RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSNK1E (Homo sapiens)

Ensembl gene IDs: ENSG00000213923

Ensembl transcript IDs: ENST00000359867.7, ENST00000366216.6, ENST00000396832.6, ENST00000403904.5, ENST00000405675.7, ENST00000413574.6, ENST00000430335.1, ENST00000431611.5, ENST00000431632.5, ENST00000442216.1, ENST00000451964.5, ENST00000494610.1, ENST00000495232.5, ENST00000498529.5, ENST00000612795.2

Found 704 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGGTGGGCCAGGGGGCAGGGCTCGGGTCGCGGACCCCCGTAGCTaGCCCATCCTCTCCTCGCGTTCGTGTTCTCGCCGCTCCCGGTCC +
Preference number: 1 (lower is better)
Translates to: VGGPGGRARVADPRS*PILSSRSCSRRSRS
Trigger: GGACCGGGAGCGGCGAGAACACGAACGCGAGGAGAGGATGGGGCAGCTACGGGGGTCCGCGACCCGAGCCCTGCCCCCTGGCCCACCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR CCA 90 bp CTCTGGGAGAAGTATTGCCAGCCGGCTGGATGCGGGAGGCTGGCGTaGAAGCCACGGGCTCGGCGGCACTGCGGAGCCGGTTGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: LWEKYCQPAGCGRLA*KPRARRHCGAGWQW
Trigger: CCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATACTTCTCCCAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR CCA 90 bp GATCGCTCTGGGAGAAGTATTGCCAGCCGGCTGGATGCGGGAGGCTaGCGTGGAAGCCACGGGCTCGGCGGCACTGCGGAGCCGGTTGGC +
Preference number: 1 (lower is better)
Translates to: DRSGRSIASRLDAGG*RGSHGLGGTAEPVG
Trigger: GCCAACCGGCTCCGCAGTGCCGCCGAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATACTTCTCCCAGAGCGATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR TCA 90 bp CACTTGTCTGTGAGGCTGGGATCCGGGAGACCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACGTTGGCGGGCGCACCCCTGTGCAGCC +
Preference number: 1 (lower is better)
Translates to: HLSVRLGSGRPLAAQ*GLRRRRWRAHPCAA
Trigger: GGCTGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGATCCCAGCCTCACAGACAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR GCA 90 bp CGCCCAGTGAGGTCTGAGGAGGAGACGTTGGCGGGCGCACCCCTGTaGAGCCTCATACTCACCTTCCTCTCCCGGTCGACCCGCGAGATC +
Preference number: 1 (lower is better)
Translates to: RPVRSEEETLAGAPL*SLILTFLSRSTREI
Trigger: GATCTCGCGGGTCGACCGGGAGAGGAAGGTGAGTATGAGGCTGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR CCA 90 bp GGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCCCATaGCAGGGCCTTTTCCACCATGGCCTCCACTGTGCTGCCATCTCT +
Preference number: 1 (lower is better)
Translates to: GHHPSLRLSWPSRTP*QGLFHHGLHCAAIS
Trigger: AGAGATGGCAGCACAGTGGAGGCCATGGTGGAAAAGGCCCTGCCATGGGGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR CCA 90 bp CTAGCTATGAGTCTGTCCTGGGACCCGTTCCCACCAGGCCCCTTGTaGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAA +
Preference number: 1 (lower is better)
Translates to: LAMSLSWDPFPPGPL*AVATIPPSGCPGPQ
Trigger: TTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGGGAACGGGTCCCAGGACAGACTCATAGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR GCA 90 bp TCAAATGGCACACTTGTCTGTGAGGCTGGGATCCGGGAGACCTCTTaGCGCCCAGTGAGGTCTGAGGAGGAGACGTTGGCGGGCGCACCC +
Preference number: 1 (lower is better)
Translates to: SNGTLVCEAGIRETS*RPVRSEEETLAGAP
Trigger: GGGTGCGCCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGATCCCAGCCTCACAGACAAGTGTGCCATTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR GCA 90 bp GTGCCCAGTGCCCAATGCCCTGTGGTGGAAAGAGCTGGTCCCAGGTaGTCAAGGCCATGGGCCCCATTTGGAGCCAGAAGGTCTAGGGTG +
Preference number: 1 (lower is better)
Translates to: VPSAQCPVVERAGPR*SRPWAPFGARRSRV
Trigger: CACCCTAGACCTTCTGGCTCCAAATGGGGCCCATGGCCTTGAGCACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGGCACTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CCA 90 bp AAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACACCTaGCGACATCAGAAATGGGGCCCTGGAGTCCAGACCACAGGCCAG +
Preference number: 1 (lower is better)
Translates to: KKHFLRPGPDGLRHT*RHQKWGPGVQTTGQ
Trigger: CTGGCCTGTGGTCTGGACTCCAGGGCCCCATTTCTGATGTCGCCAGGTGTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR GCA 90 bp GAGTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTaGAGCCAACAACACAGGGTGTCCTGTCTACTGTTGGGTAGCATG +
Preference number: 1 (lower is better)
Translates to: EWLPGPRDPQIPAPR*SQQHRVSCLLLGSM
Trigger: CATGCTACCCAACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
3UTR CCA 90 bp AGACACAGGAGAACGGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTaGCACCTGCTGTCTTGGGAAACACAGGTCAATACATCCACACAC +
Preference number: 1 (lower is better)
Translates to: RHRRTGIRAGRRGGP*HLLSWETQVNTSTH
Trigger: GTGTGTGGATGTATTGACCTGTGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCCGTTCTCCTGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR CCA 90 bp GAACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTaGCCCCGATGGGCTCAGGCACACCTGGCGACATCAGAAATGGGG +
Preference number: 1 (lower is better)
Translates to: EQGVIPSSQETLPQA*PRWAQAHLATSEMG
Trigger: CCCCATTTCTGATGTCGCCAGGTGTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR TCA 90 bp CCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTaGGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTG +
Preference number: 1 (lower is better)
Translates to: PNICPARHGQLGSWA*DPRKASPVHASTLL
Trigger: CAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
3UTR TCA 90 bp GGTGGGAACTGCCTTCAACTGACTACACCACTCCCTGATGATGCTTaGGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGG +
Preference number: 1 (lower is better)
Translates to: GGNCLQLTTPLPDDA*GPALALGPVTSPTR
Trigger: CCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCATCATCAGGGAGTGGTGTAGTCAGTTGAAGGCAGTTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR TCA 90 bp GGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGGCATTaGGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCTCTGCCC +
Preference number: 1 (lower is better)
Translates to: GDCWRWFSSLQWPWH*VRDWQRIRLWVPLP
Trigger: GGGCAGAGGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR CCA 90 bp CTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTaGAGAGGTGCTCCTGGCCTGGTTGGAAAAGAGATCTTGCTGGCT +
Preference number: 1 (lower is better)
Translates to: LKRDFQEGGQTSSSG*RGAPGLVGKEILLA
Trigger: AGCCAGCAAGATCTCTTTTCCAACCAGGCCAGGAGCACCTCTCCACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR TCA 90 bp AGTCAGAGAAGACGTCCCCTGCCCATATCCCATTTCCAGCCTTGCTaGAAAGGGCAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGA +
Preference number: 1 (lower is better)
Translates to: SQRRRPLPISHFQPC*KGQQRPLPEVPSLR
Trigger: TCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTGCCCTTTTCAGCAAGGCTGGAAATGGGATATGGGCAGGGGACGTCTTCTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR TCA 90 bp GGTGCTCAAGGCCATGGGCCCCATTTGGAGCCAGAAGGTCTAGGGTaGAGTCAGAGAAGACGTCCCCTGCCCATATCCCATTTCCAGCCT +
Preference number: 1 (lower is better)
Translates to: GAQGHGPHLEPEGLG*SQRRRPLPISHFQP
Trigger: AGGCTGGAAATGGGATATGGGCAGGGGACGTCTTCTCTGACTTCACCCTAGACCTTCTGGCTCCAAATGGGGCCCATGGCCTTGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR GCA 90 bp TGGCCTCAGGGTGAAGGTTCCCATTGCATGTTTTCCAGGTGCTTCTaGCAGGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGT +
Preference number: 1 (lower is better)
Translates to: WPQGEGSHCMFSRCF*QGTAGGGSAHYSGR
Trigger: ACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAGCACCTGGAAAACATGCAATGGGAACCTTCACCCTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
3UTR CCA 90 bp GAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTaGGGCTGTGCGTATCTCCTGGATTCTGAGGCTCGGAAAACTCGG +
Preference number: 1 (lower is better)
Translates to: EKPSTGSQPLSSQSG*GCAYLLDSEARKTR
Trigger: CCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR CCA 90 bp TGGCAGGGCCTTTTCCACCATGGCCTCCACTGTGCTGCCATCTCTTaGGAACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAG +
Preference number: 1 (lower is better)
Translates to: WQGLFHHGLHCAAIS*EQGVIPSSQETLPQ
Trigger: CTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGTTCCCAAGAGATGGCAGCACAGTGGAGGCCATGGTGGAAAAGGCCCTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR CCA 90 bp CAATGCCCTGTGGTGGAAAGAGCTGGTCCCAGGTGCTCAAGGCCATaGGCCCCATTTGGAGCCAGAAGGTCTAGGGTGAAGTCAGAGAAG +
Preference number: 1 (lower is better)
Translates to: QCPVVERAGPRCSRP*APFGARRSRVKSEK
Trigger: CTTCTCTGACTTCACCCTAGACCTTCTGGCTCCAAATGGGGCCCATGGCCTTGAGCACCTGGGACCAGCTCTTTCCACCACAGGGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CCA 90 bp GGAGTGACTATCTCGATAAGAAAGTGCCCAGTGCCCAATGCCCTGTaGTGGAAAGAGCTGGTCCCAGGTGCTCAAGGCCATGGGCCCCAT +
Preference number: 1 (lower is better)
Translates to: GVTISIRKCPVPNAL*WKELVPGAQGHGPH
Trigger: ATGGGGCCCATGGCCTTGAGCACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGGCACTGGGCACTTTCTTATCGAGATAGTCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR GCA 90 bp AGACGTGGGAGTGACTATCTCGATAAGAAAGTGCCCAGTGCCCAATaGCCTGTGGTGGAAAGAGCTGGTCCCAGGTGCTCAAGGCCATGG +
Preference number: 1 (lower is better)
Translates to: RRGSDYLDKKVPSAQ*PVVERAGPRCSRPW
Trigger: CCATGGCCTTGAGCACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGGCACTGGGCACTTTCTTATCGAGATAGTCACTCCCACGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR GCA 90 bp GCCCATCACGAACCAGACGTGGGAGTGACTATCTCGATAAGAAAGTaGCCAGTGCCCAATGCCCTGTGGTGGAAAGAGCTGGTCCCAGGT +
Preference number: 1 (lower is better)
Translates to: AHHEPDVGVTISIRK*PVPNALWWKELVPG
Trigger: ACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGGCACTGGGCACTTTCTTATCGAGATAGTCACTCCCACGTCTGGTTCGTGATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CCA 90 bp GTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTaGATTCTGAGGCTCGGAAAACTCGGTGGGAACTGCCTTCAACTG +
Preference number: 1 (lower is better)
Translates to: VSHCHLRVGGAVRIS*ILRLGKLGGNCLQL
Trigger: CAGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR CCA 90 bp GTGACTATCTCGATAAGAAAGTGCCCAGTGCCCAATGCCCTGTGGTaGAAAGAGCTGGTCCCAGGTGCTCAAGGCCATGGGCCCCATTTG +
Preference number: 1 (lower is better)
Translates to: VTISIRKCPVPNALW*KELVPGAQGHGPHL
Trigger: CAAATGGGGCCCATGGCCTTGAGCACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGGCACTGGGCACTTTCTTATCGAGATAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR TCA 90 bp TATGGACCTCTGTCCTTGGCTGTGTTGAATTCCTTCCCGGCCAGCTaGCTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCT +
Preference number: 1 (lower is better)
Translates to: YGPLSLAVLNSFPAS*LDLGTQWLYVLRVA
Trigger: AGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCCGGGAAGGAATTCAACACAGCCAAGGACAGAGGTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
3UTR GCA 90 bp AGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCATTCTCTaGCTGACCTCTGTGTTACTCCTTAGTGAACAAGAAACCCAGAGA +
Preference number: 1 (lower is better)
Translates to: RGLSLRSLACETPIL*LTSVLLLSEQETQR
Trigger: TCTCTGGGTTTCTTGTTCACTAAGGAGTAACACAGAGGTCAGGCAGAGAATGGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CCA 90 bp CAACACAGGGTGTCCTGTCTACTGTTGGGTAGCATGGGAAGGGCCTaGCCTCAGGGTGAAGGTTCCCATTGCATGTTTTCCAGGTGCTTC +
Preference number: 1 (lower is better)
Translates to: QHRVSCLLLGSMGRA*PQGEGSHCMFSRCF
Trigger: GAAGCACCTGGAAAACATGCAATGGGAACCTTCACCCTGAGGCCAGGCCCTTCCCATGCTACCCAACAGTAGACAGGACACCCTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
3UTR GCA 90 bp ATAACTCAGAGCCAGATGCCTTCTGGAAGCAGTCTCCATGGATTCTaGCCTAAAACCAGGAATGGAAGATGGAGCTGCCACCGGCTGATG +
Preference number: 1 (lower is better)
Translates to: ITQSQMPSGSSLHGF*PKTRNGRWSCHRLM
Trigger: CATCAGCCGGTGGCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGGAGACTGCTTCCAGAAGGCATCTGGCTCTGAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR CCA 90 bp CATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATaGACCTCTGTCCTTGGCTGTGTTGAATTCCTTCCCGGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: HKRSAKSHEHPPVII*TSVLGCVEFLPGQL
Trigger: CAGCTGGCCGGGAAGGAATTCAACACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
3UTR GCA 90 bp TTAGTGAACAAGAAACCCAGAGAGAAGAGAAGCCCAAGACCAATGTaGCGACCTTGGCTTCCAGGAGAACAGAGCCTTGGTCCTAACCAT +
Preference number: 1 (lower is better)
Translates to: LVNKKPREKRSPRPM*RPWLPGEQSLGPNH
Trigger: ATGGTTAGGACCAAGGCTCTGTTCTCCTGGAAGCCAAGGTCGGCACATTGGTCTTGGGCTTCTCTTCTCTCTGGGTTTCTTGTTCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR TCA 90 bp CCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATaGATTTCTACAAAACAGACCACACACAGATTGTCCCAGTGTAAA +
Preference number: 1 (lower is better)
Translates to: PRKASPVHASTLLCG*ISTKQTTHRLSQCK
Trigger: TTTACACTGGGACAATCTGTGTGTGGTCTGTTTTGTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431632.5
3UTR-3UTR TCA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCGGGCTGTCACGGGGCTaGGCCTGGCTCGAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGGLSRG*AWLEEA
Trigger: GGCTTCCTCGAGCCAGGCTCAGCCCCGTGACAGCCC...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR CCA 90 bp GGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACAAGGCCGGGCAGGCCCTaGCGTCTGGCTCCTGTAGCC +
Preference number: 2 (lower is better)
Translates to: GIRAGRRGGPWHLLSWETRPGRP*RLAPVA
Trigger: GGCTACAGGAGCCAGACGCCAGGGCCTGCCCGGCCT...TGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp TGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCCCATGGCAGGGCAGGCCTGGCCCCGATaGGCTCAGGCACACCTGGCG +
Preference number: 2 (lower is better)
Translates to: WPPSLPQAVLALKDPMAGQAWPR*AQAHLA
Trigger: CGCCAGGTGTGCCTGAGCCCATCGGGGCCAGGCCTG...CCCTGCCATGGGGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR CCA 90 bp GCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGCTCCACCGGCCTATCTaGGGGGCTCTGGGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: APCGQWPPSLPQAVLALKLHRPI*GALGAQ
Trigger: CTGGGCACCCAGAGCCCCCCAGATAGGCCGGTGGAG...CTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR CCA 90 bp CACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCGCCCCTTGTGGGCAGTaGCCACCATCCCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: HQAPCGQWPPSLPQAVLAAPCGQ*PPSLPQ
Trigger: CTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGC...GGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR TCA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCGCACCAGTACGTGGGTaGGTACGTGGGCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGAPVRG*VRGPST
Trigger: TGTGCTGGGCCCACGTACTCACCCACGTACTGGTGC...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442216.1
3UTR-3UTR GCA 90 bp GTGAGGTCTGAGGAGGAGACGTTGGCGGGCGCACCCCTGTGCAGCCTCATACTCTGCCAGCCGGCTGGATaGGGGAGGCTGGCGTGGAAG +
Preference number: 2 (lower is better)
Translates to: VRSEEETLAGAPLCSLILCQPAG*GRLAWK
Trigger: CTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCA...GAGTATGAGGCTGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGACCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR-3UTR CCA 90 bp CTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCCCGGGCACCAGTACGTaGGTGAGTACGTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: LVGSGHHPSLRLSWPSRTPGTST*VSTWAQ
Trigger: CTGGGCCCACGTACTCACCCACGTACTGGTGCCCGG...GGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442216.1
3UTR-3UTR CCA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCGGGCTCAGGCACACCTaGCGACATCAGAAATGGGGC +
Preference number: 2 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGGLRHT*RHQKWG
Trigger: GCCCCATTTCTGATGTCGCCAGGTGTGCCTGAGCCC...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR CCA 90 bp CCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTGCTATGAGTCTGTCCTaGGACCCGTTCCCACCAGGC +
Preference number: 2 (lower is better)
Translates to: PGPLWAVATIPPSGCPGPAMSLS*DPFPPG
Trigger: GCCTGGTGGGAACGGGTCCCAGGACAGACTCATAGC...AGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR GCA 90 bp CAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCTGGCCTCCACTGTGCTaGCATCTCTTGGGAACAGGG +
Preference number: 2 (lower is better)
Translates to: QAPCGQWPPSLPQAVLALWPPLC*HLLGTG
Trigger: CCCTGTTCCCAAGAGATGGCAGCACAGTGGAGGCCA...GAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR GCA 90 bp CCCGGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCACGGCCGGCCAATGCTaGTCCCCACCCAACCCCACC +
Preference number: 2 (lower is better)
Translates to: PGQLTGPRNTVAVCAESGTAGQC*SPPNPT
Trigger: GGTGGGGTTGGGTGGGGAGCAGCATTGGCCGGCCGT...GCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp CTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCCTGCCTTGCCGGATGTaGTGGCCACTGGAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: LVGSGHHPSLRLSWPSRTLPCRM*WPLEGS
Trigger: ACTGCCCTCCAGTGGCCACCACATCCGGCAAGGCAG...GGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp CCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTTCAGAAATGGGGCCCTaGAGTCCAGACCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: PGPLWAVATIPPSGCPGPSEMGP*SPDHRP
Trigger: TGGCCTGTGGTCTGGACTCCAGGGCCCCATTTCTGA...AGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR CCA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCGGGCCTTTTCCACCATaGCCTCCACTGTGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGGPFPP*PPLCCH
Trigger: ATGGCAGCACAGTGGAGGCCATGGTGGAAAAGGCCC...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR CCA 90 bp CACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCCCTCAAGGACCCCATaGCAGGGCCTTTTCCACCAT +
Preference number: 2 (lower is better)
Translates to: HQAPCGQWPPSLPQAVLAPSRTP*QGLFHH
Trigger: ATGGTGGAAAAGGCCCTGCCATGGGGTCCTTGAGGG...GGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR GCA 90 bp CTCACCTTCCTCTCCCGGTCGACCCGCGAGATCGCTCTGGGAGAAGTATTGCCAGCGGACCCCCGTAGCTaGCCCATCCTCTCCTCGCGT +
Preference number: 2 (lower is better)
Translates to: LTFLSRSTREIALGEVLPADPRS*PILSSR
Trigger: ACGCGAGGAGAGGATGGGGCAGCTACGGGGGTCCGC...TGGCAATACTTCTCCCAGAGCGATCTCGCGGGTCGACCGGGAGAGGAAGGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR-3UTR CCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACTCATCTCAGAGTGGGTaGGGCTGTGCGTATCTCCTG +
Preference number: 2 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNSSQSG*GCAYLL
Trigger: CAGGAGATACGCACAGCCCCACCCACTCTGAGATGA...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR TCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACGGAACTGCCTTCAACTaGCTACACCACTCCCTGATG +
Preference number: 2 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNGTAFN*LHHSLM
Trigger: CATCAGGGAGTGGTGTAGTCAGTTGAAGGCAGTTCC...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR TCA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGAGTGGCTGTATGTGCTaGGAGTGGCTTCCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVSGCMC*EWLPGP
Trigger: GGGGCCTGGAAGCCACTCTCAGCACATACAGCCACT...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR GCA 90 bp GCTGAAAAGGGCAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCATCCCAGCACCCCGGTaGAGCCAACAACACAGGGTG +
Preference number: 2 (lower is better)
Translates to: AEKGNRGLSLRSLACETPIPAPR*SQQHRV
Trigger: CACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGAT...GGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTGCCCTTTTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp GCCGTGGCATTGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCTCTGCCCAGGCCTGGCCCCGATaGGCTCAGGCACACCTGGCG +
Preference number: 2 (lower is better)
Translates to: AVALSQRLAKDKAVGASAQAWPR*AQAHLA
Trigger: CGCCAGGTGTGCCTGAGCCCATCGGGGCCAGGCCTG...GGCAGAGGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR TCA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGTTACCAGTACGTGGGTaGGTACGTGGGCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVLPVRG*VRGPST
Trigger: TGTGCTGGGCCCACGTACTCACCCACGTACTGGTAA...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp GGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACAACTGTCATCTCAGAGTaGGTGGGGCTGTGCGTATCT +
Preference number: 2 (lower is better)
Translates to: GIRAGRRGGPWHLLSWETTVISE*VGLCVS
Trigger: AGATACGCACAGCCCCACCCACTCTGAGATGACAGT...TGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp CACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTCCTTGCCGGATGTGGTaGCCACTGGAGGGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: HRSQHPGAANNTGCPVYCPCRMW*PLEGSG
Trigger: GCCACTGCCCTCCAGTGGCCACCACATCCGGCAAGG...ACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR TCA 90 bp CGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGCTCCCTGATGATGCTTaGGGGCCGGCTTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: REVSHCHLRVGGAVRISWLPDDA*GPALAL
Trigger: CAGAGCCAAAGCCGGCCCTCAAGCATCATCAGGGAG...CCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR GCA 90 bp GCTGAAAAGGGCAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCAGCCCAAGACCAATGTaGCGACCTTGGCTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: AEKGNRGLSLRSLACETPSPRPM*RPWLPG
Trigger: TCCTGGAAGCCAAGGTCGGCACATTGGTCTTGGGCT...GGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTGCCCTTTTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp AGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACCGCCATGGACAGCTTaGTTCCTGGGCCTGAGATCC +
Preference number: 2 (lower is better)
Translates to: SLVPGPEIRGRPALFMPPPPWTA*FLGLRS
Trigger: GGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGG...TGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
3UTR-3UTR CCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATTGGCAGCCTGAAGGTTaGGGGCAGCGGGCACCACAA +
Preference number: 2 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHWQPEG*GQRAPQ
Trigger: TTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCCA...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp CAGGTCAATACATCCACACACACACACACACACACACACGCAGGGGACGCCGGCTCCCCACCCACTCCATaGAGAGGCAGAGGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: QVNTSTHTHTHTHAGDAGSPPTP*RGRGGA
Trigger: GGCTCCTCCTCTGCCTCTCCATGGAGTGGGTGGGGA...GCCGGCGTCCCCTGCGTGTGTGTGTGTGTGTGTGTGTGTGGATGTATTGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGATGAGCCACCAGGCCTaGCCGACATTTCCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVMSHQA*PTFPVL
Trigger: CAAGACTGGAAATGTCGGCCAGGCCTGGTGGCTCAT...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR GCA 90 bp CCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCGGCCAGCCCTGTTCATaGCTCCACTCTCTTGTGTGG +
Preference number: 2 (lower is better)
Translates to: PQISAQPAMDSLVPGPEIGQPCS*LHSLVW
Trigger: CCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCC...GATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
3UTR-3UTR CCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTGGCTCCTGTAGCCTaGTGTTGTCAGGGGAGCATC +
Preference number: 2 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYLAPVA*CCQGSI
Trigger: GATGCTCCCCTGACAACACCAGGCTACAGGAGCCAG...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCAGGCCGGGCAGGCCCTaGCGTCTGGCTCCTGTAGCC +
Preference number: 2 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSRPGRP*RLAPVA
Trigger: GGCTACAGGAGCCAGACGCCAGGGCCTGCCCGGCCT...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp TTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAATGAGCCACCAGGCCTaGCCGACATTTCCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: FQAPGIHRSQHPGAANNTMSHQA*PTFPVL
Trigger: CAAGACTGGAAATGTCGGCCAGGCCTGGTGGCTCAT...TGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR CCA 90 bp AGCACAGCTGAGGCTCAGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGACTCCACCGGCCTATCTaGGGGGCTCTGGGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: STAEAQPLALTGQVANFGLHRPI*GALGAQ
Trigger: CTGGGCACCCAGAGCCCCCCAGATAGGCCGGTGGAG...TCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCTGAGCCTCAGCTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR TCA 90 bp CCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTCTGGTCTTAAACTCCTaGCCTCAAGTCATCCGCCCT +
Preference number: 2 (lower is better)
Translates to: PGIHRSQHPGAANNTGCPLVLNS*PQVIRP
Trigger: AGGGCGGATGACTTGAGGTCAGGAGTTTAAGACCAG...AGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR GCA 90 bp TTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACATGCATGTTTTCCAGGTaGTTCTGCCAGGGGACTGCT +
Preference number: 2 (lower is better)
Translates to: FQAPGIHRSQHPGAANNTCMFSR*FCQGTA
Trigger: AGCAGTCCCCTGGCAGAAGCACCTGGAAAACATGCA...TGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
3UTR-3UTR CCA 90 bp CAGGTCAATACATCCACACACACACACACACACACACACGCAGGGGACGCCGGCAGGCCAGGGGGACAATaGAAAAGCCCAGCACGGGAA +
Preference number: 2 (lower is better)
Translates to: QVNTSTHTHTHTHAGDAGRPGGQ*KSPARE
Trigger: TTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCT...GCCGGCGTCCCCTGCGTGTGTGTGTGTGTGTGTGTGTGTGGATGTATTGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp GGAAGCAGTCTCCATGGATTCTGCCCTAAAACCAGGAATGGAAGATGGAGCTGCAGGCGGGGCGGGCCGTaGCACCTGCTGTCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: GSSLHGFCPKTRNGRWSCRRGGP*HLLSWE
Trigger: TTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCT...GCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGGAGACTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCAGGCGGGGCGGGCCGTaGCACCTGCTGTCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSRRGGP*HLLSWE
Trigger: TTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCT...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp TTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACATGCTCCTGGCCTGGTTaGAAAAGAGATCTTGCTGGC +
Preference number: 2 (lower is better)
Translates to: FQAPGIHRSQHPGAANNTCSWPG*KRDLAG
Trigger: GCCAGCAAGATCTCTTTTCCAACCAGGCCAGGAGCA...TGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR CCA 90 bp CTGGTTCAACACAGAGGCCGCCAACGGGGTCTAGCTATGAGTCTGTCCTGGGACTGGCGACATCAGAAATaGGGCCCTGGAGTCCAGACC +
Preference number: 2 (lower is better)
Translates to: LVQHRGRQRGLAMSLSWDWRHQK*GPGVQT
Trigger: GGTCTGGACTCCAGGGCCCCATTTCTGATGTCGCCA...GTCCCAGGACAGACTCATAGCTAGACCCCGTTGGCGGCCTCTGTGTTGAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR CCA 90 bp CTGGTTCAACACAGAGGCCGCCAACGGGGTCTAGCTATGAGTCTGTCCTGGGACCAGATTCCAGAGCTCTaGGTACGGCCGGCCAATGCT +
Preference number: 2 (lower is better)
Translates to: LVQHRGRQRGLAMSLSWDQIPEL*VRPANA
Trigger: AGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTG...GTCCCAGGACAGACTCATAGCTAGACCCCGTTGGCGGCCTCTGTGTTGAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CAA 90 bp AGGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGGCATaGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: RGLLEVVQLTTVAVA*SQRLAKDKAVGASA
Trigger: GGCAGAGGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR TCA 90 bp TGCTTGAGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGAAGAATCCTCAGTGCTaGGGGCATCTCATCTTCTTG +
Preference number: 2 (lower is better)
Translates to: CLRAGFGSGTCHFSDTDPKNPQC*GHLIFL
Trigger: CAAGAAGATGAGATGCCCTCAGCACTGAGGATTCTT...CGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR GCA 90 bp CTGGTTCAACACAGAGGCCGCCAACGGGGTCTAGCTATGAGTCTGTCCTGGGACCCATGGCCTCCACTGTaGTGCCATCTCTTGGGAACA +
Preference number: 2 (lower is better)
Translates to: LVQHRGRQRGLAMSLSWDPWPPL*CHLLGT
Trigger: TGTTCCCAAGAGATGGCAGCACAGTGGAGGCCATGG...GTCCCAGGACAGACTCATAGCTAGACCCCGTTGGCGGCCTCTGTGTTGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR CCA 90 bp CATTCTTGCAGTTGTGCTGAGCTGGAGGGCCAAGCCCATCACGAACCAGACGTGCTGCCAGGGGACTGCTaGAGGTGGTTCAGCTCACTA +
