCTaGGCTGCTCATCTTCACGTC +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVPGHLL*AAHLHV
Trigger: GACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGG...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGCCAGGACACCTCCTCTaGGCTGCTCATCTTCACGTC +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLPGHLL*AAHLHV
Trigger: GACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGG...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGACCAGGACACCTCCTCTaGGCTGCTCATCTTCACGTC +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGPGHLL*AAHLHV
Trigger: GACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGG...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGTTCACCTGGGATGTCTaGAAGGCCAATGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKFTWDV*KANGKH
Trigger: ATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAA...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp GATGCCACGGTTGGTAAGGATGTAGCGGGCGTGGATCAATCCATAAAGCATCTCACTCGGGATGCACCATaGAGAGCATGTGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: DATVGKDVAGVDQSIKHLTRDAP*RACEGN
Trigger: GTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGT...GAGATGCTTTATGGATTGATCCACGCCCGCTACATCCTTACCAACCGTGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR TCA 90 bp GATGGTGTCTTGATGACTTGGGTGTGTACACATCCATGCACTTGGGGCAGTAGACCATCGGATGGATCTTaGAACCGTAGAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DGVLMTWVCTHPCTWGSRPSDGS*NRRAWA
Trigger: TGCCCAGGCTCTACGGTTTCAAGATCCATCCGATGG...TCTACTGCCCCAAGTGCATGGATGTGTACACACCCAAGTCATCAAGACACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR TCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGACAGGGATGAGCTGCTaGTGGTACACTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAATGMSC*WYTSLS
Trigger: GCTCAGAGAAGTGTACCATCAGCAGCTCATCCCTGT...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCACATCATAATAGATGGTaGTCACCATGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSHHNRW*SPCTGM
Trigger: CATCCCTGTGCATGGTGATCACCATCTATTATGATG...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAAAAGTCCTGAACTATTaGGGAACAAGTACATGCGGC +
Preference number: 4 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSKVLNY*GTSTCG
Trigger: GCCGCATGTACTTGTTCCTCAATAGTTCAGGACTTT...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGGIQEG*GVKSPA
Trigger: GGCTGGACTCTTGACACCTCACCCTTCCTGAATTCC...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYGIQEG*GVKSPA
Trigger: GGCTGGACTCTTGACACCTCACCCTTCCTGAATTCC...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLGIQEG*GVKSPA
Trigger: GGCTGGACTCTTGACACCTCACCCTTCCTGAATTCC...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQSYSGG*GRRIAG
Trigger: TCCAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLSYSGG*GRRIAG
Trigger: TCCAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGACTCCCAATCTCAAGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQTPNLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGATTGGGAGT...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGCCTCCCGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKPPGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCGGGAGG...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRSISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLESISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: AFFLAAVGNVLSTASNDESISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGATGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGCEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTGTGAGGGAAACCAGTaGCGAAGTAGGCGCCATCCG +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKCEGNQ*RSRRHP
Trigger: CGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACA...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp CATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGTTCTGCTCGTCCCTTTaGACTTCTCCATTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HEEHVRETSAEVGAIRVMFCSSL*TSPFPL
Trigger: AAGGGGAAATGGAGAAGTGCAAAGGGACGAGCAGAA...CATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CCA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGGGTTGGCAGGTCTCTTaGGCCGGTACTCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVGWQVS*AGTRDA
Trigger: TGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACC...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGATGGGCACAAACTGGTTaGCAGGTCTCTTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGWAQTG*QVSWAG
Trigger: ACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCA...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CAATGGGAAGCATTGGCTGGTTCTCACAGTACACACGAGGACAGTAACCAAAGTAGCCTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QWEALAGSHSTHEDSNQSSLGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCT...ACTTTGGTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGGGACCAGGACTGGGGTaGGGTAGGGAAGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKGPGLG*GREVAT
Trigger: AGTAGCAACTTCCCTACCCCACCCCAGTCCTGGTCC...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGAACTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AFFLAAVGNVLSTASNDEELGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGTTC...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGAACTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAELGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGTTC...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATGTCGGGAACAGGAACTaGGCACAAACTGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYVGNRN*AQTGWQ
Trigger: CTGCCAACCAGTTTGTGCCCAGTTCCTGTTCCCGAC...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGTCGGGAACAGGAACTaGGCACAAACTGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAVGNRN*AQTGWQ
Trigger: CTGCCAACCAGTTTGTGCCCAGTTCCTGTTCCCGAC...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGTCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVSTRQK*HVRMSG
Trigger: TCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGA...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGATCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGSTRQK*HVRMSG
Trigger: TCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGA...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRSTRQK*HVRMSG
Trigger: TCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGA...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGAGAGCTCTGGAGTTaGGGGCTTGACCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGRELWS*GLDQEL
Trigger: CAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCT...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATAGAGAGCTCTGGAGTTaGGGGCTTGACCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYRELWS*GLDQEL
Trigger: CAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCT...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACGTCAAGAGTCCAGCCTaGGGAAGAACCAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDVKSPA*GRTKSP
Trigger: AGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGGTAATCCCGGCACTTTaGGAGGTCGAGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLVIPAL*EVEEGR
Trigger: TCTGCCCTCCTCGACCTCCCAAAGTGCCGGGATTAC...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGTCAGGTCAGCCTGTCTaGGCAGAATCCACACTAGAG +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAASGQPV*AESTLE
Trigger: CTCTAGTGTGGATTCTGCCCAGACAGGCTGACCTGA...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGCTCAGTGAAGTGAAATaGGGCCGAGGAAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAALSEVK*GRGSQR
Trigger: TCTCTGGCTTCCTCGGCCCCATTTCACTTCACTGAG...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCAGGACACCTCCTCTaGGCTGCTCATCTTCACGTC +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQPGHLL*AAHLHV
Trigger: GACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGG...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGTTCACCTGGGATGTCTaGAAGGCCAATGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAFTWDV*KANGKH
Trigger: ATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAA...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLTMKSM*GKPVPK
Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYTMKSM*GKPVPK
Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGTMKSM*GKPVPK
Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGACTCGGGATGCACCATaGAGAGCATGTGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLTRDAP*RACEGN
Trigger: GTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGT...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCACTCGGGATGCACCATaGAGAGCATGTGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGTRDAP*RACEGN
Trigger: GTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGT...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCACTCGGGATGCACCATaGAGAGCATGTGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFTRDAP*RACEGN
Trigger: GTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGT...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAACAGGGATGAGCTGCTaGTGGTACACTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLETGMSC*WYTSLS
Trigger: GCTCAGAGAAGTGTACCATCAGCAGCTCATCCCTGT...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCACAGGGATGAGCTGCTaGTGGTACACTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSTGMSC*WYTSLS
Trigger: GCTCAGAGAAGTGTACCATCAGCAGCTCATCCCTGT...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAACAGGGATGAGCTGCTaGTGGTACACTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: AFFLAAVGNVLSTASNDETGMSC*WYTSLS
Trigger: GCTCAGAGAAGTGTACCATCAGCAGCTCATCCCTGT...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCACACCATGCACAGGGATaGGCTGCTGATGGTACACTT +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAHHAQG*AADGTL
Trigger: AAGTGTACCATCAGCAGCTCATCCCTGTGCATGGTG...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATCACCATGCACAGGGATaGGCTGCTGATGGTACACTT +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYHHAQG*AADGTL
Trigger: AAGTGTACCATCAGCAGCTCATCCCTGTGCATGGTG...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCCACCATGCACAGGGATaGGCTGCTGATGGTACACTT +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSHHAQG*AADGTL
Trigger: AAGTGTACCATCAGCAGCTCATCCCTGTGCATGGTG...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCCTGGAGTTGGGGGCTTaGCCAGGAGTTGCAATAATC +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFLELGA*PGVAII
Trigger: GATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAG...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCACTGGAGTTGGGGGCTTaGCCAGGAGTTGCAATAATC +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLALELGA*PGVAII
Trigger: GATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAG...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATCTGGAGTTGGGGGCTTaGCCAGGAGTTGCAATAATC +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYLELGA*PGVAII
Trigger: GATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAG...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRGIQEG*GVKSPA
Trigger: GGCTGGACTCTTGACACCTCACCCTTCCTGAATTCC...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MDKTGETELDVNRQVTGLGIQEG*GVKSPA
Trigger: GGCTGGACTCTTGACACCTCACCCTTCCTGAATTCC...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGGIQEG*GVKSPA
Trigger: GGCTGGACTCTTGACACCTCACCCTTCCTGAATTCC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGGGAATTCAGGAAGGGTaGGGTGTCAAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKGIQEG*GVKSPA
Trigger: GGCTGGACTCTTGACACCTCACCCTTCCTGAATTCC...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVSISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGAGCATCTCGGCTGCCTaGTCAATCAGGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLSISAA*SIRSLW
Trigger: CCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKIKHLG*LLNQVT
Trigger: AGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGACACCTCCTCTGAGCTaGTCATCTTCACGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRTPPLS*SSSRQR
Trigger: CCGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGT...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGCCAATGGGAAGCATTaGCTGGTTCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAANGKH*LVLTVH
