RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSMD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000164796

Ensembl transcript IDs: ENST00000297405.10, ENST00000339701.7, ENST00000343508.7, ENST00000455883.2, ENST00000462254.1, ENST00000492692.1, ENST00000493303.1, ENST00000497026.5, ENST00000519485.1, ENST00000534172.1

Found 1427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACTCTGTCTCATaGTACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAA +
Preference number: 1 (lower is better)
Translates to: AALPGARVSLRHSVS*YKKSRLFTELSIFE
Trigger: TTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTATCATGAGACAGAGTGCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR TCA 90 bp CTCATGATACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTaGAAGGGACAACAACAAAGAGTTAACACTGGGTACATGATCGTA +
Preference number: 1 (lower is better)
Translates to: LMIQKVKTVHRVIHI*KGQQQRVNTGYMIV
Trigger: TACGATCATGTACCCAGTGTTAACTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTATCATGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACAGATTTGTGGGCGTaGTGTAGCTCAGGACAGTTA +
Preference number: 2 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTDLWA*CSSGQL
Trigger: TAACTGTCCTGAGCTACATCACGCCCACAAATCTGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTACCCCATAGCTCACTaGATAATACTGGTTACTCCA +
Preference number: 2 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGYPIAH*IILVTP
Trigger: TGGAGTAACCAGTATTATTCAGTGAGCTATGGGGTA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGTGAGGAAACATACTaGAGCTACTATCACATTTGG +
Preference number: 2 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGEETY*SYYHIW
Trigger: CCAAATGTGATAGTAGCTTCAGTATGTTTCCTCACC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTTTCTGCCAGCCAAATaGTTTTTGGGTGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGFLPAK*FLGEET
Trigger: TGTTTCCTCACCCAAAAACCATTTGGCTGGCAGAAA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCTGGCATTACTGTATaGTACAGTTTAAATGAGCCA +
Preference number: 2 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGAGITV*YSLNEP
Trigger: TGGCTCATTTAAACTGTATCATACAGTAATGCCAGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGATTCAAATTGGAATaGGAAACCTTATGTCTTCCG +
Preference number: 2 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGRFKLE*ETLCLP
Trigger: CGGAAGACATAAGGTTTCCCATTCCAATTTGAATCT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAATACTGATAGTGGATaGTCCTCCAATATATGCAAA +
Preference number: 2 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNTDSG*SSNICK
Trigger: TTTGCATATATTGGAGGAGCATCCACTATCAGTATT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTTTCTAGATAATTTCTaGCAGCCAAATGGTTTTTGG +
Preference number: 2 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGFLDNF*QPNGFW
Trigger: CCAAAAACCATTTGGCTGGCAGAAATTATCTAGAAA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGGGAGGGTAGCACAATaGACTTGCCCTTTGCAGAAA +
Preference number: 2 (lower is better)
Translates to: KSRLFTELSIFERDNNKEGRVAQ*TCPLQK
Trigger: TTTCTGCAAAGGGCAAGTTCATTGTGCTACCCTCCC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGGAGGGTAGCACAATaGACTTGCCCTTTGCAGAAA +
Preference number: 2 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGRVAQ*TCPLQK
Trigger: TTTCTGCAAAGGGCAAGTTCATTGTGCTACCCTCCC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACACAGATTTGTGGGCGTaGTGTAGCTCAGGACAGTTA +
Preference number: 2 (lower is better)
Translates to: YKKSRLFTELSIFERDNNTDLWA*CSSGQL
Trigger: TAACTGTCCTGAGCTACATCACGCCCACAAATCTGT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTACCCCATAGCTCACTaGATAATACTGGTTACTCCA +
Preference number: 2 (lower is better)
Translates to: KSRLFTELSIFERDNNKEYPIAH*IILVTP
Trigger: TGGAGTAACCAGTATTATTCAGTGAGCTATGGGGTA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTTCTGCCAGCCAAATaGTTTTTGGGTGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: KSRLFTELSIFERDNNKEFLPAK*FLGEET
Trigger: TGTTTCCTCACCCAAAAACCATTTGGCTGGCAGAAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGTGAGGAAACATACTaGAGCTACTATCACATTTGG +
Preference number: 2 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGEETY*SYYHIW
Trigger: CCAAATGTGATAGTAGCTTCAGTATGTTTCCTCACC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCTGGCATTACTGTATaGTACAGTTTAAATGAGCCA +
Preference number: 2 (lower is better)
Translates to: KSRLFTELSIFERDNNKEAGITV*YSLNEP
Trigger: TGGCTCATTTAAACTGTATCATACAGTAATGCCAGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAATGAACTTGCCCTTTaGAGAAACTATGACAACCAG +
Preference number: 2 (lower is better)
Translates to: KSRLFTELSIFERDNNKENELAL*RNYDNQ