Preference number: 2 (lower is better)
Translates to: HSCSCAELEGQAHHEPDVLPGDC*RWFSSL
Trigger: TAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAG...CACGTCTGGTTCGTGATGGGCTTGGCCCTCCAGCTCAGCACAACTGCAAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CAA 90 bp GATGTCCACAGAACGTTCTGGATGAAGGAAATGGTCCCATCTGCCTaGCCGGATGTGGTGGCCACTGGAGGGCAGTGGCATGATCTCAGC +
Preference number: 2 (lower is better)
Translates to: DVHRTFWMKEMVPSA*PDVVATGGQWHDLS
Trigger: GCTGAGATCATGCCACTGCCCTCCAGTGGCCACCACATCCGGCAAGGCAGATGGGACCATTTCCTTCATCCAGAACGTTCTGTGGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR CAA 90 bp ATGGCAGGGCCTTTTCCACCATGGCCTCCACTGTGCTGCCATCTCTaGGGAACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCA +
Preference number: 2 (lower is better)
Translates to: MAGPFPPWPPLCCHL*GTGGHPILPRNTSS
Trigger: TGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGTTCCCAAGAGATGGCAGCACAGTGGAGGCCATGGTGGAAAAGGCCCTGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR TCA 90 bp CAGGTCAATACATCCACACACACACACACACACACACACGCAGGGGACGCCGGCGTATCTCCTGGATTCTaGGGCTCGGAAAACTCGGTG +
Preference number: 2 (lower is better)
Translates to: QVNTSTHTHTHTHAGDAGVSPGF*GSENSV
Trigger: CACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATAC...GCCGGCGTCCCCTGCGTGTGTGTGTGTGTGTGTGTGTGTGGATGTATTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR TCA 90 bp TCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTCTGGTCTTAAACTCCTaGCCTCAAGTCATCCGCCCT +
Preference number: 2 (lower is better)
Translates to: STDPSTPVQPTTQGVLSTLVLNS*PQVIRP
Trigger: AGGGCGGATGACTTGAGGTCAGGAGTTTAAGACCAG...AGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR GCA 90 bp AGGCCCAGCACGCTAGGAGATCCATCTTCATGTGACAGAAACGGATTCTCTCCCCCACCCCCAAATATCTaGCCAGCCCGCCATGGACAG +
Preference number: 2 (lower is better)
Translates to: RPSTLGDPSSCDRNGFSPPPPNI*PARHGQ
Trigger: CTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGG...GGGAGAGAATCCGTTTCTGTCACATGAAGATGGATCTCCTAGCGTGCTGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
3UTR-3UTR GCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCGCGGGCCGTGGCACCTaGTGTCTTGGGAAACACAGG +
Preference number: 2 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSAGRGT*CLGKHR
Trigger: CCTGTGTTTCCCAAGACAGCAGGTGCCACGGCCCGC...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR GCA 90 bp GCCTGGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTTGTGAGACTCCATAAGGGTACGGCCGGCCAATaGTGCTCCCCACCCAACCCC +
Preference number: 2 (lower is better)
Translates to: AWLEKRSCWLDSLVRLHKGTAGQ*CSPPNP
Trigger: GGGGTTGGGTGGGGAGCAGCATTGGCCGGCCGTACC...CTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCTGGCAGCCTGAAGGTTaGGGGCAGCGGGCACCACAA +
Preference number: 2 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSWQPEG*GQRAPQ
Trigger: TTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCCA...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR GCA 90 bp AGAGCTGGTCCCAGGTGCTCAAGGCCATGGGCCCCATTTGGAGCCAGAAGGTCTGGTGAAGGTTCCCATTaGATGTTTTCCAGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: RAGPRCSRPWAPFGARRSGEGSH*MFSRCF
Trigger: GAAGCACCTGGAAAACATGCAATGGGAACCTTCACC...AGACCTTCTGGCTCCAAATGGGGCCCATGGCCTTGAGCACCTGGGACCAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp GCGTATCTCCTGGATTCTGAGGCTCGGAAAACTCGGTGGGAACTGCCTTCAACTCTGGCTCCTGTAGCCTaGTGTTGTCAGGGGAGCATC +
Preference number: 2 (lower is better)
Translates to: AYLLDSEARKTRWELPSTLAPVA*CCQGSI
Trigger: GATGCTCCCCTGACAACACCAGGCTACAGGAGCCAG...AGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp GCCTGGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTTGTGAGACTCCATAAGCCTTGCCGGATGTGGTaGCCACTGGAGGGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: AWLEKRSCWLDSLVRLHKPCRMW*PLEGSG
Trigger: GCCACTGCCCTCCAGTGGCCACCACATCCGGCAAGG...CTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR CCA 90 bp CCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCTCAAGTGGCAAATTTTaGAAAAGCCAGACCTCAGAG +
Preference number: 2 (lower is better)
Translates to: PQGSTDPSTPVQPTTQGVSSGKF*KSQTSE
Trigger: CTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGA...GACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp ACAGTGGCCGTGGCATTGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCATCCTTACCAGTACGTaGGTGAGTACGTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: TVAVALSQRLAKDKAVGAILTST*VSTWAQ
Trigger: CTGGGCCCACGTACTCACCCACGTACTGGTAAGGAT...GGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGCCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR TCA 90 bp CCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGACTCTCTTGTGTGGATaGATTTCTACAAAACAGACC +
Preference number: 2 (lower is better)
Translates to: PTPKYLPSPPWTAWFLGLTLLCG*ISTKQT
Trigger: GGTCTGTTTTGTAGAAATTCATCCACACAAGAGAGT...CAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431632.5
3UTR-3UTR TCA 90 bp GCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTGCAGTTGGGCTGTCACGGGGCTaGGCCTGGCTCGAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: ATILDSVRLENTKSILAVGLSRG*AWLEEA
Trigger: GGCTTCCTCGAGCCAGGCTCAGCCCCGTGACAGCCC...AACTGCAAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR TCA 90 bp AGAGAAGAGAAGCCCAAGACCAATGTGCCGACCTTGGCTTCCAGGAGAACAGAGGACAAAAAGCACAGCTaGGGCTCAGCCTCTTGCGCT +
Preference number: 2 (lower is better)
Translates to: REEKPKTNVPTLASRRTEDKKHS*GSASCA
Trigger: AGCGCAAGAGGCTGAGCCTCAGCTGTGCTTTTTGTC...CTCTGTTCTCCTGGAAGCCAAGGTCGGCACATTGGTCTTGGGCTTCTCTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR GCA 90 bp TCACGAACCAGACGTGGGAGTGACTATCTCGATAAGAAAGTGCCCAGTGCCCAAGGAAATGGTCCCATCTaGCTTGCCGGATGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: SRTRRGSDYLDKKVPSAQGNGPI*LAGCGG
Trigger: GCCACCACATCCGGCAAGGCAGATGGGACCATTTCC...TTGGGCACTGGGCACTTTCTTATCGAGATAGTCACTCCCACGTCTGGTTCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp TCAAGGCCATGGGCCCCATTTGGAGCCAGAAGGTCTAGGGTGAAGTCAGAGAAGGAGGTGCTCCTGGCCTaGTTGGAAAAGAGATCTTGC +
Preference number: 2 (lower is better)
Translates to: SRPWAPFGARRSRVKSEKEVLLA*LEKRSC
Trigger: GCAAGATCTCTTTTCCAACCAGGCCAGGAGCACCTC...CTTCTCTGACTTCACCCTAGACCTTCTGGCTCCAAATGGGGCCCATGGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp TCACGAACCAGACGTGGGAGTGACTATCTCGATAAGAAAGTGCCCAGTGCCCAACCCTCAAGGACCCCATaGCAGGGCCTTTTCCACCAT +
Preference number: 2 (lower is better)
Translates to: SRTRRGSDYLDKKVPSAQPSRTP*QGLFHH
Trigger: ATGGTGGAAAAGGCCCTGCCATGGGGTCCTTGAGGG...TTGGGCACTGGGCACTTTCTTATCGAGATAGTCACTCCCACGTCTGGTTCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCACCAGGAATGGAAGATaGAGCTGCCACCGGCTGATG +
Preference number: 2 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSTRNGR*SCHRLM
Trigger: CATCAGCCGGTGGCAGCTCCATCTTCCATTCCTGGT...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCGCTCGGAAAACTCGGTaGGAACTGCCTTCAACTGAC +
Preference number: 2 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSARKTR*ELPSTD
Trigger: GTCAGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGC...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp CACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTGAAAAGAGATCTTGCTaGCTAGACAGTCTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: HRSQHPGAANNTGCPVYCEKRSC*LDSLVR
Trigger: TCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTC...ACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR CCA 90 bp GCCAATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTACACTTCCTCAGGCCTaGCCCCGATGGGCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: ANGYHLGQCPSREYKIHSTLPQA*PRWAQA
Trigger: TGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGT...AGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR TCA 90 bp GCGTATCTCCTGGATTCTGAGGCTCGGAAAACTCGGTGGGAACTGCCTTCAACTAAGAATCCTCAGTGCTaGGGGCATCTCATCTTCTTG +
Preference number: 2 (lower is better)
Translates to: AYLLDSEARKTRWELPSTKNPQC*GHLIFL
Trigger: CAAGAAGATGAGATGCCCTCAGCACTGAGGATTCTT...AGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CCA 90 bp AACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTGGGGACTGCTGGAGGTaGTTCAGCTCACTACAGTGG +
Preference number: 2 (lower is better)
Translates to: NIKGQQSHTSIHPSSYGPGDCWR*FSSLQW
Trigger: CCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCC...AGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
3UTR-3UTR TCA 90 bp ATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTGCACTGAGGGCCCTGCCATaGAAGAGGCACACCAGGATG +
Preference number: 2 (lower is better)
Translates to: MATILDSVRLENTKSILALRALP*KRHTRM
Trigger: CATCCTGGTGTGCCTCTTTCATGGCAGGGCCCTCAG...TGCAAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR GCA 90 bp AGCACGCTAGGAGATCCATCTTCATGTGACAGAAACGGATTCTCTCCCTTCTCTATTCTCTCCCTTCTCTaGCCTCCTGGTGAGCATCTC +
Preference number: 2 (lower is better)
Translates to: STLGDPSSCDRNGFSPFSILSLL*PPGEHL
Trigger: GAGATGCTCACCAGGAGGGCAGAGAAGGGAGAGAAT...AGAGAAGGGAGAGAATCCGTTTCTGTCACATGAAGATGGATCTCCTAGCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
3UTR-3UTR CCA 90 bp ATGTGCCGACCTTGGCTTCCAGGAGAACAGAGCCTTGGTCCTAACCATCTAGCACGCTCACTGGTCAAGTaGCAAATTTTGGAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: MCRPWLPGEQSLGPNHLARSLVK*QILEKP
Trigger: TGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCG...TGCTAGATGGTTAGGACCAAGGCTCTGTTCTCCTGGAAGCCAAGGTCGGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp GCCTGGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTTGTGAGACTCCATAAGGCCTCTTGCGCTCACTaGTCAAGTGGCAAATTTTGG +
Preference number: 2 (lower is better)
Translates to: AWLEKRSCWLDSLVRLHKASCAH*SSGKFW
Trigger: CCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGC...CTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR TCA 90 bp ATAGAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATTGTCCTTGGCTGTGTTaGATTCCTTCCCGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: IENIKGQQSHTSIHPSSYCPWLC*IPSRPA
Trigger: AGCTGGCCGGGAAGGAATTCAACACAGCCAAGGACA...ATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
3UTR-3UTR CCA 90 bp CCAATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTAGCCTCCCAAGCAGCTaGGATTACAGGAACACACCA +
Preference number: 2 (lower is better)
Translates to: PMATILDSVRLENTKSILSLPSS*DYRNTP
Trigger: TGGTGTGTTCCTGTAATCCCAGCTGCTTGGGAGGCT...AAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp TGTTTAATGAGTTCTGGTTCAACACAGAGGCCGCCAACGGGGTCTAGCTATGAGGAAAAGAGATCTTGCTaGCTAGACAGTCTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: CLMSSGSTQRPPTGSSYEEKRSC*LDSLVR
Trigger: TCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTC...CTCATAGCTAGACCCCGTTGGCGGCCTCTGTGTTGAACCAGAACTCATTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CCA 90 bp ATAGAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATTGCTCCTGGCCTGGTTaGAAAAGAGATCTTGCTGGC +
Preference number: 2 (lower is better)
Translates to: IENIKGQQSHTSIHPSSYCSWPG*KRDLAG
Trigger: GCCAGCAAGATCTCTTTTCCAACCAGGCCAGGAGCA...ATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405675.7
3UTR CAA 90 bp TTTAATTCATTAAAAATGTGTCGCATGTGGCCAATGGCTACCATCTaGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTGCAGTT +
Preference number: 2 (lower is better)
Translates to: FNSLKMCRMWPMATI*DSVRLENTKSILAV
Trigger: AACTGCAAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCATTGGCCACATGCGACACATTTTTAATGAATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CCA 72 bp TGGAAGCCACGGGCTCGGCGGCACTGCGGAGCCGGTTaGCAGTGGCCCCCGTGGGTGGGCCAGGGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: WKPRARRHCGAG*QWPPWVGQGAG
Trigger: CCCTGCCCCCTGGCCCACCCACGGGGGCCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCGTGGCTTCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR GCA 72 bp CCAGGGGGCAGGGCTCGGGTCGCGGACCCCCGTAGCTaGCCCATCCTCTCCTCGCGTTCGTGTTCTCGCCGC +
Preference number: 3 (lower is better)
Translates to: PGGRARVADPRS*PILSSRSCSRR
Trigger: GCGGCGAGAACACGAACGCGAGGAGAGGATGGGGCAGCTACGGGGGTCCGCGACCCGAGCCCTGCCCCCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR CCA 72 bp GGGAGAAGTATTGCCAGCCGGCTGGATGCGGGAGGCTaGCGTGGAAGCCACGGGCTCGGCGGCACTGCGGAG +
Preference number: 3 (lower is better)
Translates to: GRSIASRLDAGG*RGSHGLGGTAE
Trigger: CTCCGCAGTGCCGCCGAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATACTTCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR TCA 72 bp GTGAGGCTGGGATCCGGGAGACCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACGTTGGCGGGCGCACCCC +
Preference number: 3 (lower is better)
Translates to: VRLGSGRPLAAQ*GLRRRRWRAHP
Trigger: GGGGTGCGCCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGATCCCAGCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR TCA 72 bp TGGGATCCGGGAGACCTCTTGCCGCCCAGTGAGGTCTaGGGAGGAGACGTTGGCGGGCGCACCCCTGTGCAG +
Preference number: 3 (lower is better)
Translates to: WDPGDLLPPSEV*GGDVGGRTPVQ
Trigger: CTGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGATCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR CCA 72 bp GTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTaGCCCTCAAGGACCCCATGGCAGGGCCTTTTCCAC +
Preference number: 3 (lower is better)
Translates to: VGSGHHPSLRLS*PSRTPWQGLFH
Trigger: GTGGAAAAGGCCCTGCCATGGGGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR TCA 72 bp TGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTaGGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCC +
Preference number: 3 (lower is better)
Translates to: CPARHGQLGSWA*DPRKASPVHAS
Trigger: GGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
3UTR GCA 72 bp AGGTCTGAGGAGGAGACGTTGGCGGGCGCACCCCTGTaGAGCCTCATACTCACCTTCCTCTCCCGGTCGACC +
Preference number: 3 (lower is better)
Translates to: RSEEETLAGAPL*SLILTFLSRST
Trigger: GGTCGACCGGGAGAGGAAGGTGAGTATGAGGCTGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR CCA 72 bp TCACCTTCCTCTCCCGGTCGACCCGCGAGATCGCTCTaGGAGAAGTATTGCCAGCCGGCTGGATGCGGGAGG +
Preference number: 3 (lower is better)
Translates to: SPSSPGRPARSL*EKYCQPAGCGR
Trigger: CCTCCCGCATCCAGCCGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGGTCGACCGGGAGAGGAAGGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
3UTR CCA 72 bp TTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACACCTaGCGACATCAGAAATGGGGCCCTGGAGTCCAGACC +
Preference number: 3 (lower is better)
Translates to: FLRPGPDGLRHT*RHQKWGPGVQT
Trigger: GGTCTGGACTCCAGGGCCCCATTTCTGATGTCGCCAGGTGTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR CCA 72 bp AGAGGCCGCCAACGGGGTCTAGCTATGAGTCTGTCCTaGGACCCGTTCCCACCAGGCCCCTTGTGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: RGRQRGLAMSLS*DPFPPGPLWAV
Trigger: CACTGCCCACAAGGGGCCTGGTGGGAACGGGTCCCAGGACAGACTCATAGCTAGACCCCGTTGGCGGCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR CCA 72 bp ACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTaGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: TPKYLPSPPWTA*FLGLRSEEGQP
Trigger: GGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
3UTR CCA 72 bp CTGGCTCCTGTAGCCTGGTGTTGTCAGGGGAGCATCTaGCAGCCTGAAGGTTGGGGGCAGCGGGCACCACAA +
Preference number: 3 (lower is better)
Translates to: LAPVAWCCQGSI*QPEGWGQRAPQ
Trigger: TTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCCAGATGCTCCCCTGACAACACCAGGCTACAGGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR CCA 72 bp CACTCCCTGATGATGCTTGAGGGCCGGCTTTGGCTCTaGGACCTGTCACTTCTCCGACACGGACCCGACCCG +
Preference number: 3 (lower is better)
Translates to: HSLMMLEGRLWL*DLSLLRHGPDP
Trigger: CGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCATCATCAGGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CAA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCCTGTAGCCTGGTGTaGTCAGGGGAGCATCTGGCA +
Preference number: 3 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRSCSLV*SGEHLA
Trigger: TGCCAGATGCTCCCCTGACAACACCAGGCTACAGGA...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CAA 90 bp TGCTTGAGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGTCCTGTAGCCTGGTGTaGTCAGGGGAGCATCTGGCA +
Preference number: 3 (lower is better)
Translates to: CLRAGFGSGTCHFSDTDPSCSLV*SGEHLA
Trigger: TGCCAGATGCTCCCCTGACAACACCAGGCTACAGGA...CGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR-3UTR CAA 90 bp CCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGTGTCCCAGTGTAAAGTaGAGTCCCCCGACGTGTCGG +
Preference number: 3 (lower is better)
Translates to: PTPKYLPSPPWTAWFLGLCPSVK*SPPTCR
Trigger: CCGACACGTCGGGGGACTCAACTTTACACTGGGACA...CAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431632.5
3UTR GCA 72 bp GCCCAATGCCCTGTGGTGGAAAGAGCTGGTCCCAGGTaGTCAAGGCCATGGGCCCCATTTGGAGCCAGAAGG +
Preference number: 3 (lower is better)
Translates to: AQCPVVERAGPR*SRPWAPFGARR
Trigger: CCTTCTGGCTCCAAATGGGGCCCATGGCCTTGAGCACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CCA 72 bp CCTCAGAGGATCCTTACCAGTACGTGGGTGAGTACGTaGGCCCAGCACAGGGACAGGGGCGGGGACAGAAAG +
Preference number: 3 (lower is better)
Translates to: PQRILTSTWVST*AQHRDRGGDRK
Trigger: CTTTCTGTCCCCGCCCCTGTCCCTGTGCTGGGCCCACGTACTCACCCACGTACTGGTAAGGATCCTCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CAA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCGCATTGAGTCAGAGATaGGCAAAGGATAAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGALSQR*AKDKAV
Trigger: CACAGCCTTATCCTTTGCCAATCTCTGACTCAATGC...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR TCA 72 bp GGGAGCCGGGCACCTGAAAGGGACAAAAAGCACAGCTaGGGCTCAGCCTCTTGCGCTCACTGGTCAAGTGGC +
Preference number: 3 (lower is better)
Translates to: GSRAPERDKKHS*GSASCAHWSSG
Trigger: GCCACTTGACCAGTGAGCGCAAGAGGCTGAGCCTCAGCTGTGCTTTTTGTCCCTTTCAGGTGCCCGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR GCA 72 bp CCCATGGCAGGGCCTTTTCCACCATGGCCTCCACTGTaGTGCCATCTCTTGGGAACAGGGGGTCATCCCATC +
Preference number: 3 (lower is better)
Translates to: PMAGPFPPWPPL*CHLLGTGGHPI
Trigger: GATGGGATGACCCCCTGTTCCCAAGAGATGGCAGCACAGTGGAGGCCATGGTGGAAAAGGCCCTGCCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR CCA 72 bp CTACACCACTCCCTGATGATGCTTGAGGGCCGGCTTTaGCTCTGGGACCTGTCACTTCTCCGACACGGACCC +
Preference number: 3 (lower is better)
Translates to: LHHSLMMLEGRL*LWDLSLLRHGP
Trigger: GGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCATCATCAGGGAGTGGTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR CCA 72 bp GTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTaGCCCCGATGGGCTCAGGCACACCTGGCGACATCA +
Preference number: 3 (lower is better)
Translates to: VIPSSQETLPQA*PRWAQAHLATS
Trigger: TGATGTCGCCAGGTGTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
3UTR-3UTR CAA 90 bp CACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCGTTGGAAAAGAGATCTaGCTGGCTAGACAGTCTTGT +
Preference number: 3 (lower is better)
Translates to: HQAPCGQWPPSLPQAVLAVGKEI*LARQSC
Trigger: ACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAAC...GGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CAA 90 bp GCCGTGGCATTGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCTCTGCCATGGTCCCATCTGCCTaGCCGGATGTGGTGGCCACT +
Preference number: 3 (lower is better)
Translates to: AVALSQRLAKDKAVGASAMVPSA*PDVVAT
Trigger: AGTGGCCACCACATCCGGCAAGGCAGATGGGACCAT...GGCAGAGGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR CAA 90 bp ACAGTGGCCGTGGCATTGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCATGGTCCCATCTGCCTaGCCGGATGTGGTGGCCACT +
Preference number: 3 (lower is better)
Translates to: TVAVALSQRLAKDKAVGAMVPSA*PDVVAT
Trigger: AGTGGCCACCACATCCGGCAAGGCAGATGGGACCAT...GGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGCCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR-3UTR CAA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGGCATTGAGTCAGAGATaGGCAAAGGATAAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVALSQR*AKDKAV
Trigger: CACAGCCTTATCCTTTGCCAATCTCTGACTCAATGC...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR TCA 72 bp GGCCATGGGCCCCATTTGGAGCCAGAAGGTCTAGGGTaGAGTCAGAGAAGACGTCCCCTGCCCATATCCCAT +
Preference number: 3 (lower is better)
Translates to: GHGPHLEPEGLG*SQRRRPLPISH
Trigger: ATGGGATATGGGCAGGGGACGTCTTCTCTGACTTCACCCTAGACCTTCTGGCTCCAAATGGGGCCCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR GCA 72 bp CCACAGAACGTTCTGGATGAAGGAAATGGTCCCATCTaGCTTGCCGGATGTGGTGGCCACTGGAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: PQNVLDEGNGPI*LAGCGGHWRAV
Trigger: CACTGCCCTCCAGTGGCCACCACATCCGGCAAGGCAGATGGGACCATTTCCTTCATCCAGAACGTTCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR CCA 72 bp TCGATAAGAAAGTGCCCAGTGCCCAATGCCCTGTGGTaGAAAGAGCTGGTCCCAGGTGCTCAAGGCCATGGG +
Preference number: 3 (lower is better)
Translates to: SIRKCPVPNALW*KELVPGAQGHG
Trigger: CCCATGGCCTTGAGCACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGGCACTGGGCACTTTCTTATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR TCA 72 bp TCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGATTCTaGGGCTCGGAAAACTCGGTGGGAACTGCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: SEWVGLCVSPGF*GSENSVGTAFN
Trigger: GTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGCACAGCCCCACCCACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR TCA 72 bp TGCCTTCAACTGACTACACCACTCCCTGATGATGCTTaGGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCT +
Preference number: 3 (lower is better)
Translates to: CLQLTTPLPDDA*GPALALGPVTS
Trigger: AGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCATCATCAGGGAGTGGTGTAGTCAGTTGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR GCA 72 bp GGTGAAGGTTCCCATTGCATGTTTTCCAGGTGCTTCTaGCAGGGGACTGCTGGAGGTGGTTCAGCTCACTAC +
Preference number: 3 (lower is better)
Translates to: GEGSHCMFSRCF*QGTAGGGSAHY
Trigger: GTAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAGCACCTGGAAAACATGCAATGGGAACCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
3UTR CCA 72 bp AGACCAGCAGCAGTGGGTGGAGAGGTGCTCCTGGCCTaGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTT +
Preference number: 3 (lower is better)
Translates to: RPAAVGGEVLLA*LEKRSCWLDSL
Trigger: AAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGCCAGGAGCACCTCTCCACCCACTGCTGCTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR CCA 72 bp GTGTCCTGTCTACTGTTGGGTAGCATGGGAAGGGCCTaGCCTCAGGGTGAAGGTTCCCATTGCATGTTTTCC +
Preference number: 3 (lower is better)
Translates to: VSCLLLGSMGRA*PQGEGSHCMFS
Trigger: GGAAAACATGCAATGGGAACCTTCACCCTGAGGCCAGGCCCTTCCCATGCTACCCAACAGTAGACAGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
3UTR CCA 72 bp ATCTCGATAAGAAAGTGCCCAGTGCCCAATGCCCTGTaGTGGAAAGAGCTGGTCCCAGGTGCTCAAGGCCAT +
Preference number: 3 (lower is better)
Translates to: ISIRKCPVPNAL*WKELVPGAQGH
Trigger: ATGGCCTTGAGCACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGGCACTGGGCACTTTCTTATCGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR TCA 72 bp CAGCGGGCACCACAAGGGGGCAAGAATCCTCAGTGCTaGGGGCATCTCATCTTCTTGCCATTGGCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: QRAPQGGKNPQC*GHLIFLPLAKK
Trigger: TTTCTTTGCCAATGGCAAGAAGATGAGATGCCCTCAGCACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR TCA 72 bp TGGAGGTGGTTCAGCTCACTACAGTGGCCGTGGCATTaGGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTG +
Preference number: 3 (lower is better)
Translates to: WRWFSSLQWPWH*VRDWQRIRLWV
Trigger: CACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGCCACTGTAGTGAGCTGAACCACCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR GCA 72 bp TCCCTGAGGTCCCTAGCCTGCGAGACCCCCATTCTCTaGCTGACCTCTGTGTTACTCCTTAGTGAACAAGAA +
Preference number: 3 (lower is better)
Translates to: SLRSLACETPIL*LTSVLLLSEQE
Trigger: TTCTTGTTCACTAAGGAGTAACACAGAGGTCAGGCAGAGAATGGGGGTCTCGCAGGCTAGGGACCTCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR GCA 72 bp AGTGACTATCTCGATAAGAAAGTGCCCAGTGCCCAATaGCCTGTGGTGGAAAGAGCTGGTCCCAGGTGCTCA +
Preference number: 3 (lower is better)
Translates to: SDYLDKKVPSAQ*PVVERAGPRCS
Trigger: TGAGCACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGGCACTGGGCACTTTCTTATCGAGATAGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR GCA 72 bp GAACCAGACGTGGGAGTGACTATCTCGATAAGAAAGTaGCCAGTGCCCAATGCCCTGTGGTGGAAAGAGCTG +
Preference number: 3 (lower is better)
Translates to: EPDVGVTISIRK*PVPNALWWKEL
Trigger: CAGCTCTTTCCACCACAGGGCATTGGGCACTGGGCACTTTCTTATCGAGATAGTCACTCCCACGTCTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CCA 72 bp GAAACAAGACATACAATTTCACAGATTCCAGAGCTCTaGGTACGGCCGGCCAATGCTGCTCCCCACCCAACC +
Preference number: 3 (lower is better)
Translates to: ETRHTISQIPEL*VRPANAAPHPT
Trigger: GGTTGGGTGGGGAGCAGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTGTGAAATTGTATGTCTTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CCA 72 bp CAGCTGAGGCTCAGCCTCTTGCGCTCACTGGTCAAGTaGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCC +
Preference number: 3 (lower is better)
Translates to: QLRLSLLRSLVK*QILEKPDLRGS
Trigger: GGATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCTGAGCCTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CAA 90 bp GCCTGGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTTGTGAGACTCCATAAGCTGTGCTGCCATCTCTaGGGAACAGGGGGTCATCCC +
Preference number: 3 (lower is better)
Translates to: AWLEKRSCWLDSLVRLHKLCCHL*GTGGHP
Trigger: GGGATGACCCCCTGTTCCCAAGAGATGGCAGCACAG...CTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR GCA 72 bp TCCTGGATTCTGAGGCTCGGAAAACTCGGTGGGAACTaGCTTCAACTGACTACACCACTCCCTGATGATGCT +
Preference number: 3 (lower is better)
Translates to: SWILRLGKLGGN*LQLTTPLPDDA
Trigger: AGCATCATCAGGGAGTGGTGTAGTCAGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
3UTR CCA 72 bp GAGGTGCTCCTGGCCTGGTTGGAAAAGAGATCTTGCTaGCTAGACAGTCTTGTGAGACTCCATAAGGGAGGA +
Preference number: 3 (lower is better)
Translates to: EVLLAWLEKRSC*LDSLVRLHKGG
Trigger: TCCTCCCTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGCCAGGAGCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
3UTR CCA 72 bp AGAGAGAAGAGAAGCCCAAGACCAATGTGCCGACCTTaGCTTCCAGGAGAACAGAGCCTTGGTCCTAACCAT +
Preference number: 3 (lower is better)
Translates to: REKRSPRPMCRP*LPGEQSLGPNH
Trigger: ATGGTTAGGACCAAGGCTCTGTTCTCCTGGAAGCCAAGGTCGGCACATTGGTCTTGGGCTTCTCTTCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR-3UTR CAA 90 bp TCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCCAGACCACACACAGATaGTCCCAGTGTAAAGTTGAG +
Preference number: 3 (lower is better)
Translates to: SEEGQPCSCLHSLVWMNFQTTHR*SQCKVE
Trigger: CTCAACTTTACACTGGGACAATCTGTGTGTGGTCTG...GAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431632.5
3UTR CCA 72 bp TCAGCAAAGTCACACGAGCATCCACCCGTCATCATATaGACCTCTGTCCTTGGCTGTGTTGAATTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: SAKSHEHPPVII*TSVLGCVEFLP
Trigger: GGGAAGGAATTCAACACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
3UTR CCA 72 bp TCAGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTaGAAAAGCCAGACCTCAGAGGATCCTTACCAGTAC +
Preference number: 3 (lower is better)
Translates to: SASCAHWSSGKF*KSQTSEDPYQY
