Pregenerated sensors for CSNK1A1L (Homo sapiens)
Ensembl gene IDs: ENSG00000180138Ensembl transcript IDs: ENST00000379800.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCAGAATGCTCTTTATGTaGACAATTTGCAAACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGRMLFM*TICKPQ Trigger: CTGGGGTTTGCAAATTGTTCACATAAAGAGCATTCT...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| 3UTR-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCTTTACACCAACTAAATaGTTGTTCACAGCCACTAGC | + |
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Preference number: 2 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGFTPTK*LFTATS Trigger: GCTAGTGGCTGTGAACAACCATTTAGTTGGTGTAAA...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| 3UTR-3UTR CAA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCACACCAACTAAATGGTaGTTCACAGCCACTAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGTPTKW*FTATSW Trigger: CCAGCTAGTGGCTGTGAACAACCATTTAGTTGGTGT...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCCCTCTAGGGGAGGATaGAGGCCTCCGGGGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGPSRGG*RPPGPT Trigger: GGTGGGCCCCGGAGGCCTCCATCCTCCCCTAGAGGG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR GCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCTCGGTGGCGGTCGCTaGCTCGCTGTCGTGGCGATG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGLGGGR*LAVVAM Trigger: CATCGCCACGACAGCGAGGCAGCGACCGCCACCGAG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCGCTACCAACGGCTGTaGGCCAGAGGGCCCGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGRYQRL*ARGPGH Trigger: GTGACCGGGCCCTCTGGCCCACAGCCGTTGGTAGCG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR TCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGGCGATGTCGTGGGCTaGGAAAGGGGGCACAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGGDVVG*ERGHSE Trigger: CTCGCTGTGCCCCCTTTCTCAGCCCACGACATCGCC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR TCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGGCGTGGAGTCAGCCTaGTCCCTGCAGCACACCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGGVESA*SLQHTR Trigger: CCTGGTGTGCTGCAGGGATCAGGCTGACTCCACGCC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGGGGGCACAGCGAGTTaGGGCAGCAGTACTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGGGTAS*GSSTAA Trigger: GGCAGCAGTACTGCTGCCCCAACTCGCTGTGCCCCC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR GCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGGGCAGCAGTACTGCTaGCACCGCTACCAACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGGQQYC*HRYQRL Trigger: CAGCCGTTGGTAGCGGTGGCAGCAGTACTGCTGCCC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGCTGCCTCGCTGTCGTaGCGATGTCGTGGGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGAASLS*RCRGLR Trigger: TCTCAGCCCACGACATCGCCACGACAGCGAGGCAGC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGAGGGCTGCTGGAAATaGCCACCGAGGCGTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGEGCWK*PPRRFP Trigger: CGGGAAACGCCTCGGTGGCCATTTCCAGCAGCCCTC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR GCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCTTGGGGCAGCAGTACTaGTGCCACCGCTACCAACGG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGLGQQY*CHRYQR Trigger: CCGTTGGTAGCGGTGGCAGCAGTACTGCTGCCCCAA...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR GCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGCTGAGGATGAGGGCTaGTGGAAATGGCCACCGAGG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGAEDEG*WKWPPR Trigger: CCTCGGTGGCCATTTCCAGCAGCCCTCATCCTCAGC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGTCGTGGCGATGTCGTaGGCTGAGAAAGGGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGVVAMS*AEKGGT Trigger: TGTGCCCCCTTTCTCAGCCCACGACATCGCCACGAC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCGGTGTTACAGGGCGTaGAGTCAGCCTGATCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGRCYRA*SQPDPC Trigger: GCAGGGATCAGGCTGACTCCACGCCCTGTAACACCG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGAGGATGAGGGCTGCTaGAAATGGCCACCGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGEDEGC*KWPPRR Trigger: ACGCCTCGGTGGCCATTTCCAGCAGCCCTCATCCTC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR TCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCGCCGTTGGTGGTGGTaGTGCCCAGATAAACGTCTC | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGRRWWW*CPDKRL Trigger: GAGACGTTTATCTGGGCATCACCACCACCAACGGCG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCTCAAGGTTCCAGGCTaGGCCACCACCTCTTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGLKVPG*ATTSFS Trigger: CGAGAAAGAGGTGGTGGCCCAGCCTGGAACCTTGAG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR GCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCGCCAGGCCACAGTTTaGGAGGGTTTCTCAAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGRQATV*EGFSRF Trigger: GAACCTTGAGAAACCCTCGCAAACTGTGGCCTGGCG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR GCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCAGATTCCAGCTTCACTaGTACGTCCTCGCCGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGRFQLH*YVLAVG Trigger: ACCAACGGCGAGGACGTAGCAGTGAAGCTGGAATCT...