Trigger: GTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGC...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACTGTCTGAAAGGCCAATaGGAAGCATTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDCLKGQ*EALAGS
Trigger: AGAACCAGCCAATGCTTCCCATTGGCCTTTCAGACA...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAASRASP*LHLGCL
Trigger: CAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACT...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGACACATCCATGCACTTaGGGCAGTAGAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAATHPCT*GSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTGGGCACAAACTGGTTaGCAGGTCTCTTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLWAQTG*QVSWAG
Trigger: ACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCA...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGTGGGCACAAACTGGTTaGCAGGTCTCTTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQWAQTG*QVSWAG
Trigger: ACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCA...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GGCCAATGGGAAGCATTGGCTGGTTCTCACAGTACACACGAGGACAGTAACCAACACAGAGTGGATTCCTaGCTCCAGAAAATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GQWEALAGSHSTHEDSNQHRVDS*LQKMGL
Trigger: CAAGCCCATTTTCTGGAGCCAGGAATCCACTCTGTG...TTGGTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGAACTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGELGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGTTC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGGAACTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRELGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGTTC...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGGTCGGGAACAGGAACTaGGCACAAACTGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: MDKTGETELDVNRQVTGLVGNRN*AQTGWQ
Trigger: CTGCCAACCAGTTTGTGCCCAGTTCCTGTTCCCGAC...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGTCGGGAACAGGAACTaGGCACAAACTGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGVGNRN*AQTGWQ
Trigger: CTGCCAACCAGTTTGTGCCCAGTTCCTGTTCCCGAC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACTCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYSTRQK*HVRMSG
Trigger: TCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGA...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGTCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGA +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQSTRQK*HVRMSG
Trigger: TCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGA...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGAGAGAGCTCTGGAGTTaGGGGCTTGACCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVRELWS*GLDQEL
Trigger: CAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCT...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGAGAGAGCTCTGGAGTTaGGGGCTTGACCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLRELWS*GLDQEL
Trigger: CAACTCCTGGTCAAGCCCCCAACTCCAGAGCTCTCT...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTCAAGAGTCCAGCCTaGGGAAGAACCAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAVKSPA*GRTKSP
Trigger: AGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACGTAATCCCGGCACTTTaGGAGGTCGAGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYVIPAL*EVEEGR
Trigger: TCTGCCCTCCTCGACCTCCCAAAGTGCCGGGATTAC...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAATCAGGTCAGCCTGTCTaGGCAGAATCCACACTAGAG +
Preference number: 4 (lower is better)
Translates to: AFFLAAVGNVLSTASNDESGQPV*AESTLE
Trigger: CTCTAGTGTGGATTCTGCCCAGACAGGCTGACCTGA...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAAGGGATGGGGGATACTaGAACACTCAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLERDGGY*NTQMMG
Trigger: CCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCT...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAAGGGATGGGGGATACTaGAACACTCAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLARDGGY*NTQMMG
Trigger: CCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCT...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCCTCCTGAGTAGCTaGGATTACAGAGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGSLLSS*DYRGVP
Trigger: TGGCACACCTCTGTAATCCCAGCTACTCAGGAGGCT...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCAGCCTCCTGAGTAGCTaGGATTACAGAGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSSLLSS*DYRGVP
Trigger: TGGCACACCTCTGTAATCCCAGCTACTCAGGAGGCT...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAACTCAGTGAAGTGAAATaGGGCCGAGGAAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: AFFLAAVGNVLSTASNDELSEVK*GRGSQR
Trigger: TCTCTGGCTTCCTCGGCCCCATTTCACTTCACTGAG...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATCTCAGTGAAGTGAAATaGGGCCGAGGAAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYLSEVK*GRGSQR
Trigger: TCTCTGGCTTCCTCGGCCCCATTTCACTTCACTGAG...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCCTCAGTGAAGTGAAATaGGGCCGAGGAAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFLSEVK*GRGSQR
Trigger: TCTCTGGCTTCCTCGGCCCCATTTCACTTCACTGAG...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTCCAAAGTCTCCTTGCTaGTACTTTTCCAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: DRWGRESANRLDWALEVAPKSPC*YFSNAQ
Trigger: CTGAGCATTGGAAAAGTACCAGCAAGGAGACTTTGG...AGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677758.1
3UTR CAA 72 bp CTCACAGTACACACGAGGACAGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAACATCTGGGCGATGCCACG +
Preference number: 4 (lower is better)
Translates to: LTVHTRTVTKVS*LVLFQHLGDAT
Trigger: CGTGGCATCGCCCAGATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTACTGTCCTCGTGTGTACTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR TCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTCACCTGGGATGTCTaGAAGGCCAATGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFFTWDV*KANGKH
Trigger: ATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAA...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCATTCACCTGGGATGTCTaGAAGGCCAATGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAFTWDV*KANGKH
Trigger: ATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAA...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGTMKSM*GKPVPK
Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKTMKSM*GKPVPK
Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGACAGGGATGAGCTGCTaGTGGTACACTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: MDKTGETELDVNRQVTGLTGMSC*WYTSLS
Trigger: GCTCAGAGAAGTGTACCATCAGCAGCTCATCCCTGT...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGACAGGGATGAGCTGCTaGTGGTACACTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRTGMSC*WYTSLS
Trigger: GCTCAGAGAAGTGTACCATCAGCAGCTCATCCCTGT...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGCACCATGCACAGGGATaGGCTGCTGATGGTACACTT +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKHHAQG*AADGTL
Trigger: AAGTGTACCATCAGCAGCTCATCCCTGTGCATGGTG...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACCATCATAATAGATGGTaGTCACCATGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: AAVGNVLSTASNDEANLDHHNRW*SPCTGM
Trigger: CATCCCTGTGCATGGTGATCACCATCTATTATGATG...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGAAAGTCCTGAACTATTaGGGAACAAGTACATGCGGC +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKKVLNY*GTSTCG
Trigger: GCCGCATGTACTTGTTCCTCAATAGTTCAGGACTTT...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCCACAGAAGAATTCATTaGCACGGAGCCCACAGAACC +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGHRRIH*HGAHRT
Trigger: GGTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTG...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCCACAGAAGAATTCATTaGCACGGAGCCCACAGAACC +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFHRRIH*HGAHRT
Trigger: GGTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTG...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACACACCTCCTCTGAGCTaGTCATCTTCACGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYTPPLS*SSSRQR
Trigger: CCGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGT...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGACACCTCCTCTGAGCTaGTCATCTTCACGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLTPPLS*SSSRQR
Trigger: CCGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGT...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGTCAATCAGGTCACTCTaGTTGGGGTTGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAASIRSL*LGLSSS
Trigger: ACTGGAAGACAACCCCAACCAGAGTGACCTGATTGA...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGGCCAATGGGAAGCATTaGCTGGTTCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRANGKH*LVLTVH
Trigger: GTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGC...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYSRASP*LHLGCL
Trigger: CAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACT...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLSRASP*LHLGCL
Trigger: CAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACT...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGSRASP*LHLGCL
Trigger: CAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACT...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSSRASP*LHLGCL
Trigger: CAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACT...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGACACATCCATGCACTTaGGGCAGTAGAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRTHPCT*GSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATACACATCCATGCACTTaGGGCAGTAGAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYTHPCT*GSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAACACATCCATGCACTTaGGGCAGTAGAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLATHPCT*GSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGGACAGTAACCAAAGTCTCCTTGCTGGTACTTTTCCAACATCTGGGCGATGCCACACATCCATGCACTTaGGGCAGTAGAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: RTVTKVSLLVLFQHLGDATHPCT*GSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT...GGCATCGCCCAGATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTACTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGGAACTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLELGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGTTC...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGGAACTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVELGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGTTC...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGGAACTGGGCACAAACTaGTTGGCAGGTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQELGTN*LAGLLG
Trigger: GCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGTTC...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGGTCGGGAACAGGAACTaGGCACAAACTGGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLVGNRN*AQTGWQ
Trigger: CTGCCAACCAGTTTGTGCCCAGTTCCTGTTCCCGAC...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCGTCAAGAGTCCAGCCTaGGGAAGAACCAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFVKSPA*GRTKSP
Trigger: AGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGTCAGGTCAGCCTGTCTaGGCAGAATCCACACTAGAG +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVSGQPV*AESTLE
Trigger: CTCTAGTGTGGATTCTGCCCAGACAGGCTGACCTGA...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGAGGGATGGGGGATACTaGAACACTCAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRRDGGY*NTQMMG
Trigger: CCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCT...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGATTCACCTGGGATGTCTaGAAGGCCAATGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGFTWDV*KANGKH
Trigger: ATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAA...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGTTCACCTGGGATGTCTaGAAGGCCAATGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLFTWDV*KANGKH
Trigger: ATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAA...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYTMKSM*GKPVPK
Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGACTCGGGATGCACCATaGAGAGCATGTGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQTRDAP*RACEGN
Trigger: GTTTCCCTCACATGCTCTTCATGGTGCATCCCGAGT...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGCACCATGCACAGGGATaGGCTGCTGATGGTACACTT +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLHHAQG*AADGTL
Trigger: AAGTGTACCATCAGCAGCTCATCCCTGTGCATGGTG...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACCTGGAGTTGGGGGCTTaGCCAGGAGTTGCAATAATC +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYLELGA*PGVAII
Trigger: GATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAG...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGGGCAGTGCAGGATGCTaGGGGTGTTACAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLGSAGC*GCYRKI
Trigger: TATCTTTCTGTAACACCCTCAGCATCCTGCACTGCC...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGCACAGAAGAATTCATTaGCACGGAGCCCACAGAACC +
Preference number: 4 (lower is better)
Translates to: MDKTGETELDVNRQVTGLHRRIH*HGAHRT
Trigger: GGTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTG...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGCACAGAAGAATTCATTaGCACGGAGCCCACAGAACC +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVHRRIH*HGAHRT
Trigger: GGTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTG...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGIKHLG*LLNQVT
Trigger: AGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRIKHLG*LLNQVT
Trigger: AGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYIKHLG*LLNQVT
Trigger: AGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GATGGTGTCTTGATGACTTGGGTGTGTACACATCCATGCACTTGGGGCAGTAGAATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: DGVLMTWVCTHPCTWGSRIKHLG*LLNQVT
Trigger: AGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT...TCTACTGCCCCAAGTGCATGGATGTGTACACACCCAAGTCATCAAGACACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR GCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAATCAATCAGGTCACTCTaGTTGGGGTTGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLESIRSL*LGLSSS
Trigger: ACTGGAAGACAACCCCAACCAGAGTGACCTGATTGA...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGTCAATCAGGTCACTCTaGTTGGGGTTGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLSIRSL*LGLSSS
Trigger: ACTGGAAGACAACCCCAACCAGAGTGACCTGATTGA...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGTACTTTTCCAACATCTaGGCGATGCCACGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLYFSNI*AMPRLV
Trigger: TACCAACCGTGGCATCGCCCAGATGTTGGAAAAGTA...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAATACTTTTCCAACATCTaGGCGATGCCACGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEYFSNI*AMPRLV
Trigger: TACCAACCGTGGCATCGCCCAGATGTTGGAAAAGTA...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCTACTTTTCCAACATCTaGGCGATGCCACGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGYFSNI*AMPRLV
Trigger: TACCAACCGTGGCATCGCCCAGATGTTGGAAAAGTA...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAATACTTTTCCAACATCTaGGCGATGCCACGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: AFFLAAVGNVLSTASNDEYFSNI*AMPRLV
Trigger: TACCAACCGTGGCATCGCCCAGATGTTGGAAAAGTA...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGCCAATGGGAAGCATTaGCTGGTTCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGANGKH*LVLTVH
Trigger: GTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGGCCAATGGGAAGCATTaGCTGGTTCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLANGKH*LVLTVH
Trigger: GTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGC...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CAATGGGAAGCATTGGCTGGTTCTCACAGTACACACGAGGACAGTAACCAAAGTGCCAATGGGAAGCATTaGCTGGTTCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: QWEALAGSHSTHEDSNQSANGKH*LVLTVH
Trigger: GTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGC...ACTTTGGTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAATGTCTGAAAGGCCAATaGGAAGCATTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLECLKGQ*EALAGS
Trigger: AGAACCAGCCAATGCTTCCCATTGGCCTTTCAGACA...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTGTCTGAAAGGCCAATaGGAAGCATTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFCLKGQ*EALAGS
Trigger: AGAACCAGCCAATGCTTCCCATTGGCCTTTCAGACA...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAATGTCTGAAAGGCCAATaGGAAGCATTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AFFLAAVGNVLSTASNDECLKGQ*EALAGS
Trigger: AGAACCAGCCAATGCTTCCCATTGGCCTTTCAGACA...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACACATCCATGCACTTaGGGCAGTAGAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVTHPCT*GSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGACACATCCATGCACTTaGGGCAGTAGAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKTHPCT*GSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGGTCAAGAGTCCAGCCTaGGGAAGAACCAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLVKSPA*GRTKSP
Trigger: AGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGGTCAAGAGTCCAGCCTaGGGAAGAACCAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRVKSPA*GRTKSP
Trigger: AGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGAAGATATTTGCACTGTaGAATTCAGGAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKKIFAL*NSGRVR
Trigger: CCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACTCAGGTCAGCCTGTCTaGGCAGAATCCACACTAGAG +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYSGQPV*AESTLE
Trigger: CTCTAGTGTGGATTCTGCCCAGACAGGCTGACCTGA...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGAGGGATGGGGGATACTaGAACACTCAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLRDGGY*NTQMMG
Trigger: CCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCT...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGGGTCTTAGAGACATaGACAAGACAGGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYWVLET*TRQGKQ
Trigger: CTGTTTCCCCTGTCTTGTCCATGTCTCTAAGACCCA...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGCTGCTAGTTCAGTCTaGTACTGGGTCTTAGAGACA +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSAASSV*YWVLET
Trigger: TGTCTCTAAGACCCAGTACCAGACTGAACTAGCAGC...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATGCTGCTAGTTCAGTCTaGTACTGGGTCTTAGAGACA +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYAASSV*YWVLET
Trigger: TGTCTCTAAGACCCAGTACCAGACTGAACTAGCAGC...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAGCTGCTAGTTCAGTCTaGTACTGGGTCTTAGAGACA +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEAASSV*YWVLET
Trigger: TGTCTCTAAGACCCAGTACCAGACTGAACTAGCAGC...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
3UTR CAA 72 bp ATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: IPVLCKVGVAFF*AAVGNVLSTAS
Trigger: CGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACTTCACCTGGGATGTCTaGAAGGCCAATGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYFTWDV*KANGKH
Trigger: ATGCTTCCCATTGGCCTTTCAGACATCCCAGGTGAA...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAACATCATAATAGATGGTaGTCACCATGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: AFFLAAVGNVLSTASNDEHHNRW*SPCTGM
Trigger: CATCCCTGTGCATGGTGATCACCATCTATTATGATG...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACATCATAATAGATGGTaGTCACCATGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEHHNRW*SPCTGM
Trigger: CATCCCTGTGCATGGTGATCACCATCTATTATGATG...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCCATCATAATAGATGGTaGTCACCATGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGHHNRW*SPCTGM
Trigger: CATCCCTGTGCATGGTGATCACCATCTATTATGATG...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCACATCATAATAGATGGTaGTCACCATGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAHHNRW*SPCTGM
Trigger: CATCCCTGTGCATGGTGATCACCATCTATTATGATG...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATAAAGTCCTGAACTATTaGGGAACAAGTACATGCGGC +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYKVLNY*GTSTCG
Trigger: GCCGCATGTACTTGTTCCTCAATAGTTCAGGACTTT...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAAAAGTCCTGAACTATTaGGGAACAAGTACATGCGGC +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEKVLNY*GTSTCG
Trigger: GCCGCATGTACTTGTTCCTCAATAGTTCAGGACTTT...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAAAAGTCCTGAACTATTaGGGAACAAGTACATGCGGC +
Preference number: 4 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAKVLNY*GTSTCG
Trigger: GCCGCATGTACTTGTTCCTCAATAGTTCAGGACTTT...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGIKHLG*LLNQVT
Trigger: AGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR GCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGGTGTGTACACATCCATaGACTTGGGGCAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLVCTHP*TWGSRA
Trigger: AGCTCTACTGCCCCAAGTGCATGGATGTGTACACAC...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGTCAATCAGGTCACTCTaGTTGGGGTTGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVSIRSL*LGLSSS
Trigger: ACTGGAAGACAACCCCAACCAGAGTGACCTGATTGA...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGTACTTTTCCAACATCTaGGCGATGCCACGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLYFSNI*AMPRLV
Trigger: TACCAACCGTGGCATCGCCCAGATGTTGGAAAAGTA...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACGCCAATGGGAAGCATTaGCTGGTTCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYANGKH*LVLTVH
Trigger: GTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGC...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGGCCAATGGGAAGCATTaGCTGGTTCTCACAGTACAC +
Preference number: 4 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVANGKH*LVLTVH
Trigger: GTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGC...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTCTGAAAGGCCAATaGGAAGCATTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRCLKGQ*EALAGS
Trigger: AGAACCAGCCAATGCTTCCCATTGGCCTTTCAGACA...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGTGTCTGAAAGGCCAATaGGAAGCATTGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLCLKGQ*EALAGS
Trigger: AGAACCAGCCAATGCTTCCCATTGGCCTTTCAGACA...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQSRASP*LHLGCL
Trigger: CAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACT...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGACACATCCATGCACTTaGGGCAGTAGAGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLTHPCT*GSRASP
Trigger: TGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACGTCAAGAGTCCAGCCTaGGGAAGAACCAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYVKSPA*GRTKSP
Trigger: AGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGGTCAAGAGTCCAGCCTaGGGAAGAACCAAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVVKSPA*GRTKSP
Trigger: AGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGAAGATATTTGCACTGTaGAATTCAGGAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAKIFAL*NSGRVR
Trigger: CCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGTGGGTCTTAGAGACATaGACAAGACAGGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVWVLET*TRQGKQ
Trigger: CTGTTTCCCCTGTCTTGTCCATGTCTCTAAGACCCA...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAAGTTCAGTCTGGTACTaGGTCTTAGAGACATGGACA +
Preference number: 4 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLESSVWY*VLETWT
Trigger: TGTCCATGTCTCTAAGACCCAGTACCAGACTGAACT...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGTTCAGTCTGGTACTaGGTCTTAGAGACATGGACA +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGSSVWY*VLETWT
Trigger: TGTCCATGTCTCTAAGACCCAGTACCAGACTGAACT...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGGCTGCTAGTTCAGTCTaGTACTGGGTCTTAGAGACA +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKAASSV*YWVLET
Trigger: TGTCTCTAAGACCCAGTACCAGACTGAACTAGCAGC...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGAGTCCCAGTTTATTGTaGAGGAAAATGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRSPSLL*RKMGDM
Trigger: CATGTCCCCCATTTTCCTCCACAATAAACTGGGACT...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGTCCCAGTTTATTGTaGAGGAAAATGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGSPSLL*RKMGDM