Trigger: GTACTGGTAAGGATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR TCA 72 bp GCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATaGATTTCTACAAAACAGACCACACACAGATTGTCC +
Preference number: 3 (lower is better)
Translates to: ASPVHASTLLCG*ISTKQTTHRLS
Trigger: GGACAATCTGTGTGTGGTCTGTTTTGTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431632.5
3UTR-3UTR CAA 90 bp ATAGAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATACAGTGGCCGTGGCATaGAGTCAGAGATTGGCAAAG +
Preference number: 3 (lower is better)
Translates to: IENIKGQQSHTSIHPSSYTVAVA*SQRLAK
Trigger: CTTTGCCAATCTCTGACTCAATGCCACGGCCACTGT...ATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CCA 90 bp CGGGCTCGGCGGCACTGCGGAGCCGGTTGGCAGTGGCCCCCGTGGGTGGGCCAGCACTGCGGAGCCGGTTaGCAGTGGCCCCCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RARRHCGAGWQWPPWVGQHCGAG*QWPPWV
Trigger: CACCCACGGGGGCCACTGCCAACCGGCTCCGCAGTG...CTGGCCCACCCACGGGGGCCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp AGCCACGGGCTCGGCGGCACTGCGGAGCCGGTTGGCAGTGGCCCCCGTGGGTGGCTGAGGAGGAGACGTTaGCGGGCGCACCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SHGLGGTAEPVGSGPRGWLRRRR*RAHPCA
Trigger: TGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAG...CCACCCACGGGGGCCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCGTGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR GCA 90 bp GGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACACGGGCTCGGCGGCACTaGGGAGCCGGTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GIRAGRRGGPWHLLSWETRARRH*GAGWQW
Trigger: CCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCG...TGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCGGGAGACAGCGCCCTaGCTGGGCCCTGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGRETAP*LGPAAH
Trigger: ATGGGCAGCAGGGCCCAGGCAGGGCGCTGTCTCCCG...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp CCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCGCCAGCACCACCCATaGCCTGCTGCGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: PGPLWAVATIPPSGCPGPRQHHP*PAAGTQ
Trigger: CTGGGTGCCCGCAGCAGGGCATGGGTGGTGCTGGCG...AGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CTCCCGGTCCACATCCTCGGGATTCCGGGCTGCACCCTAGTTCATCCTGGGGCCGGAGCCGGTTGGCAGTaGCCCCCGTGGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPVHILGIPGCTLVHPGAGAGWQ*PPWVGQ
Trigger: CTGGCCCACCCACGGGGGCCACTGCCAACCGGCTCC...GGCCCCAGGATGAACTAGGGTGCAGCCCGGAATCCCGAGGATGTGGACCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp GGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACACACTGCGGAGCCGGTTaGCAGTGGCCCCCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GIRAGRRGGPWHLLSWETHCGAG*QWPPWV
Trigger: CACCCACGGGGGCCACTGCCAACCGGCTCCGCAGTG...TGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCCACCGGCCTATCTaGGGGGCTCTGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: HQAPCGQWPPSLPQAVLALHRPI*GALGAQ
Trigger: CTGGGCACCCAGAGCCCCCCAGATAGGCCGGTGGAG...GGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACGGACCCTCTGAGCTCTaGGGGATGCGGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNGPSEL*GMRRSP
Trigger: CGGTGACCTCCGCATCCCTCAGAGCTCAGAGGGTCC...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACCTGGCGCTTGGTGGCTaGTTTGAGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNLALGG*FEPLPG
Trigger: CCCTGGCAGGGGCTCAAAGCAGCCACCAAGCGCCAG...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCGCACCACCCATGCCCTaGTGCGGGCACCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LVGSGHHPSLRLSWPSRTAPPMP*CGHPGG
Trigger: CCCTCCTGGGTGCCCGCAGCAGGGCATGGGTGGTGC...GGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CCCACCCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGGAGCCGGTTGGCAGTaGCCCCCGTGGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PTPPPNICPARHGQLGSWGAGWQ*PPWVGQ
Trigger: CTGGCCCACCCACGGGGGCCACTGCCAACCGGCTCC...CCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGGGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp CCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCCTTGCCGGATGTGGTaGCCACTGGAGGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PGPLWAVATIPPSGCPGPPCRMW*PLEGSG
Trigger: GCCACTGCCCTCCAGTGGCCACCACATCCGGCAAGG...AGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCGCCCCTTGTGGGCAGTaGCCACCATCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QAPCGQWPPSLPQAVLALAPCGQ*PPSLPQ
Trigger: CTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGC...GAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp TCCTCGCGTTCGTGTTCTCGCCGCTCCCGGTCCACATCCTCGGGATTCCGGGCTCCGCCCAGTGAGGTCTaGGGAGGAGACGTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSRSCSRRSRSTSSGFRAPPSEV*GGDVGG
Trigger: CCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGG...AGCCCGGAATCCCGAGGATGTGGACCGGGAGCGGCGAGAACACGAACGCGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR TCA 90 bp AGCCACGGGCTCGGCGGCACTGCGGAGCCGGTTGGCAGTGGCCCCCGTGGGTGGGGGAGCGGCAGAAGTTaGGGTATGTTGAGAATTCGG +
Preference number: 4 (lower is better)
Translates to: SHGLGGTAEPVGSGPRGWGSGRS*GMLRIR
Trigger: CCGAATTCTCAACATACCTCAACTTCTGCCGCTCCC...CCACCCACGGGGGCCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCGTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR TCA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGGGGCTGTCACGGGGCTaGGCCTGGCTCGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVGLSRG*AWLEEA
Trigger: GGCTTCCTCGAGCCAGGCTCAGCCCCGTGACAGCCC...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp GCTCCCGGTCCACATCCTCGGGATTCCGGGCTGCACCCTAGTTCATCCTGGGGCGCGGACCCCCGTAGCTaGCCCATCCTCTCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: APGPHPRDSGLHPSSSWGADPRS*PILSSR
Trigger: ACGCGAGGAGAGGATGGGGCAGCTACGGGGGTCCGC...GCCCCAGGATGAACTAGGGTGCAGCCCGGAATCCCGAGGATGTGGACCGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR GCA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTGCCAGCCGGCTGGATaGGGGAGGCTGGCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRCQPAG*GRLAWK
Trigger: CTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCA...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACGCGGGCGCACCCCTGTaGAGCCTCATACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNAGAPL*SLILTF
Trigger: GAAGGTGAGTATGAGGCTGCACAGGGGTGCGCCCGC...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp GGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACACTGAGCTCTGAGGGATaGGGAGGTCACCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GIRAGRRGGPWHLLSWETLSSEG*GGHRPP
Trigger: GGGTGGGCGGTGACCTCCGCATCCCTCAGAGCTCAG...TGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTCTGGATGCGGGAGGCTaGCGTGGAAGCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRLDAGG*RGSHGL
Trigger: GAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAG...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CTCCCGGTCCACATCCTCGGGATTCCGGGCTGCACCCTAGTTCATCCTGGGGCCCTGGATGCGGGAGGCTaGCGTGGAAGCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: LPVHILGIPGCTLVHPGALDAGG*RGSHGL
Trigger: GAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAG...GGCCCCAGGATGAACTAGGGTGCAGCCCGGAATCCCGAGGATGTGGACCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp GGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACAGTATTGCCAGCCGGCTaGATGCGGGAGGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: GIRAGRRGGPWHLLSWETVLPAG*MREAGV
Trigger: CACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATAC...TGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCCGTAGCTGCCCCATCCTCTCCTCGCGTTCGTGTTCTCGCCGCTCCCGGTCCAGTATTGCCAGCCGGCTaGATGCGGGAGGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: PVAAPSSPRVRVLAAPGPVLPAG*MREAGV
Trigger: CACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATAC...TGGACCGGGAGCGGCGAGAACACGAACGCGAGGAGAGGATGGGGCAGCTACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp AGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCCTGGGCCCCAGAGCCTaGCTCAAGGCCCAGCACGCT +
Preference number: 4 (lower is better)
Translates to: SPPWTAWFLGLRSEEGQPLGPRA*LKAQHA
Trigger: AGCGTGCTGGGCCTTGAGCCAGGCTCTGGGGCCCAG...GGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp GGCAGCCTGAAGGTTGGGGGCAGCGGGCACCACAAGGGGGCAAGAATCCTCAGTAGGCCGGGCAGGCCCTaGCGTCTGGCTCCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: GSLKVGGSGHHKGARILSRPGRP*RLAPVA
Trigger: GGCTACAGGAGCCAGACGCCAGGGCCTGCCCGGCCT...ACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACTCCCCACCCACTCCATaGAGAGGCAGAGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNSPPTP*RGRGGA
Trigger: GGCTCCTCCTCTGCCTCTCCATGGAGTGGGTGGGGA...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTAGGCGGGGCGGGCCGTaGCACCTGCTGTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRRRGGP*HLLSWE
Trigger: TTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCT...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGCAGCCTGAAGGTTGGGGGCAGCGGGCACCACAAGGGGGCAAGAATCCTCAGTAACGGGAATTCGGGCTaGCAGGCGGGGCGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GSLKVGGSGHHKGARILSNGNSG*QAGRAV
Trigger: CACGGCCCGCCCCGCCTGCCAGCCCGAATTCCCGTT...ACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACCCACACGTAGCTCCATaGCTCACTCTTGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNPHVAP*LTLARR
Trigger: CCGGCGGGCAAGAGTGAGCCATGGAGCTACGTGTGG...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396832.6
CDS-3UTR CCA 90 bp GCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGCCGGGCACCAGTACGTaGGTGAGTACGTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: APCGQWPPSLPQAVLALKPGTST*VSTWAQ
Trigger: CTGGGCCCACGTACTCACCCACGTACTGGTGCCCGG...CTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442216.1
CDS-3UTR CCA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCACACTTCCTCAGGCCTaGCCCCGATGGGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGTLPQA*PRWAQA
Trigger: TGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGT...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp CCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGCAGCTCCGCACCACTTaGTGGACGGGATCCCCACGC +
Preference number: 4 (lower is better)
Translates to: PGPRDPQIPAPRCSQQHRQLRTT*WTGSPR
Trigger: GCGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTG...CCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp CCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCTGTGCGGACCCCCGTAGCTaGCCCATCCTCTCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: PPWTAWFLGLRSEEGQPCADPRS*PILSSR
Trigger: ACGCGAGGAGAGGATGGGGCAGCTACGGGGGTCCGC...ACAGGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR GCA 90 bp TGGCGTCTGGCTCCTGTAGCCTGGTGTTGTCAGGGGAGCATCTGGCAGCCTGAACGGGCTCGGCGGCACTaGGGAGCCGGTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: WRLAPVAWCCQGSIWQPERARRH*GAGWQW
Trigger: CCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCG...TTCAGGCTGCCAGATGCTCCCCTGACAACACCAGGCTACAGGAGCCAGACGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp GGTCGACCCGCGAGATCGCTCTGGGAGAAGTATTGCCAGCCGGCTGGATGCGGGCTGGCGCTTGGTGGCTaGTTTGAGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRPARSLWEKYCQPAGCGLALGG*FEPLPG
Trigger: CCCTGGCAGGGGCTCAAAGCAGCCACCAAGCGCCAG...CCCGCATCCAGCCGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGGTCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR GCA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCGGAGGGATAGCCTTTaGAGAGGACCTCGATGGGCG +
Preference number: 4 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGRRDSL*RGPRWA
Trigger: CGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCG...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR GCA 90 bp CCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCGGAGGGATAGCCTTTaGAGAGGACCTCGATGGGCG +
Preference number: 4 (lower is better)
Translates to: PGPLWAVATIPPSGCPGPRRDSL*RGPRWA
Trigger: CGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCG...AGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR GCA 90 bp GGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACAGCGGGCCGTGGCACCTaGTGTCTTGGGAAACACAGG +
Preference number: 4 (lower is better)
Translates to: GIRAGRRGGPWHLLSWETAGRGT*CLGKHR
Trigger: CCTGTGTTTCCCAAGACAGCAGGTGCCACGGCCCGC...TGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGACGGCCGGCCAATGCTaGTCCCCACCCAACCCCACC +
Preference number: 4 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVTAGQC*SPPNPT
Trigger: GGTGGGGTTGGGTGGGGAGCAGCATTGGCCGGCCGT...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACGGCCGGCTTTGGCTCTaGGACCTGTCACTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNGRLWL*DLSLLR
Trigger: TCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCC...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCGGGCTCAGGCACACCTaGCGACATCAGAAATGGGGC +
Preference number: 4 (lower is better)
Translates to: HQAPCGQWPPSLPQAVLAGLRHT*RHQKWG
Trigger: GCCCCATTTCTGATGTCGCCAGGTGTGCCTGAGCCC...GGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp GCTCCCGGTCCACATCCTCGGGATTCCGGGCTGCACCCTAGTTCATCCTGGGGCCCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: APGPHPRDSGLHPSSSWGPLAAQ*GLRRRR
Trigger: ACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGG...GCCCCAGGATGAACTAGGGTGCAGCCCGGAATCCCGAGGATGTGGACCGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR TCA 90 bp TGCTTGAGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGGGACCCTCTGAGCTCTaGGGGATGCGGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: CLRAGFGSGTCHFSDTDPGPSEL*GMRRSP
Trigger: CGGTGACCTCCGCATCCCTCAGAGCTCAGAGGGTCC...CGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCGCCGGTGGAAGAGGTTaGGGAAGAGCTGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: QAPCGQWPPSLPQAVLALAGGRG*GRADVG
Trigger: ACCTACGTCAGCTCTTCCGCAACCTCTTCCACCGGC...GAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR GCA 90 bp CAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCATTCTCTGCCTGGTACGGCCGGCCAATaGTGCTCCCCACCCAACCCC +
Preference number: 4 (lower is better)
Translates to: QQRPLPEVPSLRDPHSLPGTAGQ*CSPPNP
Trigger: GGGGTTGGGTGGGGAGCAGCATTGGCCGGCCGTACC...AGGCAGAGAATGGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CACCCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCGTATTGCCAGCCGGCTaGATGCGGGAGGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: HPTPKYLPSPPWTAWFLGVLPAG*MREAGV
Trigger: CACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATAC...GCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACCTGGCTCCTGTAGCCTaGTGTTGTCAGGGGAGCATC +
Preference number: 4 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNLAPVA*CCQGSI
Trigger: GATGCTCCCCTGACAACACCAGGCTACAGGAGCCAG...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGCCACACGTAGCTCCATaGCTCACTCTTGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: PGPRDPQIPAPRCSQQHRPHVAP*LTLARR
Trigger: CCGGCGGGCAAGAGTGAGCCATGGAGCTACGTGTGG...CCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp GTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACACTGCCTTGCCGGATGTaGTGGCCACTGGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VASRPQGSTDPSTPVQPTLPCRM*WPLEGS
Trigger: ACTGCCCTCCAGTGGCCACCACATCCGGCAAGGCAG...TGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp CAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGACCAGCAGCAGTGGGTaGAGAGGTGCTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QAPGIHRSQHPGAANNTGTSSSG*RGAPGL
Trigger: CAGGCCAGGAGCACCTCTCCACCCACTGCTGCTGGT...CCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp ACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGCAGGCCTGGCCCCGATaGGCTCAGGCACACCTGGCG +
Preference number: 4 (lower is better)
Translates to: TGGHPILPRNTSSGLAPMQAWPR*AQAHLA
Trigger: CGCCAGGTGTGCCTGAGCCCATCGGGGCCAGGCCTG...CATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCCGCCCAGTGAGGTCTaGGGAGGAGACGTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYPPSEV*GGDVGG
Trigger: CCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGG...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp GCCCCAGAGCCTGGCTCAAGGCCCAGCACGCTAGGAGATCCATCTTCATGTGACCCGCCCAGTGAGGTCTaGGGAGGAGACGTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: APEPGSRPSTLGDPSSCDPPSEV*GGDVGG
Trigger: CCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGG...GTCACATGAAGATGGATCTCCTAGCGTGCTGGGCCTTGAGCCAGGCTCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR TCA 90 bp CCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCTGTCCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: PPWTAWFLGLRSEEGQPCPLAAQ*GLRRRR
Trigger: ACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGG...ACAGGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR TCA 90 bp CCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGTGGCACACTTGTCTGTaGGGCTGGGATCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PSPPWTAWFLGLRSEEGQWHTCL*GWDPGD
Trigger: GTCTCCCGGATCCCAGCCTCACAGACAAGTGTGCCA...CTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR TCA 90 bp AGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCACTCCTGACCTCAAGTaGCCCACCTGTCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPPWTAWFLGLRSEEGQPTPDLK*PTCLGL
Trigger: GAGGCCCAGACAGGTGGGTCACTTGAGGTCAGGAGT...GGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366216.6
CDS-3UTR GCA 90 bp CGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGGCGGACCCCCGTAGCTaGCCCATCCTCTCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: REVSHCHLRVGGAVRISWADPRS*PILSSR
Trigger: ACGCGAGGAGAGGATGGGGCAGCTACGGGGGTCCGC...CCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CCTGAGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATCGGGCTCGGCGGCACTaGGGAGCCGGTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PEIRGRPALFMPPLSCVDRARRH*GAGWQW
Trigger: CCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCG...ATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR GCA 90 bp TGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCTGTTCATGCTGCCAGCCGGCTGGATaGGGGAGGCTGGCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: WTAWFLGLRSEEGQPCSCCQPAG*GRLAWK
Trigger: CTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCA...GCATGAACAGGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR GCA 90 bp CACCCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCGCGGGCGCACCCCTGTaGAGCCTCATACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: HPTPKYLPSPPWTAWFLGAGAPL*SLILTF
Trigger: GAAGGTGAGTATGAGGCTGCACAGGGGTGCGCCCGC...GCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR GCA 90 bp GTGAGGTCTGAGGAGGAGACGTTGGCGGGCGCACCCCTGTGCAGCCTCATACTCGCGGGCGCACCCCTGTaGAGCCTCATACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: VRSEEETLAGAPLCSLILAGAPL*SLILTF
Trigger: GAAGGTGAGTATGAGGCTGCACAGGGGTGCGCCCGC...GAGTATGAGGCTGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGACCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR GCA 90 bp GCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCCTCTCCTGGCGCTTGGTGGCTaGTTTGAGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALALGPVTSPTRTRPVPLLALGG*FEPLPG
Trigger: CCCTGGCAGGGGCTCAAAGCAGCCACCAAGCGCCAG...GAGAGGAACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTCGGAGGGATAGCCTTTaGAGAGGACCTCGATGGGCG +
Preference number: 4 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRRRDSL*RGPRWA
Trigger: CGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCG...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp GTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACATGGTCCCATCTGCCTTaGCGGATGTGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: VASRPQGSTDPSTPVQPTWSHLP*RMWWPL
Trigger: CAGTGGCCACCACATCCGGCAAGGCAGATGGGACCA...TGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp TGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTCACTGCGGAGCCGGTTaGCAGTGGCCCCCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: WKSPAREVSHCHLRVGGAHCGAG*QWPPWV
Trigger: CACCCACGGGGGCCACTGCCAACCGGCTCCGCAGTG...AGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTGGATGCGGGAGGCTaGCGTGGAAGCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYLDAGG*RGSHGL
Trigger: GAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAG...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GCCCCAGAGCCTGGCTCAAGGCCCAGCACGCTAGGAGATCCATCTTCATGTGACCTGGATGCGGGAGGCTaGCGTGGAAGCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: APEPGSRPSTLGDPSSCDLDAGG*RGSHGL
Trigger: GAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAG...GTCACATGAAGATGGATCTCCTAGCGTGCTGGGCCTTGAGCCAGGCTCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp GCTCCCGGTCCACATCCTCGGGATTCCGGGCTGCACCCTAGTTCATCCTGGGGCCCCGCGAGATCGCTCTaGGAGAAGTATTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: APGPHPRDSGLHPSSSWGPARSL*EKYCQP
Trigger: CGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGG...GCCCCAGGATGAACTAGGGTGCAGCCCGGAATCCCGAGGATGTGGACCGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTGAGAAGCCCTGCCGGTaGAAGAGGTTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTREKPCR*KRLRKS
Trigger: GCTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTC...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGCCACACGTAGCTCCATaGCTCACTCTTGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVPHVAP*LTLARR
Trigger: CCGGCGGGCAAGAGTGAGCCATGGAGCTACGTGTGG...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CCA 90 bp CTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACCTGCCTTGCCGGATGTaGTGGCCACTGGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LPGPRDPQIPAPRCSQQHLPCRM*WPLEGS
Trigger: ACTGCCCTCCAGTGGCCACCACATCCGGCAAGGCAG...GTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp GGGCCTGGCCTCAGGGTGAAGGTTCCCATTGCATGTTTTCCAGGTGCTTCTGCCCAGGCCTGGCCCCGATaGGCTCAGGCACACCTGGCG +
Preference number: 4 (lower is better)
Translates to: GPGLRVKVPIACFPGASAQAWPR*AQAHLA
Trigger: CGCCAGGTGTGCCTGAGCCCATCGGGGCCAGGCCTG...GGCAGAAGCACCTGGAAAACATGCAATGGGAACCTTCACCCTGAGGCCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCTGTGCTGCCATCTCTTaGGAACAGGGGGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGCAAIS*EQGVIP
Trigger: TGGGATGACCCCCTGTTCCCAAGAGATGGCAGCACA...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp CAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCTGTGCTGCCATCTCTTaGGAACAGGGGGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: QAPCGQWPPSLPQAVLALCAAIS*EQGVIP
Trigger: TGGGATGACCCCCTGTTCCCAAGAGATGGCAGCACA...GAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp CTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCGCTATGAGTCTGTCCTaGGACCCGTTCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LVGSGHHPSLRLSWPSRTAMSLS*DPFPPG
Trigger: GCCTGGTGGGAACGGGTCCCAGGACAGACTCATAGC...GGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp CAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGGCAGTTGTGCTGAGCTaGAGGGCCAAGCCCATCACG +
Preference number: 4 (lower is better)
Translates to: QAPGIHRSQHPGAANNTGAVVLS*RAKPIT
Trigger: CGTGATGGGCTTGGCCCTCCAGCTCAGCACAACTGC...CCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CAA 72 bp CACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTaGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HPQISAQPAMDS*VPGPEIRGRPA
Trigger: GGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR TCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCCGCCCAGTGAGGTCTaGGGAGGAGACGTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHPPSEV*GGDVGG
Trigger: CCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGG...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp CAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGACCGCCCAGTGAGGTCTaGGGAGGAGACGTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QISAQPAMDSLVPGPEIRPPSEV*GGDVGG
Trigger: CCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGG...TCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR TCA 90 bp GCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCCTCTCCCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: ALALGPVTSPTRTRPVPLPLAAQ*GLRRRR
Trigger: ACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGG...GAGAGGAACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACGGGAGCGGCAGAAGTTaGGGTATGTTGAGAATTCGG +
Preference number: 4 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNGSGRS*GMLRIR
Trigger: CCGAATTCTCAACATACCTCAACTTCTGCCGCTCCC...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp GTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAGGCCTGGCCTCAGGGTaGAGGTTCCCATTGCATGTT +
Preference number: 4 (lower is better)
Translates to: VASRPQGSTDPSTPVQPTGLASG*RFPLHV
Trigger: AACATGCAATGGGAACCTTCACCCTGAGGCCAGGCC...TGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR TCA 90 bp CATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCGCACCAGTACGTGGGTaGGTACGTGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: HPILPRNTSSGLAPMGSGAPVRG*VRGPST
Trigger: TGTGCTGGGCCCACGTACTCACCCACGTACTGGTGC...GCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442216.1
CDS-3UTR TCA 90 bp GCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGAGACCCAGGGGCCCATaGCCAAGAAGAAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: APCGQWPPSLPQAVLALKRPRGP*PRRKQA
Trigger: TGCTTGCTTTCTTCTTGGTCATGGGCCCCTGGGTCT...CTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp GCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGCCAGAAGGTCTAGGGTaGAGTCAGAGAAGACGTCCC +
Preference number: 4 (lower is better)
Translates to: APCGQWPPSLPQAVLALKPEGLG*SQRRRP
Trigger: GGGACGTCTTCTCTGACTTCACCCTAGACCTTCTGG...CTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp CAGGTCAATACATCCACACACACACACACACACACACACGCAGGGGACGCCGGCGCGGACCCCCGTAGCTaGCCCATCCTCTCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: QVNTSTHTHTHTHAGDAGADPRS*PILSSR
Trigger: ACGCGAGGAGAGGATGGGGCAGCTACGGGGGTCCGC...GCCGGCGTCCCCTGCGTGTGTGTGTGTGTGTGTGTGTGTGGATGTATTGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CACTGGTCCAATGGGGGCTCTCCTCACTTCCCGAGATGGTCAAATGGCACACTTCGGGCTCGGCGGCACTaGGGAGCCGGTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HWSNGGSPHFPRWSNGTLRARRH*GAGWQW
Trigger: CCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCG...AAGTGTGCCATTTGACCATCTCGGGAAGTGAGGAGAGCCCCCATTGGACCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR GCA 90 bp CTCATACTCACCTTCCTCTCCCGGTCGACCCGCGAGATCGCTCTGGGAGAAGTATGCCAGCCGGCTGGATaGGGGAGGCTGGCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LILTFLSRSTREIALGEVCQPAG*GRLAWK
Trigger: CTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCA...TACTTCTCCCAGAGCGATCTCGCGGGTCGACCGGGAGAGGAAGGTGAGTATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR GCA 90 bp GGCAGCCTGAAGGTTGGGGGCAGCGGGCACCACAAGGGGGCAAGAATCCTCAGTATCCGGGAGACCTCTTaGCGCCCAGTGAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSLKVGGSGHHKGARILSIRETS*RPVRSE
Trigger: CTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGAT...ACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CCCACCCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGATCCGGGAGACCTCTTaGCGCCCAGTGAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PTPPPNICPARHGQLGSWIRETS*RPVRSE