Trigger: CTGGTTGTCATAGTTTCTGCAAAGGGCAAGTTCATT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGCAAATAAACTGTaGGTAAGCACTCTCAGAGTG +
Preference number: 2 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKANKL*VSTLRV
Trigger: CACTCTGAGAGTGCTTACTCACAGTTTATTTGCTTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGATTCAAATTGGAATaGGAAACCTTATGTCTTCCG +
Preference number: 2 (lower is better)
Translates to: KSRLFTELSIFERDNNKERFKLE*ETLCLP
Trigger: CGGAAGACATAAGGTTTCCCATTCCAATTTGAATCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAATACTGATAGTGGATaGTCCTCCAATATATGCAAA +
Preference number: 2 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNTDSG*SSNICK
Trigger: TTTGCATATATTGGAGGAGCATCCACTATCAGTATT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTTCTAGATAATTTCTaGCAGCCAAATGGTTTTTGG +
Preference number: 2 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFLDNF*QPNGFW
Trigger: CCAAAAACCATTTGGCTGGCAGAAATTATCTAGAAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGAAGTCAGTGATCTATaGACTCTTGTAAGTATAGCT +
Preference number: 3 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGEVSDL*TLVSIA
Trigger: AGCTATACTTACAAGAGTCAATAGATCACTGACTTC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGTAGCACAATGAACTaGCCCTTTGCAGAAACTATG +
Preference number: 3 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGSTMN*PFAETM
Trigger: CATAGTTTCTGCAAAGGGCAAGTTCATTGTGCTACC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR TCA 72 bp CAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTaGAAGGGACAACAACAAAGAGTTAACACTGGGTAC +
Preference number: 3 (lower is better)
Translates to: QKVKTVHRVIHI*KGQQQRVNTGY
Trigger: GTACCCAGTGTTAACTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGAAGTCAGTGATCTATaGACTCTTGTAAGTATAGCT +
Preference number: 3 (lower is better)
Translates to: YKKSRLFTELSIFERDNNEVSDL*TLVSIA
Trigger: AGCTATACTTACAAGAGTCAATAGATCACTGACTTC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR TCA 72 bp CTCCATGGTAAACATGAAGAATTATGGTCCAGTTTATaGAAAAACACTCTTCTGTATCATTCCTCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: LHGKHEELWSSL*KNTLLYHSSGK
Trigger: TTTTCCTGAGGAATGATACAGAAGAGTGTTTTTTCATAAACTGGACCATAATTCTTCATGTTTACCATGGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
3UTR CCA 72 bp ATTTTTCTAGATAATTTCTGCCAGCCAAATGGTTTTTaGGTGAGGAAACATACTGAAGCTACTATCACATTT +
Preference number: 3 (lower is better)
Translates to: IFLDNFCQPNGF*VRKHTEATITF
Trigger: AAATGTGATAGTAGCTTCAGTATGTTTCCTCACCCAAAAACCATTTGGCTGGCAGAAATTATCTAGAAAAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATTCATGGGGACCCCTaGGTCACGACACGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGIHGDP*VTTRSG
Trigger: GCCACTGCGTGTCGTGACCCAGGGGTCCCCATGAAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCTATGCAGGTGAGCTaGGGGTGGCCATCAAGGATG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGAMQVS*GWPSRM
Trigger: CATCCTTGATGGCCACCCTCAGCTCACCTGCATAGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTCCTGGCCATCCTGGTaGGAGAATCACTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSWPSW*ENHSTG
Trigger: CCCAGTGGAGTGATTCTCTCACCAGGATGGCCAGGA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCTTTGCACTCTGGCTaGCTTCCGGTCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGALHSG*LPVQLP
Trigger: TGGCAGTTGGACCGGAAGGCAGCCAGAGTGCAAAGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCACACTGCACAGCTTTaGACTCTGGCTGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGHTAQL*TLAAFR
Trigger: CCGGAAGGCAGCCAGAGTGCAAAGCTGTGCAGTGTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTTCGAGTCCCATTCATaGGGACCCCTGGGTCACGAC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGFESHS*GPLGHD
Trigger: GTCGTGACCCAGGGGTCCCCATGAATGGGACTCGAA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGGTGCTATACAGACTaGTGGGCTGGGCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGCYTD*WAGLPE
Trigger: TTCTGGCAGCCCAGCCCACCAGTCTGTATAGCACCC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTCCTGTCTAGAGCCATaGCCGGGAGTACCTGGATCG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSCLEP*PGVPGS
Trigger: CGATCCAGGTACTCCCGGCCATGGCTCTAGACAGGA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCACTCCACTGGGAGCTaGAAAATGGCCACCACATGG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGHSTGS*KMATTW
Trigger: CCATGTGGTGGCCATTTTTCAGCTCCCAGTGGAGTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCAGGACAGAGCACTTaGCAAACTGGAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGAGQST*QTGGAP
Trigger: TGGAGCACCTCCAGTTTGTCAAGTGCTCTGTCCTGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTTGGCCTGGCACTGTaGCTTTGTTGGCCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVGLAL*LCWPLH
