Pregenerated sensors for CSNK1G2 (Homo sapiens)
Ensembl gene IDs: ENSG00000133275Ensembl transcript IDs: ENST00000255641.13, ENST00000589350.2, ENST00000589385.5, ENST00000591752.5, ENST00000614707.1, ENST00000615564.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGTGCCCACGCGCCCCACGCGGCAGGGCTGAGGGCCGAGCAGGGTaGCACCAACCGGTCCTCCCACCTCGGGTTCCAGGCGCCGGGGCG | + |
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Preference number: 1 (lower is better) Translates to: PCPRAPRGRAEGRAG*HQPVLPPRVPGAGA Trigger: CGCCCCGGCGCCTGGAACCCGAGGTGGGAGGACCGGTTGGTGTCACCCTGCTCGGCCCTCAGCCCTGCCGCGTGGGGCGCGTGGGCACGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255641.13 |
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| 3UTR-3UTR TCA 90 bp | GCACGGAGAAGATTCAGGGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCACCTCTGCAGGCGCTGTaGTCGGGGCGTTGGAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: ARRRFRGLHAPRVTCVAAPLQAL*SGRWSG Trigger: GCCACTCCAACGCCCCGATCACAGCGCCTGCAGAGG...TGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATCTTCTCCGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| 3UTR CAA 90 bp | GGCTGCACGGAGAAGATTCAGGGGGCTGCACGCGCCCAGGGTCACTaGTGTCGCTGCAGCGATTTTCTCTTTCTCCTCTTGAAGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: GCTEKIQGAARAQGH*CRCSDFLFLLLKKQ Trigger: CTGTTTCTTCAAGAGGAGAAAGAGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATCTTCTCCGTGCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| 3UTR-3UTR CCA 90 bp | GATTCAGGGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTAGAAACAGCAGCATTTaGTTTCATCGGCCACCTCCA | + |
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Preference number: 2 (lower is better) Translates to: DSGGCTRPGSLVSLQRFSRNSSI*FHRPPP Trigger: TGGAGGTGGCCGATGAAACCAAATGCTGCTGTTTCT...AGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| 3UTR-3UTR CAA 90 bp | GATTCAGGGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTGCTGTGATCGGGGCGTaGGAGTGGCCGGCCGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: DSGGCTRPGSLVSLQRFSAVIGA*EWPAVG Trigger: CCCCACGGCCGGCCACTCCAACGCCCCGATCACAGC...AGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| 3UTR-3UTR CAA 90 bp | GATTCAGGGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTAAGAAACAGCAGCATTaGGTTTCATCGGCCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: DSGGCTRPGSLVSLQRFSKKQQH*VSSATS Trigger: GGAGGTGGCCGATGAAACCAAATGCTGCTGTTTCTT...AGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR TCA 90 bp | GGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTCTTTCTCCCTCTGCAGGCGCTGTaGTCGGGGCGTTGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GAARAQGHLCRCSDFLFLPLQAL*SGRWSG Trigger: GCCACTCCAACGCCCCGATCACAGCGCCTGCAGAGG...GAGAAAGAGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR GCA 90 bp | GGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTCTTTCTCCCTCCAGGCCGGGCCTaGCCTCCCCTCGAGAAAACG | + |
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Preference number: 4 (lower is better) Translates to: GAARAQGHLCRCSDFLFLPPGRA*PPLEKT Trigger: CGTTTTCTCGAGGGGAGGGCAGGCCCGGCCTGGAGG...GAGAAAGAGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR GCA 90 bp | GCACGGAGAAGATTCAGGGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGGTCGGTGTGGACGGTaGCGATGGGGGTCGGTCATA | + |