Trigger: CTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGAT...CCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR GCA 90 bp AGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCGGCCAGCCCTGTTCATaGCTCCACTCTCTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SPPWTAWFLGLRSEEGQPGQPCS*LHSLVW
Trigger: CCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCC...GGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR GCA 90 bp GGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACAAAGCGTAGCGGGCCGTaGCGGTCAGGTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GIRAGRRGGPWHLLSWETKRSGP*RSGSCF
Trigger: AAAACAAGAACCTGACCGGCACGGCCCGCTACGCTT...TGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp TGGGAACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCTGGCGCTTGGTGGCTaGTTTGAGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WEQGVIPSSQETLPQAWPLALGG*FEPLPG
Trigger: CCCTGGCAGGGGCTCAAAGCAGCCACCAAGCGCCAG...GGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR GCA 90 bp CCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCGGAGGGATAGCCTTTaGAGAGGACCTCGATGGGCG +
Preference number: 4 (lower is better)
Translates to: PQGSTDPSTPVQPTTQGVRRDSL*RGPRWA
Trigger: CGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCG...GACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp CAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGGCCGGTGGAAGAGGTTaGGGAAGAGCTGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: QAPGIHRSQHPGAANNTGAGGRG*GRADVG
Trigger: ACCTACGTCAGCTCTTCCGCAACCTCTTCCACCGGC...CCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp TGGCGTCTGGCTCCTGTAGCCTGGTGTTGTCAGGGGAGCATCTGGCAGCCTGAACTGAGCTCTGAGGGATaGGGAGGTCACCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: WRLAPVAWCCQGSIWQPELSSEG*GGHRPP
Trigger: GGGTGGGCGGTGACCTCCGCATCCCTCAGAGCTCAG...TTCAGGCTGCCAGATGCTCCCCTGACAACACCAGGCTACAGGAGCCAGACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTGCCCTGCCTGGGCCCTaGTGCCCATGGTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: HRSQHPGAANNTGCPVYCALPGP*CPWWHK
Trigger: CTTGTGCCACCATGGGCAGCAGGGCCCAGGCAGGGC...ACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp AAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGATTCGGAGCCGGTTGGCAGTaGCCCCCGTGGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KSATVISEWVGLCVSPGFGAGWQ*PPWVGQ
Trigger: CTGGCCCACCCACGGGGGCCACTGCCAACCGGCTCC...GAATCCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TGCTTGAGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGCCCGCGAGATCGCTCTaGGAGAAGTATTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: CLRAGFGSGTCHFSDTDPPARSL*EKYCQP
Trigger: CGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGG...CGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTGAGGAGGAGACGTTaGCGGGCGCACCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYLRRRR*RAHPCA
Trigger: TGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAG...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCTGAGGAGGAGACGTTaGCGGGCGCACCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PQISAQPAMDSLVPGPEILRRRR*RAHPCA
Trigger: TGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAG...GATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp CCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGCCGCCATGGACAGCTTaGTTCCTGGGCCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: PTPKYLPSPPWTAWFLGLPPWTA*FLGLRS
Trigger: GGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGG...CAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp GTGAGGTCTGAGGAGGAGACGTTGGCGGGCGCACCCCTGTGCAGCCTCATACTCGAGAAGCCCTGCCGGTaGAAGAGGTTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VRSEEETLAGAPLCSLILEKPCR*KRLRKS
Trigger: GCTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTC...GAGTATGAGGCTGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGACCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp CAGGTCAATACATCCACACACACACACACACACACACACGCAGGGGACGCCGGCAGGCGGGGCGGGCCGTaGCACCTGCTGTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QVNTSTHTHTHTHAGDAGRRGGP*HLLSWE
Trigger: TTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCT...GCCGGCGTCCCCTGCGTGTGTGTGTGTGTGTGTGTGTGTGGATGTATTGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTGAGGTGCTCCTGGCCTaGTTGGAAAAGAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: PGPLWAVATIPPSGCPGPEVLLA*LEKRSC
Trigger: GCAAGATCTCTTTTCCAACCAGGCCAGGAGCACCTC...AGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CCCGGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCACCAGCAGCAGTGGGTaGAGAGGTGCTCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGQLTGPRNTVAVCAESGTSSSG*RGAPGL
Trigger: CAGGCCAGGAGCACCTCTCCACCCACTGCTGCTGGT...GCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp CAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTACTGTTGGGTAGCATaGGAAGGGCCTGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QAPGIHRSQHPGAANNTGYCWVA*EGPGLR
Trigger: CCTGAGGCCAGGCCCTTCCCATGCTACCCAACAGTA...CCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp TCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACTCCCGGCCAGCTGACTaGACCTCGGAACACAGTGGC +
Preference number: 4 (lower is better)
Translates to: SHPPKKHFLRPGPDGLRHSRPAD*TSEHSG
Trigger: GCCACTGTGTTCCGAGGTCCAGTCAGCTGGCCGGGA...GTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCCAGGCCCCAGGGATCCACACTCCACCGGCCTATCTaGGGGGCTCTGGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GTQWLYVLRVASRPQGSTLHRPI*GALGAQ
Trigger: CTGGGCACCCAGAGCCCCCCAGATAGGCCGGTGGAG...TGTGGATCCCTGGGGCCTGGAAGCCACTCTCAGCACATACAGCCACTGTGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp TCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACACACTTCCTCAGGCCTaGCCCCGATGGGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SHPPKKHFLRPGPDGLRHTLPQA*PRWAQA
Trigger: TGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGT...GTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp GGCCTGAGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGCCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: GLRSEEGQPCSCLHSLVWPLAAQ*GLRRRR
Trigger: ACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGG...CCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR TCA 90 bp CTTGTCTGTGAGGCTGGGATCCGGGAGACCTCTTGCCGCCCAGTGAGGTCTGAGTGGCACACTTGTCTGTaGGGCTGGGATCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LVCEAGIRETSCRPVRSEWHTCL*GWDPGD
Trigger: GTCTCCCGGATCCCAGCCTCACAGACAAGTGTGCCA...CTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGATCCCAGCCTCACAGACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR TCA 90 bp CACCCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGGTCTCGAACTCCTaGCCTCAAGTGACCCACCTG +
Preference number: 4 (lower is better)
Translates to: HPTPKYLPSPPWTAWFLGLVSNS*PQVTHL
Trigger: CAGGTGGGTCACTTGAGGTCAGGAGTTCGAGACCAG...GCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366216.6
CDS-3UTR TCA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTCTGAAGCTCAAACTGTaGTGGGCACAGAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRLKLKL*WAQRGP
Trigger: GGGTCCTCTCTGTGCCCATCACAGTTTGAGCTTCAG...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359867.7
CDS-3UTR TCA 90 bp TGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTCAGCTCCGCACCACTTaGTGGACGGGATCCCCACGC +
Preference number: 4 (lower is better)
Translates to: WKSPAREVSHCHLRVGGAQLRTT*WTGSPR
Trigger: GCGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTG...AGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp GCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCTCGATGGGCGTTaGCATCTTCTTCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: APCGQWPPSLPQAVLALKDLDGR*HLLLAD
Trigger: ATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTC...CTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp TGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCCCATGGCAGGGGGGAGCGGCAGAAGTTaGGGTATGTTGAGAATTCGG +
Preference number: 4 (lower is better)
Translates to: WPPSLPQAVLALKDPMAGGSGRS*GMLRIR
Trigger: CCGAATTCTCAACATACCTCAACTTCTGCCGCTCCC...CCCTGCCATGGGGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp GTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACACAGTGGCCGTGGCATTaGGTCAGAGATTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VASRPQGSTDPSTPVQPTQWPWH*VRDWQR
Trigger: CCTTTGCCAATCTCTGACTCAATGCCACGGCCACTG...TGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR TCA 90 bp CAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCATTCTCTGCCTAGTGGCTGTATGTGCTaGGAGTGGCTTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QQRPLPEVPSLRDPHSLPSGCMC*EWLPGP
Trigger: GGGGCCTGGAAGCCACTCTCAGCACATACAGCCACT...AGGCAGAGAATGGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp CAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCATTCTCTGCCTCTGAGGGCCCTGCCATaGAAGAGGCACACCAGGATG +
Preference number: 4 (lower is better)
Translates to: QQRPLPEVPSLRDPHSLPLRALP*KRHTRM
Trigger: CATCCTGGTGTGCCTCTTTCATGGCAGGGCCCTCAG...AGGCAGAGAATGGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp TCCCAGTGTAAAGTTGAGTCCCCCGACGTGTCGGACTACTGCCTAAGCAAACACCGGGCTCGGCGGCACTaGGGAGCCGGTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SQCKVESPDVSDYCLSKHRARRH*GAGWQW
Trigger: CCACTGCCAACCGGCTCCGCAGTGCCGCCGAGCCCG...GTGTTTGCTTAGGCAGTAGTCCGACACGTCGGGGGACTCAACTTTACACTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR GCA 90 bp TGGCGTCTGGCTCCTGTAGCCTGGTGTTGTCAGGGGAGCATCTGGCAGCCTGAAGCGGGCGCACCCCTGTaGAGCCTCATACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: WRLAPVAWCCQGSIWQPEAGAPL*SLILTF
Trigger: GAAGGTGAGTATGAGGCTGCACAGGGGTGCGCCCGC...TTCAGGCTGCCAGATGCTCCCCTGACAACACCAGGCTACAGGAGCCAGACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp TGCAGCCTCATACTCACCTTCCTCTCCCGGTCGACCCGCGAGATCGCTCTGGGAATCCGGGAGACCTCTTaGCGCCCAGTGAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: CSLILTFLSRSTREIALGIRETS*RPVRSE
Trigger: CTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGAT...TCCCAGAGCGATCTCGCGGGTCGACCGGGAGAGGAAGGTGAGTATGAGGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR GCA 90 bp GGTGCTTCTGCCAGGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGCGGAGGGATAGCCTTTaGAGAGGACCTCGATGGGCG +
Preference number: 4 (lower is better)
Translates to: GASARGLLEVVQLTTVAVRRDSL*RGPRWA
Trigger: CGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCG...CACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp CTTCCTCTCCCGGTCGACCCGCGAGATCGCTCTGGGAGAAGTATTGCCAGCCGGGCCGGTGGAAGAGGTTaGGGAAGAGCTGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: LPLPVDPRDRSGRSIASRAGGRG*GRADVG
Trigger: ACCTACGTCAGCTCTTCCGCAACCTCTTCCACCGGC...CCGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGGTCGACCGGGAGAGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR GCA 90 bp TGGCGTCTGGCTCCTGTAGCCTGGTGTTGTCAGGGGAGCATCTGGCAGCCTGAAGCGGGCCGTGGCACCTaGTGTCTTGGGAAACACAGG +
Preference number: 4 (lower is better)
Translates to: WRLAPVAWCCQGSIWQPEAGRGT*CLGKHR
Trigger: CCTGTGTTTCCCAAGACAGCAGGTGCCACGGCCCGC...TTCAGGCTGCCAGATGCTCCCCTGACAACACCAGGCTACAGGAGCCAGACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATTCCATGGCTCACTCTTaGCCGCCGGGAAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHSMAHS*PPGRRR
Trigger: TCGGCGCCTTCCCGGCGGGCAAGAGTGAGCCATGGA...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396832.6
CDS-3UTR GCA 90 bp TCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACTGGTCCCATCTGCCTTaGCGGATGTGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SHPPKKHFLRPGPDGLRHWSHLP*RMWWPL
Trigger: CAGTGGCCACCACATCCGGCAAGGCAGATGGGACCA...GTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp GTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACATCTAACTCCAGGGCCTaGCTCAAGAGGGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VASRPQGSTDPSTPVQPTSNSRA*LKRDFQ
Trigger: CTGGAAGTCCCTCTTGAGGCAGGCCCTGGAGTTAGA...TGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp TCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACGGCTGTGGGTGCCTCTaGCCAGCTTCTAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SHPPKKHFLRPGPDGLRHGCGCL*PASNSR
Trigger: CCTGGAGTTAGAAGCTGGGCAGAGGCACCCACAGCC...GTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp CCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTTCTGCCAGGGGACTaGTGGAGGTGGTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PQGSTDPSTPVQPTTQGVLLPGD*WRWFSS
Trigger: TGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAG...GACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp CCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTATCCCAGCACCCCGGTaGAGCCAACAACACAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGIHRSQHPGAANNTGCPIPAPR*SQQHRV
Trigger: CACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGAT...AGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp GCTGAAAAGGGCAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCGTGCCCAGTGCCCAATaGCCTGTGGTGGAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: AEKGNRGLSLRSLACETPVPSAQ*PVVERA
Trigger: AGCTCTTTCCACCACAGGGCATTGGGCACTGGGCAC...GGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTGCCCTTTTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp CACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCATCTCGATAAGAAAGTaGCCAGTGCCCAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: HQAPCGQWPPSLPQAVLAISIRK*PVPNAL
Trigger: CAGGGCATTGGGCACTGGGCACTTTCTTATCGAGAT...GGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCCTCTCCCCGCGAGATCGCTCTaGGAGAAGTATTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ALALGPVTSPTRTRPVPLPARSL*EKYCQP
Trigger: CGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGG...GAGAGGAACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTCAAACACTGGTCCAATaGGGGCTCTCCTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRQTLVQ*GLSSLP
Trigger: GGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTG...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GCTGAAAAGGGCAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCATGCGGCTGATCATCTaGTCGGCCAAGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: AEKGNRGLSLRSLACETPMRLII*SAKSST
Trigger: GGTGCTGCTCTTGGCCGACCAGATGATCAGCCGCAT...GGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTGCCCTTTTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp TTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGAGAAGCCCTGCCGGTaGAAGAGGTTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FQAPGIHRSQHPGAANNTEKPCR*KRLRKS
Trigger: GCTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTC...TGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp CATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCGAGAAGCCCTGCCGGTaGAAGAGGTTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HPILPRNTSSGLAPMGSGEKPCR*KRLRKS
Trigger: GCTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTC...GCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp CGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGTGGCAGCCTGAAGGTTaGGGGCAGCGGGCACCACAA +
Preference number: 4 (lower is better)
Translates to: REVSHCHLRVGGAVRISWWQPEG*GQRAPQ
Trigger: TTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCCA...CCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGTGCTTCTGCCAGGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGACCAGCAGCAGTGGGTaGAGAGGTGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: GASARGLLEVVQLTTVAVTSSSG*RGAPGE
Trigger: TTCGCCAGGAGCACCTCTCCACCCACTGCTGCTGGT...CACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413574.6
CDS-3UTR CCA 90 bp TTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGCTCAGGCACACCTaGCGACATCAGAAATGGGGC +
Preference number: 4 (lower is better)
Translates to: FQAPGIHRSQHPGAANNTGLRHT*RHQKWG
Trigger: GCCCCATTTCTGATGTCGCCAGGTGTGCCTGAGCCC...TGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp ACAGATTCCAGAGCTCTGGGTACGGCCGGCCAATGCTGCTCCCCACCCAACCCCCCCTCAAGGACCCCATaGCAGGGCCTTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: TDSRALGTAGQCCSPPNPPSRTP*QGLFHH
Trigger: ATGGTGGAAAAGGCCCTGCCATGGGGTCCTTGAGGG...GGGGTTGGGTGGGGAGCAGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTGT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCATTCTCTGCCTGCTATGAGTCTGTCCTaGGACCCGTTCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: QQRPLPEVPSLRDPHSLPAMSLS*DPFPPG
Trigger: GCCTGGTGGGAACGGGTCCCAGGACAGACTCATAGC...AGGCAGAGAATGGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCCAGGCCCCAGGGATCCACACCCCCAAGCCCGCCTTaGCCTCCAGGTGACTCACGA +
Preference number: 4 (lower is better)
Translates to: GTQWLYVLRVASRPQGSTPPSPP*PPGDSR
Trigger: TCGTGAGTCACCTGGAGGCCAAGGCGGGCTTGGGGG...TGTGGATCCCTGGGGCCTGGAAGCCACTCTCAGCACATACAGCCACTGTGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACACCAATGTGCCGACCTTaGCTTCCAGGAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: VASRPQGSTDPSTPVQPTPMCRP*LPGEQS
Trigger: GCTCTGTTCTCCTGGAAGCCAAGGTCGGCACATTGG...TGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCGTGCCCAATGCCCTGTaGTGGAAAGAGCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PQGSTDPSTPVQPTTQGVVPNAL*WKELVP
Trigger: TGGGACCAGCTCTTTCCACCACAGGGCATTGGGCAC...GACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp GGCAGCCTGAAGGTTGGGGGCAGCGGGCACCACAAGGGGGCAAGAATCCTCAGTTCACACACTCCAGCTTaGTGGCGACTTCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: GSLKVGGSGHHKGARILSSHTPA*WRLPHQ
Trigger: CTGGTGAGGAAGTCGCCATCAAGCTGGAGTGTGTGA...ACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp AGCGGGCACCACAAGGGGGCAAGAATCCTCAGTGCTGAGGGCATCTCATCTTCTCAGCTCCGCACCACTTaGTGGACGGGATCCCCACGC +
Preference number: 4 (lower is better)
Translates to: SGHHKGARILSAEGISSSQLRTT*WTGSPR
Trigger: GCGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTG...AGAAGATGAGATGCCCTCAGCACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp CCCATCCTCTCCTCGCGTTCGTGTTCTCGCCGCTCCCGGTCCACATCCTCGGGAGACCTCGATGGGCGTTaGCATCTTCTTCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: PILSSRSCSRRSRSTSSGDLDGR*HLLLAD
Trigger: ATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTC...TCCCGAGGATGTGGACCGGGAGCGGCGAGAACACGAACGCGAGGAGAGGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR TCA 90 bp CCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGACCTCGATGGGCGTTaGCATCTTCTTCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: PGPRDPQIPAPRCSQQHRDLDGR*HLLLAD
Trigger: ATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTC...CCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR TCA 90 bp CTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCGGGAGCGGCAGAAGTTaGGGTATGTTGAGAATTCGG +
Preference number: 4 (lower is better)
Translates to: LVGSGHHPSLRLSWPSRTGSGRS*GMLRIR
Trigger: CCGAATTCTCAACATACCTCAACTTCTGCCGCTCCC...GGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCCTGATGATGCTTaGGGGCCGGCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYLPDDA*GPALAL
Trigger: CAGAGCCAAAGCCGGCCCTCAAGCATCATCAGGGAG...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp GTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACACTGGTCTTAAACTCCTaGCCTCAAGTCATCCGCCCT +
Preference number: 4 (lower is better)
Translates to: VASRPQGSTDPSTPVQPTLVLNS*PQVIRP
Trigger: AGGGCGGATGACTTGAGGTCAGGAGTTTAAGACCAG...TGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR TCA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGCAGTGGCCGTGGCATTaGGTCAGAGATTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVQWPWH*VRDWQR
Trigger: CCTTTGCCAATCTCTGACTCAATGCCACGGCCACTG...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR TCA 90 bp CCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCTGTCCTTGGCTGTGTTaGATTCCTTCCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PQGSTDPSTPVQPTTQGVCPWLC*IPSRPA
Trigger: AGCTGGCCGGGAAGGAATTCAACACAGCCAAGGACA...GACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp CACCCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCACGATCTCGGCTCACTaGAACCTCCACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: HPTPKYLPSPPWTAWFLGTISAH*NLHLPD
Trigger: ATCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCGT...GCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366216.6
CDS-3UTR GCA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGAAGCGTAGCGGGCCGTaGCGGTCAGGTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVKRSGP*RSGSCF
Trigger: AAAACAAGAACCTGACCGGCACGGCCCGCTACGCTT...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR GCA 90 bp CTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAAGCGTAGCGGGCCGTaGCGGTCAGGTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LPGPRDPQIPAPRCSQQHKRSGP*RSGSCF
Trigger: AAAACAAGAACCTGACCGGCACGGCCCGCTACGCTT...GTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp CTCACCTTCCTCTCCCGGTCGACCCGCGAGATCGCTCTGGGAGAAGTATTGCCACGGAGGGATAGCCTTTaGAGAGGACCTCGATGGGCG +
Preference number: 4 (lower is better)
Translates to: LTFLSRSTREIALGEVLPRRDSL*RGPRWA
Trigger: CGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCG...TGGCAATACTTCTCCCAGAGCGATCTCGCGGGTCGACCGGGAGAGGAAGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR GCA 90 bp GCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCCTCTCGCCGGTGGAAGAGGTTaGGGAAGAGCTGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: ALALGPVTSPTRTRPVPLAGGRG*GRADVG
Trigger: ACCTACGTCAGCTCTTCCGCAACCTCTTCCACCGGC...GAGAGGAACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACTTTTCCAGGTGCTTCTaGCAGGGGACTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LPGPRDPQIPAPRCSQQHFSRCF*QGTAGG
Trigger: ACCTCCAGCAGTCCCCTGGCAGAAGCACCTGGAAAA...GTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp ACAGATTCCAGAGCTCTGGGTACGGCCGGCCAATGCTGCTCCCCACCCAACCCCCCATGGCCTCCACTGTaGTGCCATCTCTTGGGAACA +
Preference number: 4 (lower is better)
Translates to: TDSRALGTAGQCCSPPNPPWPPL*CHLLGT
Trigger: TGTTCCCAAGAGATGGCAGCACAGTGGAGGCCATGG...GGGGTTGGGTGGGGAGCAGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp GGGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTAGCCCAAGACCAATGTaGCGACCTTGGCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GPASRGTSRKAVRPAAVGSPRPM*RPWLPG
Trigger: TCCTGGAAGCCAAGGTCGGCACATTGGTCTTGGGCT...ACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GGAAGCAGTCTCCATGGATTCTGCCCTAAAACCAGGAATGGAAGATGGAGCTGCGGAGCCGGTTGGCAGTaGCCCCCGTGGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSSLHGFCPKTRNGRWSCGAGWQ*PPWVGQ
Trigger: CTGGCCCACCCACGGGGGCCACTGCCAACCGGCTCC...GCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGGAGACTGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCTGAGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGTATTGCCAGCCGGCTaGATGCGGGAGGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: PEIRGRPALFMPPLSCVDVLPAG*MREAGV
Trigger: CACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATAC...ATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp CCCGGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCATGCGGCTGATCATCTaGTCGGCCAAGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PGQLTGPRNTVAVCAESGMRLII*SAKSST
Trigger: GGTGCTGCTCTTGGCCGACCAGATGATCAGCCGCAT...GCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp GGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACAATCCGTTCATACTTCTaGCGCTTGGTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GIRAGRRGGPWHLLSWETIRSYF*RLVAAL
Trigger: CAAAGCAGCCACCAAGCGCCAGAAGTATGAACGGAT...TGTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATGAGAAGCCCTGCCGGTaGAAGAGGTTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYEKPCR*KRLRKS
Trigger: GCTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTC...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCCTCTCCTGGCTCCTGTAGCCTaGTGTTGTCAGGGGAGCATC +
Preference number: 4 (lower is better)
Translates to: ALALGPVTSPTRTRPVPLLAPVA*CCQGSI
Trigger: GATGCTCCCCTGACAACACCAGGCTACAGGAGCCAG...GAGAGGAACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TGCTTGAGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGTCATCTCAGAGTGGGTaGGGCTGTGCGTATCTCCTG +
Preference number: 4 (lower is better)
Translates to: CLRAGFGSGTCHFSDTDPSSQSG*GCAYLL
Trigger: CAGGAGATACGCACAGCCCCACCCACTCTGAGATGA...CGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTTCCCCACCCACTCCATaGAGAGGCAGAGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: WKSPAREVSHCHLRVGGASPPTP*RGRGGA
Trigger: GGCTCCTCCTCTGCCTCTCCATGGAGTGGGTGGGGA...AGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TGCTTGAGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCAGGAATGGAAGATaGAGCTGCCACCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: CLRAGFGSGTCHFSDTDPTRNGR*SCHRLM
Trigger: CATCAGCCGGTGGCAGCTCCATCTTCCATTCCTGGT...CGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTTACTGTTGGGTAGCATaGGAAGGGCCTGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PGIHRSQHPGAANNTGCPYCWVA*EGPGLR
Trigger: CCTGAGGCCAGGCCCTTCCCATGCTACCCAACAGTA...AGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp TCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACTGGCGACATCAGAAATaGGGCCCTGGAGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: SHPPKKHFLRPGPDGLRHWRHQK*GPGVQT
Trigger: GGTCTGGACTCCAGGGCCCCATTTCTGATGTCGCCA...GTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp CATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCGGGCCTTTTCCACCATaGCCTCCACTGTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HPILPRNTSSGLAPMGSGGPFPP*PPLCCH
Trigger: ATGGCAGCACAGTGGAGGCCATGGTGGAAAAGGCCC...GCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp GGTGCTTCTGCCAGGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGGGGCCTTTTCCACCATaGCCTCCACTGTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GASARGLLEVVQLTTVAVGPFPP*PPLCCH
Trigger: ATGGCAGCACAGTGGAGGCCATGGTGGAAAAGGCCC...CACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTTGAGCAAGCACCATGACTaGGTCCAGGCTGGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: QIPAPRCSQQHRVSCLLLSKHHD*VQAGPR
Trigger: CCTCGGGCCAGCCTGGACCCAGTCATGGTGCTTGCT...CAACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp TGCTTGAGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGGGAACTGCCTTCAACTaGCTACACCACTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: CLRAGFGSGTCHFSDTDPGTAFN*LHHSLM
Trigger: CATCAGGGAGTGGTGTAGTCAGTTGAAGGCAGTTCC...CGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp TCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTAGTGGCTGTATGTGCTaGGAGTGGCTTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: STDPSTPVQPTTQGVLSTSGCMC*EWLPGP
Trigger: GGGGCCTGGAAGCCACTCTCAGCACATACAGCCACT...AGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR TCA 90 bp GGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCAGTGGCTGTATGTGCTaGGAGTGGCTTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQLTGPRNTVAVCAESGFSGCMC*EWLPGP
Trigger: GGGGCCTGGAAGCCACTCTCAGCACATACAGCCACT...GAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR TCA 90 bp TTCCTCTCCCGGTCGACCCGCGAGATCGCTCTGGGAGAAGTATTGCCAGCCGGCAGGAAGGGGGCCGCATaGATTTCAGCATGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: FLSRSTREIALGEVLPAGRKGAA*ISACSS