Trigger: ATGCAAGGGCCAACAAAGGCACAGTGCCAGGCCAAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCTGGGTTACCACACTaGACAGCTTTGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPGLPH*TALHSG
Trigger: GCCAGAGTGCAAAGCTGTGCAGTGTGGTAACCCAGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTACAGACTGGTGGGCTaGGCTGCCAGAAGTACCGAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGYRLVG*AARSTD
Trigger: ATCGGTACTTCTGGCAGCCCAGCCCACCAGTCTGTA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCACAGCTTTGCACTCTaGCTGCCTTCCGGTCCAACT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGHSFAL*LPSGPT
Trigger: AGTTGGACCGGAAGGCAGCCAGAGTGCAAAGCTGTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTAACAACTTGCACTTaGATGCCAGCTCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLTTCT*MPAPSG
Trigger: GCCAGAGGGAGCTGGCATTCAAGTGCAAGTTGTTAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGGTTTGGATTCCTTTaGTCGGCTTTCCCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGFGFL*SAFPFA
Trigger: CGCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTGTGTCCCCAGGCTCTaGTACAATGGTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGCVPRL*YNGPSA
Trigger: TGCACTTGGACCATTGTAGCAGAGCCTGGGGACACA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTCCCCAAACCGCCGTaGATTGATTGGTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVPKPP*IDWYSR
Trigger: CCTGGAATACCAATCAATGCACGGCGGTTTGGGGAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCAGAGGATAGTCCCATaGCCTTCTCTCCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGQRIVP*PSLPCH
Trigger: ATGACAGGGGAGAGAAGGGCATGGGACTATCCTCTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATTGCCTCCACAGGGTaGTATACAGACTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGIASTG*YTDWWA
Trigger: AGCCCACCAGTCTGTATAGCACCCTGTGGAGGCAAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCAACTTGCACTTGAATaGCAGCTCCCTCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGQLALE*QLPLAL
Trigger: CAGTGCCAGAGGGAGCTGGCATTCAAGTGCAAGTTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCTGGGTGTTCCCAGTaGAGGTCTAGGATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGAGCSQ*RSRIFH
Trigger: GTGAAAGATCCTAGACCTGCACTGGGAACACCCAGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCGCCGTGCATTGATTaGTATTCCAGGATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPPCID*YSRIRA
Trigger: TGCCCTGATCCTGGAATACCAATCAATGCACGGCGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTTGACAGGCAGGGACTaGCGCATCCCATGCATGATA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLTGRD*RIPCMI
Trigger: TATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGATCTGGGGAGGAGTTaGGCAGGTAACAGCTCTACA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGDLGRS*AGNSST
Trigger: TGTAGAGCTGTTACCTGCCCAACTCCTCCCCAGATC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAGGAAGATGGTATTTaGGGACCACTAAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKEDGI*GPLSRP
Trigger: TGGCCGGCTTAGTGGTCCTCAAATACCATCTTCCTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTGACCGATCTGAGGTaGATTTTGGTCTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLTDLR*ILVWSI
Trigger: GATGGACCAGACCAAAATTCACCTCAGATCGGTCAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTAGGCTCTATGCAGTaGGGTGATGAACCACTCCAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVGSMQ*GDEPLQ
Trigger: TTGGAGTGGTTCATCACCTCACTGCATAGAGCCTAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCGAATGTATTGTTCTaGGATCCATGCCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPNVLF*DPCRGT
Trigger: TGTGCCTCGGCATGGATCTCAGAACAATACATTCGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGTATGCATTCAGGCTaGATCCCACTCCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGMHSG*IPLHVR
Trigger: TCTTACGTGGAGTGGGATTCAGCCTGAATGCATACC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGGAGGGTAGCACAATaGACTTGCCCTTTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGRVAQ*TCPLQK
Trigger: TTTCTGCAAAGGGCAAGTTCATTGTGCTACCCTCCC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGTACTTTGTGTATCTaGTGGATGAGGAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGTLCI*WMRREP
Trigger: GGGCTCTCTCCTCATCCAGCAGATACACAAAGTACC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGTGCTCCATCCATCTaGAGTCGTTCTCCTAATCTG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGAPSI*SRSPNL
Trigger: CAGATTAGGAGAACGACTGCAGATGGATGGAGCACC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGACTGGCGCATCCCATaGATGATACCCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGDWRIP*MIPIGR
Trigger: TCTTCCTATGGGTATCATGCATGGGATGCGCCAGTC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTACAGCTGTGGGGTATaGATTCAGGCTGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGYSCGV*IQAESH