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Preference number: 4 (lower is better) Translates to: ARRRFRGLHAPRVTCVAAGRCGR*RWGSVI Trigger: TATGACCGACCCCCATCGGCACCGTCCACACCGACC...TGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATCTTCTCCGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR GCA 90 bp | AAGATTCAGGGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTGCCAGGCGCGGCCCCTaGAGTCTGCGTTCTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KIQGAARAQGHLCRCSDFARRGP*SLRSGF Trigger: GAAGCCAGAACGCAGACTGCAGGGGCCGCGCCTGGC...AAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR GCA 90 bp | GGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTCTTTCTCGAAGATTCAGGGGGCTaGACGCGCCCAGGGTCACTT | + |
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Preference number: 4 (lower is better) Translates to: GAARAQGHLCRCSDFLFLEDSGG*TRPGSL Trigger: AAGTGACCCTGGGCGCGTGCAGCCCCCTGAATCTTC...GAGAAAGAGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR CCA 90 bp | GGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTCTTTCTCCGTGGCCATCTCCTCTaGGAAGTTCTCGCAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: GAARAQGHLCRCSDFLFLRGHLL*EVLAEH Trigger: GTGCTCTGCGAGAACTTCCCAGAGGAGATGGCCACG...GAGAAAGAGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR CCA 90 bp | GGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTCTTTCTCTGTGGACGGTGCCGATaGGGGTCGGTCATAGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: GAARAQGHLCRCSDFLFLCGRCR*GSVIVE Trigger: TTCGACTATGACCGACCCCCATCGGCACCGTCCACA...GAGAAAGAGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR CCA 90 bp | AAGATTCAGGGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTGTGGAGTTCAACGCCTaGTTTTTGCTGTGCGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KIQGAARAQGHLCRCSDFVEFNA*FLLCGW Trigger: CCAGCCGCACAGCAAAAACCAGGCGTTGAACTCCAC...AAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| 3UTR CAA 72 bp | GAGAAGATTCAGGGGGCTGCACGCGCCCAGGGTCACTaGTGTCGCTGCAGCGATTTTCTCTTTCTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EKIQGAARAQGH*CRCSDFLFLLL Trigger: CAAGAGGAGAAAGAGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR GCA 90 bp | GGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTCTTTCTCGGTCACTTGTGTCGCTaGAGCGATTTTCTCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GAARAQGHLCRCSDFLFLGHLCR*SDFLFL Trigger: GAGAAAGAGAAAATCGCTGCAGCGACACAAGTGACC...GAGAAAGAGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS TCA 90 bp | TCACTGCGGCCGGTGGGCGGGCGTGGGCCCGTGGCTCCCAGCTACTaGGACGCAGGCGTTCGGGCCGGCCAGGCCGCGCTGCTCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: SLRPVGGRGPVAPSY*DAGVRAGQAALLFS Trigger: TGAGAAGAGCAGCGCGGCCTGGCCGGCCCGAACGCCTGCGTCTCAGTAGCTGGGAGCCACGGGCCCACGCCCGCCCACCGGCCGCAGTGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS CCA 90 bp | CTGTGGCTAGAACATCACTGCGGCCGGTGGGCGGGCGTGGGCCCGTaGCTCCCAGCTACTGAGACGCAGGCGTTCGGGCCGGCCAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: LWLEHHCGRWAGVGP*LPATETQAFGPARP