Trigger: ACTGGAACATGCTGAAATTCATGCGGCCCCCTTCCT...GCCGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGGTCGACCGGGAGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR TCA 90 bp CAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTTGGGGGAGCCGGGCACCTaGAAGGGACAAAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: QIPAPRCSQQHRVSCLLLGEPGT*KGQKAQ
Trigger: CTGTGCTTTTTGTCCCTTTCAGGTGCCCGGCTCCCC...CAACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATATCCGGGAGACCTCTTaGCGCCCAGTGAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHIRETS*RPVRSE
Trigger: CTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGAT...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp TGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTCGGAGGGATAGCCTTTaGAGAGGACCTCGATGGGCG +
Preference number: 4 (lower is better)
Translates to: WKSPAREVSHCHLRVGGARRDSL*RGPRWA
Trigger: CGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCG...AGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp TGGCGTCTGGCTCCTGTAGCCTGGTGTTGTCAGGGGAGCATCTGGCAGCCTGAAGCCGGTGGAAGAGGTTaGGGAAGAGCTGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: WRLAPVAWCCQGSIWQPEAGGRG*GRADVG
Trigger: ACCTACGTCAGCTCTTCCGCAACCTCTTCCACCGGC...TTCAGGCTGCCAGATGCTCCCCTGACAACACCAGGCTACAGGAGCCAGACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGAATGGAAGATGGAGCTaGCACCGGCTGATGACGGGC +
Preference number: 4 (lower is better)
Translates to: REVSHCHLRVGGAVRISWNGRWS*HRLMTG
Trigger: GCCCGTCATCAGCCGGTGGCAGCTCCATCTTCCATT...CCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp TGGGAACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCGGAAATGGTCCCATCTaGCTTGCCGGATGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WEQGVIPSSQETLPQAWPGNGPI*LAGCGG
Trigger: GCCACCACATCCGGCAAGGCAGATGGGACCATTTCC...GGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp TTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACATCTAACTCCAGGGCCTaGCTCAAGAGGGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: FQAPGIHRSQHPGAANNTSNSRA*LKRDFQ
Trigger: CTGGAAGTCCCTCTTGAGGCAGGCCCTGGAGTTAGA...TGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp GGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCGGCTGTGGGTGCCTCTaGCCAGCTTCTAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GQLTGPRNTVAVCAESGFGCGCL*PASNSR
Trigger: CCTGGAGTTAGAAGCTGGGCAGAGGCACCCACAGCC...GAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp CAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTTGGGCTGTGGGTGCCTCTaGCCAGCTTCTAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: QIPAPRCSQQHRVSCLLLGCGCL*PASNSR
Trigger: CCTGGAGTTAGAAGCTGGGCAGAGGCACCCACAGCC...CAACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp TCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACTTTTCCAGGTGCTTCTaGCAGGGGACTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SHPPKKHFLRPGPDGLRHFSRCF*QGTAGG
Trigger: ACCTCCAGCAGTCCCCTGGCAGAAGCACCTGGAAAA...GTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp ACAGATTCCAGAGCTCTGGGTACGGCCGGCCAATGCTGCTCCCCACCCAACCCCTGCATGTTTTCCAGGTaGTTCTGCCAGGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: TDSRALGTAGQCCSPPNPCMFSR*FCQGTA
Trigger: AGCAGTCCCCTGGCAGAAGCACCTGGAAAACATGCA...GGGGTTGGGTGGGGAGCAGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp TGGGAACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCTGGCCTCCACTGTGCTaGCATCTCTTGGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: WEQGVIPSSQETLPQAWPWPPLC*HLLGTG
Trigger: CCCTGTTCCCAAGAGATGGCAGCACAGTGGAGGCCA...GGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR GCA 90 bp TCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACCCATGGCCTCCACTGTaGTGCCATCTCTTGGGAACA +
Preference number: 4 (lower is better)
Translates to: SHPPKKHFLRPGPDGLRHPWPPL*CHLLGT
Trigger: TGTTCCCAAGAGATGGCAGCACAGTGGAGGCCATGG...GTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR GCA 90 bp GCTGAAAAGGGCAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCAGAGAAGACGTCCCCTaGCCATATCCCATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AEKGNRGLSLRSLACETPREDVP*PYPISS
Trigger: GCTGGAAATGGGATATGGGCAGGGGACGTCTTCTCT...GGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTGCCCTTTTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp AGGCCCAGCACGCTAGGAGATCCATCTTCATGTGACAGAAACGGATTCTCTCCCCTGGATGCGGGAGGCTaGCGTGGAAGCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: RPSTLGDPSSCDRNGFSPLDAGG*RGSHGL
Trigger: GAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAG...GGGAGAGAATCCGTTTCTGTCACATGAAGATGGATCTCCTAGCGTGCTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp GGCAGCCTGAAGGTTGGGGGCAGCGGGCACCACAAGGGGGCAAGAATCCTCAGTCTCTCGATGTGCAGCTaGGGGTGCTTTGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: GSLKVGGSGHHKGARILSLSMCS*GCFVFT
Trigger: TGTGAAGACAAAGCACCCCCAGCTGCACATCGAGAG...ACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACCTCTCGATGTGCAGCTaGGGGTGCTTTGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LPGPRDPQIPAPRCSQQHLSMCS*GCFVFT
Trigger: TGTGAAGACAAAGCACCCCCAGCTGCACATCGAGAG...GTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp TCCTCGCGTTCGTGTTCTCGCCGCTCCCGGTCCACATCCTCGGGATTCCGGGCTATCCGTTCATACTTCTaGCGCTTGGTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSRSCSRRSRSTSSGFRAIRSYF*RLVAAL
Trigger: CAAAGCAGCCACCAAGCGCCAGAAGTATGAACGGAT...AGCCCGGAATCCCGAGGATGTGGACCGGGAGCGGCGAGAACACGAACGCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp GGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCGAGAAGCCCTGCCGGTaGAAGAGGTTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GQLTGPRNTVAVCAESGFEKPCR*KRLRKS
Trigger: GCTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTC...GAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp GGGCCTGGCCTCAGGGTGAAGGTTCCCATTGCATGTTTTCCAGGTGCTTCTGCCGAGAAGCCCTGCCGGTaGAAGAGGTTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GPGLRVKVPIACFPGASAEKPCR*KRLRKS
Trigger: GCTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTC...GGCAGAAGCACCTGGAAAACATGCAATGGGAACCTTCACCCTGAGGCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTACACTAAGCAAACACTaGTCCAATGGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRTLSKH*SNGGSP
Trigger: AGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGTGT...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGGCCGGCTTTGGCTCTaGGACCTGTCACTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: WKSPAREVSHCHLRVGGAGRLWL*DLSLLR
Trigger: TCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCC...AGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TGCTTGAGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGGCTCGGAAAACTCGGTaGGAACTGCCTTCAACTGAC +
Preference number: 4 (lower is better)
Translates to: CLRAGFGSGTCHFSDTDPARKTR*ELPSTD
Trigger: GTCAGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGC...CGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCTCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTGAGCCAGATGCCTTCTaGAAGCAGTCTCCATGGATT +
Preference number: 4 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTREPDAF*KQSPWI
Trigger: AATCCATGGAGACTGCTTCCAGAAGGCATCTGGCTC...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGAGGTGCTCCTGGCCTaGTTGGAAAAGAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: GPASRGTSRKAVRPAAVGEVLLA*LEKRSC
Trigger: GCAAGATCTCTTTTCCAACCAGGCCAGGAGCACCTC...ACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp GGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCTCAGACCAGCAGCAGTaGGTGGAGAGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GQLTGPRNTVAVCAESGFSDQQQ*VERCSW
Trigger: CCAGGAGCACCTCTCCACCCACTGCTGCTGGTCTGA...GAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp CTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACCCACCCGTCATCATATaGACCTCTGTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPGPRDPQIPAPRCSQQHPPVII*TSVLGC
Trigger: ACAGCCAAGGACAGAGGTCCATATGATGACGGGTGG...GTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp TGGGAACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCTCAGAAATGGGGCCCTaGAGTCCAGACCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: WEQGVIPSSQETLPQAWPSEMGP*SPDHRP
Trigger: TGGCCTGTGGTCTGGACTCCAGGGCCCCATTTCTGA...GGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp ACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGCCCTCAAGGACCCCATaGCAGGGCCTTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: TGGHPILPRNTSSGLAPMPSRTP*QGLFHH
Trigger: ATGGTGGAAAAGGCCCTGCCATGGGGTCCTTGAGGG...CATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp GCCGTGGCATTGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCTCTGCCGGGCCCTGCTGCCCATaGTGGCACAAGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AVALSQRLAKDKAVGASAGPCCP*WHKLSA
Trigger: TGCTGACAGCTTGTGCCACCATGGGCAGCAGGGCCC...GGCAGAGGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp TGCCCAGCTTCTAACTCCAGGGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTAGGTGCTCAAGGCCATaGGCCCCATTTGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CPASNSRACLKRDFQEGGRCSRP*APFGAR
Trigger: TCTGGCTCCAAATGGGGCCCATGGCCTTGAGCACCT...ACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCCCTGGAGTTAGAAGCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp AAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGATTCCCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACGT +
Preference number: 4 (lower is better)
Translates to: KSATVISEWVGLCVSPGFPLAAQ*GLRRRR
Trigger: ACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGG...GAATCCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp AGCGGGCACCACAAGGGGGCAAGAATCCTCAGTGCTGAGGGCATCTCATCTTCTTGGCACACTTGTCTGTaGGGCTGGGATCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SGHHKGARILSAEGISSSWHTCL*GWDPGD
Trigger: GTCTCCCGGATCCCAGCCTCACAGACAAGTGTGCCA...AGAAGATGAGATGCCCTCAGCACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp GGCAGCCTGAAGGTTGGGGGCAGCGGGCACCACAAGGGGGCAAGAATCCTCAGTTCCATGGCTCACTCTTaGTTCTCCTCCCGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GSLKVGGSGHHKGARILSSMAHS*FSSRGK
Trigger: TTTTCCACGGGAGGAGAATCAAGAGTGAGCCATGGA...ACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359867.7
CDS-3UTR TCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATTCACACACTCCAGCTTaGTGGCGACTTCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYSHTPA*WRLPHQ
Trigger: CTGGTGAGGAAGTCGCCATCAAGCTGGAGTGTGTGA...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp GTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCAGCTCCGCACCACTTaGTGGACGGGATCCCCACGC +
Preference number: 4 (lower is better)
Translates to: VSKVTRASTRHHMDLCPWQLRTT*WTGSPR
Trigger: GCGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTG...CCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp CCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGGGAGCGGCAGAAGTTaGGGTATGTTGAGAATTCGG +
Preference number: 4 (lower is better)
Translates to: PGIHRSQHPGAANNTGCPGSGRS*GMLRIR
Trigger: CCGAATTCTCAACATACCTCAACTTCTGCCGCTCCC...AGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR TCA 90 bp CAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGACAGAACGTTCTGGATaGAGGAAATGGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: QAPGIHRSQHPGAANNTGTERSG*RKWSHL
Trigger: CAGATGGGACCATTTCCTTCATCCAGAACGTTCTGT...CCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR TCA 90 bp AAGGGACAAAAAGCACAGCTGAGGCTCAGCCTCTTGCGCTCACTGGTCAAGTGGTCCTTCCCGGCCAGCTaGCTGGACCTCGGAACACAG +
Preference number: 4 (lower is better)
Translates to: KGQKAQLRLSLLRSLVKWSFPAS*LDLGTQ
Trigger: CTGTGTTCCGAGGTCCAGTCAGCTGGCCGGGAAGGA...CCACTTGACCAGTGAGCGCAAGAGGCTGAGCCTCAGCTGTGCTTTTTGTCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp TGTTTAATGAGTTCTGGTTCAACACAGAGGCCGCCAACGGGGTCTAGCTATGAGGGGCTGTCACGGGGCTaGGCCTGGCTCGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CLMSSGSTQRPPTGSSYEGLSRG*AWLEEA
Trigger: GGCTTCCTCGAGCCAGGCTCAGCCCCGTGACAGCCC...CTCATAGCTAGACCCCGTTGGCGGCCTCTGTGTTGAACCAGAACTCATTAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR GCA 90 bp GGAAGCAGTCTCCATGGATTCTGCCCTAAAACCAGGAATGGAAGATGGAGCTGCTGCCAGCCGGCTGGATaGGGGAGGCTGGCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSSLHGFCPKTRNGRWSCCQPAG*GRLAWK
Trigger: CTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCA...GCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGGAGACTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp GCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACATTCTCTCCCTTCTCTaGCCTCCTGGTGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: AWFLGLRSEEGQPCSCLHILSLL*PPGEHL
Trigger: GAGATGCTCACCAGGAGGGCAGAGAAGGGAGAGAAT...GTGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR GCA 90 bp TGGCGTCTGGCTCCTGTAGCCTGGTGTTGTCAGGGGAGCATCTGGCAGCCTGAAAAGCGTAGCGGGCCGTaGCGGTCAGGTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: WRLAPVAWCCQGSIWQPEKRSGP*RSGSCF
Trigger: AAAACAAGAACCTGACCGGCACGGCCCGCTACGCTT...TTCAGGCTGCCAGATGCTCCCCTGACAACACCAGGCTACAGGAGCCAGACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp CAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTCTGGCGCTTGGTGGCTaGTTTGAGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QQSHTSIHPSSYGPLSLALALGG*FEPLPG
Trigger: CCCTGGCAGGGGCTCAAAGCAGCCACCAAGCGCCAG...AGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp CAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTTGGCCGGTGGAAGAGGTTaGGGAAGAGCTGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: QIPAPRCSQQHRVSCLLLAGGRG*GRADVG
Trigger: ACCTACGTCAGCTCTTCCGCAACCTCTTCCACCGGC...CAACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp AGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCTACAAAACGGAGCCGGTTGGCAGTaGCCCCCGTGGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPALFMPPLSCVDEFLQNGAGWQ*PPWVGQ
Trigger: CTGGCCCACCCACGGGGGCCACTGCCAACCGGCTCC...GTTTTGTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR CCA 90 bp GCGTATCTCCTGGATTCTGAGGCTCGGAAAACTCGGTGGGAACTGCCTTCAACTCTGAGGAGGAGACGTTaGCGGGCGCACCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: AYLLDSEARKTRWELPSTLRRRR*RAHPCA
Trigger: TGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAG...AGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TCGCCGCTCCCGGTCCACATCCTCGGGATTCCGGGCTGCACCCTAGTTCATCCTCCTCACTTCCCGAGATaGTCAAATGGCACACTTGTC +
Preference number: 4 (lower is better)
Translates to: SPLPVHILGIPGCTLVHPPHFPR*SNGTLV
Trigger: GACAAGTGTGCCATTTGACCATCTCGGGAAGTGAGG...AGGATGAACTAGGGTGCAGCCCGGAATCCCGAGGATGTGGACCGGGAGCGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp CCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCTGTCCTCACTTCCCGAGATaGTCAAATGGCACACTTGTC +
Preference number: 4 (lower is better)
Translates to: PPWTAWFLGLRSEEGQPCPHFPR*SNGTLV
Trigger: GACAAGTGTGCCATTTGACCATCTCGGGAAGTGAGG...ACAGGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCAAACACTGGTCCAATaGGGGCTCTCCTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYQTLVQ*GLSSLP
Trigger: GGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTG...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGCCTGAGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGCAAACACTGGTCCAATaGGGGCTCTCCTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: GLRSEEGQPCSCLHSLVWQTLVQ*GLSSLP
Trigger: GGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTG...CCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp AGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCTTTCTAAGCAAACACTaGTCCAATGGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPPWTAWFLGLRSEEGQPFLSKH*SNGGSP
Trigger: AGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGAAA...GGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366216.6
CDS-3UTR CCA 90 bp AGGCCCAGCACGCTAGGAGATCCATCTTCATGTGACAGAAACGGATTCTCTCCCCTGCCCAGCCCGCCATaGACAGCTTGGTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPSTLGDPSSCDRNGFSPLPSPP*TAWFLG
Trigger: GCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAG...GGGAGAGAATCCGTTTCTGTCACATGAAGATGGATCTCCTAGCGTGCTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATATGCGGCTGATCATCTaGTCGGCCAAGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHMRLII*SAKSST
Trigger: GGTGCTGCTCTTGGCCGACCAGATGATCAGCCGCAT...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCATCCGTTCATACTTCTaGCGCTTGGTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PQGSTDPSTPVQPTTQGVIRSYF*RLVAAL
Trigger: CAAAGCAGCCACCAAGCGCCAGAAGTATGAACGGAT...GACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp TTCCTCTCCCGGTCGACCCGCGAGATCGCTCTGGGAGAAGTATTGCCAGCCGGCTGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLSRSTREIALGEVLPAGCRGPR*ALTSSS
Trigger: AGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCA...GCCGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGGTCGACCGGGAGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp CGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGACCAGGAATGGAAGATaGAGCTGCCACCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: REVSHCHLRVGGAVRISWTRNGR*SCHRLM
Trigger: CATCAGCCGGTGGCAGCTCCATCTTCCATTCCTGGT...CCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGGCCTGGCCTCAGGGTGAAGGTTCCCATTGCATGTTTTCCAGGTGCTTCTGCCGCCACTGGAGGGCAGTaGCATGATCTCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: GPGLRVKVPIACFPGASAATGGQ*HDLSSL
Trigger: GAGTGAGCTGAGATCATGCCACTGCCCTCCAGTGGC...GGCAGAAGCACCTGGAAAACATGCAATGGGAACCTTCACCCTGAGGCCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp GTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCCTTGCCGGATGTGGTaGCCACTGGAGGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VSKVTRASTRHHMDLCPWPCRMW*PLEGSG
Trigger: GCCACTGCCCTCCAGTGGCCACCACATCCGGCAAGG...CCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CCA 90 bp CAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCGAAAAGAGATCTTGCTaGCTAGACAGTCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: QAPCGQWPPSLPQAVLALEKRSC*LDSLVR
Trigger: TCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTC...GAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCGGGGACTGCTGGAGGTaGTTCAGCTCACTACAGTGG +
Preference number: 4 (lower is better)
Translates to: GQLTGPRNTVAVCAESGFGDCWR*FSSLQW
Trigger: CCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCC...GAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp CATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCTGTCCTGTCTACTGTTaGGTAGCATGGGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HPILPRNTSSGLAPMGSGCPVYC*VAWEGP
Trigger: AGGCCCTTCCCATGCTACCCAACAGTAGACAGGACA...GCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTCCACCCGTCATCATATaGACCTCTGTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PGIHRSQHPGAANNTGCPPPVII*TSVLGC
Trigger: ACAGCCAAGGACAGAGGTCCATATGATGACGGGTGG...AGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp CAATTTCACAGATTCCAGAGCTCTGGGTACGGCCGGCCAATGCTGCTCCCCACCTGGCGACATCAGAAATaGGGCCCTGGAGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: QFHRFQSSGYGRPMLLPTWRHQK*GPGVQT
Trigger: GGTCTGGACTCCAGGGCCCCATTTCTGATGTCGCCA...GGTGGGGAGCAGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTGTGAAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCTCAAGTGGCAAATTTTaGAAAAGCCAGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HQAPCGQWPPSLPQAVLASSGKF*KSQTSE
Trigger: CTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGA...GGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp GGCAGCCTGAAGGTTGGGGGCAGCGGGCACCACAAGGGGGCAAGAATCCTCAGTGAAGTTGAGGTATGTTaGGAATTCGGAGGGATAGCC +
Preference number: 4 (lower is better)
Translates to: GSLKVGGSGHHKGARILSEVEVC*EFGGIA
Trigger: GGCTATCCCTCCGAATTCTCAACATACCTCAACTTC...ACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp CGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGGTATCTCCTGGATTCTaGGGCTCGGAAAACTCGGTG +
Preference number: 4 (lower is better)
Translates to: REVSHCHLRVGGAVRISWVSPGF*GSENSV
Trigger: CACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATAC...CCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp TGCCCAGCTTCTAACTCCAGGGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCTGGTCTTAAACTCCTaGCCTCAAGTCATCCGCCCT +
Preference number: 4 (lower is better)
Translates to: CPASNSRACLKRDFQEGGLVLNS*PQVIRP
Trigger: AGGGCGGATGACTTGAGGTCAGGAGTTTAAGACCAG...ACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCCCTGGAGTTAGAAGCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR TCA 90 bp GCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGTTCCTTCCCGGCCAGCTaGCTGGACCTCGGAACACAG +
Preference number: 4 (lower is better)
Translates to: AKSHEHPPVIIWTSVLGCSFPAS*LDLGTQ
Trigger: CTGTGTTCCGAGGTCCAGTCAGCTGGCCGGGAAGGA...ACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp TCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATGGGCTGTCACGGGGCTaGGCCTGGCTCGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SCAHWSSGKFWKSQTSEDGLSRG*AWLEEA
Trigger: GGCTTCCTCGAGCCAGGCTCAGCCCCGTGACAGCCC...ATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR GCA 90 bp CAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTTGAAGCGTAGCGGGCCGTaGCGGTCAGGTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: QIPAPRCSQQHRVSCLLLKRSGP*RSGSCF
Trigger: AAAACAAGAACCTGACCGGCACGGCCCGCTACGCTT...CAACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp GCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGCTGGCGCTTGGTGGCTaGTTTGAGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASCAHWSSGKFWKSQTSELALGG*FEPLPG
Trigger: CCCTGGCAGGGGCTCAAAGCAGCCACCAAGCGCCAG...CTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR GCA 90 bp CAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCCAGCTTCTGCCAGGGGACTaGTGGAGGTGGTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QLTGPRNTVAVCAESGFQLLPGD*WRWFSS
Trigger: TGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAG...CTGGAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp AGCACGCTAGGAGATCCATCTTCATGTGACAGAAACGGATTCTCTCCCTTCTCTCACTGCGGAGCCGGTTaGCAGTGGCCCCCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: STLGDPSSCDRNGFSPFSHCGAG*QWPPWV
Trigger: CACCCACGGGGGCCACTGCCAACCGGCTCCGCAGTG...AGAGAAGGGAGAGAATCCGTTTCTGTCACATGAAGATGGATCTCCTAGCGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp AGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCTACAAAACCACTGCGGAGCCGGTTaGCAGTGGCCCCCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RPALFMPPLSCVDEFLQNHCGAG*QWPPWV
Trigger: CACCCACGGGGGCCACTGCCAACCGGCTCCGCAGTG...GTTTTGTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR CCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCGTATTGCCAGCCGGCTaGATGCGGGAGGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSVLPAG*MREAGV
Trigger: CACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATAC...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CTCATACTCACCTTCCTCTCCCGGTCGACCCGCGAGATCGCTCTGGGAGAAGTACAAACACTGGTCCAATaGGGGCTCTCCTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: LILTFLSRSTREIALGEVQTLVQ*GLSSLP
Trigger: GGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTG...TACTTCTCCCAGAGCGATCTCGCGGGTCGACCGGGAGAGGAAGGTGAGTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CCA 90 bp CAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGACAAACACTGGTCCAATaGGGGCTCTCCTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: QISAQPAMDSLVPGPEIRQTLVQ*GLSSLP
Trigger: GGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTG...TCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp CAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGATGAAGTTCTTGGAGTaGATATACTCGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QAPGIHRSQHPGAANNTGMKFLE*IYSMRL
Trigger: CAGCCGCATCGAGTATATCCACTCCAAGAACTTCAT...CCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp CCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTATCCGTTCATACTTCTaGCGCTTGGTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PGIHRSQHPGAANNTGCPIRSYF*RLVAAL
Trigger: CAAAGCAGCCACCAAGCGCCAGAAGTATGAACGGAT...AGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp GCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCCTCTCTGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALALGPVTSPTRTRPVPLCRGPR*ALTSSS
Trigger: AGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCA...GAGAGGAACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GCGTATCTCCTGGATTCTGAGGCTCGGAAAACTCGGTGGGAACTGCCTTCAACTTGGCAGCCTGAAGGTTaGGGGCAGCGGGCACCACAA +
Preference number: 4 (lower is better)
Translates to: AYLLDSEARKTRWELPSTWQPEG*GQRAPQ
Trigger: TTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCCA...AGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TGGCGTCTGGCTCCTGTAGCCTGGTGTTGTCAGGGGAGCATCTGGCAGCCTGAAACTGTCATCTCAGAGTaGGTGGGGCTGTGCGTATCT +
Preference number: 4 (lower is better)
Translates to: WRLAPVAWCCQGSIWQPETVISE*VGLCVS
Trigger: AGATACGCACAGCCCCACCCACTCTGAGATGACAGT...TTCAGGCTGCCAGATGCTCCCCTGACAACACCAGGCTACAGGAGCCAGACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GCCGTGGCATTGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCTCTGCCGGGGACTGCTGGAGGTaGTTCAGCTCACTACAGTGG +
Preference number: 4 (lower is better)
Translates to: AVALSQRLAKDKAVGASAGDCWR*FSSLQW
Trigger: CCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCC...GGCAGAGGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp CAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCCAGGTGCAGGTAGCCACCTaGGATGTGCAGAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: QLTGPRNTVAVCAESGFQVQVAT*DVQNRS
Trigger: GCTCCTGTTCTGCACATCCCAGGTGGCTACCTGCAC...CTGGAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp TCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCTGGCACACTTGTCTGTaGGGCTGGGATCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SEEGQPCSCLHSLVWMNFWHTCL*GWDPGD
Trigger: GTCTCCCGGATCCCAGCCTCACAGACAAGTGTGCCA...GAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR TCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATGACCTCGATGGGCGTTaGCATCTTCTTCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHDLDGR*HLLLAD
Trigger: ATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTC...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp GCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCCTCTCGAAGTTGAGGTATGTTaGGAATTCGGAGGGATAGCC +
Preference number: 4 (lower is better)
Translates to: ALALGPVTSPTRTRPVPLEVEVC*EFGGIA
Trigger: GGCTATCCCTCCGAATTCTCAACATACCTCAACTTC...GAGAGGAACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp GGTGCTTCTGCCAGGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGGAAGTTGAGGTATGTTaGGAATTCGGAGGGATAGCC +
Preference number: 4 (lower is better)
Translates to: GASARGLLEVVQLTTVAVEVEVC*EFGGIA
Trigger: GGCTATCCCTCCGAATTCTCAACATACCTCAACTTC...CACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR TCA 90 bp CTTGTCTGTGAGGCTGGGATCCGGGAGACCTCTTGCCGCCCAGTGAGGTCTGAGGAAGTTGAGGTATGTTaGGAATTCGGAGGGATAGCC +
Preference number: 4 (lower is better)
Translates to: LVCEAGIRETSCRPVRSEEVEVC*EFGGIA