Trigger: CATGTCCCCCATTTTCCTCCACAATAAACTGGGACT...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGACATCATAATAGATGGTaGTCACCATGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGHHNRW*SPCTGM
Trigger: CATCCCTGTGCATGGTGATCACCATCTATTATGATG...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCCCTAAGAAATCACAGTaGCCAAAGAATGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSPKKSQ*PKNVGV
Trigger: AACACCCACATTCTTTGGTCACTGTGATTTCTTAGG...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR GCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLIKHLG*LLNQVT
Trigger: AGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTAT...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAATCAGGTCACTCTaGTTGGGGTTGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVSIRSL*LGLSSS
Trigger: ACTGGAAGACAACCCCAACCAGAGTGACCTGATTGA...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTACTTTTCCAACATCTaGGCGATGCCACGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVYFSNI*AMPRLV
Trigger: TACCAACCGTGGCATCGCCCAGATGTTGGAAAAGTA...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTACTTTTCCAACATCTaGGCGATGCCACGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLYFSNI*AMPRLV
Trigger: TACCAACCGTGGCATCGCCCAGATGTTGGAAAAGTA...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 4 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGATGGGAAGCATTGGCTaGTTCTCACAGTACACACGA +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLMGSIG*FSQYTR
Trigger: TCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCAT...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 4 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GTACACACGAGGACAGTAACCAAAGTCTCCTTGCTGGTACTTTTCCAACATCTGGGTGTCTTGATGACTTaGGTGTGTACACATCCATGC +
Preference number: 4 (lower is better)
Translates to: VHTRTVTKVSLLVLFQHLGVLMT*VCTHPC
Trigger: GCATGGATGTGTACACACCCAAGTCATCAAGACACC...CAGATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTACTGTCCTCGTGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CCA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGAAGATATTTGCACTGTaGAATTCAGGAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRKIFAL*NSGRVR
Trigger: CCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAAGATATTTGCACTGTaGAATTCAGGAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGKIFAL*NSGRVR
Trigger: CCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAAAGATATTTGCACTGTaGAATTCAGGAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AFFLAAVGNVLSTASNDEKIFAL*NSGRVR
Trigger: CCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATAAGATATTTGCACTGTaGAATTCAGGAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYKIFAL*NSGRVR
Trigger: CCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACTGGGTCTTAGAGACATaGACAAGACAGGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYWVLET*TRQGKQ
Trigger: CTGTTTCCCCTGTCTTGTCCATGTCTCTAAGACCCA...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGAGTTCAGTCTGGTACTaGGTCTTAGAGACATGGACA +
Preference number: 4 (lower is better)
Translates to: KIFALWNSGRVRCQESSLSSVWY*VLETWT
Trigger: TGTCCATGTCTCTAAGACCCAGTACCAGACTGAACT...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGAGTCCCAGTTTATTGTaGAGGAAAATGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVSPSLL*RKMGDM
Trigger: CATGTCCCCCATTTTCCTCCACAATAAACTGGGACT...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACCATCATAATAGATGGTaGTCACCATGCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYHHNRW*SPCTGM
Trigger: CATCCCTGTGCATGGTGATCACCATCTATTATGATG...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGAAAGTCCTGAACTATTaGGGAACAAGTACATGCGGC +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLKVLNY*GTSTCG
Trigger: GCCGCATGTACTTGTTCCTCAATAGTTCAGGACTTT...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGAAAGTCCTGAACTATTaGGGAACAAGTACATGCGGC +
Preference number: 4 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVKVLNY*GTSTCG
Trigger: GCCGCATGTACTTGTTCCTCAATAGTTCAGGACTTT...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR TCA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGCCTAAGAAATCACAGTaGCCAAAGAATGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKPKKSQ*PKNVGV
Trigger: AACACCCACATTCTTTGGTCACTGTGATTTCTTAGG...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGCCTAAGAAATCACAGTaGCCAAAGAATGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRPKKSQ*PKNVGV
Trigger: AACACCCACATTCTTTGGTCACTGTGATTTCTTAGG...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGAAGATATTTGCACTGTaGAATTCAGGAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRDMDKTGETELDVNRQVKIFAL*NSGRVR
Trigger: CCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CCA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGAGTTCAGTCTGGTACTaGGTCTTAGAGACATGGACA +
Preference number: 4 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLSSVWY*VLETWT
Trigger: TGTCCATGTCTCTAAGACCCAGTACCAGACTGAACT...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR TCA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACCCTAAGAAATCACAGTaGCCAAAGAATGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYPKKSQ*PKNVGV
Trigger: AACACCCACATTCTTTGGTCACTGTGATTTCTTAGG...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS CCA 90 bp CTGCTCATCTTCACGTCAGCGGCTGGACGGGGACCAGGACTGGGGTaGGGTAGGGAAGTTGCTACTTCCAGGGAACGGCGGCGACCGCTA +
Preference number: 5 (lower is better)
Translates to: LLIFTSAAGRGPGLG*GREVATSRERRRPL
Trigger: TAGCGGTCGCCGCCGTTCCCTGGAAGTAGCAACTTCCCTACCCCACCCCAGTCCTGGTCCCCGTCCAGCCGCTGACGTGAAGATGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 50 transcripts:
ENST00000375882.7
ENST00000383431.6
ENST00000383433.8
ENST00000413083.5
ENST00000416194.5
ENST00000422567.6
ENST00000437010.5
ENST00000443673.6
ENST00000451917.6
ENST00000452985.6
ENST00000454382.6
ENST00000460765.5
ENST00000461323.5
ENST00000464220.1
ENST00000464582.5
ENST00000465367.5
ENST00000465481.6
ENST00000465631.5
ENST00000468132.1
ENST00000468255.5
ENST00000469352.5
ENST00000471828.5
ENST00000475875.2
ENST00000476022.1
ENST00000476055.5
ENST00000476407.5
ENST00000476584.5
ENST00000480866.1
ENST00000481269.1
ENST00000481308.5
ENST00000485003.1
ENST00000485658.5
ENST00000486289.5
ENST00000488020.1
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
ENST00000497836.5
ENST00000550832.2
ENST00000611721.4
ENST00000612713.3
ENST00000613998.1
ENST00000614783.4
ENST00000615589.2
ENST00000615772.4
ENST00000617578.4
ENST00000619468.4
ENST00000621623.4
ENST00000621953.2
CDS-3UTR CAA 90 bp CGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: RIVLTGLLKLLAAWSCSWWLAGL*GRYSGC
Trigger: GCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCA...CCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GAGCTGCAGCTGGTAGGCCATCGGATGGATCTTGAAACCGTAGAGCCTGGGCACGAAGTTGCTGGCGGCTaGGAGCTGCAGCTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: ELQLVGHRMDLETVEPGHEVAGG*ELQLVG
Trigger: GCCTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTC...GTGCCCAGGCTCTACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp CAGGACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: QDRWGRESANRLDWALEVWLAGL*GRYSGC
Trigger: GCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCA...AACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp CATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGAAGTTGCTGGCGGCTaGGAGCTGCAGCTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: HEEHVRETSAEVGAIRVMEVAGG*ELQLVG
Trigger: GCCTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTC...CATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GCTGGCGGCTTGGAGCTGCAGCTGGTAGGCCATCGGATGGATCTTGAAACCGTAGTCTTGACTGGGCTCTaGAAGTTGCTGGCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: AGGLELQLVGHRMDLETVVLTGL*KLLAAW
Trigger: CCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGAC...TACGGTTTCAAGATCCATCCGATGGCCTACCAGCTGCAGCTCCAAGCCGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS CCA 90 bp CCGCGGTGGATGCCGGGACACGGAGTCCCCGGTAGAGAAAGAAACTaGCTAAATGAGAGAAAGCGAACTACCAATCCCAGGATGACCCGC +
Preference number: 5 (lower is better)
Translates to: PRWMPGHGVPGRERN*LNERKRTTNPRMTR
Trigger: GCGGGTCATCCTGGGATTGGTAGTTCGCTTTCTCTCATTTAGCCAGTTTCTTTCTCTACCGGGGACTCCGTGTCCCGGCATCCACCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000611721.4
ENST00000612713.3
ENST00000613998.1
ENST00000614783.4
ENST00000615589.2
ENST00000615772.4
ENST00000617578.4
ENST00000619468.4
ENST00000621623.4
ENST00000621953.2
CDS-3UTR CAA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp GCCTGGGCACAAACTGGTTGGCAGGTCTCTTGGGCCGGTACTCGGGATGCACCACCGTGTGATGGTGTCTaGATGACTTGGGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: AWAQTGWQVSWAGTRDAPPCDGV*MTWVCT
Trigger: TGTACACACCCAAGTCATCAAGACACCATCACACGG...TGGTGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTACTGGGCTCTTGAAGTaGCTGGCGGCTTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DRWGRESANRLDWALEVATGLLK*LAAWSC
Trigger: GCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGT...AGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp CAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGTCTTGATGACTTGGGTGTGTACTGGGCTCTTGAAGTaGCTGGCGGCTTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: QCRSRRHPCDGVLMTWVCTGLLK*LAAWSC
Trigger: GCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGT...ACACACCCAAGTCATCAAGACACCATCACACGGATGGCGCCTACTTCGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGGGCAGGGACACAAAATaGCCAAGTCAGGACATCTGC +
Preference number: 5 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRGRDTK*PSQDIC
Trigger: GCAGATGTCCTGACTTGGCAATTTTGTGTCCCTGCC...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAWLAGL*GRYSGC
Trigger: GCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCA...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTCTTGACTGGGCTCTaGAAGTTGCTGGCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: HEEHVRETSAEVGAIRVMVLTGL*KLLAAW
Trigger: CCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGAC...CATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp CGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: RIVLTGLLKLLAAWSCSWIRSLW*GLSSSS
Trigger: AGAACTGGAAGACAACCCCAACCAGAGTGACCTGAT...CCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLWLAGL*GRYSGC
Trigger: GCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCA...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRWLAGL*GRYSGC
Trigger: GCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCA...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYWLAGL*GRYSGC
Trigger: GCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCA...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFWLAGL*GRYSGC
Trigger: GCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCA...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS GCA 90 bp GTCAGACAGAGGCAGGGCGTGGATCAATCCATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACTCTGGTTGGGGTTGTCTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: VRQRQGVDQSIKHLG*LLNQVTLVGVVFQF
Trigger: GAACTGGAAGACAACCCCAACCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTATGGATTGATCCACGCCCTGCCTCTGTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611721.4
ENST00000612713.3
ENST00000613998.1
ENST00000614783.4
ENST00000615772.4
ENST00000621623.4
CDS CCA 90 bp GAGCCTGAAATGCATCCTACAGAAGGGTCTTCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGAACAGGAACTGGGCACAAACTGGTT +
Preference number: 5 (lower is better)
Translates to: EPEMHPTEGSSTRQK*HVRMSGTGTGHKLV
Trigger: AACCAGTTTGTGCCCAGTTCCTGTTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGACCCTTCTGTAGGATGCATTTCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS CCA 90 bp GAGCCTGAAATGCATCCTACAGAAGGGTCTTCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGAACAGGAACAATGGGAAGCATTGGC +
Preference number: 5 (lower is better)
Translates to: EPEMHPTEGSSTRQK*HVRMSGTGTMGSIG
Trigger: GCCAATGCTTCCCATTGTTCCTGTTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGACCCTTCTGTAGGATGCATTTCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615589.2