Trigger: CGGCCTGGCCGGCCCGAACGCCTGCGTCTCAGTAGCTGGGAGCCACGGGCCCACGCCCGCCCACCGGCCGCAGTGATGTTCTAGCCACAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS GCA 90 bp | CTCCCAGCTACTGAGACGCAGGCGTTCGGGCCGGCCAGGCCGCGCTaGTCTTCTCAGTGGCCTCGGGGTCGCTCTCGGGGGCAGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: LPATETQAFGPARPR*SSQWPRGRSRGQET Trigger: TGTCTCCTGCCCCCGAGAGCGACCCCGAGGCCACTGAGAAGAGCAGCGCGGCCTGGCCGGCCCGAACGCCTGCGTCTCAGTAGCTGGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 ENST00000614707.1 |
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| CDS CCA 90 bp | CCTGAGGTCTTGGCTCCTCTGTGGCTAGAACATCACTGCGGCCGGTaGGCGGGCGTGGGCCCGTGGCTCCCAGCTACTGAGACGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: PEVLAPLWLEHHCGR*AGVGPWLPATETQA Trigger: CGCCTGCGTCTCAGTAGCTGGGAGCCACGGGCCCACGCCCGCCCACCGGCCGCAGTGATGTTCTAGCCACAGAGGAGCCAAGACCTCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS GCA 90 bp | CTCTGGAAACCTGAGGTCTTGGCTCCTCTGTGGCTAGAACATCACTaGGGCCGGTGGGCGGGCGTGGGCCCGTGGCTCCCAGCTACTGAG | + |
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Preference number: 5 (lower is better) Translates to: LWKPEVLAPLWLEHH*GRWAGVGPWLPATE Trigger: CTCAGTAGCTGGGAGCCACGGGCCCACGCCCGCCCACCGGCCGCAGTGATGTTCTAGCCACAGAGGAGCCAAGACCTCAGGTTTCCAGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS TCA 90 bp | TCTCAGTGGCCTCGGGGTCGCTCTCGGGGGCAGGAGACATTCTGCTaGCACATCCCACCGCCTCAAAGCTCACGGCTCACAGCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SQWPRGRSRGQETFC*HIPPPQSSRLTARL Trigger: GAGCCTGGCTGTGAGCCGTGAGCTTTGAGGCGGTGGGATGTGTCAGCAGAATGTCTCCTGCCCCCGAGAGCGACCCCGAGGCCACTGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589350.2 |
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| CDS TCA 90 bp | TCTCAGTGGCCTCGGGGTCGCTCTCGGGGGCAGGAGACATTCTGCTaGCACATCCCACCGCCTCAAAGCTCACGGCTCACAGCTGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: SQWPRGRSRGQETFC*HIPPPQSSRLTAAL Trigger: CAGGGCAGCTGTGAGCCGTGAGCTTTGAGGCGGTGGGATGTGTCAGCAGAATGTCTCCTGCCCCCGAGAGCGACCCCGAGGCCACTGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614707.1 |
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| CDS TCA 90 bp | TCTCAGTGGCCTCGGGGTCGCTCTCGGGGGCAGGAGACATTCTGCTaGCACATCCCACCGCCTCAAAGCTCACGGCTCACAGCTTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SQWPRGRSRGQETFC*HIPPPQSSRLTAWL Trigger: GAGCCAAGCTGTGAGCCGTGAGCTTTGAGGCGGTGGGATGTGTCAGCAGAATGTCTCCTGCCCCCGAGAGCGACCCCGAGGCCACTGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255641.13 |
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| CDS TCA 90 bp | TCTCAGTGGCCTCGGGGTCGCTCTCGGGGGCAGGAGACATTCTGCTaGCACATCCCACCGCCTCAAAGCTCACGGCTCACAGCTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SQWPRGRSRGQETFC*HIPPPQSSRLTASC Trigger: GCAGGAAGCTGTGAGCCGTGAGCTTTGAGGCGGTGGGATGTGTCAGCAGAATGTCTCCTGCCCCCGAGAGCGACCCCGAGGCCACTGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591752.5 |
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| CDS CCA 90 bp | GTGCAAATCCCAAGTCTCTGGAAACCTGAGGTCTTGGCTCCTCTGTaGCTAGAACATCACTGCGGCCGGTGGGCGGGCGTGGGCCCGTGG | + |