Trigger: GGCTATCCCTCCGAATTCTCAACATACCTCAACTTC...CTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGATCCCAGCCTCACAGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR TCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATGGAACTGCCTTCAACTaGCTACACCACTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHGTAFN*LHHSLM
Trigger: CATCAGGGAGTGGTGTAGTCAGTTGAAGGCAGTTCC...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp TCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGTGTTGAATCCTTCCCGGCCAGCTaGCTGGACCTCGGAACACAG +
Preference number: 4 (lower is better)
Translates to: SHEHPPVIIWTSVLGCVESFPAS*LDLGTQ
Trigger: CTGTGTTCCGAGGTCCAGTCAGCTGGCCGGGAAGGA...TTCAACACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp CCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGCTCACTCTGGCCCTCTaGGTCAGGGCCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PLALTGQVANFGKARPQRLTLAL*VRAFPI
Trigger: GATGGGGAAGGCCCTGACTCAGAGGGCCAGAGTGAG...CCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp AGAGAAGAGAAGCCCAAGACCAATGTGCCGACCTTGGCTTCCAGGAGAACAGAGGCTCTGGGACCCCAGTaGGGTCAACCACACTGTCCA +
Preference number: 4 (lower is better)
Translates to: REEKPKTNVPTLASRRTEALGPQ*GQPHCP
Trigger: TGGACAGTGTGGTTGACCTCACTGGGGTCCCAGAGC...CTCTGTTCTCCTGGAAGCCAAGGTCGGCACATTGGTCTTGGGCTTCTCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp GCCGTGGCATTGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCTCTGCCGACAAAAAGCACAGCTaGGGCTCAGCCTCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: AVALSQRLAKDKAVGASADKKHS*GSASCA
Trigger: AGCGCAAGAGGCTGAGCCTCAGCTGTGCTTTTTGTC...GGCAGAGGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp TGTAAAGTTGAGTCCCCCGACGTGTCGGACTACTGCCTAAGCAAACACTGGTCCATCCGGGAGACCTCTTaGCGCCCAGTGAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: CKVESPDVSDYCLSKHWSIRETS*RPVRSE
Trigger: CTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGAT...GGACCAGTGTTTGCTTAGGCAGTAGTCCGACACGTCGGGGGACTCAACTTTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR GCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGACTGGCGCTTGGTGGCTaGTTTGAGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRLALGG*FEPLPG
Trigger: CCCTGGCAGGGGCTCAAAGCAGCCACCAAGCGCCAG...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR GCA 90 bp CCTGCCCATATCCCATTTCCAGCCTTGCTGAAAAGGGCAACAGAGGCCTCTCCCTCTAACTCCAGGGCCTaGCTCAAGAGGGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PAHIPFPALLKRATEASPSNSRA*LKRDFQ
Trigger: CTGGAAGTCCCTCTTGAGGCAGGCCCTGGAGTTAGA...GGGAGAGGCCTCTGTTGCCCTTTTCAGCAAGGCTGGAAATGGGATATGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp GGTGCTTCTGCCAGGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGGGTGAAGGTTCCCATTaGATGTTTTCCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GASARGLLEVVQLTTVAVGEGSH*MFSRCF
Trigger: GAAGCACCTGGAAAACATGCAATGGGAACCTTCACC...CACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp GCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGTATCCCAGCACCCCGGTaGAGCCAACAACACAGGGTG +
Preference number: 4 (lower is better)
Translates to: AKSHEHPPVIIWTSVLGCIPAPR*SQQHRV
Trigger: CACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGAT...ACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCCTCACTTCCCGAGATaGTCAAATGGCACACTTGTC +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYPHFPR*SNGTLV
Trigger: GACAAGTGTGCCATTTGACCATCTCGGGAAGTGAGG...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCCACACGTAGCTCCATaGCTCACTCTTGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYPHVAP*LTLDSP
Trigger: AGGAGAATCAAGAGTGAGCCATGGAGCTACGTGTGG...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359867.7
CDS-3UTR CCA 90 bp GGGCCTGGCCTCAGGGTGAAGGTTCCCATTGCATGTTTTCCAGGTGCTTCTGCCCACCAGAGGCGATGTTaGCACCCAGGTAGATATCTC +
Preference number: 4 (lower is better)
Translates to: GPGLRVKVPIACFPGASAHQRRC*HPGRYL
Trigger: GAGATATCTACCTGGGTGCCAACATCGCCTCTGGTG...GGCAGAAGCACCTGGAAAACATGCAATGGGAACCTTCACCCTGAGGCCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp CACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTCTCTCGATGTGCAGCTaGGGGTGCTTTGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: HRSQHPGAANNTGCPVYCLSMCS*GCFVFT
Trigger: TGTGAAGACAAAGCACCCCCAGCTGCACATCGAGAG...ACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp ACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGATCCGTTCATACTTCTaGCGCTTGGTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TGGHPILPRNTSSGLAPMIRSYF*RLVAAL
Trigger: CAAAGCAGCCACCAAGCGCCAGAAGTATGAACGGAT...CATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp ACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGTGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TGGHPILPRNTSSGLAPMCRGPR*ALTSSS
Trigger: AGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCA...CATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp CGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGACACTAAGCAAACACTaGTCCAATGGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: REVSHCHLRVGGAVRISWTLSKH*SNGGSP
Trigger: AGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGTGT...CCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATGAGCCAGATGCCTTCTaGAAGCAGTCTCCATGGATT +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYEPDAF*KQSPWI
Trigger: AATCCATGGAGACTGCTTCCAGAAGGCATCTGGCTC...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGGCCTGGCCTCAGGGTGAAGGTTCCCATTGCATGTTTTCCAGGTGCTTCTGCCAGCCTCCCAAGCAGCTaGGATTACAGGAACACACCA +
Preference number: 4 (lower is better)
Translates to: GPGLRVKVPIACFPGASASLPSS*DYRNTP
Trigger: TGGTGTGTTCCTGTAATCCCAGCTGCTTGGGAGGCT...GGCAGAAGCACCTGGAAAACATGCAATGGGAACCTTCACCCTGAGGCCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp TCAAGGCCATGGGCCCCATTTGGAGCCAGAAGGTCTAGGGTGAAGTCAGAGAAGGCCACTGGAGGGCAGTaGCATGATCTCAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: SRPWAPFGARRSRVKSEKATGGQ*HDLSSL
Trigger: GAGTGAGCTGAGATCATGCCACTGCCCTCCAGTGGC...CTTCTCTGACTTCACCCTAGACCTTCTGGCTCCAAATGGGGCCCATGGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp TTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGTCCACAGAACGTTCTaGATGAAGGAAATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FQAPGIHRSQHPGAANNTVHRTF*MKEMVP
Trigger: TGGGACCATTTCCTTCATCCAGAACGTTCTGTGGAC...TGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp ACAATTTCACAGATTCCAGAGCTCTGGGTACGGCCGGCCAATGCTGCTCCCCACCAAAGGATAAGGCTGTaGGTGCCTCTGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TISQIPELWVRPANAAPHQRIRL*VPLPSF
Trigger: GAAGCTGGGCAGAGGCACCCACAGCCTTATCCTTTG...GTGGGGAGCAGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTGTGAAATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp AAGGGACAAAAAGCACAGCTGAGGCTCAGCCTCTTGCGCTCACTGGTCAAGTGGCTGCCAGGGGACTGCTaGAGGTGGTTCAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: KGQKAQLRLSLLRSLVKWLPGDC*RWFSSL
Trigger: TAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAG...CCACTTGACCAGTGAGCGCAAGAGGCTGAGCCTCAGCTGTGCTTTTTGTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCTGTCCTGTCTACTGTTaGGTAGCATGGGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GQLTGPRNTVAVCAESGFCPVYC*VAWEGP
Trigger: AGGCCCTTCCCATGCTACCCAACAGTAGACAGGACA...GAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp AGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTTCCCGGCCAGCTGACTaGACCTCGGAACACAGTGGC +
Preference number: 4 (lower is better)
Translates to: RSAKSHEHPPVIIWTSVLSRPAD*TSEHSG
Trigger: GCCACTGTGTTCCGAGGTCCAGTCAGCTGGCCGGGA...AAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp CAGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGCCCTGCTGCCCATGGTaGCACAAGCTGTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: QPLALTGQVANFGKARPQPCCPW*HKLSAR
Trigger: CCGTGCTGACAGCTTGTGCCACCATGGGCAGCAGGG...CTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCTGGCACACTTGTCTGTaGGGCTGGGATCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSWHTCL*GWDPGD
Trigger: GTCTCCCGGATCCCAGCCTCACAGACAAGTGTGCCA...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp TGGGAACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCGAAGTTGAGGTATGTTaGGAATTCGGAGGGATAGCC +
Preference number: 4 (lower is better)
Translates to: WEQGVIPSSQETLPQAWPEVEVC*EFGGIA
Trigger: GGCTATCCCTCCGAATTCTCAACATACCTCAACTTC...GGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR TCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAAGCTGTCAGCACGGATaGGGCTGGAGGGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRSCQHG*GWRALG
Trigger: TCCCAGAGCCCTCCAGCCTCATCCGTGCTGACAGCT...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp CCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCTACAAAACAGAGCGGACCCCCGTAGCTaGCCCATCCTCTCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: PALFMPPLSCVDEFLQNRADPRS*PILSSR
Trigger: ACGCGAGGAGAGGATGGGGCAGCTACGGGGGTCCGC...TCTGTTTTGTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR GCA 90 bp CAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCTACAAAACAGACTGCCAGCCGGCTGGATaGGGGAGGCTGGCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QPCSCLHSLVWMNFYKTDCQPAG*GRLAWK
Trigger: CTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCA...GTCTGTTTTGTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR GCA 90 bp AGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATGGCCAGCCCTGTTCATaGCTCCACTCTCTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSEEGQPCSCLHSLVWMNGQPCS*LHSLVW
Trigger: CCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCC...ATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR GCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATAAACTCGGTGGGAACTaGCTTCAACTGACTACACCA +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYKLGGN*LQLTTP
Trigger: TGGTGTAGTCAGTTGAAGGCAGTTCCCACCGAGTTT...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp GCGTATCTCCTGGATTCTGAGGCTCGGAAAACTCGGTGGGAACTGCCTTCAACTAATGGAAGATGGAGCTaGCACCGGCTGATGACGGGC +
Preference number: 4 (lower is better)
Translates to: AYLLDSEARKTRWELPSTNGRWS*HRLMTG
Trigger: GCCCGTCATCAGCCGGTGGCAGCTCCATCTTCCATT...AGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTCCTCACTTCCCGAGATaGTCAAATGGCACACTTGTC +
Preference number: 4 (lower is better)
Translates to: WKSPAREVSHCHLRVGGAPHFPR*SNGTLV
Trigger: GACAAGTGTGCCATTTGACCATCTCGGGAAGTGAGG...AGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp AGCACGCTAGGAGATCCATCTTCATGTGACAGAAACGGATTCTCTCCCTTCTCTCTGCCCAGCCCGCCATaGACAGCTTGGTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: STLGDPSSCDRNGFSPFSLPSPP*TAWFLG
Trigger: GCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAG...AGAGAAGGGAGAGAATCCGTTTCTGTCACATGAAGATGGATCTCCTAGCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp AGCGGGCACCACAAGGGGGCAAGAATCCTCAGTGCTGAGGGCATCTCATCTTCTCACCAGAGGCGATGTTaGCACCCAGGTAGATATCTC +
Preference number: 4 (lower is better)
Translates to: SGHHKGARILSAEGISSSHQRRC*HPGRYL
Trigger: GAGATATCTACCTGGGTGCCAACATCGCCTCTGGTG...AGAAGATGAGATGCCCTCAGCACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp AGCGGGCACCACAAGGGGGCAAGAATCCTCAGTGCTGAGGGCATCTCATCTTCTCTCTCGATGTGCAGCTaGGGGTGCTTTGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: SGHHKGARILSAEGISSSLSMCS*GCFVFT
Trigger: TGTGAAGACAAAGCACCCCCAGCTGCACATCGAGAG...AGAAGATGAGATGCCCTCAGCACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GCGTATCTCCTGGATTCTGAGGCTCGGAAAACTCGGTGGGAACTGCCTTCAACTATGCGGCTGATCATCTaGTCGGCCAAGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: AYLLDSEARKTRWELPSTMRLII*SAKSST
Trigger: GGTGCTGCTCTTGGCCGACCAGATGATCAGCCGCAT...AGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGGGCTCAGGCACATGAAGTTCTTGGAGTaGATATACTCGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SHPPKKHFLRPGPDGLRHMKFLE*IYSMRL
Trigger: CAGCCGCATCGAGTATATCCACTCCAAGAACTTCAT...GTGCCTGAGCCCATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATGCTGTGCGTATCTCCTaGATTCTGAGGCTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHAVRIS*ILRLGK
Trigger: TTTTCCGAGCCTCAGAATCCAGGAGATACGCACAGC...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATTGGCACCTGCTGTCTTaGGAAACACAGGTCAATACA +
Preference number: 4 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYWHLLS*ETQVNT
Trigger: TGTATTGACCTGTGTTTCCCAAGACAGCAGGTGCCA...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGTGGCACCTGCTGTCTTaGGAAACACAGGTCAATACA +
Preference number: 4 (lower is better)
Translates to: REVSHCHLRVGGAVRISWWHLLS*ETQVNT
Trigger: TGTATTGACCTGTGTTTCCCAAGACAGCAGGTGCCA...CCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GGGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGAAAAGAGATCTTGCTaGCTAGACAGTCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GPASRGTSRKAVRPAAVGEKRSC*LDSLVR
Trigger: TCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTC...ACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp GCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGTCAGACCAGCAGCAGTaGGTGGAGAGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ASCAHWSSGKFWKSQTSESDQQQ*VERCSW
Trigger: CCAGGAGCACCTCTCCACCCACTGCTGCTGGTCTGA...CTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTCTGCCAGGGGACTGCTaGAGGTGGTTCAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: QQSHTSIHPSSYGPLSLALPGDC*RWFSSL
Trigger: TAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAG...AGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp TGGGAACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCGTGTTTAATGAGTTCTaGTTCAACACAGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: WEQGVIPSSQETLPQAWPVFNEF*FNTEAA
Trigger: GGCGGCCTCTGTGTTGAACCAGAACTCATTAAACAC...GGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGAGGCTGGAGGGCTCTaGGACCCCAGTGAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLREAGGL*DPSEVN
Trigger: GTTGACCTCACTGGGGTCCCAGAGCCCTCCAGCCTC...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp CACCCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCACTCTCTTGTGTGGATaGATTTCTAAGCAAACACTG +
Preference number: 4 (lower is better)
Translates to: HPTPKYLPSPPWTAWFLGTLLCG*ISKQTL
Trigger: CAGTGTTTGCTTAGAAATTCATCCACACAAGAGAGT...GCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366216.6
CDS-3UTR TCA 90 bp AAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGATTCGACCTCGATGGGCGTTaGCATCTTCTTCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: KSATVISEWVGLCVSPGFDLDGR*HLLLAD
Trigger: ATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTC...GAATCCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp ACAGTGGCCGTGGCATTGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCGGGAGCGGCAGAAGTTaGGGTATGTTGAGAATTCGG +
Preference number: 4 (lower is better)
Translates to: TVAVALSQRLAKDKAVGAGSGRS*GMLRIR
Trigger: CCGAATTCTCAACATACCTCAACTTCTGCCGCTCCC...GGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGCCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR TCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATAAGAATCCTCAGTGCTaGGGGCATCTCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHKNPQC*GHLIFL
Trigger: CAAGAAGATGAGATGCCCTCAGCACTGAGGATTCTT...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp AAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGATTCGTATCTCCTGGATTCTaGGGCTCGGAAAACTCGGTG +
Preference number: 4 (lower is better)
Translates to: KSATVISEWVGLCVSPGFVSPGF*GSENSV
Trigger: CACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATAC...GAATCCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAAGAAAGCAAGCACCATaGCTGGGTCCAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRRKQAP*LGPGWP
Trigger: GGGCCAGCCTGGACCCAGTCATGGTGCTTGCTTTCT...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGACGGAGGGATAGCCTTTaGAGAGGACCTCGATGGGCG +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRRRDSL*RGPRWA
Trigger: CGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCG...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR GCA 90 bp TCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGTGTTGAAGCCGGTGGAAGAGGTTaGGGAAGAGCTGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: SHEHPPVIIWTSVLGCVEAGGRG*GRADVG
Trigger: ACCTACGTCAGCTCTTCCGCAACCTCTTCCACCGGC...TTCAACACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp CAGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGGCCGGTGGAAGAGGTTaGGGAAGAGCTGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: QPLALTGQVANFGKARPQAGGRG*GRADVG
Trigger: ACCTACGTCAGCTCTTCCGCAACCTCTTCCACCGGC...CTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR GCA 90 bp AACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTTCCATGGCTCACTCTTaGCCGCCGGGAAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: NIKGQQSHTSIHPSSYGPSMAHS*PPGRRR
Trigger: TCGGCGCCTTCCCGGCGGGCAAGAGTGAGCCATGGA...AGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp AGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTCTTCTGCCAGGGGACTaGTGGAGGTGGTTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RSAKSHEHPPVIIWTSVLLLPGD*WRWFSS
Trigger: TGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAG...AAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp CAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTTTTTCCAGGTGCTTCTaGCAGGGGACTGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QQSHTSIHPSSYGPLSLAFSRCF*QGTAGG
Trigger: ACCTCCAGCAGTCCCCTGGCAGAAGCACCTGGAAAA...AGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp ACAGTGGCCGTGGCATTGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGTGCCTGCATGTTTTCCAGGTaGTTCTGCCAGGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: TVAVALSQRLAKDKAVGACMFSR*FCQGTA
Trigger: AGCAGTCCCCTGGCAGAAGCACCTGGAAAACATGCA...GGCACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR GCA 90 bp GGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCCAGGCCCCAGGGATCCACAGGTGAAGGTTCCCATTaGATGTTTTCCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GTQWLYVLRVASRPQGSTGEGSH*MFSRCF
Trigger: GAAGCACCTGGAAAACATGCAATGGGAACCTTCACC...TGTGGATCCCTGGGGCCTGGAAGCCACTCTCAGCACATACAGCCACTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR GCA 90 bp GCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGTCAGTGGGTGGAGAGGTaGTCCTGGCGAATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AKSHEHPPVIIWTSVLGCQWVER*SWRISA
Trigger: TGCTGAAATTCGCCAGGAGCACCTCTCCACCCACTG...ACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413574.6
CDS-3UTR GCA 90 bp TCAAGGCCATGGGCCCCATTTGGAGCCAGAAGGTCTAGGGTGAAGTCAGAGAAGGAGACCCCCATTCTCTaGCTGACCTCTGTGTTACTC +
Preference number: 4 (lower is better)
Translates to: SRPWAPFGARRSRVKSEKETPIL*LTSVLL
Trigger: GAGTAACACAGAGGTCAGGCAGAGAATGGGGGTCTC...CTTCTCTGACTTCACCCTAGACCTTCTGGCTCCAAATGGGGCCCATGGCCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGACTGAGGTCCCTAGCCTaGGAGACCCCCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRLRSLA*ETPILC
Trigger: GCAGAGAATGGGGGTCTCGCAGGCTAGGGACCTCAG...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCTAAGCAAACACTGGTCCCTGAGGAGGAGACGTTaGCGGGCGCACCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LFMPPLSCVDEFLSKHWSLRRRR*RAHPCA
Trigger: TGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAG...GGACCAGTGTTTGCTTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366216.6
CDS-3UTR CCA 90 bp CAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCCAGTGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QLTGPRNTVAVCAESGFQCRGPR*ALTSSS
Trigger: AGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCA...CTGGAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CCA 90 bp CTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCGAGAAGCCCTGCCGGTaGAAGAGGTTGCGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LALTGQVANFGKARPQRIEKPCR*KRLRKS
Trigger: GCTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTC...GATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR CCA 90 bp AAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATCTCCTGGATTCGCTCGGAAAACTCGGTaGGAACTGCCTTCAACTGAC +
Preference number: 4 (lower is better)
Translates to: KSATVISEWVGLCVSPGFARKTR*ELPSTD
Trigger: GTCAGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGC...GAATCCAGGAGATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GCGTATCTCCTGGATTCTGAGGCTCGGAAAACTCGGTGGGAACTGCCTTCAACTTCATCTCAGAGTGGGTaGGGCTGTGCGTATCTCCTG +
Preference number: 4 (lower is better)
Translates to: AYLLDSEARKTRWELPSTSSQSG*GCAYLL
Trigger: CAGGAGATACGCACAGCCCCACCCACTCTGAGATGA...AGTTGAAGGCAGTTCCCACCGAGTTTTCCGAGCCTCAGAATCCAGGAGATACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCAGGCCAGGGGGACAATaGAAAAGCCCAGCACGGGAA +
Preference number: 4 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSRPGGQ*KSPARE
Trigger: TTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCT...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGATGAGCCACCAGGCCTaGCCGACATTTCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: VSKVTRASTRHHMDLCPWMSHQA*PTFPVL
Trigger: CAAGACTGGAAATGTCGGCCAGGCCTGGTGGCTCAT...CCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CCA 90 bp TCAAGGCCATGGGCCCCATTTGGAGCCAGAAGGTCTAGGGTGAAGTCAGAGAAGTGCTCCTGGCCTGGTTaGAAAAGAGATCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRPWAPFGARRSRVKSEKCSWPG*KRDLAG
Trigger: GCCAGCAAGATCTCTTTTCCAACCAGGCCAGGAGCA...CTTCTCTGACTTCACCCTAGACCTTCTGGCTCCAAATGGGGCCCATGGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GCCTGGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTTGTGAGACTCCATAAGTCCCGGCCAGCTGACTaGACCTCGGAACACAGTGGC +
Preference number: 4 (lower is better)
Translates to: AWLEKRSCWLDSLVRLHKSRPAD*TSEHSG
Trigger: GCCACTGTGTTCCGAGGTCCAGTCAGCTGGCCGGGA...CTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp AGCACAGCTGAGGCTCAGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAATCCTTACCAGTACGTaGGTGAGTACGTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: STAEAQPLALTGQVANFGILTST*VSTWAQ
Trigger: CTGGGCCCACGTACTCACCCACGTACTGGTAAGGAT...TCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCTGAGCCTCAGCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
3UTR CAA 72 bp CTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGGCATaGAGTCAGAGATTGGCAAAGGATAAGGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LEVVQLTTVAVA*SQRLAKDKAVG
Trigger: ACCCACAGCCTTATCCTTTGCCAATCTCTGACTCAATGCCACGGCCACTGTAGTGAGCTGAACCACCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR TCA 90 bp AAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTCACACACTCCAGCTTaGTGGCGACTTCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: KVSKVTRASTRHHMDLCPSHTPA*WRLPHQ
Trigger: CTGGTGAGGAAGTCGCCATCAAGCTGGAGTGTGTGA...AGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp AGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTTCACACACTCCAGCTTaGTGGCGACTTCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: RSAKSHEHPPVIIWTSVLSHTPA*WRLPHQ
Trigger: CTGGTGAGGAAGTCGCCATCAAGCTGGAGTGTGTGA...AAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp CAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGACCTCGATGGGCGTTaGCATCTTCTTCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: QQSHTSIHPSSYGPLSLADLDGR*HLLLAD
Trigger: ATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTC...AGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp AAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTCAGTGGCCGTGGCATTaGGTCAGAGATTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KVSKVTRASTRHHMDLCPQWPWH*VRDWQR
Trigger: CCTTTGCCAATCTCTGACTCAATGCCACGGCCACTG...AGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGATTACCAGTACGTGGGTaGGTACGTGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRLPVRG*VRGPST
Trigger: TGTGCTGGGCCCACGTACTCACCCACGTACTGGTAA...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR TCA 90 bp GCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGCCTTGGCCTCCAGGTaGCTCACGAATTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: ASCAHWSSGKFWKSQTSEALASR*LTNFSM
Trigger: CATGCTGAAATTCGTGAGTCACCTGGAGGCCAAGGC...CTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp AGCACAGCTGAGGCTCAGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGACATTTCCAGCCTTGCTaGAAAGGGCAACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: STAEAQPLALTGQVANFGHFQPC*KGQQRP
Trigger: AGGCCTCTGTTGCCCTTTTCAGCAAGGCTGGAAATG...TCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCTGAGCCTCAGCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp CTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCTTCTTGCAGTTGTGCTaGGCTGGAGGGCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LALTGQVANFGKARPQRIFLQLC*AGGPSP
Trigger: TGGGCTTGGCCCTCCAGCTCAGCACAACTGCAAGAA...GATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR GCA 90 bp GCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGAAGCGTAGCGGGCCGTaGCGGTCAGGTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: ASCAHWSSGKFWKSQTSEKRSGP*RSGSCF
Trigger: AAAACAAGAACCTGACCGGCACGGCCCGCTACGCTT...CTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR GCA 90 bp GAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACTGGCGCTTGGTGGCTaGTTTGAGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ENIKGQQSHTSIHPSSYGLALGG*FEPLPG
Trigger: CCCTGGCAGGGGCTCAAAGCAGCCACCAAGCGCCAG...TCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp GAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGATCCATGGCTCACTCTTaGCCGCCGGGAAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: ENIKGQQSHTSIHPSSYGSMAHS*PPGRRR
Trigger: TCGGCGCCTTCCCGGCGGGCAAGAGTGAGCCATGGA...TCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp TGTTTAATGAGTTCTGGTTCAACACAGAGGCCGCCAACGGGGTCTAGCTATGAGGGGAAACAGAACAACTaGCTAGCCAGACCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CLMSSGSTQRPPTGSSYEGKQNN*LARPRG
Trigger: GCCCCTGGGTCTGGCTAGGCAGTTGTTCTGTTTCCC...CTCATAGCTAGACCCCGTTGGCGGCCTCTGTGTTGAACCAGAACTCATTAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATTTGATTCTCCTCCCGTaGAAAAACGAAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHLILLP*KNEGQR
Trigger: TCTTTGCCCTTCGTTTTTCCACGGGAGGAGAATCAA...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359867.7
CDS-3UTR CCA 90 bp CTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCATGCGGCTGATCATCTaGTCGGCCAAGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: LALTGQVANFGKARPQRIMRLII*SAKSST
Trigger: GGTGCTGCTCTTGGCCGACCAGATGATCAGCCGCAT...GATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR CCA 90 bp TGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTATGAAGTTCTTGGAGTaGATATACTCGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: WKSPAREVSHCHLRVGGAMKFLE*IYSMRL
Trigger: CAGCCGCATCGAGTATATCCACTCCAAGAACTTCAT...AGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CAGGTCAATACATCCACACACACACACACACACACACACGCAGGGGACGCCGGCATGAAGTTCTTGGAGTaGATATACTCGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QVNTSTHTHTHTHAGDAGMKFLE*IYSMRL
Trigger: CAGCCGCATCGAGTATATCCACTCCAAGAACTTCAT...GCCGGCGTCCCCTGCGTGTGTGTGTGTGTGTGTGTGTGTGGATGTATTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp GCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGATGAGCCACCAGGCCTaGCCGACATTTCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ASCAHWSSGKFWKSQTSEMSHQA*PTFPVL