ENST00000617578.4
ENST00000619468.4
ENST00000621953.2
CDS-3UTR CAA 90 bp AATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: NRLDWALEVAGGLELQLVGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...TACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: DRWGRESANRLDWALEVAGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...AGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp CTCGGGATGCACCATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCTGGTGTCTTGATGACTaGGGTGTGTACACATCCATG +
Preference number: 5 (lower is better)
Translates to: LGMHHEEHVRETSAEVGAWCLDD*GVYTSM
Trigger: CATGGATGTGTACACACCCAAGTCATCAAGACACCA...GGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCACCGTGTGATGGTGTCTaGATGACTTGGGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSPCDGV*MTWVCT
Trigger: TGTACACACCCAAGTCATCAAGACACCATCACACGG...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKWLAGL*GRYSGC
Trigger: GCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCA...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTCGGGATGCACCATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCAATCAGCGAATCGTCTaGACTGGGCTCTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LGMHHEEHVRETSAEVGANQRIV*TGLLKL
Trigger: CAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATT...GGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGAATCAGCGAATCGTCTaGACTGGGCTCTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: ANRLDWALEVAGGLELQLNQRIV*TGLLKL
Trigger: CAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATT...CAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGATTCTGCTCGTCCCTTaGCACTTCTCCATTTCCCCT +
Preference number: 5 (lower is better)
Translates to: EEHVRETSAEVGAIRVMVILLVP*HFSISP
Trigger: AGGGGAAATGGAGAAGTGCAAAGGGACGAGCAGAAT...CACCATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTGTAATCCCGGCACTTaGGGAGGTCGAGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFCNPGT*GGRGGQ
Trigger: CTGCCCTCCTCGACCTCCCAAAGTGCCGGGATTACA...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACGCCTCCTCGTCCTTCTaGCTGCTAGTTCAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: AAVGNVLSTASNDEANLDASSSF*LLVQSG
Trigger: ACCAGACTGAACTAGCAGCAAGAAGGACGAGGAGGC...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS GCA 90 bp GGTAAGGATGTAGCGGGCGTGGATCAATCCATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACTCTGGTTGGGGTTGTCTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GKDVAGVDQSIKHLG*LLNQVTLVGVVFQF
Trigger: GAACTGGAAGACAACCCCAACCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTATGGATTGATCCACGCCCGCTACATCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 65 transcripts:
ENST00000375865.6
ENST00000375866.2
ENST00000375882.7
ENST00000375885.8
ENST00000383427.6
ENST00000383431.6
ENST00000383433.8
ENST00000400110.5
ENST00000400116.7
ENST00000412802.5
ENST00000413083.5
ENST00000416194.5
ENST00000418230.5
ENST00000422261.6
ENST00000422567.6
ENST00000424502.6
ENST00000428483.6
ENST00000429633.5
ENST00000431476.5
ENST00000432290.6
ENST00000436169.5
ENST00000437010.5
ENST00000439572.6
ENST00000443673.6
ENST00000448596.1
ENST00000451917.6
ENST00000452985.6
ENST00000453234.5
ENST00000454382.6
ENST00000454511.5
ENST00000455161.1
ENST00000458330.5
ENST00000460765.5
ENST00000461323.5
ENST00000464220.1
ENST00000465367.5
ENST00000465481.6
ENST00000465631.5
ENST00000468132.1
ENST00000468255.5
ENST00000471828.5
ENST00000475875.2
ENST00000476022.1
ENST00000476407.5
ENST00000480866.1
ENST00000481269.1
ENST00000481308.5
ENST00000485003.1
ENST00000486289.5
ENST00000488020.1
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
ENST00000614974.4
ENST00000615589.2
ENST00000617578.4
ENST00000619468.4
ENST00000620798.3
ENST00000621203.1
ENST00000621953.2
ENST00000622139.3
ENST00000677388.1
ENST00000677536.1
ENST00000677758.1
CDS GCA 90 bp TCCAACATCTGGGCATGGGACCCAGAAACCTGGGCTTCTGACCCTTaGATCAAACGAAGACAGCTCTGCCTTCCCTTCACACCTTTTCAG +
Preference number: 5 (lower is better)
Translates to: SNIWAWDPETWASDP*IKRRQLCLPFTPFQ
Trigger: CTGAAAAGGTGTGAAGGGAAGGCAGAGCTGTCTTCGTTTGATGCAAGGGTCAGAAGCCCAGGTTTCTGGGTCCCATGCCCAGATGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465481.6
ENST00000475875.2
CDS-3UTR CAA 90 bp GATCTTGAAACCGTAGAGCCTGGGCACAAACTGGTTGGCAGGTCTCTTGGGCCGTCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: DLETVEPGHKLVGRSLGPSLWLG*SSSSSS
Trigger: TGATGAAGAACTGGAAGACAACCCCAACCAGAGTGA...CGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGGCTCTACGGTTTCAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677758.1
CDS-3UTR CAA 90 bp AATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: NRLDWALEVAGGLELQLVIRSLW*GLSSSS
Trigger: AGAACTGGAAGACAACCCCAACCAGAGTGACCTGAT...TACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp AGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGGTGTCTGGTGTCTTGATGACTaGGGTGTGTACACATCCATG +
Preference number: 5 (lower is better)
Translates to: RACEGNQCRSRRHPCDGVWCLDD*GVYTSM
Trigger: CATGGATGTGTACACACCCAAGTCATCAAGACACCA...GACACCATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQWLAGL*GRYSGC
Trigger: GCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCA...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GACAGGTGGGGGAGGGAATCAGCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTATTCTGCTCGTCCCTTaGCACTTCTCCATTTCCCCT +
Preference number: 5 (lower is better)
Translates to: DRWGRESANRLDWALEVAILLVP*HFSISP
Trigger: AGGGGAAATGGAGAAGTGCAAAGGGACGAGCAGAAT...AGCAACTTCAAGAGCCCAGTCAAGACGATTCGCTGATTCCCTCCCCCACCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677388.1
ENST00000677758.1
CDS-3UTR CAA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTGTAATCCCGGCACTTaGGGAGGTCGAGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKCNPGT*GGRGGQ
Trigger: CTGCCCTCCTCGACCTCCCAAAGTGCCGGGATTACA...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp GCGAATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAATGC +
Preference number: 5 (lower is better)
Translates to: ANRLDWALEVAGGLELQLVTKVS*LVLFQC
Trigger: GCATTGGAAAAGTACCAGCAAGGAGACTTTGGTTAC...CAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677758.1
CDS TCA 90 bp CTCAATCAGGTCACTCTGGTTGGGGTTGTCTTCCAGTTCTTCATCTaGAACACAGCCCGGCCAAATGCAACAGGCTCCAGGTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: LNQVTLVGVVFQFFI*NTARPNATGSRSKI
Trigger: GATCTTGGACCTGGAGCCTGTTGCATTTGGCCGGGCTGTGTTTCAGATGAAGAACTGGAAGACAACCCCAACCAGAGTGACCTGATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CAA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 5 (lower is better)
Translates to: AAVGNVLSTASNDEANLDSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGCCTCCTCGTCCTTCTaGCTGCTAGTTCAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSASSSF*LLVQSG
Trigger: ACCAGACTGAACTAGCAGCAAGAAGGACGAGGAGGC...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCCTCCTCGTCCTTCTaGCTGCTAGTTCAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: AFFLAAVGNVLSTASNDEASSSF*LLVQSG
Trigger: ACCAGACTGAACTAGCAGCAAGAAGGACGAGGAGGC...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGGCAGGGACACAAAATaGCCAAGTCAGGACATCTGC +
Preference number: 5 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAGRDTK*PSQDIC
Trigger: GCAGATGTCCTGACTTGGCAATTTTGTGTCCCTGCC...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp CATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTAGGCGCCATCCGTGTGATGTCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: HEEHVRETSAEVGAIRVMSLWLG*SSSSSS
Trigger: AGATGAAGAACTGGAAGACAACCCCAACCAGAGTGA...CATCACACGGATGGCGCCTACTTCGGCACTGGTTTCCCTCACATGCTCTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS GCA 90 bp GCAAGTAGGGAGGTTGAAGAGAACTCACTTCACAGAAGAATTCATTaGCACGGAGCCCACAGAACCAGGAAATCCAGGACACCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: ASREVEENSLHRRIH*HGAHRTRKSRTPPL
Trigger: CAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTGAAGTGAGTTCTCTTCAACCTCCCTACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475875.2
ENST00000550832.2
CDS CCA 90 bp GACTGCCACACGGTGCTTTCCTTTCCCTTCTTCAACACTCACCAATaGGAAGCATTGGCTGGTTCTCACAGTACACACGAGGACAGTAAC +
Preference number: 5 (lower is better)
Translates to: DCHTVLSFPFFNTHQ*EALAGSHSTHEDSN
Trigger: GTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGTGAGTGTTGAAGAAGGGAAAGGAAAGCACCGTGTGGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000460765.5
ENST00000461323.5
ENST00000465367.5
ENST00000465631.5
ENST00000468255.5
ENST00000471828.5
ENST00000476407.5
ENST00000481269.1
ENST00000481308.5
ENST00000486289.5
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
CDS CCA 90 bp TGTGATGGTGTCTTGATGACTTGGGTGTGTACACATCCATGCACTTaGGGCAGTAGAGCTTCACCATGGCTTCACCTGGGATGTCAATGG +
Preference number: 5 (lower is better)
Translates to: CDGVLMTWVCTHPCT*GSRASPWLHLGCQW
Trigger: CCATTGACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGTACACACCCAAGTCATCAAGACACCATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677536.1
CDS-3UTR CAA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGTCACAGAAGAATTCATaGCCACGGAGCCCACAGAAC +
Preference number: 5 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAASQKNS*PRSPQN
Trigger: GTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTGA...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAIRSLW*GLSSSS
Trigger: AGAACTGGAAGACAACCCCAACCAGAGTGACCTGAT...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGTGGTGTCTTGATGACTaGGGTGTGTACACATCCATG +
Preference number: 5 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKWCLDD*GVYTSM
Trigger: CATGGATGTGTACACACCCAAGTCATCAAGACACCA...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGCCGTGTGATGGTGTCTaGATGACTTGGGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAPCDGV*MTWVCT
Trigger: TGTACACACCCAAGTCATCAAGACACCATCACACGG...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 5 (lower is better)
Translates to: AAVGNVLSTASNDEANLDGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 5 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAASGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GCAAAAGACAAGCCCAGGTTCAGGGACAGTGTGACCATGGGGTCCAGGCCATCAAAAAGTCCTGAACTATaGAGGAACAAGTACATGCGG +
Preference number: 5 (lower is better)
Translates to: AKDKPRFRDSVTMGSRPSKSPEL*RNKYMR
Trigger: CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTT...TGATGGCCTGGACCCCATGGTCACACTGTCCCTGAACCTGGGCTTGTCTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GGACATGGAGCTGAGCAGAACAGACCCTTCCCTCTCCTCTCACAGGCCCCTAGGGTTACAGAAAGATATTaGCACTGTGGAATTCAGGAA +
Preference number: 5 (lower is better)
Translates to: GHGAEQNRPFPLLSQAPRVTERY*HCGIQE
Trigger: TTCCTGAATTCCACAGTGCAAATATCTTTCTGTAAC...CCTAGGGGCCTGTGAGAGGAGAGGGAAGGGTCTGTTCTGCTCAGCTCCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAGGCAGGGACACAAAATaGCCAAGTCAGGACATCTGC +
Preference number: 5 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEGRDTK*PSQDIC
Trigger: GCAGATGTCCTGACTTGGCAATTTTGTGTCCCTGCC...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS CCA 90 bp CGGTGCTTTCCTTTCCCTTCTTCAACACTCACCAATGGGAAGCATTaGCTGGTTCTCACAGTACACACGAGGACAGTAACCAAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: RCFPFPSSTLTNGKH*LVLTVHTRTVTKVS
Trigger: GGAGACTTTGGTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGTGAGTGTTGAAGAAGGGAAAGGAAAGCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000460765.5
ENST00000461323.5
ENST00000465367.5
ENST00000465631.5
ENST00000468255.5
ENST00000471828.5
ENST00000476407.5
ENST00000481269.1
ENST00000481308.5
ENST00000486289.5
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
CDS-3UTR CAA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTCACAGAAGAATTCATaGCCACGGAGCCCACAGAAC +
Preference number: 5 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYSQKNS*PRSPQN
Trigger: GTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTGA...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCTCACAGAAGAATTCATaGCCACGGAGCCCACAGAAC +
Preference number: 5 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGSQKNS*PRSPQN