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Preference number: 5 (lower is better) Translates to: VQIPSLWKPEVLAPL*LEHHCGRWAGVGPW Trigger: CCACGGGCCCACGCCCGCCCACCGGCCGCAGTGATGTTCTAGCCACAGAGGAGCCAAGACCTCAGGTTTCCAGAGACTTGGGATTTGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS-3UTR CAA 90 bp | GATTCAGGGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTCTCGCGCCCAGGGTCACTaGTGTCGCTGCAGCGATTTT | + |
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Preference number: 5 (lower is better) Translates to: DSGGCTRPGSLVSLQRFSRAQGH*CRCSDF Trigger: AAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCG...AGAAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS-3UTR CAA 90 bp | AAGATTCAGGGGGCTGCACGCGCCCAGGGTCACTTGTGTCGCTGCAGCGATTTTTTCTGGTACCGCTCCTaGAGCGTGTCGGCCTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: KIQGAARAQGHLCRCSDFFWYRS*SVSALS Trigger: GCTCAAGGCCGACACGCTCAAGGAGCGGTACCAGAA...AAAATCGCTGCAGCGACACAAGTGACCCTGGGCGCGTGCAGCCCCCTGAATCTT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000615564.1 |
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| CDS CCA 90 bp | TGGCCTCTCCACGGTGACTCTGCTGCCGTGCAAATCCCAAGTCTCTaGAAACCTGAGGTCTTGGCTCCTCTGTGGCTAGAACATCACTGC | + |
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Preference number: 5 (lower is better) Translates to: WPLHGDSAAVQIPSL*KPEVLAPLWLEHHC Trigger: GCAGTGATGTTCTAGCCACAGAGGAGCCAAGACCTCAGGTTTCCAGAGACTTGGGATTTGCACGGCAGCAGAGTCACCGTGGAGAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS TCA 72 bp | CCGGTGGGCGGGCGTGGGCCCGTGGCTCCCAGCTACTaGGACGCAGGCGTTCGGGCCGGCCAGGCCGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: PVGGRGPVAPSY*DAGVRAGQAAL Trigger: CAGCGCGGCCTGGCCGGCCCGAACGCCTGCGTCTCAGTAGCTGGGAGCCACGGGCCCACGCCCGCCCACCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS GCA 72 bp | ACTGAGACGCAGGCGTTCGGGCCGGCCAGGCCGCGCTaGTCTTCTCAGTGGCCTCGGGGTCGCTCTCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TETQAFGPARPR*SSQWPRGRSRG Trigger: CCCCCGAGAGCGACCCCGAGGCCACTGAGAAGAGCAGCGCGGCCTGGCCGGCCCGAACGCCTGCGTCTCAGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 ENST00000614707.1 |
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| CDS CCA 72 bp | GCGTTCGGGCCGGCCAGGCCGCGCTGCTCTTCTCAGTaGCCTCGGGGTCGCTCTCGGGGGCAGGAGACATTC | + |
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Preference number: 6 (lower is better) Translates to: AFGPARPRCSSQ*PRGRSRGQETF Trigger: GAATGTCTCCTGCCCCCGAGAGCGACCCCGAGGCCACTGAGAAGAGCAGCGCGGCCTGGCCGGCCCGAACGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 ENST00000614707.1 |
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| CDS CAA 72 bp | CTCCGGATGCCGTGGCTGCTCCGGCCCCCGCCGGCCTaGGACATTCTCCGGCCCTCCTCCGTCTCCCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LRMPWLLRPPPA*DILRPSSVSPF Trigger: GAAAGGGGAGACGGAGGAGGGCCGGAGAATGTCCAAGGCCGGCGGGGGCCGGAGCAGCCACGGCATCCGGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS GCA 72 bp | GGCGGAGCTCCCCGAAGTTGCCGCAGCCGATCTTCTTaGCGACGCGGAAGTTGGGGCCCACCATCAGGACCC | + |
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Preference number: 6 (lower is better) Translates to: GGAPRSCRSRSS*RRGSWGPPSGP Trigger: GGGTCCTGATGGTGGGCCCCAACTTCCGCGTCGGCAAGAAGATCGGCTGCGGCAACTTCGGGGAGCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000589385.5 ENST00000591752.5 |