Trigger: CAAGACTGGAAATGTCGGCCAGGCCTGGTGGCTCAT...CTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTTGCTCCTGGCCTGGTTaGAAAAGAGATCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QQSHTSIHPSSYGPLSLACSWPG*KRDLAG
Trigger: GCCAGCAAGATCTCTTTTCCAACCAGGCCAGGAGCA...AGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CCA 90 bp AAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTCAAAGGATAAGGCTGTaGGTGCCTCTGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KVSKVTRASTRHHMDLCPQRIRL*VPLPSF
Trigger: GAAGCTGGGCAGAGGCACCCACAGCCTTATCCTTTG...AGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp CTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCTACTGTTGGGTAGCATaGGAAGGGCCTGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LALTGQVANFGKARPQRIYCWVA*EGPGLR
Trigger: CCTGAGGCCAGGCCCTTCCCATGCTACCCAACAGTA...GATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp GCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGTGACCTCGGAACACAGTaGCTGTATGTGCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: AKSHEHPPVIIWTSVLGCDLGTQ*LYVLRV
Trigger: CACTCTCAGCACATACAGCCACTGTGTTCCGAGGTC...ACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp GTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGGACCTCGGAACACAGTaGCTGTATGTGCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: VSKVTRASTRHHMDLCPWDLGTQ*LYVLRV
Trigger: CACTCTCAGCACATACAGCCACTGTGTTCCGAGGTC...CCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp CAATTTCACAGATTCCAGAGCTCTGGGTACGGCCGGCCAATGCTGCTCCCCACCCGCTCACTGGTCAAGTaGCAAATTTTGGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QFHRFQSSGYGRPMLLPTRSLVK*QILEKP
Trigger: TGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCG...GGTGGGGAGCAGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTGTGAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGACAGATTCCAGAGCTCTaGGTACGGCCGGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRQIPEL*VRPANA
Trigger: AGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTG...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGACCCAATGCCCTGTGGTaGAAAGAGCTGGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLRSLVKWQILEKPDLRGPNALW*KELVPG
Trigger: ACCTGGGACCAGCTCTTTCCACCACAGGGCATTGGG...TCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCGGGAGCGGCAGAAGTTaGGGTATGTTGAGAATTCGG +
Preference number: 4 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSGSGRS*GMLRIR
Trigger: CCGAATTCTCAACATACCTCAACTTCTGCCGCTCCC...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR TCA 90 bp CCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGGGGAGCGGCAGAAGTTaGGGTATGTTGAGAATTCGG +
Preference number: 4 (lower is better)
Translates to: PLALTGQVANFGKARPQRGSGRS*GMLRIR
Trigger: CCGAATTCTCAACATACCTCAACTTCTGCCGCTCCC...CCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR TCA 90 bp AGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCAACTCTCTTGTGTGGATaGATTTCTACAAAACAGACC +
Preference number: 4 (lower is better)
Translates to: SLVPGPEIRGRPALFMPPTLLCG*ISTKQT
Trigger: GGTCTGTTTTGTAGAAATTCATCCACACAAGAGAGT...TGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR TCA 90 bp TCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATTTACCAGTACGTGGGTaGGTACGTGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SCAHWSSGKFWKSQTSEDLPVRG*VRGPST
Trigger: TGTGCTGGGCCCACGTACTCACCCACGTACTGGTAA...ATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR GCA 90 bp CTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCTAAGCAAACACTGGTCCCCACCCCCAAATATCTaGCCAGCCCGCCATGGACAG +
Preference number: 4 (lower is better)
Translates to: LFMPPLSCVDEFLSKHWSPPPNI*PARHGQ
Trigger: CTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGG...GGACCAGTGTTTGCTTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366216.6
CDS-3UTR GCA 90 bp TTTCTACAAAACAGACCACACACAGATTGTCCCAGTGTAAAGTTGAGTCCCCCGCCACCCCCAAATATCTaGCCAGCCCGCCATGGACAG +
Preference number: 4 (lower is better)
Translates to: FLQNRPHTDCPSVKLSPPPPPNI*PARHGQ
Trigger: CTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGG...CGGGGGACTCAACTTTACACTGGGACAATCTGTGTGTGGTCTGTTTTGTAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR GCA 90 bp CAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGGTGTCCTGTCTACTGTTGTACAAAATCCATTCTTaGAGTTGTGCTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QIPAPRCSQQHRVSCLLLYKIHS*SCAELE
Trigger: CTCCAGCTCAGCACAACTGCAAGAATGGATTTTGTA...CAACAGTAGACAGGACACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCTAAGCAAACACTGGTCCCCCGCGAGATCGCTCTaGGAGAAGTATTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LFMPPLSCVDEFLSKHWSPARSL*EKYCQP
Trigger: CGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGG...GGACCAGTGTTTGCTTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366216.6
CDS-3UTR CCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCACTGTCATCTCAGAGTaGGTGGGGCTGTGCGTATCT +
Preference number: 4 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSTVISE*VGLCVS
Trigger: AGATACGCACAGCCCCACCCACTCTGAGATGACAGT...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp AACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTTCAGACCAGCAGCAGTaGGTGGAGAGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NIKGQQSHTSIHPSSYGPSDQQQ*VERCSW
Trigger: CCAGGAGCACCTCTCCACCCACTGCTGCTGGTCTGA...AGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp CAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCCTTACCAGTACGTGGTCAGAAATGGGGCCCTaGAGTCCAGACCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: QVANFGKARPQRILTSTWSEMGP*SPDHRP
Trigger: TGGCCTGTGGTCTGGACTCCAGGGCCCCATTTCTGA...CCACGTACTGGTAAGGATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCATCCTTACCAGTACGTaGGTGAGTACGTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LALTGQVANFGKARPQRIILTST*VSTWAQ
Trigger: CTGGGCCCACGTACTCACCCACGTACTGGTAAGGAT...GATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR TCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGACCTCGATGGGCGTTaGCATCTTCTTCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRDLDGR*HLLLAD
Trigger: ATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTC...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR TCA 90 bp CAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGAAGTTGAGGTATGTTaGGAATTCGGAGGGATAGCC +
Preference number: 4 (lower is better)
Translates to: QQSHTSIHPSSYGPLSLAEVEVC*EFGGIA
Trigger: GGCTATCCCTCCGAATTCTCAACATACCTCAACTTC...AGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp AGAGAAGAGAAGCCCAAGACCAATGTGCCGACCTTGGCTTCCAGGAGAACAGAGGAAGTTGAGGTATGTTaGGAATTCGGAGGGATAGCC +
Preference number: 4 (lower is better)
Translates to: REEKPKTNVPTLASRRTEEVEVC*EFGGIA
Trigger: GGCTATCCCTCCGAATTCTCAACATACCTCAACTTC...CTCTGTTCTCCTGGAAGCCAAGGTCGGCACATTGGTCTTGGGCTTCTCTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp AACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTGGCCTGGCCTCAGGGTaGAGGTTCCCATTGCATGTT +
Preference number: 4 (lower is better)
Translates to: NIKGQQSHTSIHPSSYGPGLASG*RFPLHV
Trigger: AACATGCAATGGGAACCTTCACCCTGAGGCCAGGCC...AGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp CATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTTGTCCTTGGCTGTGTTaGATTCCTTCCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HKRSAKSHEHPPVIIWTSCPWLC*IPSRPA
Trigger: AGCTGGCCGGGAAGGAATTCAACACAGCCAAGGACA...AGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp GCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTGCAGTTAGAGCTGGTCCCAGGTaGTCAAGGCCATGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ATILDSVRLENTKSILAVRAGPR*SRPWAP
Trigger: TGGGGCCCATGGCCTTGAGCACCTGGGACCAGCTCT...AACTGCAAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCATCCGTTCATACTTCTaGCGCTTGGTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSIRSYF*RLVAAL
Trigger: CAAAGCAGCCACCAAGCGCCAGAAGTATGAACGGAT...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp CCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGTGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLALTGQVANFGKARPQRCRGPR*ALTSSS
Trigger: AGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCA...CCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR CCA 90 bp GGAAGCAGTCTCCATGGATTCTGCCCTAAAACCAGGAATGGAAGATGGAGCTGCGCTGTGCGTATCTCCTaGATTCTGAGGCTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: GSSLHGFCPKTRNGRWSCAVRIS*ILRLGK
Trigger: TTTTCCGAGCCTCAGAATCCAGGAGATACGCACAGC...GCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGGAGACTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CCA 90 bp AGAGAAGAGAAGCCCAAGACCAATGTGCCGACCTTGGCTTCCAGGAGAACAGAGGTGTTTAATGAGTTCTaGTTCAACACAGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: REEKPKTNVPTLASRRTEVFNEF*FNTEAA
Trigger: GGCGGCCTCTGTGTTGAACCAGAACTCATTAAACAC...CTCTGTTCTCCTGGAAGCCAAGGTCGGCACATTGGTCTTGGGCTTCTCTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGGCCTCTTGCGCTCACTaGTCAAGTGGCAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: PLALTGQVANFGKARPQRASCAH*SSGKFW
Trigger: CCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGC...CCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR TCA 90 bp GAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGAGGCCTGGCCTCAGGGTaGAGGTTCCCATTGCATGTT +
Preference number: 4 (lower is better)
Translates to: ENIKGQQSHTSIHPSSYGGLASG*RFPLHV
Trigger: AACATGCAATGGGAACCTTCACCCTGAGGCCAGGCC...TCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR GCA 90 bp GTGGATGAATTTCTACAAAACAGACCACACACAGATTGTCCCAGTGTAAAGTTGGCGGGCGCACCCCTGTaGAGCCTCATACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: VDEFLQNRPHTDCPSVKLAGAPL*SLILTF
Trigger: GAAGGTGAGTATGAGGCTGCACAGGGGTGCGCCCGC...CAACTTTACACTGGGACAATCTGTGTGTGGTCTGTTTTGTAGAAATTCATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR GCA 90 bp GGAAGCAGTCTCCATGGATTCTGCCCTAAAACCAGGAATGGAAGATGGAGCTGCAAACTCGGTGGGAACTaGCTTCAACTGACTACACCA +
Preference number: 4 (lower is better)
Translates to: GSSLHGFCPKTRNGRWSCKLGGN*LQLTTP
Trigger: TGGTGTAGTCAGTTGAAGGCAGTTCCCACCGAGTTT...GCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGGAGACTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR GCA 90 bp GAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGAGGAAATGGTCCCATCTaGCTTGCCGGATGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ENIKGQQSHTSIHPSSYGGNGPI*LAGCGG
Trigger: GCCACCACATCCGGCAAGGCAGATGGGACCATTTCC...TCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR GCA 90 bp CCAATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTATCCCAGCACCCCGGTaGAGCCAACAACACAGGGTG +
Preference number: 4 (lower is better)
Translates to: PMATILDSVRLENTKSILIPAPR*SQQHRV
Trigger: CACCCTGTGTTGTTGGCTGCACCGGGGTGCTGGGAT...AAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp CTAGGAGATCCATCTTCATGTGACAGAAACGGATTCTCTCCCTTCTCTGCCCTCCCTCACTTCCCGAGATaGTCAAATGGCACACTTGTC +
Preference number: 4 (lower is better)
Translates to: LGDPSSCDRNGFSPFSALPHFPR*SNGTLV
Trigger: GACAAGTGTGCCATTTGACCATCTCGGGAAGTGAGG...GAGGGCAGAGAAGGGAGAGAATCCGTTTCTGTCACATGAAGATGGATCTCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CCA 90 bp CATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTCACCAGAGGCGATGTTaGCACCCAGGTAGATATCTC +
Preference number: 4 (lower is better)
Translates to: HKRSAKSHEHPPVIIWTSHQRRC*HPGRYL
Trigger: GAGATATCTACCTGGGTGCCAACATCGCCTCTGGTG...AGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp GAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGAATGCGGCTGATCATCTaGTCGGCCAAGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: ENIKGQQSHTSIHPSSYGMRLII*SAKSST
Trigger: GGTGCTGCTCTTGGCCGACCAGATGATCAGCCGCAT...TCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp AGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGTCCACAGAACGTTCTaGATGAAGGAAATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RSAKSHEHPPVIIWTSVLVHRTF*MKEMVP
Trigger: TGGGACCATTTCCTTCATCCAGAACGTTCTGTGGAC...AAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CCA 90 bp AACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCAAAGGATAAGGCTGTaGGTGCCTCTGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NIKGQQSHTSIHPSSYGPQRIRL*VPLPSF
Trigger: GAAGCTGGGCAGAGGCACCCACAGCCTTATCCTTTG...AGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp CATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTTGTCCTGTCTACTGTTaGGTAGCATGGGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HKRSAKSHEHPPVIIWTSCPVYC*VAWEGP
Trigger: AGGCCCTTCCCATGCTACCCAACAGTAGACAGGACA...AGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGCCTCTTGCGCTCACTaGTCAAGTGGCAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRASCAH*SSGKFW
Trigger: CCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGC...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR TCA 90 bp AACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTGACCTCGATGGGCGTTaGCATCTTCTTCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: NIKGQQSHTSIHPSSYGPDLDGR*HLLLAD
Trigger: ATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTC...AGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp CTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGAGAAGTTGAGGTATGTTaGGAATTCGGAGGGATAGCC +
Preference number: 4 (lower is better)
Translates to: LLRSLVKWQILEKPDLRGEVEVC*EFGGIA
Trigger: GGCTATCCCTCCGAATTCTCAACATACCTCAACTTC...TCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR GCA 90 bp ATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTGCATGGCCTCCACTGTGCTaGCATCTCTTGGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: MATILDSVRLENTKSILAWPPLC*HLLGTG
Trigger: CCCTGTTCCCAAGAGATGGCAGCACAGTGGAGGCCA...TGCAAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp TCTTGTGTGGATGAATTTCTACAAAACAGACCACACACAGATTGTCCCAGTGTACCCGCGAGATCGCTCTaGGAGAAGTATTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SCVDEFLQNRPHTDCPSVPARSL*EKYCQP
Trigger: CGGCTGGCAATACTTCTCCCAGAGCGATCTCGCGGG...TACACTGGGACAATCTGTGTGTGGTCTGTTTTGTAGAAATTCATCCACACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR CCA 90 bp GTGGATGAATTTCTACAAAACAGACCACACACAGATTGTCCCAGTGTAAAGTTGCCGCCATGGACAGCTTaGTTCCTGGGCCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: VDEFLQNRPHTDCPSVKLPPWTA*FLGLRS
Trigger: GGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGG...CAACTTTACACTGGGACAATCTGTGTGTGGTCTGTTTTGTAGAAATTCATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR CCA 90 bp TCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATATCCGTTCATACTTCTaGCGCTTGGTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SCAHWSSGKFWKSQTSEDIRSYF*RLVAAL
Trigger: CAAAGCAGCCACCAAGCGCCAGAAGTATGAACGGAT...ATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR CCA 90 bp GCCTGGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTTGTGAGACTCCATAAGATCCGTTCATACTTCTaGCGCTTGGTGGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: AWLEKRSCWLDSLVRLHKIRSYF*RLVAAL
Trigger: CAAAGCAGCCACCAAGCGCCAGAAGTATGAACGGAT...CTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp TTTCTACAAAACAGACCACACACAGATTGTCCCAGTGTAAAGTTGAGTCCCCCGTGCCTAAGCAAACACTaGTCCAATGGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FLQNRPHTDCPSVKLSPPCLSKH*SNGGSP
Trigger: AGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGGCA...CGGGGGACTCAACTTTACACTGGGACAATCTGTGTGTGGTCTGTTTTGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR CCA 90 bp GCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGCGCTCACTGGTCAAGTaGCAAATTTTGGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ASCAHWSSGKFWKSQTSERSLVK*QILEKP
Trigger: TGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCG...CTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR CCA 90 bp ATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTGCATGTGGTGGAAAGAGCTaGTCCCAGGTGCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: MATILDSVRLENTKSILACGGKS*SQVLKA
Trigger: GGCCTTGAGCACCTGGGACCAGCTCTTTCCACCACA...TGCAAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR TCA 90 bp CTAGGAGATCCATCTTCATGTGACAGAAACGGATTCTCTCCCTTCTCTGCCCTCAGATCCATCTTCATGTaGCAGAAACGGATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LGDPSSCDRNGFSPFSALRSIFM*QKRILS
Trigger: GGAGAGAATCCGTTTCTGTCACATGAAGATGGATCT...GAGGGCAGAGAAGGGAGAGAATCCGTTTCTGTCACATGAAGATGGATCTCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR TCA 90 bp GCCTGGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTTGTGAGACTCCATAAGACAGAACGTTCTGGATaGAGGAAATGGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: AWLEKRSCWLDSLVRLHKTERSG*RKWSHL
Trigger: CAGATGGGACCATTTCCTTCATCCAGAACGTTCTGT...CTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp CTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGAATGAAGTTCTTGGAGTaGATATACTCGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLRSLVKWQILEKPDLRGMKFLE*IYSMRL
Trigger: CAGCCGCATCGAGTATATCCACTCCAAGAACTTCAT...TCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR CCA 90 bp GCCAATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTAGCCTCCCAAGCAGCTaGGATTACAGGAACACACCA +
Preference number: 4 (lower is better)
Translates to: ANGYHLGQCPSREYKIHSSLPSS*DYRNTP
Trigger: TGGTGTGTTCCTGTAATCCCAGCTGCTTGGGAGGCT...AGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp ATAGAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGGGACTGCTGGAGGTaGTTCAGCTCACTACAGTGG +
Preference number: 4 (lower is better)
Translates to: IENIKGQQSHTSIHPSSYGDCWR*FSSLQW
Trigger: CCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCC...ATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CCA 90 bp ATAGAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATCTGCCAGGGGACTGCTaGAGGTGGTTCAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: IENIKGQQSHTSIHPSSYLPGDC*RWFSSL
Trigger: TAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAG...ATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR TCA 90 bp CCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCTAAGCAAACACAGATCCATCTTCATGTaGCAGAAACGGATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PALFMPPLSCVDEFLSKHRSIFM*QKRILS
Trigger: GGAGAGAATCCGTTTCTGTCACATGAAGATGGATCT...GTGTTTGCTTAGAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366216.6
CDS-3UTR CCA 90 bp GCCTGGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTTGTGAGACTCCATAAGATGAAGTTCTTGGAGTaGATATACTCGATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AWLEKRSCWLDSLVRLHKMKFLE*IYSMRL
Trigger: CAGCCGCATCGAGTATATCCACTCCAAGAACTTCAT...CTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CCA 90 bp GCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTGCAGTTGACCTCGGAACACAGTaGCTGTATGTGCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ATILDSVRLENTKSILAVDLGTQ*LYVLRV
Trigger: CACTCTCAGCACATACAGCCACTGTGTTCCGAGGTC...AACTGCAAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp TTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCCTCAAGTGGCAAATTTTaGAAAAGCCAGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LRSLVKWQILEKPDLRGSSSGKF*KSQTSE
Trigger: CTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGA...GGATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR GCA 90 bp GTGGATGAATTTCTACAAAACAGACCACACACAGATTGTCCCAGTGTAAAGTTGATTCTCTCCCTTCTCTaGCCTCCTGGTGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: VDEFLQNRPHTDCPSVKLILSLL*PPGEHL
Trigger: GAGATGCTCACCAGGAGGGCAGAGAAGGGAGAGAAT...CAACTTTACACTGGGACAATCTGTGTGTGGTCTGTTTTGTAGAAATTCATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR GCA 90 bp GCCAATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTGGTGAAGGTTCCCATTaGATGTTTTCCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: ANGYHLGQCPSREYKIHSGEGSH*MFSRCF
Trigger: GAAGCACCTGGAAAACATGCAATGGGAACCTTCACC...AGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp ATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTGCATGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: MATILDSVRLENTKSILACRGPR*ALTSSS
Trigger: AGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCA...TGCAAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CCA 90 bp ATAGAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATTGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IENIKGQQSHTSIHPSSYCRGPR*ALTSSS
Trigger: AGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCA...ATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
3UTR CAA 72 bp TTAAAAATGTGTCGCATGTGGCCAATGGCTACCATCTaGGACAGTGTCCGTCTAGAGAATACAAAATCCATT +
Preference number: 4 (lower is better)
Translates to: LKMCRMWPMATI*DSVRLENTKSI
Trigger: AATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCATTGGCCACATGCGACACATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS CCA 90 bp GTTCCGACGGGAGACAGCGCCCTGCCTGGGCCCTGCTGCCCATGGTaGCACAAGCTGTCAGCACGGATGAGGCTGGAGGGCTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: VPTGDSALPGPCCPW*HKLSARMRLEGSGT
Trigger: GGTCCCAGAGCCCTCCAGCCTCATCCGTGCTGACAGCTTGTGCCACCATGGGCAGCAGGGCCCAGGCAGGGCGCTGTCTCCCGTCGGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS TCA 90 bp AGCTCACCTGTGAGGCTGGGATCCGGGAGACCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACGTTGGCGGGCGCACCCCTGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSPVRLGSGRPLAAQ*GLRRRRWRAHPCAA
Trigger: GGCTGCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGATCCCAGCCTCACAGGTGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494610.1
CDS-3UTR CAA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACTCAGCTCCGCACCACTaGATGGACGGGATCCCCACG +
Preference number: 5 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNSAPHH*MDGIPT
Trigger: CGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTGA...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS GCA 90 bp ATCCTCCTTGTTCCGACGGGAGACAGCGCCCTGCCTGGGCCCTGCTaGCCATGGTGGCACAAGCTGTCAGCACGGATGAGGCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: ILLVPTGDSALPGPC*PWWHKLSARMRLEG
Trigger: GCCCTCCAGCCTCATCCGTGCTGACAGCTTGTGCCACCATGGGCAGCAGGGCCCAGGCAGGGCGCTGTCTCCCGTCGGAACAAGGAGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp GTAGCTGCCCCATCCTCTCCTCGCGTTCGTGTTCTCGCCGCTCCCGGTCCACATTCTGAGGAGGAGACGTaGGCGGGCGCACCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: VAAPSSPRVRVLAAPGPHSEEET*AGAPLC
Trigger: GCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGA...ATGTGGACCGGGAGCGGCGAGAACACGAACGCGAGGAGAGGATGGGGCAGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS GCA 90 bp CAGATCCTCCTTGTTCCGACGGGAGACAGCGCCCTGCCTGGGCCCTaGTGCCCATGGTGGCACAAGCTGTCAGCACGGATGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QILLVPTGDSALPGP*CPWWHKLSARMRLE
Trigger: CTCCAGCCTCATCCGTGCTGACAGCTTGTGCCACCATGGGCAGCAGGGCCCAGGCAGGGCGCTGTCTCCCGTCGGAACAAGGAGGATCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS GCA 90 bp CCAGGTGAAGCCAGATCCTCCTTGTTCCGACGGGAGACAGCGCCCTaGCTGGGCCCTGCTGCCCATGGTGGCACAAGCTGTCAGCACGGA +
Preference number: 5 (lower is better)
Translates to: PGEARSSLFRRETAP*LGPAAHGGTSCQHG
Trigger: TCCGTGCTGACAGCTTGTGCCACCATGGGCAGCAGGGCCCAGGCAGGGCGCTGTCTCCCGTCGGAACAAGGAGGATCTGGCTTCACCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp GGGAATTCGGGCTGGCAGGCGGGGCGGGCCGTGGCACCTGCTGTCTTGGGAAACGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGCGT +
Preference number: 5 (lower is better)
Translates to: GNSGWQAGRAVAPAVLGNVISTA*LNAQVR
Trigger: ACGCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...GTTTCCCAAGACAGCAGGTGCCACGGCCCGCCCCGCCTGCCAGCCCGAATTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp CCACCAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCTCATACTTCTGGCGCTaGGTGGCTGCTTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: PPGPLWAVATIPPSGCPGSYFWR*VAALSP
Trigger: GGGGCTCAAAGCAGCCACCAAGCGCCAGAAGTATGA...GCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS CCA 90 bp CCAGACCCAGGGGCCCATGACCAAGAAGAAAGCAAGCACCATGACTaGGTCCAGGCTGGCCCGAGGGGCCATGGTGCAGGTAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: PDPGAHDQEESKHHD*VQAGPRGHGAGSHL
Trigger: CAGGTGGCTACCTGCACCATGGCCCCTCGGGCCAGCCTGGACCCAGTCATGGTGCTTGCTTTCTTCTTGGTCATGGGCCCCTGGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp CACCCCACCCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCCCGCCATGGACAGCTaGGTTCCTGGGCCTGAGATC +
Preference number: 5 (lower is better)
Translates to: HPTPKYLPSPPWTAWFLGPAMDS*VPGPEI
Trigger: GATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGG...GCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGGGTGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CAA 90 bp CAGGTCAATACATCCACACACACACACACACACACACACGCAGGGGACGCCGGCTCTGAGGAGGAGACGTaGGCGGGCGCACCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: QVNTSTHTHTHTHAGDAGSEEET*AGAPLC
Trigger: GCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGA...GCCGGCGTCCCCTGCGTGTGTGTGTGTGTGTGTGTGTGTGGATGTATTGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp TGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTTCTGAGGAGGAGACGTaGGCGGGCGCACCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: WKSPAREVSHCHLRVGGASEEET*AGAPLC
Trigger: GCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGA...AGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp CCCGTAGCTGCCCCATCCTCTCCTCGCGTTCGTGTTCTCGCCGCTCCCGGTCCAGGTCAAATGGCACACTaGTCTGTGAGGCTGGGATCC +
Preference number: 5 (lower is better)
Translates to: PVAAPSSPRVRVLAAPGPGQMAH*SVRLGS
Trigger: GGATCCCAGCCTCACAGACAAGTGTGCCATTTGACC...TGGACCGGGAGCGGCGAGAACACGAACGCGAGGAGAGGATGGGGCAGCTACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CAA 90 bp TTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACACGTCCCAGGCGGTACTaGTTCCCCACACGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: FQAPGIHRSQHPGAANNTRPRRY*FPTRSS
Trigger: GGAGCTACGTGTGGGGAACAAGTACCGCCTGGGACG...TGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CAA 90 bp GCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCCTCTCTCAGCTCCGCACCACTaGATGGACGGGATCCCCACG +
Preference number: 5 (lower is better)
Translates to: ALALGPVTSPTRTRPVPLSAPHH*MDGIPT
Trigger: CGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTGA...GAGAGGAACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp GGTGCTTCTGCCAGGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGTCAGCTCCGCACCACTaGATGGACGGGATCCCCACG +
Preference number: 5 (lower is better)
Translates to: GASARGLLEVVQLTTVAVSAPHH*MDGIPT
Trigger: CGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTGA...CACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CAA 90 bp CTCCCGGTCCACATCCTCGGGATTCCGGGCTGCACCCTAGTTCATCCTGGGGCCGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGCGT +
Preference number: 5 (lower is better)
Translates to: LPVHILGIPGCTLVHPGAVISTA*LNAQVR
Trigger: ACGCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...GGCCCCAGGATGAACTAGGGTGCAGCCCGGAATCCCGAGGATGTGGACCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CAA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTTCATACTTCTGGCGCTaGGTGGCTGCTTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRSYFWR*VAALSP