Trigger: GTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTGA...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGTCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAASLWLG*SSSSSS
Trigger: TGATGAAGAACTGGAAGACAACCCCAACCAGAGTGA...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYIRSLW*GLSSSS
Trigger: AGAACTGGAAGACAACCCCAACCAGAGTGACCTGAT...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRIRSLW*GLSSSS
Trigger: AGAACTGGAAGACAACCCCAACCAGAGTGACCTGAT...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: AFFLAAVGNVLSTASNDEIRSLW*GLSSSS
Trigger: AGAACTGGAAGACAACCCCAACCAGAGTGACCTGAT...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AATCGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAACAT +
Preference number: 5 (lower is better)
Translates to: NRLDWALEVAGGLELQLVVTKVS*LVLFQH
Trigger: ATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTAC...TACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS-3UTR CAA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: KIFALWNSGRVRCQESSLGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGTGGTGTCTTGATGACTaGGGTGTGTACACATCCATG +
Preference number: 5 (lower is better)
Translates to: LGLIPVLCKVGVAFFLAAWCLDD*GVYTSM
Trigger: CATGGATGTGTACACACCCAAGTCATCAAGACACCA...CGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACCGTGTGATGGTGTCTaGATGACTTGGGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEPCDGV*MTWVCT
Trigger: TGTACACACCCAAGTCATCAAGACACCATCACACGG...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATCCGTGTGATGGTGTCTaGATGACTTGGGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYPCDGV*MTWVCT
Trigger: TGTACACACCCAAGTCATCAAGACACCATCACACGG...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGCCGTGTGATGGTGTCTaGATGACTTGGGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRPCDGV*MTWVCT
Trigger: TGTACACACCCAAGTCATCAAGACACCATCACACGG...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCCCGTGTGATGGTGTCTaGATGACTTGGGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSPCDGV*MTWVCT
Trigger: TGTACACACCCAAGTCATCAAGACACCATCACACGG...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCCCGTGTGATGGTGTCTaGATGACTTGGGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGPCDGV*MTWVCT
Trigger: TGTACACACCCAAGTCATCAAGACACCATCACACGG...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 5 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 5 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAATCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 5 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLESGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGGCCTCCTCGTCCTTCTaGCTGCTAGTTCAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLASSSF*LLVQSG
Trigger: ACCAGACTGAACTAGCAGCAAGAAGGACGAGGAGGC...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGGGCAGGGACACAAAATaGCCAAGTCAGGACATCTGC +
Preference number: 5 (lower is better)
Translates to: MDKTGETELDVNRQVTGLGRDTK*PSQDIC
Trigger: GCAGATGTCCTGACTTGGCAATTTTGTGTCCCTGCC...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGTCACAGAAGAATTCATaGCCACGGAGCCCACAGAAC +
Preference number: 5 (lower is better)
Translates to: MDKTGETELDVNRQVTGLSQKNS*PRSPQN
Trigger: GTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTGA...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAATCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: AFFLAAVGNVLSTASNDESLWLG*SSSSSS
Trigger: TGATGAAGAACTGGAAGACAACCCCAACCAGAGTGA...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: LTALGLIPVLCKVGVAFFSLWLG*SSSSSS
Trigger: TGATGAAGAACTGGAAGACAACCCCAACCAGAGTGA...GAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYSLWLG*SSSSSS
Trigger: TGATGAAGAACTGGAAGACAACCCCAACCAGAGTGA...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRIRSLW*GLSSSS
Trigger: AGAACTGGAAGACAACCCCAACCAGAGTGACCTGAT...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAACAT +
Preference number: 5 (lower is better)
Translates to: AAVGNVLSTASNDEANLDVTKVS*LVLFQH
Trigger: ATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTAC...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGAGGGTGTTACAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGGGCCAATGGGAAGCATaGGCTGGTTCTCACAGTACA +
Preference number: 5 (lower is better)
Translates to: LRVLQKDICTVEFRKGEVGQWEA*AGSHST
Trigger: TGTACTGTGAGAACCAGCCAATGCTTCCCATTGGCC...CACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTGTAACACCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAATGGTGTCTTGATGACTaGGGTGTGTACACATCCATG +
Preference number: 5 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEWCLDD*GVYTSM
Trigger: CATGGATGTGTACACACCCAAGTCATCAAGACACCA...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGGGTGAGGTGTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGGTGTCTTGATGACTaGGGTGTGTACACATCCATG +
Preference number: 5 (lower is better)
Translates to: KGEVSRVQPGEEPKVLNYWCLDD*GVYTSM
Trigger: CATGGATGTGTACACACCCAAGTCATCAAGACACCA...ATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGACACCTCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGTGGTGTCTTGATGACTaGGGTGTGTACACATCCATG +
Preference number: 5 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRWCLDD*GVYTSM
Trigger: CATGGATGTGTACACACCCAAGTCATCAAGACACCA...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 5 (lower is better)
Translates to: AFFLAAVGNVLSTASNDEGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...TTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 5 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp ACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 5 (lower is better)
Translates to: TGPDTSTLQSRCCVFLGSGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...GCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGATCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 5 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGTCTGGAGTTGGGGGCTaGACCAGGAGTTGCAATAAT +
Preference number: 5 (lower is better)
Translates to: KIFALWNSGRVRCQESSLSGVGG*TRSCNN
Trigger: ATTATTGCAACTCCTGGTCAAGCCCCCAACTCCAGA...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACAAAAGTCCTGAACTATaGAGGAACAAGTACATGCGG +
Preference number: 5 (lower is better)
Translates to: AAVGNVLSTASNDEANLDKSPEL*RNKYMR
Trigger: CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTT...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GGTGACTGGATTGAGAGGGATGGGGGATACTGGAACACTCAGATGATGGGGAAGAAAAGTCCTGAACTATaGAGGAACAAGTACATGCGG +
Preference number: 5 (lower is better)
Translates to: GDWIERDGGYWNTQMMGKKSPEL*RNKYMR
Trigger: CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTT...CTTCCCCATCATCTGAGTGTTCCAGTATCCCCCATCCCTCTCAATCCAGTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS GCA 90 bp TTCTCAGCTAGCTTCCTTAAACAGGGCTTAAACATGACTTCTTGCTaGAGGAACCTGTGTCTCTTACTGCTCAGAAGGAGGCAGGTAGGA +
Preference number: 5 (lower is better)
Translates to: FSASFLKQGLNMTSC*RNLCLLLLRRRQVG
Trigger: TCCTACCTGCCTCCTTCTGAGCAGTAAGAGACACAGGTTCCTGCAGCAAGAAGTCATGTTTAAGCCCTGTTTAAGGAAGCTAGCTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000465481.6
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
ENST00000493079.5
CDS GCA 90 bp CTCTTCTCAGCTAGCTTCCTTAAACAGGGCTTAAACATGACTTCTTaGTGCAGGAACCTGTGTCTCTTACTGCTCAGAAGGAGGCAGGTA +
Preference number: 5 (lower is better)
Translates to: LFSASFLKQGLNMTS*CRNLCLLLLRRRQV
Trigger: TACCTGCCTCCTTCTGAGCAGTAAGAGACACAGGTTCCTGCAGCAAGAAGTCATGTTTAAGCCCTGTTTAAGGAAGCTAGCTGAGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000465481.6
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
ENST00000493079.5
CDS-3UTR CAA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCACAGAAGAATTCATaGCCACGGAGCCCACAGAAC +
Preference number: 5 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLSQKNS*PRSPQN
Trigger: GTTCTGTGGGCTCCGTGGCAATGAATTCTTCTGTGA...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGATCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGSLWLG*SSSSSS
Trigger: TGATGAAGAACTGGAAGACAACCCCAACCAGAGTGA...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp ATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGACTGGATTGTCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: MDKTGETELDVNRQVTGLSLWLG*SSSSSS
Trigger: TGATGAAGAACTGGAAGACAACCCCAACCAGAGTGA...CAATCCAGTCACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYIRSLW*GLSSSS
Trigger: AGAACTGGAAGACAACCCCAACCAGAGTGACCTGAT...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQIRSLW*GLSSSS
Trigger: AGAACTGGAAGACAACCCCAACCAGAGTGACCTGAT...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACCCGTGTGATGGTGTCTaGATGACTTGGGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYPCDGV*MTWVCT
Trigger: TGTACACACCCAAGTCATCAAGACACCATCACACGG...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 5 (lower is better)
Translates to: LRDMDKTGETELDVNRQVGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 5 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GTCAAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGGGTGTTGCGTTTTTCTaGGCAGCGGTAGGAAATGTA +
Preference number: 5 (lower is better)
Translates to: VKSPAWGRTKSPELLRNKGVAFF*AAVGNV
Trigger: TACATTTCCTACCGCTGCCAAGAAAAACGCAACACC...CTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS TCA 90 bp CTCAATCAGGTCACTCTGGTTGGGGTTGTCTTCCAGTTCTTCATCTaGAACACAGCCCGGCCAAATGCAACTACTTGTTTTTCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LNQVTLVGVVFQFFI*NTARPNATTCFSAF
Trigger: GAAAGCTGAAAAACAAGTAGTTGCATTTGGCCGGGCTGTGTTTCAGATGAAGAACTGGAAGACAACCCCAACCAGAGTGACCTGATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465481.6
ENST00000475875.2
CDS-3UTR CAA 90 bp GTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: VLCKVGVAFFLAAVGNVLSLWLG*SSSSSS
Trigger: TGATGAAGAACTGGAAGACAACCCCAACCAGAGTGA...CAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGTGGTGTCTTGATGACTaGGGTGTGTACACATCCATG +
Preference number: 5 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQWCLDD*GVYTSM
Trigger: CATGGATGTGTACACACCCAAGTCATCAAGACACCA...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp ACCAGGAGTTGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGAAAAGTCCTGAACTATaGAGGAACAAGTACATGCGG +
Preference number: 5 (lower is better)
Translates to: TRSCNNRTDSTGPDTSTLKSPEL*RNKYMR
Trigger: CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTT...CAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCAACTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACATGCGGAAAAGTCCTGAACTATaGAGGAACAAGTACATGCGG +
Preference number: 5 (lower is better)
Translates to: PAWGRTKSPELLRNKYMRKSPEL*RNKYMR
Trigger: CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTT...CCGCATGTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAACGATGAAGCGAACCTTGACGTTACAGAAAGATATTaGCACTGTGGAATTCAGGAA +
Preference number: 5 (lower is better)
Translates to: AAVGNVLSTASNDEANLDVTERY*HCGIQE
Trigger: TTCCTGAATTCCACAGTGCAAATATCTTTCTGTAAC...GTCAAGGTTCGCTTCATCGTTCGAGGCTGTGGACAGTACATTTCCTACCGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS TCA 90 bp AGGACAGTAACCAAAGTCTCCTTGCTGGTACTTTTCCAACTGAGGTaGATACAATGGAAGGGGTTGGCAGGTAGATGTAAAGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: RTVTKVSLLVLFQLR*IQWKGLAGRCKEEA
Trigger: TGCCTCTTCTTTACATCTACCTGCCAACCCCTTCCATTGTATTCACCTCAGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTACTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
ENST00000493079.5
CDS-3UTR CAA 90 bp CTTAGAGACATGGACAAGACAGGGGAAACAGAGCTAGATGTCAATAGGCAGGTGGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAACAT +
Preference number: 5 (lower is better)
Translates to: LRDMDKTGETELDVNRQVVTKVS*LVLFQH
Trigger: ATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTAC...CACCTGCCTATTGACATCTAGCTCTGTTTCCCCTGTCTTGTCCATGTCTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
CDS-3UTR CAA 90 bp AAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGCCTGGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAACAT +
Preference number: 5 (lower is better)