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| CDS CAA 72 bp | AGGCGGAGCTCCCCGAAGTTGCCGCAGCCGATCTTCTaGCCGACGCGGAAGTTGGGGCCCACCATCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: RRSSPKLPQPIF*PTRKLGPTIRT Trigger: GGTCCTGATGGTGGGCCCCAACTTCCGCGTCGGCAAGAAGATCGGCTGCGGCAACTTCGGGGAGCTCCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000589385.5 ENST00000591752.5 |
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| CDS GCA 72 bp | GATGATGCCAGGCTGGGTCGGACCCATCCCCTTCGGTaGAGAGCGGAGAGGCCACTGAGAGGGAGCTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: DDARLGRTHPLR*RAERPLRGSCQ Trigger: TTGGCAGCTCCCTCTCAGTGGCCTCTCCGCTCTGCACCGAAGGGGATGGGTCCGACCCAGCCTGGCATCATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589350.2 |
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| CDS TCA 72 bp | CCTCGGGGTCGCTCTCGGGGGCAGGAGACATTCTGCTaGCACATCCCACCGCCTCAAAGCTCACGGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: PRGRSRGQETFC*HIPPPQSSRLT Trigger: TGTGAGCCGTGAGCTTTGAGGCGGTGGGATGTGTCAGCAGAATGTCTCCTGCCCCCGAGAGCGACCCCGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 ENST00000614707.1 |
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| CDS CCA 72 bp | CCAAGTCTCTGGAAACCTGAGGTCTTGGCTCCTCTGTaGCTAGAACATCACTGCGGCCGGTGGGCGGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: PSLWKPEVLAPL*LEHHCGRWAGV Trigger: CACGCCCGCCCACCGGCCGCAGTGATGTTCTAGCCACAGAGGAGCCAAGACCTCAGGTTTCCAGAGACTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS CAA 90 bp | GACTCTGCTGCCGTGCAAATCCCAAGTCTCTGGAAACCTGAGGTCTaGGCTCCTCTGTGGCTAGAACATCACTGCGGCCGGTGGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: DSAAVQIPSLWKPEV*APLWLEHHCGRWAG Trigger: GCCCGCCCACCGGCCGCAGTGATGTTCTAGCCACAGAGGAGCCAAGACCTCAGGTTTCCAGAGACTTGGGATTTGCACGGCAGCAGAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS GCA 72 bp | CCTGGCCTTGGAGTCGCTCATGTTTACCCTCAGCCTTaGCCCAGCAACGCTGAAACCAACCTAGGCGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGLGVAHVYPQP*PSNAETNLGGA Trigger: AGCTCCGCCTAGGTTGGTTTCAGCGTTGCTGGGGCAAGGCTGAGGGTAAACATGAGCGACTCCAAGGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589350.2 |
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| CDS CCA 72 bp | CACGGTGACTCTGCTGCCGTGCAAATCCCAAGTCTCTaGAAACCTGAGGTCTTGGCTCCTCTGTGGCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: HGDSAAVQIPSL*KPEVLAPLWLE Trigger: TTCTAGCCACAGAGGAGCCAAGACCTCAGGTTTCCAGAGACTTGGGATTTGCACGGCAGCAGAGTCACCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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| CDS CCA 72 bp | TCCTTTCTTGTCAAAATCCATAAGTTTGTGATACCCTaGCCTCTCCACGGTGACTCTGCTGCCGTGCAAATC | + |
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Preference number: 6 (lower is better) Translates to: SFLVKIHKFVIP*PLHGDSAAVQI Trigger: GATTTGCACGGCAGCAGAGTCACCGTGGAGAGGCCAGGGTATCACAAACTTATGGATTTTGACAAGAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255641.13 ENST00000589350.2 ENST00000591752.5 |
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