Trigger: GGGGCTCAAAGCAGCCACCAAGCGCCAGAAGTATGA...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp GGGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTATGGTCCCATCTGCCTaGCCGGATGTGGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: GPASRGTSRKAVRPAAVGMVPSA*PDVVAT
Trigger: AGTGGCCACCACATCCGGCAAGGCAGATGGGACCAT...ACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CAA 90 bp ACAGATTCCAGAGCTCTGGGTACGGCCGGCCAATGCTGCTCCCCACCCAACCCCCTGAGGCTCAGCCTCTaGCGCTCACTGGTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: TDSRALGTAGQCCSPPNPLRLSL*RSLVKW
Trigger: CCACTTGACCAGTGAGCGCAAGAGGCTGAGCCTCAG...GGGGTTGGGTGGGGAGCAGCATTGGCCGGCCGTACCCAGAGCTCTGGAATCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS CCA 90 bp CTGCCACCCACCCCTCCACAACACATTGGTCTCTTTCTGGGGCCCTaGGAGCTTCTAGGTCGGCTGGGCTGGCTGCATCTGCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LPPTPPQHIGLFLGP*ELLGRLGWLHLQQS
Trigger: TGACTGCTGCAGATGCAGCCAGCCCAGCCGACCTAGAAGCTCCCAGGGCCCCAGAAAGAGACCAATGTGTTGTGGAGGGGTGGGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS-3UTR CAA 90 bp CCTGAGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATTCTGAGGAGGAGACGTaGGCGGGCGCACCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: PEIRGRPALFMPPLSCVDSEEET*AGAPLC
Trigger: GCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGA...ATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CAA 90 bp AGGGCCGGCTTTGGCTCTGGGACCTGTCACTTCTCCGACACGGACCCGACCCGTGGTCAAATGGCACACTaGTCTGTGAGGCTGGGATCC +
Preference number: 5 (lower is better)
Translates to: RAGFGSGTCHFSDTDPTRGQMAH*SVRLGS
Trigger: GGATCCCAGCCTCACAGACAAGTGTGCCATTTGACC...ACGGGTCGGGTCCGTGTCGGAGAAGTGACAGGTCCCAGAGCCAAAGCCGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp GCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCCGAGGAAGGCCAGGTCAAATGGCACACTaGTCTGTGAGGCTGGGATCC +
Preference number: 5 (lower is better)
Translates to: AQPAMDSLVPGPEIRGRPGQMAH*SVRLGS
Trigger: GGATCCCAGCCTCACAGACAAGTGTGCCATTTGACC...TGGCCTTCCTCGGATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CAA 90 bp ACCCCTGTGCAGCCTCATACTCACCTTCCTCTCCCGGTCGACCCGCGAGATCGCTCATACTTCTGGCGCTaGGTGGCTGCTTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: TPVQPHTHLPLPVDPRDRSYFWR*VAALSP
Trigger: GGGGCTCAAAGCAGCCACCAAGCGCCAGAAGTATGA...GCGATCTCGCGGGTCGACCGGGAGAGGAAGGTGAGTATGAGGCTGCACAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431611.5
CDS-3UTR CAA 90 bp TGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCAAGGACCCCATGGCAGGGACAGTGGCCGTGGCATaGAGTCAGAGATTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: WPPSLPQAVLALKDPMAGTVAVA*SQRLAK
Trigger: CTTTGCCAATCTCTGACTCAATGCCACGGCCACTGT...CCCTGCCATGGGGTCCTTGAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp CAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCATTCTCTGCCTCTGTGCTGCCATCTCTaGGGAACAGGGGGTCATCCC +
Preference number: 5 (lower is better)
Translates to: QQRPLPEVPSLRDPHSLPLCCHL*GTGGHP
Trigger: GGGATGACCCCCTGTTCCCAAGAGATGGCAGCACAG...AGGCAGAGAATGGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp CCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGACCAATGTGCCGACCTaGGCTTCCAGGAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: PGPRDPQIPAPRCSQQHRTNVPT*ASRRTE
Trigger: CTCTGTTCTCCTGGAAGCCAAGGTCGGCACATTGGT...CCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp CAGGCCCCTTGTGGGCAGTGGCCACCATCCCTCCCTCAGGCTGTCCTGGCCCTCATCCCATTTCCAGCCTaGCTGAAAAGGGCAACAGAG +
Preference number: 5 (lower is better)
Translates to: QAPCGQWPPSLPQAVLALIPFPA*LKRATE
Trigger: CTCTGTTGCCCTTTTCAGCAAGGCTGGAAATGGGAT...GAGGGCCAGGACAGCCTGAGGGAGGGATGGTGGCCACTGCCCACAAGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp TGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTCGTCCCAGGCGGTACTaGTTCCCCACACGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: WKSPAREVSHCHLRVGGARPRRY*FPTRSS
Trigger: GGAGCTACGTGTGGGGAACAAGTACCGCCTGGGACG...AGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp CCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACACAGGAAGAGCAGCACCGTCTaGAGGCTGAATTTGCGGGAA +
Preference number: 5 (lower is better)
Translates to: PGPRDPQIPAPRCSQQHRKSSTV*RLNLRE
Trigger: TTCCCGCAAATTCAGCCTCAAGACGGTGCTGCTCTT...CCTGTGTTGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CAA 90 bp CCCGGCCAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGCGT +
Preference number: 5 (lower is better)
Translates to: PGQLTGPRNTVAVCAESGVISTA*LNAQVR
Trigger: ACGCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...GCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTGGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CAA 90 bp GTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACAACAGTGGCCGTGGCATaGAGTCAGAGATTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VASRPQGSTDPSTPVQPTTVAVA*SQRLAK
Trigger: CTTTGCCAATCTCTGACTCAATGCCACGGCCACTGT...TGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CAA 90 bp ACAGGGGGTCATCCCATCCTCCCAAGAAACACTTCCTCAGGCCTGGCCCCGATGCTGTGCTGCCATCTCTaGGGAACAGGGGGTCATCCC +
Preference number: 5 (lower is better)
Translates to: TGGHPILPRNTSSGLAPMLCCHL*GTGGHP
Trigger: GGGATGACCCCCTGTTCCCAAGAGATGGCAGCACAG...CATCGGGGCCAGGCCTGAGGAAGTGTTTCTTGGGAGGATGGGATGACCCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000442216.1
ENST00000612795.2
CDS-3UTR CAA 90 bp GGCAGCCTGAAGGTTGGGGGCAGCGGGCACCACAAGGGGGCAAGAATCCTCAGTCTCCATGGCTCACTCTaGATTCTCCTCCCGTGGAAA +
Preference number: 5 (lower is better)
Translates to: GSLKVGGSGHHKGARILSLHGSL*ILLPWK
Trigger: TTTCCACGGGAGGAGAATCAAGAGTGAGCCATGGAG...ACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCTGCCCCCAACCTTCAGGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359867.7
CDS-3UTR CAA 90 bp CTGGTTCAACACAGAGGCCGCCAACGGGGTCTAGCTATGAGTCTGTCCTGGGACGAAGCCAGATCCTCCTaGTTCCGACGGGAGACAGCG +
Preference number: 5 (lower is better)
Translates to: LVQHRGRQRGLAMSLSWDEARSS*FRRETA
Trigger: CGCTGTCTCCCGTCGGAACAAGGAGGATCTGGCTTC...GTCCCAGGACAGACTCATAGCTAGACCCCGTTGGCGGCCTCTGTGTTGAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp GGCCTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTGGGTGCCAATGGCTACCATCTaGGACAGTGTCCGTCTAGAG +
Preference number: 5 (lower is better)
Translates to: GLPQEGLPGRRSDQQQWVPMATI*DSVRLE
Trigger: CTCTAGACGGACACTGTCCAAGATGGTAGCCATTGG...CACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS CCA 90 bp TGGGAGCTTCTAGGTCGGCTGGGCTGGCTGCATCTGCAGCAGTCATaGACTCACCTAAGCAAACACTGGTCCAATGGGGGCTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: WELLGRLGWLHLQQS*THLSKHWSNGGSPH
Trigger: GTGAGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGGTGAGTCCATGACTGCTGCAGATGCAGCCAGCCCAGCCGACCTAGAAGCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS-3UTR CAA 90 bp CCCCAAATATCTGCCCAGCCCGCCATGGACAGCTTGGTTCCTGGGCCTGAGATCGGTCAAATGGCACACTaGTCTGTGAGGCTGGGATCC +
Preference number: 5 (lower is better)
Translates to: PQISAQPAMDSLVPGPEIGQMAH*SVRLGS
Trigger: GGATCCCAGCCTCACAGACAAGTGTGCCATTTGACC...GATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGGCTGGGCAGATATTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CAA 90 bp CAACAGAGGCCTCTCCCTGAGGTCCCTAGCCTGCGAGACCCCCATTCTCTGCCTAAGAGCAGCACCGTCTaGAGGCTGAATTTGCGGGAA +
Preference number: 5 (lower is better)
Translates to: QQRPLPEVPSLRDPHSLPKSSTV*RLNLRE
Trigger: TTCCCGCAAATTCAGCCTCAAGACGGTGCTGCTCTT...AGGCAGAGAATGGGGGTCTCGCAGGCTAGGGACCTCAGGGAGAGGCCTCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp GGGCCTGGCCTCAGGGTGAAGGTTCCCATTGCATGTTTTCCAGGTGCTTCTGCCGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGCGT +
Preference number: 5 (lower is better)
Translates to: GPGLRVKVPIACFPGASAVISTA*LNAQVR
Trigger: ACGCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...GGCAGAAGCACCTGGAAAACATGCAATGGGAACCTTCACCCTGAGGCCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CAA 90 bp CAGGTCAATACATCCACACACACACACACACACACACACGCAGGGGACGCCGGCTCCTGTAGCCTGGTGTaGTCAGGGGAGCATCTGGCA +
Preference number: 5 (lower is better)
Translates to: QVNTSTHTHTHTHAGDAGSCSLV*SGEHLA
Trigger: TGCCAGATGCTCCCCTGACAACACCAGGCTACAGGA...GCCGGCGTCCCCTGCGTGTGTGTGTGTGTGTGTGTGTGTGGATGTATTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp GTGGCTTCCAGGCCCCAGGGATCCACAGATCCCAGCACCCCGGTGCAGCCAACATATGGACCTCTGTCCTaGGCTGTGTTGAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: VASRPQGSTDPSTPVQPTYGPLS*AVLNSF
Trigger: GAAGGAATTCAACACAGCCAAGGACAGAGGTCCATA...TGTTGGCTGCACCGGGGTGCTGGGATCTGTGGATCCCTGGGGCCTGGAAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS CCA 90 bp CTGCCTCAAGAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTaGGTGGAGAGGTGCTCCTGGCGAATTTCAGCATGTTCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: LPQEGLPGRRSDQQQ*VERCSWRISACSSQ
Trigger: TTGACTGGAACATGCTGAAATTCGCCAGGAGCACCTCTCCACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTCTTGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413574.6
CDS CCA 90 bp ATTGGTCTCTTTCTGGGGCCCTGGGAGCTTCTAGGTCGGCTGGGCTaGCTGCATCTGCAGCAGTCATGGACTCACCTAAGCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: IGLFLGPWELLGRLG*LHLQQSWTHLSKHW
Trigger: CCAGTGTTTGCTTAGGTGAGTCCATGACTGCTGCAGATGCAGCCAGCCCAGCCGACCTAGAAGCTCCCAGGGCCCCAGAAAGAGACCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS-3UTR CAA 90 bp TCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATTTCCCCGCCATGGACAGCTaGGTTCCTGGGCCTGAGATC +
Preference number: 5 (lower is better)
Translates to: SEEGQPCSCLHSLVWMNFPAMDS*VPGPEI
Trigger: GATCTCAGGCCCAGGAACCAAGCTGTCCATGGCGGG...GAAATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366216.6
ENST00000431632.5
CDS-3UTR CAA 90 bp CCCAGCACGGGAAGTCAGCCACTGTCATCTCAGAGTGGGTGGGGCTGTGCGTATAAGAGCAGCACCGTCTaGAGGCTGAATTTGCGGGAA +
Preference number: 5 (lower is better)
Translates to: PSTGSQPLSSQSGWGCAYKSSTV*RLNLRE
Trigger: TTCCCGCAAATTCAGCCTCAAGACGGTGCTGCTCTT...ATACGCACAGCCCCACCCACTCTGAGATGACAGTGGCTGACTTCCCGTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp CAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCCAGTCATACTTCTGGCGCTaGGTGGCTGCTTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: QLTGPRNTVAVCAESGFQSYFWR*VAALSP
Trigger: GGGGCTCAAAGCAGCCACCAAGCGCCAGAAGTATGA...CTGGAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS TCA 90 bp TCTCGATGTGCAGCTGGGGGTGCTTTGTCTTCACACACTCCAGCTTaGTGGCGACTTCCTCACCAGAGGCGATGTTGGCACCCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: SRCAAGGALSSHTPA*WRLPHQRRCWHPGR
Trigger: TCTACCTGGGTGCCAACATCGCCTCTGGTGAGGAAGTCGCCATCAAGCTGGAGTGTGTGAAGACAAAGCACCCCCAGCTGCACATCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359867.7
ENST00000396832.6
ENST00000403904.5
ENST00000405675.7
ENST00000413574.6
ENST00000430335.1
CDS CCA 90 bp GGCTGGCTGCATCTGCAGCAGTCATGGACTCACCTAAGCAAACACTaGTCCAATGGGGGCTCTCCTCACTTCCCGAGATGGTCAAATGGC +
Preference number: 5 (lower is better)
Translates to: GWLHLQQSWTHLSKH*SNGGSPHFPRWSNG
Trigger: GCCATTTGACCATCTCGGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGGTGAGTCCATGACTGCTGCAGATGCAGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS-3UTR CAA 90 bp GGAAGCAGTCTCCATGGATTCTGCCCTAAAACCAGGAATGGAAGATGGAGCTGCCGTCCCAGGCGGTACTaGTTCCCCACACGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: GSSLHGFCPKTRNGRWSCRPRRY*FPTRSS
Trigger: GGAGCTACGTGTGGGGAACAAGTACCGCCTGGGACG...GCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGGAGACTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp AGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTTCAGCTCCGCACCACTaGATGGACGGGATCCCCACG +
Preference number: 5 (lower is better)
Translates to: RSAKSHEHPPVIIWTSVLSAPHH*MDGIPT
Trigger: CGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTGA...AAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CAA 90 bp TGGAGGCCAGGGGGACAATGGAAAAGCCCAGCACGGGAAGTCAGCCACTGTCATAAGAGCAGCACCGTCTaGAGGCTGAATTTGCGGGAA +
Preference number: 5 (lower is better)
Translates to: WRPGGQWKSPAREVSHCHKSSTV*RLNLRE
Trigger: TTCCCGCAAATTCAGCCTCAAGACGGTGCTGCTCTT...ATGACAGTGGCTGACTTCCCGTGCTGGGCTTTTCCATTGTCCCCCTGGCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp GTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGATGGTCCCATCTGCCTaGCCGGATGTGGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: VSKVTRASTRHHMDLCPWMVPSA*PDVVAT
Trigger: AGTGGCCACCACATCCGGCAAGGCAGATGGGACCAT...CCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CAA 90 bp GGTGCTTCTGCCAGGGGACTGCTGGAGGTGGTTCAGCTCACTACAGTGGCCGTGGCATTGAGTCAGAGATaGGCAAAGGATAAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GASARGLLEVVQLTTVAVALSQR*AKDKAV
Trigger: CACAGCCTTATCCTTTGCCAATCTCTGACTCAATGC...CACGGCCACTGTAGTGAGCTGAACCACCTCCAGCAGTCCCCTGGCAGAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CAA 90 bp CAGCTGACTGGACCTCGGAACACAGTGGCTGTATGTGCTGAGAGTGGCTTCCAGAAGAGCAGCACCGTCTaGAGGCTGAATTTGCGGGAA +
Preference number: 5 (lower is better)
Translates to: QLTGPRNTVAVCAESGFQKSSTV*RLNLRE
Trigger: TTCCCGCAAATTCAGCCTCAAGACGGTGCTGCTCTT...CTGGAAGCCACTCTCAGCACATACAGCCACTGTGTTCCGAGGTCCAGTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405675.7
ENST00000413574.6
ENST00000612795.2
CDS-3UTR CAA 90 bp GCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGTTCATACTTCTGGCGCTaGGTGGCTGCTTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: AKSHEHPPVIIWTSVLGCSYFWR*VAALSP
Trigger: GGGGCTCAAAGCAGCCACCAAGCGCCAGAAGTATGA...ACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CAA 90 bp GTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGTCATACTTCTGGCGCTaGGTGGCTGCTTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: VSKVTRASTRHHMDLCPWSYFWR*VAALSP
Trigger: GGGGCTCAAAGCAGCCACCAAGCGCCAGAAGTATGA...CCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CAA 90 bp AGCGGGCACCACAAGGGGGCAAGAATCCTCAGTGCTGAGGGCATCTCATCTTCTCCCACCCCCATGTCCTaGTTAGTAGACACAGGAGAA +
Preference number: 5 (lower is better)
Translates to: SGHHKGARILSAEGISSSPTPMS*LVDTGE
Trigger: TTCTCCTGTGTCTACTAACAAGGACATGGGGGTGGG...AGAAGATGAGATGCCCTCAGCACTGAGGATTCTTGCCCCCTTGTGGTGCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp CTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCGGCCATGGGCCCCATTaGGAGCCAGAAGGTCTAGGG +
Preference number: 5 (lower is better)
Translates to: LALTGQVANFGKARPQRIGHGPH*EPEGLG
Trigger: CCCTAGACCTTCTGGCTCCAAATGGGGCCCATGGCC...GATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS CCA 90 bp CAAGAGGGCTCATCAGACCTCAGAGGATTAAATGAGGCCAAGTCCTaGCTCTACAGAAGGGGTTCACTCCAAGGCAAGCAGCGTCGATGG +
Preference number: 5 (lower is better)
Translates to: QEGSSDLRGLNEAKS*LYRRGSLQGKQRRW
Trigger: CCATCGACGCTGCTTGCCTTGGAGTGAACCCCTTCTGTAGAGCCAGGACTTGGCCTCATTTAATCCTCTGAGGTCTGATGAGCCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494610.1
CDS-3UTR CAA 90 bp ATTTCTACAAAACAGACCACACACAGATTGTCCCAGTGTAAAGTTGAGTCCCCCTCTGAGGAGGAGACGTaGGCGGGCGCACCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: ISTKQTTHRLSQCKVESPSEEET*AGAPLC
Trigger: GCACAGGGGTGCGCCCGCCAACGTCTCCTCCTCAGA...GGGGGACTCAACTTTACACTGGGACAATCTGTGTGTGGTCTGTTTTGTAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR CAA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGCGT +
Preference number: 5 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSVISTA*LNAQVR
Trigger: ACGCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp GGAAGCAGTCTCCATGGATTCTGCCCTAAAACCAGGAATGGAAGATGGAGCTGCTCATACTTCTGGCGCTaGGTGGCTGCTTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: GSSLHGFCPKTRNGRWSCSYFWR*VAALSP
Trigger: GGGGCTCAAAGCAGCCACCAAGCGCCAGAAGTATGA...GCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGGAGACTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS CCA 90 bp GCATCTGCAGCAGTCATGGACTCACCTAAGCAAACACTGGTCCAATaGGGGCTCTCCTCACTTCCCGAGATGGTCAAATGGCACACTTGT +
Preference number: 5 (lower is better)
Translates to: ASAAVMDSPKQTLVQ*GLSSLPEMVKWHTC
Trigger: ACAAGTGTGCCATTTGACCATCTCGGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGGTGAGTCCATGACTGCTGCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS-3UTR CAA 90 bp TTAACTAGGAAGGATGGGTTAATCCAAAACCCAGCCCTGACTCCAGGCTCCTCCGGTCAAATGGCACACTaGTCTGTGAGGCTGGGATCC +
Preference number: 5 (lower is better)
Translates to: LTRKDGLIQNPALTPGSSGQMAH*SVRLGS
Trigger: GGATCCCAGCCTCACAGACAAGTGTGCCATTTGACC...GGAGGAGCCTGGAGTCAGGGCTGGGTTTTGGATTAACCCATCCTTCCTAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp AGCCTCTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGCGT +
Preference number: 5 (lower is better)
Translates to: SLLRSLVKWQILEKPDLRVISTA*LNAQVR
Trigger: ACGCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...TCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR CAA 90 bp TTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCCTCATACTTCTGGCGCTaGGTGGCTGCTTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LRSLVKWQILEKPDLRGSSYFWR*VAALSP
Trigger: GGGGCTCAAAGCAGCCACCAAGCGCCAGAAGTATGA...GGATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR CAA 90 bp TCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGCTGTGTTGAAGTGCTCCTGGCCTGGTaGGAAAAGAGATCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: SHEHPPVIIWTSVLGCVEVLLAW*EKRSCW
Trigger: CCAGCAAGATCTCTTTTCCAACCAGGCCAGGAGCAC...TTCAACACAGCCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CAA 90 bp CCTGCCCATATCCCATTTCCAGCCTTGCTGAAAAGGGCAACAGAGGCCTCTCCCGCATTGAGTCAGAGATaGGCAAAGGATAAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PAHIPFPALLKRATEASPALSQR*AKDKAV
Trigger: CACAGCCTTATCCTTTGCCAATCTCTGACTCAATGC...GGGAGAGGCCTCTGTTGCCCTTTTCAGCAAGGCTGGAAATGGGATATGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp GCCTGGTTGGAAAAGAGATCTTGCTGGCTAGACAGTCTTGTGAGACTCCATAAGGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGCGT +
Preference number: 5 (lower is better)
Translates to: AWLEKRSCWLDSLVRLHKVISTA*LNAQVR
Trigger: ACGCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...CTTATGGAGTCTCACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAACCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000612795.2
CDS-3UTR CAA 90 bp GGAAGCAGTCTCCATGGATTCTGCCCTAAAACCAGGAATGGAAGATGGAGCTGCCCCACCCCCATGTCCTaGTTAGTAGACACAGGAGAA +
Preference number: 5 (lower is better)
Translates to: GSSLHGFCPKTRNGRWSCPTPMS*LVDTGE
Trigger: TTCTCCTGTGTCTACTAACAAGGACATGGGGGTGGG...GCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGGAGACTGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359867.7
ENST00000396832.6
CDS-3UTR CAA 90 bp AAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTACAGTGGCCGTGGCATaGAGTCAGAGATTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: KVSKVTRASTRHHMDLCPTVAVA*SQRLAK
Trigger: CTTTGCCAATCTCTGACTCAATGCCACGGCCACTGT...AGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CAA 90 bp CTTGCGCTCACTGGTCAAGTGGCAAATTTTGGAAAAGCCAGACCTCAGAGGATCAAGAGCAGCACCGTCTaGAGGCTGAATTTGCGGGAA +
Preference number: 5 (lower is better)
Translates to: LALTGQVANFGKARPQRIKSSTV*RLNLRE
Trigger: TTCCCGCAAATTCAGCCTCAAGACGGTGCTGCTCTT...GATCCTCTGAGGTCTGGCTTTTCCAAAATTTGCCACTTGACCAGTGAGCGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451964.5
ENST00000612795.2
CDS-3UTR CAA 90 bp GTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGTATGGACCTCTGTCCTaGGCTGTGTTGAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: VSKVTRASTRHHMDLCPWYGPLS*AVLNSF
Trigger: GAAGGAATTCAACACAGCCAAGGACAGAGGTCCATA...CCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CAA 90 bp AGATCCGAGGAAGGCCAGCCCTGTTCATGCCTCCACTCTCTTGTGTGGATGAATCAGACCACACACAGATaGTCCCAGTGTAAAGTTGAG +
Preference number: 5 (lower is better)
Translates to: RSEEGQPCSCLHSLVWMNQTTHR*SQCKVE
Trigger: CTCAACTTTACACTGGGACAATCTGTGTGTGGTCTG...ATTCATCCACACAAGAGAGTGGAGGCATGAACAGGGCTGGCCTTCCTCGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR CAA 90 bp ATAGAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATCGTCCCAGGCGGTACTaGTTCCCCACACGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: IENIKGQQSHTSIHPSSYRPRRY*FPTRSS
Trigger: GGAGCTACGTGTGGGGAACAAGTACCGCCTGGGACG...ATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CAA 90 bp GTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGACCTCTGTCCTTGGGTTGGAAAAGAGATCTaGCTGGCTAGACAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: VSKVTRASTRHHMDLCPWVGKEI*LARQSC
Trigger: ACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAAC...CCAAGGACAGAGGTCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CAA 90 bp GCCAATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTGTGCTCCTGGCCTGGTaGGAAAAGAGATCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: ANGYHLGQCPSREYKIHSVLLAW*EKRSCW
Trigger: CCAGCAAGATCTCTTTTCCAACCAGGCCAGGAGCAC...AGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS-3UTR CAA 90 bp TCTTGTGTGGATGAATTTCTACAAAACAGACCACACACAGATTGTCCCAGTGTATGTCCCAGTGTAAAGTaGAGTCCCCCGACGTGTCGG +
Preference number: 5 (lower is better)
Translates to: SCVDEFLQNRPHTDCPSVCPSVK*SPPTCR
Trigger: CCGACACGTCGGGGGACTCAACTTTACACTGGGACA...TACACTGGGACAATCTGTGTGTGGTCTGTTTTGTAGAAATTCATCCACACAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS-3UTR CAA 90 bp GAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATGGAGCATTGAGTCAGAGATaGGCAAAGGATAAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ENIKGQQSHTSIHPSSYGALSQR*AKDKAV
Trigger: CACAGCCTTATCCTTTGCCAATCTCTGACTCAATGC...TCCATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405675.7
ENST00000413574.6
CDS-3UTR CAA 90 bp ATAGAAAACATAAAAGGTCAGCAAAGTCACACGAGCATCCACCCGTCATCATATCCAATGGCTACCATCTaGGACAGTGTCCGTGAATTT +
Preference number: 5 (lower is better)
Translates to: IENIKGQQSHTSIHPSSYPMATI*DSVREF
Trigger: AAATTCACGGACACTGTCCAAGATGGTAGCCATTGG...ATATGATGACGGGTGGATGCTCGTGTGACTTTGCTGACCTTTTATGTTTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405675.7
CDS-3UTR CAA 90 bp CCAATGGCTACCATCTTGGACAGTGTCCGTCTAGAGAATACAAAATCCATTCTTGTTGGAAAAGAGATCTaGCTGGCTAGACAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: PMATILDSVRLENTKSILVGKEI*LARQSC
Trigger: ACAAGACTGTCTAGCCAGCAAGATCTCTTTTCCAAC...AAGAATGGATTTTGTATTCTCTAGACGGACACTGTCCAAGATGGTAGCCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS GCA 72 bp CCCAAACGCCCGTCATCCAACGAGCGGGCGCAGCCTTaGGAACCCCCAGGTCCGGGCGCCGGGGCCGGGAGA +
Preference number: 6 (lower is better)
Translates to: PKRPSSNERAQP*EPPGPGAGAGR
Trigger: TCTCCCGGCCCCGGCGCCCGGACCTGGGGGTTCGCAAGGCTGCGCCCGCTCGTTGGATGACGGGCGTTTGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430335.1
CDS CAA 90 bp TGCTGCGGGCACCCAGGAGGGACCCCAGGTGAAGCCAGATCCTCCTaGTTCCGACGGGAGACAGCGCCCTGCCTGGGCCCTGCTGCCCAT +
Preference number: 6 (lower is better)
Translates to: CCGHPGGTPGEARSS*FRRETAPCLGPAAH
Trigger: ATGGGCAGCAGGGCCCAGGCAGGGCGCTGTCTCCCGTCGGAACAAGGAGGATCTGGCTTCACCTGGGGTCCCTCCTGGGTGCCCGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS TCA 72 bp GGGCCGGGAGAGCAGGGGGCGCCGGTGATTGTCCGATaGAACGCTACGCGGGCCCGAATCAACAGTATCCGG +
Preference number: 6 (lower is better)
Translates to: GPGEQGAPVIVR*NATRARINSIR
Trigger: CCGGATACTGTTGATTCGGGCCCGCGTAGCGTTTCATCGGACAATCACCGGCGCCCCCTGCTCTCCCGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430335.1
CDS GCA 72 bp CTTGTTCCGACGGGAGACAGCGCCCTGCCTGGGCCCTaGTGCCCATGGTGGCACAAGCTGTCAGCACGGATG +
Preference number: 6 (lower is better)
Translates to: LVPTGDSALPGP*CPWWHKLSARM
Trigger: CATCCGTGCTGACAGCTTGTGCCACCATGGGCAGCAGGGCCCAGGCAGGGCGCTGTCTCCCGTCGGAACAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612795.2
CDS CCA 72 bp GTCCCAGGCGGTACTTGTTCCCCACACGTAGCTCCATaGCTCACTCTTGCCCGCCGGGAAGGCGCCGATGCC +
Preference number: 6 (lower is better)
Translates to: VPGGTCSPHVAP*LTLARREGADA
Trigger: GGCATCGGCGCCTTCCCGGCGGGCAAGAGTGAGCCATGGAGCTACGTGTGGGGAACAAGTACCGCCTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396832.6
ENST00000403904.5
ENST00000405675.7
ENST00000413574.6
CDS CCA 72 bp ACCCCTCCACAACACATTGGTCTCTTTCTGGGGCCCTaGGAGCTTCTAGGTCGGCTGGGCTGGCTGCATCTG +
Preference number: 6 (lower is better)
Translates to: TPPQHIGLFLGP*ELLGRLGWLHL
Trigger: CAGATGCAGCCAGCCCAGCCGACCTAGAAGCTCCCAGGGCCCCAGAAAGAGACCAATGTGTTGTGGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS CCA 72 bp GAGGGACTTCCAGGAAGGCGGTCAGACCAGCAGCAGTaGGTGGAGAGGTGCTCCTGGCGAATTTCAGCATGT +
Preference number: 6 (lower is better)
Translates to: EGLPGRRSDQQQ*VERCSWRISAC
Trigger: ACATGCTGAAATTCGCCAGGAGCACCTCTCCACCCACTGCTGCTGGTCTGACCGCCTTCCTGGAAGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413574.6
ENST00000498529.5
CDS CCA 72 bp CTAGGTCGGCTGGGCTGGCTGCATCTGCAGCAGTCATaGACTCACCTAAGCAAACACTGGTCCAATGGGGGC +
Preference number: 6 (lower is better)
Translates to: LGRLGWLHLQQS*THLSKHWSNGG
Trigger: GCCCCCATTGGACCAGTGTTTGCTTAGGTGAGTCCATGACTGCTGCAGATGCAGCCAGCCCAGCCGACCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS GCA 72 bp GGGAGAGGTCAGAGTGTGAGCCCATGGCCCCGTCTCTaGTGGGAACCAACCTTCCAAAATATGTTAAGGCAG +
Preference number: 6 (lower is better)
Translates to: GRGQSVSPWPRL*WEPTFQNMLRQ
Trigger: CTGCCTTAACATATTTTGGAAGGTTGGTTCCCAGCAGAGACGGGGCCATGGGCTCACACTCTGACCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS CCA 72 bp GTCCCAGGCGGTACTTGTTCCCCACACGTAGCTCCATaGCTCACTCTTGATTCTCCTCCCGTGGAAAAACGA +
Preference number: 6 (lower is better)
Translates to: VPGGTCSPHVAP*LTLDSPPVEKR
Trigger: TCGTTTTTCCACGGGAGGAGAATCAAGAGTGAGCCATGGAGCTACGTGTGGGGAACAAGTACCGCCTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359867.7
CDS CCA 72 bp CGTGTCGGACTACTGCCTAAGCAAACACTGGTCCAATaGGGGCTCTCCTCACTTCCCGAGATGGTCAAATGG +
Preference number: 6 (lower is better)
Translates to: RVGLLPKQTLVQ*GLSSLPEMVKW
Trigger: CCATTTGACCATCTCGGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGGCAGTAGTCCGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431632.5
CDS CCA 72 bp CATCTGCAGCAGTCATGGACTCACCTAAGCAAACACTaGTCCAATGGGGGCTCTCCTCACTTCCCGAGATGG +
Preference number: 6 (lower is better)
Translates to: HLQQSWTHLSKH*SNGGSPHFPRW
Trigger: CCATCTCGGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGGTGAGTCCATGACTGCTGCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS CCA 72 bp GCAGTCATGGACTCACCTAAGCAAACACTGGTCCAATaGGGGCTCTCCTCACTTCCCGAGATGGTCAAATGG +
Preference number: 6 (lower is better)
Translates to: AVMDSPKQTLVQ*GLSSLPEMVKW
Trigger: CCATTTGACCATCTCGGGAAGTGAGGAGAGCCCCCATTGGACCAGTGTTTGCTTAGGTGAGTCCATGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495232.5
CDS TCA 72 bp TGCTCAAGAGGGCTCATCAGACCTCAGAGGATTAAATaGGGCCAAGTCCTGGCTCTACAGAAGGGGTTCACT +
Preference number: 6 (lower is better)
Translates to: CSRGLIRPQRIK*GQVLALQKGFT
Trigger: AGTGAACCCCTTCTGTAGAGCCAGGACTTGGCCTCATTTAATCCTCTGAGGTCTGATGAGCCCTCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494610.1
CDS CAA 72 bp TTAAAAATGTGTCGCATGTGGCCAATGGCTACCATCTaGGACAGTGTCCGTGAATTTCAGCATGTTCCAGTC +
Preference number: 6 (lower is better)
Translates to: LKMCRMWPMATI*DSVREFQHVPV
Trigger: GACTGGAACATGCTGAAATTCACGGACACTGTCCAAGATGGTAGCCATTGGCCACATGCGACACATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405675.7