Translates to: KIFALWNSGRVRCQESSLVTKVS*LVLFQH
Trigger: ATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTAC...CAGGCTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp TGCAATAATCGTACTGACAGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAACAT +
Preference number: 5 (lower is better)
Translates to: CNNRTDSTGPDTSTLQSRVTKVS*LVLFQH
Trigger: ATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTAC...CCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCTGTCAGTACGATTATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS TCA 90 bp ATTAGGCAGGCTACAAACCATCAGAGCCATTTGTTGTTTGTTCCTTaGGGAAGAGGCAGTCTATCACAACTCTCTGATTCAAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: IRQATNHQSHLLFVP*GRGSLSQLSDSRSV
Trigger: GACAGACCTTGAATCAGAGAGTTGTGATAGACTGCCTCTTCCTCAAGGAACAAACAACAAATGGCTCTGATGGTTTGTAGCCTGCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
ENST00000493079.5
CDS-3UTR CAA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAACAT +
Preference number: 5 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQVTKVS*LVLFQH
Trigger: ATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTAC...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AAGAGTCCAGCCTGGGGAAGAACCAAAAGTCCTGAACTATTGAGGAACAAGTACGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAACAT +
Preference number: 5 (lower is better)
Translates to: KSPAWGRTKSPELLRNKYVTKVS*LVLFQH
Trigger: ATGTTGGAAAAGTACCAGCAAGGAGACTTTGGTTAC...GTACTTGTTCCTCAATAGTTCAGGACTTTTGGTTCTTCCCCAGGCTGGACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAAATGTACTGTCCACAGCCTCGAAGTTACAGAAAGATATTaGCACTGTGGAATTCAGGAA +
Preference number: 5 (lower is better)
Translates to: RCCVFLGSGRKCTVHSLEVTERY*HCGIQE
Trigger: TTCCTGAATTCCACAGTGCAAATATCTTTCTGTAAC...TTCGAGGCTGTGGACAGTACATTTCCTACCGCTGCCAAGAAAAACGCAACACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp AGCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCGTTACAGAAAGATATTaGCACTGTGGAATTCAGGAA +
Preference number: 5 (lower is better)
Translates to: STGPDTSTLQSRCCVFLGVTERY*HCGIQE
Trigger: TTCCTGAATTCCACAGTGCAAATATCTTTCTGTAAC...GCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp GCACTGGGCCTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGTTACAGAAAGATATTaGCACTGTGGAATTCAGGAA +
Preference number: 5 (lower is better)
Translates to: ALGLIPVLCKVGVAFFLAVTERY*HCGIQE
Trigger: TTCCTGAATTCCACAGTGCAAATATCTTTCTGTAAC...TGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAGGCCCAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS TCA 90 bp AGGACATGGAAGCCAAGAGGGAACCCATATCAAAATCCTCATCTTTaGCCTGGGCAAAATGCTCTAAGTGATGCCTTATCATCAACACAA +
Preference number: 5 (lower is better)
Translates to: RTWKPRGNPYQNPHL*PGQNALSDALSSTQ
Trigger: TTGTGTTGATGATAAGGCATCACTTAGAGCATTTTGCCCAGGTCAAAGATGAGGATTTTGATATGGGTTCCCTCTTGGCTTCCATGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475875.2
CDS-3UTR CAA 90 bp CTGATACCAGTACTCTGCAAAGTAGGTGTTGCGTTTTTCTTGGCAGCGGTAGGAGTTACAGAAAGATATTaGCACTGTGGAATTCAGGAA +
Preference number: 5 (lower is better)
Translates to: LIPVLCKVGVAFFLAAVGVTERY*HCGIQE
Trigger: TTCCTGAATTCCACAGTGCAAATATCTTTCTGTAAC...TCCTACCGCTGCCAAGAAAAACGCAACACCTACTTTGCAGAGTACTGGTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS-3UTR CAA 90 bp CAGAAAGATATTTGCACTGTGGAATTCAGGAAGGGTGAGGTGTCAAGAGTCCAGGTTACAGAAAGATATTaGCACTGTGGAATTCAGGAA +
Preference number: 5 (lower is better)
Translates to: QKDICTVEFRKGEVSRVQVTERY*HCGIQE
Trigger: TTCCTGAATTCCACAGTGCAAATATCTTTCTGTAAC...CTGGACTCTTGACACCTCACCCTTCCTGAATTCCACAGTGCAAATATCTTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS TCA 90 bp CCCATATCAAAATCCTCATCTTTGACCTGGGCAAAATGCTCTAAGTaGTGCCTTATCATCAACACAACTGCATCTGTTGTGCTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PISKSSSLTWAKCSK*CLIINTTASVVLVS
Trigger: AGAAACAAGCACAACAGATGCAGTTGTGTTGATGATAAGGCATCACTTAGAGCATTTTGCCCAGGTCAAAGATGAGGATTTTGATATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475875.2
CDS CCA 72 bp GCGAACTACCAATCCCAGGATGACCCGCGCACGACCTaGCTGTCACGAAGGCCCGGAGGAGGGCGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: ANYQSQDDPRTT*LSRRPGGGRLR
Trigger: CCGCAAGCGCCCTCCTCCGGGCCTTCGTGACAGCCAGGTCGTGCGCGGGTCATCCTGGGATTGGTAGTTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000611721.4
ENST00000612713.3
ENST00000613998.1
ENST00000614783.4
ENST00000615589.2
ENST00000615772.4
ENST00000617578.4
ENST00000619468.4
ENST00000621623.4
ENST00000621953.2
CDS GCA 72 bp AACACGCAAGCGCCAAGGGTCAGGTGCCGCGGTGGATaGCGGGACACGGAGTCCCCGGTAGAGAAAGAAACT +
Preference number: 6 (lower is better)
Translates to: NTQAPRVRCRGG*RDTESPVEKET
Trigger: AGTTTCTTTCTCTACCGGGGACTCCGTGTCCCGGCATCCACCGCGGCACCTGACCCTTGGCGCTTGCGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000611721.4
ENST00000612713.3
ENST00000613998.1
ENST00000614783.4
ENST00000615589.2
ENST00000615772.4
ENST00000617578.4
ENST00000619468.4
ENST00000621623.4
ENST00000621953.2
CDS TCA 72 bp GAGCCCACAGAACCAGGAAATCCAGGACACCTCCTCTaGGCTGCTCATCTTCACGTCAGCGGCTGGACGGGG +
Preference number: 6 (lower is better)
Translates to: EPTEPGNPGHLL*AAHLHVSGWTG
Trigger: CCCCGTCCAGCCGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 50 transcripts:
ENST00000375882.7
ENST00000383431.6
ENST00000383433.8
ENST00000413083.5
ENST00000416194.5
ENST00000422567.6
ENST00000437010.5
ENST00000443673.6
ENST00000451917.6
ENST00000452985.6
ENST00000454382.6
ENST00000460765.5
ENST00000461323.5
ENST00000464220.1
ENST00000464582.5
ENST00000465367.5
ENST00000465481.6
ENST00000465631.5
ENST00000468132.1
ENST00000468255.5
ENST00000469352.5
ENST00000471828.5
ENST00000475875.2
ENST00000476022.1
ENST00000476055.5
ENST00000476407.5
ENST00000476584.5
ENST00000480866.1
ENST00000481269.1
ENST00000481308.5
ENST00000485003.1
ENST00000485658.5
ENST00000486289.5
ENST00000488020.1
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
ENST00000497836.5
ENST00000550832.2
ENST00000611721.4
ENST00000612713.3
ENST00000613998.1
ENST00000614783.4
ENST00000615589.2
ENST00000615772.4
ENST00000617578.4
ENST00000619468.4
ENST00000621623.4
ENST00000621953.2
CDS TCA 72 bp GAGCCCACAGAACCAGGAAATCCAGGACACCTCCTCTaGGCTGCTCATCTTCACGTCAGGGGTTGGGGGCGA +
Preference number: 6 (lower is better)
Translates to: EPTEPGNPGHLL*AAHLHVRGWGR
Trigger: TCGCCCCCAACCCCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000375865.6
ENST00000383427.6
ENST00000412802.5
ENST00000418230.5
ENST00000429633.5
ENST00000431476.5
ENST00000454511.5
CDS GCA 72 bp CACAGAACCAGGAAATCCAGGACACCTCCTCTGAGCTaGTCATCTTCACGTCAGCGGCTGGACGGGGACCAG +
Preference number: 6 (lower is better)
Translates to: HRTRKSRTPPLS*SSSRQRLDGDQ
Trigger: CTGGTCCCCGTCCAGCCGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 50 transcripts:
ENST00000375882.7
ENST00000383431.6
ENST00000383433.8
ENST00000413083.5
ENST00000416194.5
ENST00000422567.6
ENST00000437010.5
ENST00000443673.6
ENST00000451917.6
ENST00000452985.6
ENST00000454382.6
ENST00000460765.5
ENST00000461323.5
ENST00000464220.1
ENST00000464582.5
ENST00000465367.5
ENST00000465481.6
ENST00000465631.5
ENST00000468132.1
ENST00000468255.5
ENST00000469352.5
ENST00000471828.5
ENST00000475875.2
ENST00000476022.1
ENST00000476055.5
ENST00000476407.5
ENST00000476584.5
ENST00000480866.1
ENST00000481269.1
ENST00000481308.5
ENST00000485003.1
ENST00000485658.5
ENST00000486289.5
ENST00000488020.1
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
ENST00000497836.5
ENST00000550832.2
ENST00000611721.4
ENST00000612713.3
ENST00000613998.1
ENST00000614783.4
ENST00000615589.2
ENST00000615772.4
ENST00000617578.4
ENST00000619468.4
ENST00000621623.4
ENST00000621953.2
CDS GCA 72 bp CACAGAACCAGGAAATCCAGGACACCTCCTCTGAGCTaGTCATCTTCACGTCAGGGGTTGGGGGCGATTGTC +
Preference number: 6 (lower is better)
Translates to: HRTRKSRTPPLS*SSSRQGLGAIV
Trigger: GACAATCGCCCCCAACCCCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000375865.6
ENST00000383427.6
ENST00000412802.5
ENST00000418230.5
ENST00000429633.5
ENST00000431476.5
ENST00000454511.5
CDS GCA 72 bp CACAGAACCAGGAAATCCAGGACACCTCCTCTGAGCTaGTCATCTTCACGTCAGCTGAGGTGGTGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: HRTRKSRTPPLS*SSSRQLRWCQP
Trigger: TGGCTGGCACCACCTCAGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000375885.8
ENST00000400116.7
ENST00000422261.6
ENST00000424502.6
ENST00000428483.6
ENST00000432290.6
ENST00000439572.6
ENST00000677388.1
ENST00000677536.1
ENST00000677758.1
CDS CCA 72 bp ATGCATCCTACAGAAGGGTCTTCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGAACAGGAACTGGGCAC +
Preference number: 6 (lower is better)
Translates to: MHPTEGSSTRQK*HVRMSGTGTGH
Trigger: GTGCCCAGTTCCTGTTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGACCCTTCTGTAGGATGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS CCA 72 bp GGCTGCGGGCTATTCAGTTTGCCTAGCACCTACTTTTaGGCCTTACCCCATCCAACATCTGGGCATGGGACC +
Preference number: 6 (lower is better)
Translates to: GCGLFSLPSTYF*ALPHPTSGHGT
Trigger: GGTCCCATGCCCAGATGTTGGATGGGGTAAGGCCCAAAAGTAGGTGCTAGGCAAACTGAATAGCCCGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465481.6
ENST00000475875.2
CDS CAA 72 bp GAACAGGAACTGGGCACAAACTGGTTGGCAGGTCTCTaGGGCCGGTACTCGGGATGCACCATGAAGAGCATG +
Preference number: 6 (lower is better)
Translates to: EQELGTNWLAGL*GRYSGCTMKSM
Trigger: CATGCTCTTCATGGTGCATCCCGAGTACCGGCCCAAGAGACCTGCCAACCAGTTTGTGCCCAGTTCCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383431.6
ENST00000413083.5
ENST00000416194.5
ENST00000437010.5
ENST00000614974.4
ENST00000620798.3
ENST00000621203.1
ENST00000622139.3
CDS GCA 72 bp GTAGCGGGCGTGGATCAATCCATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACTCTGGTTGGGGTTGTC +
Preference number: 6 (lower is better)
Translates to: VAGVDQSIKHLG*LLNQVTLVGVV
Trigger: GACAACCCCAACCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTATGGATTGATCCACGCCCGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 65 transcripts:
ENST00000375865.6
ENST00000375866.2
ENST00000375882.7
ENST00000375885.8
ENST00000383427.6
ENST00000383431.6
ENST00000383433.8
ENST00000400110.5
ENST00000400116.7
ENST00000412802.5
ENST00000413083.5
ENST00000416194.5
ENST00000418230.5
ENST00000422261.6
ENST00000422567.6
ENST00000424502.6
ENST00000428483.6
ENST00000429633.5
ENST00000431476.5
ENST00000432290.6
ENST00000436169.5
ENST00000437010.5
ENST00000439572.6
ENST00000443673.6
ENST00000448596.1
ENST00000451917.6
ENST00000452985.6
ENST00000453234.5
ENST00000454382.6
ENST00000454511.5
ENST00000455161.1
ENST00000458330.5
ENST00000460765.5
ENST00000461323.5
ENST00000464220.1
ENST00000465367.5
ENST00000465481.6
ENST00000465631.5
ENST00000468132.1
ENST00000468255.5
ENST00000471828.5
ENST00000475875.2
ENST00000476022.1
ENST00000476407.5
ENST00000480866.1
ENST00000481269.1
ENST00000481308.5
ENST00000485003.1
ENST00000486289.5
ENST00000488020.1
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
ENST00000614974.4
ENST00000615589.2
ENST00000617578.4
ENST00000619468.4
ENST00000620798.3
ENST00000621203.1
ENST00000621953.2
ENST00000622139.3
ENST00000677388.1
ENST00000677536.1
ENST00000677758.1
CDS GCA 72 bp TGGGCATGGGACCCAGAAACCTGGGCTTCTGACCCTTaGATCAAACGAAGACAGCTCTGCCTTCCCTTCACA +
Preference number: 6 (lower is better)
Translates to: WAWDPETWASDP*IKRRQLCLPFT
Trigger: TGTGAAGGGAAGGCAGAGCTGTCTTCGTTTGATGCAAGGGTCAGAAGCCCAGGTTTCTGGGTCCCATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465481.6
ENST00000475875.2
CDS GCA 72 bp AGGCAGGGCGTGGATCAATCCATAAAGCATCTCGGCTaGCTGCTCAATCAGGTCACTCTGGTTGGGGTTGTC +
Preference number: 6 (lower is better)
Translates to: RQGVDQSIKHLG*LLNQVTLVGVV
Trigger: GACAACCCCAACCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCTTTATGGATTGATCCACGCCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611721.4
ENST00000612713.3
ENST00000613998.1
ENST00000614783.4
ENST00000615772.4
ENST00000621623.4
CDS CCA 72 bp ACACATCCATGCACTTGGGGCAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCTGAAAGGCCTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: THPCTWGSRASP*LHLGCLKGLGD