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCAACGAGTTCGGCTTTaGAGCCGCTGTTGTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGQRVRL*SRCCLS Trigger: TGACAAACAACAGCGGCTCCAAAGCCGAACTCGTTG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR TCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGTCCCAGAAGGTCCATaGCTAGCACATTGTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGVPEGP*LAHCCL Trigger: AAGACAACAATGTGCTAGTCATGGACCTTCTGGGAC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR TCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCTTGTTGTCTTTTTCCTaGCCATACCAGTGCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGLLSFS*PYQCMW Trigger: CCACATGCACTGGTATGGTCAGGAAAAAGACAACAA...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCATTCTGCTGATCATCTaGTCGGCTAACATAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGILLII*SANIST Trigger: TGTACTTATGTTAGCCGACCAGATGATCAGCAGAAT...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CCA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCAAAACTGGAATTTTTaGTTACTACTAGATCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGQNWNF*LLLDQL Trigger: CAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS CCA 90 bp | GGCCTCCGGGGCCCACCGGCCCGCAAGGCTGAGGATGAGGGCTGCTaGAAATGGCCACCGAGGCGTTTCCCGGTGTTACAGGGCGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GLRGPPARKAEDEGC*KWPPRRFPVLQGVE Trigger: CTCCACGCCCTGTAACACCGGGAAACGCCTCGGTGGCCATTTCCAGCAGCCCTCATCCTCAGCCTTGCGGGCCGGTGGGCCCCGGAGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS CCA 90 bp | GCTGTCGTGGCGATGTCGTGGGCTGAGAAAGGGGGCACAGCGAGTTaGGGCAGCAGTACTGCTGCCACCGCTACCAACGGCTGTGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: AVVAMSWAEKGGTAS*GSSTAATATNGCGP Trigger: TGGCCCACAGCCGTTGGTAGCGGTGGCAGCAGTACTGCTGCCCCAACTCGCTGTGCCCCCTTTCTCAGCCCACGACATCGCCACGACAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS CCA 90 bp | GCTGCTGGAAATGGCCACCGAGGCGTTTCCCGGTGTTACAGGGCGTaGAGTCAGCCTGATCCCTGCAGCACACCAGGATTTCCGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: AAGNGHRGVSRCYRA*SQPDPCSTPGFPPG Trigger: GCCTGGCGGAAATCCTGGTGTGCTGCAGGGATCAGGCTGACTCCACGCCCTGTAACACCGGGAAACGCCTCGGTGGCCATTTCCAGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS GCA 90 bp | CGAGGCGTTTCCCGGTGTTACAGGGCGTGGAGTCAGCCTGATCCCTaGAGCACACCAGGATTTCCGCCAGGCCACAGTTTGCGAGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: RGVSRCYRAWSQPDP*STPGFPPGHSLRGF Trigger: AAACCCTCGCAAACTGTGGCCTGGCGGAAATCCTGGTGTGCTGCAGGGATCAGGCTGACTCCACGCCCTGTAACACCGGGAAACGCCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCAGGGGGCACAGCGAGTaGGGGCAGCAGTACTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGRGHSE*GQQYCC Trigger: GCAGCAGTACTGCTGCCCCAACTCGCTGTGCCCCCT...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGCCGGCGCCGCCATTTaGTTCCTCCACCTCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGAGAAI*FLHLSQ Trigger: TTGGCTGAGGTGGAGGAACAAAATGGCGGCGCCGGC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGCTACGTCCTCGCCGTaGGTGGTGGTGATGCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGATSSP*VVVMPR Trigger: TCTGGGCATCACCACCACCAACGGCGAGGACGTAGC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCCCGCCAGGCCACAGTTaGCGAGGGTTTCTCAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGPPGHS*RGFLKV Trigger: AACCTTGAGAAACCCTCGCAAACTGTGGCCTGGCGG...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCGCTTTGGAGCCGCTGTaGTTTGTCATCCTGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGALEPL*FVILRG Trigger: GCCTCTCAGGATGACAAACAACAGCGGCTCCAAAGC...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTTCCTATTCTCAAAACTGGAATTTTTGGTTACTACTAGATCAGCTGGCACAACGAGTTCGGCTTaGGAGCCGCTGTTGTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: ESFLFSKLEFLVTTRSAGTTSSA*EPLLFV Trigger: GACAAACAACAGCGGCTCCAAAGCCGAACTCGTTGT...GCCAGCTGATCTAGTAGTAACCAAAAATTCCAGTTTTGAGAATAGGAAAGATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS GCA 72 bp | GAAAGGGGGCACAGCGAGTTGGGGCAGCAGTACTGCTaGCACCGCTACCAACGGCTGTGGGCCAGAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: ERGHSELGQQYC*HRYQRLWARGP Trigger: GGGCCCTCTGGCCCACAGCCGTTGGTAGCGGTGGCAGCAGTACTGCTGCCCCAACTCGCTGTGCCCCCTTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS CCA 72 bp | GGCCCACCGGCCCGCAAGGCTGAGGATGAGGGCTGCTaGAAATGGCCACCGAGGCGTTTCCCGGTGTTACAG | + |
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Preference number: 6 (lower is better) Translates to: GPPARKAEDEGC*KWPPRRFPVLQ Trigger: CTGTAACACCGGGAAACGCCTCGGTGGCCATTTCCAGCAGCCCTCATCCTCAGCCTTGCGGGCCGGTGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS GCA 72 bp | AGGCTGGGCCACCACCTCTTTCTCGGTGGCGGTCGCTaGCTCGCTGTCGTGGCGATGTCGTGGGCTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: RLGHHLFLGGGR*LAVVAMSWAEK Trigger: TTTCTCAGCCCACGACATCGCCACGACAGCGAGGCAGCGACCGCCACCGAGAAAGAGGTGGTGGCCCAGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS CCA 72 bp | GCGATGTCGTGGGCTGAGAAAGGGGGCACAGCGAGTTaGGGCAGCAGTACTGCTGCCACCGCTACCAACGGC | + |
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Preference number: 6 (lower is better) Translates to: AMSWAEKGGTAS*GSSTAATATNG Trigger: GCCGTTGGTAGCGGTGGCAGCAGTACTGCTGCCCCAACTCGCTGTGCCCCCTTTCTCAGCCCACGACATCGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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| CDS CCA 72 bp | GGCCACAGTTTGCGAGGGTTTCTCAAGGTTCCAGGCTaGGCCACCACCTCTTTCTCGGTGGCGGTCGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GHSLRGFLKVPG*ATTSFSVAVAA Trigger: GGCAGCGACCGCCACCGAGAAAGAGGTGGTGGCCCAGCCTGGAACCTTGAGAAACCCTCGCAAACTGTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379800.4 |
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