Trigger: GTCTCCCAGGCCTTTCAGACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000460765.5
ENST00000461323.5
ENST00000465367.5
ENST00000465631.5
ENST00000468255.5
ENST00000471828.5
ENST00000476407.5
ENST00000481269.1
ENST00000481308.5
ENST00000486289.5
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
CDS CCA 72 bp ACCCCATCCAACATCTGGGCATGGGACCCAGAAACCTaGGCTTCTGACCCTTGCATCAAACGAAGACAGCTC +
Preference number: 6 (lower is better)
Translates to: TPSNIWAWDPET*ASDPCIKRRQL
Trigger: GAGCTGTCTTCGTTTGATGCAAGGGTCAGAAGCCCAGGTTTCTGGGTCCCATGCCCAGATGTTGGATGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465481.6
ENST00000475875.2
CDS CCA 72 bp CTACTTTTGGGCCTTACCCCATCCAACATCTGGGCATaGGACCCAGAAACCTGGGCTTCTGACCCTTGCATC +
Preference number: 6 (lower is better)
Translates to: LLLGLTPSNIWA*DPETWASDPCI
Trigger: GATGCAAGGGTCAGAAGCCCAGGTTTCTGGGTCCCATGCCCAGATGTTGGATGGGGTAAGGCCCAAAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465481.6
ENST00000475875.2
CDS CAA 72 bp AGCATCTCGGCTGCCTGCTCAATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCTTCATCAGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SISAACSIRSLW*GLSSSSSSGSR
Trigger: CCTGGAGCCTGATGAAGAACTGGAAGACAACCCCAACCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 68 transcripts:
ENST00000375865.6
ENST00000375866.2
ENST00000375882.7
ENST00000375885.8
ENST00000383427.6
ENST00000383431.6
ENST00000383433.8
ENST00000400110.5
ENST00000400116.7
ENST00000412802.5
ENST00000413083.5
ENST00000416194.5
ENST00000418230.5
ENST00000422261.6
ENST00000422567.6
ENST00000424502.6
ENST00000428483.6
ENST00000429633.5
ENST00000431476.5
ENST00000432290.6
ENST00000436169.5
ENST00000437010.5
ENST00000439572.6
ENST00000443673.6
ENST00000448596.1
ENST00000451917.6
ENST00000452985.6
ENST00000453234.5
ENST00000454382.6
ENST00000454511.5
ENST00000455161.1
ENST00000458330.5
ENST00000460765.5
ENST00000461323.5
ENST00000464220.1
ENST00000465367.5
ENST00000465631.5
ENST00000468132.1
ENST00000468255.5
ENST00000471828.5
ENST00000476022.1
ENST00000476407.5
ENST00000480866.1
ENST00000481269.1
ENST00000481308.5
ENST00000485003.1
ENST00000486289.5
ENST00000488020.1
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
ENST00000611721.4
ENST00000612713.3
ENST00000613998.1
ENST00000614783.4
ENST00000614974.4
ENST00000615589.2
ENST00000615772.4
ENST00000617578.4
ENST00000619468.4
ENST00000620798.3
ENST00000621203.1
ENST00000621623.4
ENST00000621953.2
ENST00000622139.3
ENST00000677536.1
ENST00000677758.1
CDS CAA 72 bp TCGGCTGCCTGCTCAATCAGGTCACTCTGGTTGGGGTaGTCTTCCAGTTCTTCATCTGAAACACAGCCCGGC +
Preference number: 6 (lower is better)
Translates to: SAACSIRSLWLG*SSSSSSETQPG
Trigger: GCCGGGCTGTGTTTCAGATGAAGAACTGGAAGACAACCCCAACCAGAGTGACCTGATTGAGCAGGCAGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465481.6
ENST00000475875.2
ENST00000677388.1
CDS TCA 72 bp GTCACTCTGGTTGGGGTTGTCTTCCAGTTCTTCATCTaGAACACAGCCCGGCCAAATGCAACAGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VTLVGVVFQFFI*NTARPNATGSR
Trigger: CCTGGAGCCTGTTGCATTTGGCCGGGCTGTGTTTCAGATGAAGAACTGGAAGACAACCCCAACCAGAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677388.1
CDS CCA 72 bp CGTCCGGATGTCGGGAACAGGAACAATGGGAAGCATTaGCTGGTTCTCACAGTACACACGAGGACAGTAACC +
Preference number: 6 (lower is better)
Translates to: RPDVGNRNNGKH*LVLTVHTRTVT
Trigger: GGTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATTGTTCCTGTTCCCGACATCCGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615589.2
ENST00000617578.4
ENST00000619468.4
ENST00000621953.2
CDS CCA 72 bp ATGCATCCTACAGAAGGGTCTTCTACGAGGCAGAAGTaGCACGTCCGGATGTCGGGAACAGGAACAATGGGA +
Preference number: 6 (lower is better)
Translates to: MHPTEGSSTRQK*HVRMSGTGTMG
Trigger: TCCCATTGTTCCTGTTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGACCCTTCTGTAGGATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615589.2
ENST00000617578.4
ENST00000619468.4
ENST00000621953.2
CDS TCA 72 bp TCGAACCCTGGTCAGAGTAATGGTGAGGGGCAGGCGTaGCGTTATTTCATTACACGGCTTCTCGGCATTCCA +
Preference number: 6 (lower is better)
Translates to: SNPGQSNGEGQA*RYFITRLLGIP
Trigger: TGGAATGCCGAGAAGCCGTGTAATGAAATAACGTCACGCCTGCCCCTCACCATTACTCTGACCAGGGTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000375885.8
ENST00000400116.7
ENST00000422261.6
ENST00000424502.6
ENST00000428483.6
ENST00000432290.6
ENST00000439572.6
ENST00000677388.1
ENST00000677536.1
CDS TCA 72 bp GAGCCCACAGAACCAGGAAATCCAGGACACCTCCTCTaGGCTGCTCATCTTCACGTCAGCAATACAAGTCTC +
Preference number: 6 (lower is better)
Translates to: EPTEPGNPGHLL*AAHLHVSNTSL
Trigger: GAGACTTGTATTGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375866.2
ENST00000400110.5
ENST00000436169.5
ENST00000448596.1
ENST00000453234.5
ENST00000455161.1
ENST00000458330.5
CDS CCA 72 bp ACACATCCATGCACTTGGGGCAGTAGAGCTTCACCATaGCTTCACCTGGGATGTCAATGGGAAGCATTGGCT +
Preference number: 6 (lower is better)
Translates to: THPCTWGSRASP*LHLGCQWEALA
Trigger: AGCCAATGCTTCCCATTGACATCCCAGGTGAAGCCATGGTGAAGCTCTACTGCCCCAAGTGCATGGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677536.1
CDS CAA 72 bp CAACGTTATATTGCTGGACGGTGGCAGACTCAGGACTaGGGCCCCAGTTTTGCCACTTTAGCACAGGTTCGT +
Preference number: 6 (lower is better)
Translates to: QRYIAGRWQTQD*GPSFATLAQVR
Trigger: ACGAACCTGTGCTAAAGTGGCAAAACTGGGGCCCAAGTCCTGAGTCTGCCACCGTCCAGCAATATAACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475875.2
ENST00000550832.2
CDS CAA 72 bp AGCATCTCGGCTGCCTGCTCAATCAGGTCACTCTGGTaGGGGTTGTCTTCCAGTTCTTCATCTGAAACACAG +
Preference number: 6 (lower is better)
Translates to: SISAACSIRSLW*GLSSSSSSETQ
Trigger: CTGTGTTTCAGATGAAGAACTGGAAGACAACCCCAACCAGAGTGACCTGATTGAGCAGGCAGCCGAGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465481.6
ENST00000475875.2
ENST00000677388.1
CDS TCA 72 bp CTGCTCATCTTCACGTCAGCAATACAAGTCTCTGCATaGCCCCCACGCCTTTCCCAAGGGTTTCCAAGTTTA +
Preference number: 6 (lower is better)
Translates to: LLIFTSAIQVSA*PPRLSQGFPSL
Trigger: TAAACTTGGAAACCCTTGGGAAAGGCGTGGGGGTCATGCAGAGACTTGTATTGCTGACGTGAAGATGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375866.2
ENST00000400110.5
ENST00000436169.5
ENST00000448596.1
ENST00000453234.5
ENST00000455161.1
ENST00000458330.5
CDS GCA 72 bp CACAGAACCAGGAAATCCAGGACACCTCCTCTGAGCTaGTCATCTTCACGTCAGCAATACAAGTCTCTGCAT +
Preference number: 6 (lower is better)
Translates to: HRTRKSRTPPLS*SSSRQQYKSLH
Trigger: ATGCAGAGACTTGTATTGCTGACGTGAAGATGAGCAGCTCAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375866.2
ENST00000400110.5
ENST00000436169.5
ENST00000448596.1
ENST00000453234.5
ENST00000455161.1
ENST00000458330.5
CDS GCA 72 bp AGAAAAAGACACAAATTGACTAGCCCAACGTTATATTaGTGGACGGTGGCAGACTCAGGACTTGGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: RKRHKLTSPTLY*WTVADSGLGPQ
Trigger: CTGGGGCCCAAGTCCTGAGTCTGCCACCGTCCAGCAATATAACGTTGGGCTAGTCAATTTGTGTCTTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475875.2
ENST00000550832.2
CDS CCA 72 bp CCTTTCCCTTCTTCAACACTCACCAATGGGAAGCATTaGCTGGTTCTCACAGTACACACGAGGACAGTAACC +
Preference number: 6 (lower is better)
Translates to: PFPSSTLTNGKH*LVLTVHTRTVT
Trigger: GGTTACTGTCCTCGTGTGTACTGTGAGAACCAGCCAATGCTTCCCATTGGTGAGTGTTGAAGAAGGGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000460765.5
ENST00000461323.5
ENST00000465367.5
ENST00000465631.5
ENST00000468255.5
ENST00000471828.5
ENST00000476407.5
ENST00000481269.1
ENST00000481308.5
ENST00000486289.5
ENST00000489925.5
ENST00000490307.5
ENST00000492499.5
ENST00000493079.5
CDS CAA 72 bp CTCACAGTACACACGAGGACAGTAACCAAAGTCTCCTaGCTGGTACTTTTCCAATGCTCAGAAGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: LTVHTRTVTKVS*LVLFQCSEGGR
Trigger: CCTGCCTCCTTCTGAGCATTGGAAAAGTACCAGCAAGGAGACTTTGGTTACTGTCCTCGTGTGTACTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677758.1
CDS CCA 72 bp AAAAGACACAAATTGACTAGCCCAACGTTATATTGCTaGACGGTGGCAGACTCAGGACTTGGGCCCCAGTTT +
Preference number: 6 (lower is better)
Translates to: KRHKLTSPTLYC*TVADSGLGPQF
Trigger: AAACTGGGGCCCAAGTCCTGAGTCTGCCACCGTCCAGCAATATAACGTTGGGCTAGTCAATTTGTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475875.2
ENST00000550832.2
CDS TCA 72 bp GTCACTCTGGTTGGGGTTGTCTTCCAGTTCTTCATCTaGAACACAGCCCGGCCAAATGCAACTACTTGTTTT +
Preference number: 6 (lower is better)
Translates to: VTLVGVVFQFFI*NTARPNATTCF
Trigger: AAAACAAGTAGTTGCATTTGGCCGGGCTGTGTTTCAGATGAAGAACTGGAAGACAACCCCAACCAGAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465481.6
ENST00000475875.2
CDS GCA 72 bp AGCTTCCTTAAACAGGGCTTAAACATGACTTCTTGCTaGAGGAACCTGTGTCTCTTACTGCTCAGAAGGAGG +
Preference number: 6 (lower is better)
Translates to: SFLKQGLNMTSC*RNLCLLLLRRR
Trigger: CCTCCTTCTGAGCAGTAAGAGACACAGGTTCCTGCAGCAAGAAGTCATGTTTAAGCCCTGTTTAAGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000465481.6
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
ENST00000493079.5
CDS GCA 72 bp GCTAGCTTCCTTAAACAGGGCTTAAACATGACTTCTTaGTGCAGGAACCTGTGTCTCTTACTGCTCAGAAGG +
Preference number: 6 (lower is better)
Translates to: ASFLKQGLNMTS*CRNLCLLLLRR
Trigger: CCTTCTGAGCAGTAAGAGACACAGGTTCCTGCAGCAAGAAGTCATGTTTAAGCCCTGTTTAAGGAAGCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000465481.6
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
ENST00000493079.5
CDS CCA 72 bp TGTCCTGGATGTAGTCTTCATCCACCTGTCAGGACATaGAAGCCAAGAGGGAACCCATATCAAAATCCTCAT +
Preference number: 6 (lower is better)
Translates to: CPGCSLHPPVRT*KPRGNPYQNPH
Trigger: ATGAGGATTTTGATATGGGTTCCCTCTTGGCTTCCATGTCCTGACAGGTGGATGAAGACTACATCCAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475875.2
CDS CAA 90 bp GCTCTAAGTGATGCCTTATCATCAACACAACTGCATCTGTTGTGCTaGTTTCTCACTCCCAACTCAGCAGAAGTACTTGTGTCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: ALSDALSSTQLHLLC*FLTPNSAEVLVSLP
Trigger: AGGGAGAGACACAAGTACTTCTGCTGAGTTGGGAGTGAGAAACAAGCACAACAGATGCAGTTGTGTTGATGATAAGGCATCACTTAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475875.2
ENST00000550832.2
CDS GCA 72 bp TGCATTTCATCACACGCAGTCCTAGGAATTCTGTTCTaGTCCATACTAAAAACACCACCCAATCCACTGAGC +
Preference number: 6 (lower is better)
Translates to: CISSHAVLGILF*SILKTPPNPLS
Trigger: GCTCAGTGGATTGGGTGGTGTTTTTAGTATGGAGCAGAACAGAATTCCTAGGACTGCGTGTGATGAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
CDS TCA 72 bp ACCAAAGTCTCCTTGCTGGTACTTTTCCAACTGAGGTaGATACAATGGAAGGGGTTGGCAGGTAGATGTAAA +
Preference number: 6 (lower is better)
Translates to: TKVSLLVLFQLR*IQWKGLAGRCK
Trigger: TTTACATCTACCTGCCAACCCCTTCCATTGTATTCACCTCAGTTGGAAAAGTACCAGCAAGGAGACTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
ENST00000493079.5
CDS CAA 72 bp TTAGGCAGGCTACAAACCATCAGAGCCATTTGTTGTTaGTTCCTTGAGGAAGAGGCAGTCTATCACAACTCT +
Preference number: 6 (lower is better)
Translates to: LGRLQTIRAICC*FLEEEAVYHNS
Trigger: AGAGTTGTGATAGACTGCCTCTTCCTCAAGGAACAAACAACAAATGGCTCTGATGGTTTGTAGCCTGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
ENST00000493079.5
CDS CAA 72 bp GATGCCTTATCATCAACACAACTGCATCTGTTGTGCTaGTTTCTCACTCCCAACTCAGCAGAAGTACTTGTG +
Preference number: 6 (lower is better)
Translates to: DALSSTQLHLLC*FLTPNSAEVLV
Trigger: CACAAGTACTTCTGCTGAGTTGGGAGTGAGAAACAAGCACAACAGATGCAGTTGTGTTGATGATAAGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475875.2
ENST00000550832.2
CDS CAA 90 bp TTCTTCCAATTAGGCAGGCTACAAACCATCAGAGCCATTTGTTGTTaGTTCCTTGAGGAAGAGGCAGTCTATCACAACTCTCTGATTCAA +
Preference number: 6 (lower is better)
Translates to: FFQLGRLQTIRAICC*FLEEEAVYHNSLIQ
Trigger: TTGAATCAGAGAGTTGTGATAGACTGCCTCTTCCTCAAGGAACAAACAACAAATGGCTCTGATGGTTTGTAGCCTGCCTAATTGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000461323.5
ENST00000465367.5
ENST00000468255.5
ENST00000476407.5
ENST00000486289.5
ENST00000490307.5
ENST00000493079.5
CDS TCA 72 bp AAATCCTCATCTTTGACCTGGGCAAAATGCTCTAAGTaGTGCCTTATCATCAACACAACTGCATCTGTTGTG +
Preference number: 6 (lower is better)
Translates to: KSSSLTWAKCSK*CLIINTTASVV
Trigger: CACAACAGATGCAGTTGTGTTGATGATAAGGCATCACTTAGAGCATTTTGCCCAGGTCAAAGATGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475875.2
ENST00000550832.2