Trigger: GTGGGATTCAGCCTGAATGCATACCCCACAGCTGTA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTTCCAGTCAGCACTTaGAGCACTGTCCTAGGATCT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLPVST*STVLGS
Trigger: AGATCCTAGGACAGTGCTCCAAGTGCTGACTGGAAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTGCTACCAGCAAAGTaGCCTTGGTCACTGATCTTG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVLPAK*PWSLIL
Trigger: CAAGATCAGTGACCAAGGCCACTTTGCTGGTAGCAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGAGCACTTGACAAACTaGAGGTGCTCCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGEHLTN*RCSIHL
Trigger: CAGATGGATGGAGCACCTCCAGTTTGTCAAGTGCTC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCACTTTGCACATAGGTaGAGGATGGCTCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGHFAHR*RMAPLS
Trigger: AGACAGTGGAGCCATCCTCCACCTATGTGCAAAGTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGAAGACTTTCCCATTaGCTGTGGTTCCTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGRLSH*LWFLGY
Trigger: GTAACCCAGGAACCACAGCCAATGGGAAAGTCTTCC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTCTCAGTCCATTGGCTaGTATACCTGGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSQSIG*YTWVST
Trigger: TGTGGAGACCCAGGTATACCAGCCAATGGACTGAGA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATGCCGAGGCACACCTaGGTTTTCACAAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGMPRHT*VFTRGL
Trigger: CAAACCTCTTGTGAAAACCCAGGTGTGCCTCGGCAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATGAGCAGGAGTTTCTaGCTGTTTACAGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGMSRSF*LFTAVG
Trigger: CCCCACAGCTGTAAACAGCCAGAAACTCCTGCTCAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCACCACCAAGACAGATaGTCTCTGATGTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGHHQDR*SLMFLP
Trigger: TGGAAGGAACATCAGAGATCATCTGTCTTGGTGGTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCTCCATGTTCCATCTaGTTGGCATACAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGAPCSI*LAYSCS
Trigger: ACTACAGCTGTATGCCAATCAGATGGAACATGGAGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCGAGGGGTCTTGTTATaGTTGCTCCATGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGRGVLL*LLHVPS
Trigger: AGATGGAACATGGAGCAATCATAACAAGACCCCTCG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCGAGCTCCTAATTCCTaGTCCTCAGCCCGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRAPNS*SSARRS
Trigger: ACTGCGCCGGGCTGAGGAGCAGGAATTAGGAGCTCG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297405.10
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGATACAGTAACATCTaGAGGTGTGCTAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGYSNI*RCASNS
Trigger: GCTGTTGCTAGCACACCTGCAGATGTTACTGTATCC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGCCATGTACAGGTATaGCAGGGTCCAAACAAGAAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGHVQV*QGPNKN
Trigger: ATTCTTGTTTGGACCCTGGCATACCTGTACATGGCC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAACTTTGGTAAGCACTaGGGTACTTCACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNFGKH*GTSPLQ
Trigger: CTGGAGTGGTGAAGTACCGCAGTGCTTACCAAAGTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCTATTGCTCAGTGTTaGGTTAACTCTCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGAIAQC*VNSPSG
Trigger: TCCACTGGGAGAGTTAACGCAACACTGAGCAATAGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACTGGAGGTGGCAGATaGAATCCTGTTAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTGGGR*NPVNLV
Trigger: GACAAGGTTAACAGGATTCCATCTGCCACCTCCAGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATCACAGGTTGGAAGTaGATGACTCCACCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGITGWK*MTPPVV
Trigger: AACCACTGGTGGAGTCATCCACTTCCAACCTGTGAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATAGCTTCCAAGTCTTaGAGCATTGTTGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGIASKS*SIVVSP
Trigger: GGGGGAGACAACAATGCTCCAAGACTTGGAAGCTAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATTTCGAAACGGGCGTaGATCAGGACAGCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGISKRA*IRTALQ
Trigger: TTGCAAAGCTGTCCTGATCCACGCCCGTTTCGAAAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTAGCCGTAATTCATTaGCAGGACAGAGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLAVIH*QDRALD
Trigger: GTCAAGTGCTCTGTCCTGCCAATGAATTACGGCTAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGACCCGCTAGGCATCTaGTTTCAGATTCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGDPLGI*FQIHSK
Trigger: TTTGGAGTGAATCTGAAACCAGATGCCTAGCGGGTC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTTCCATCGTGTAGCCTaGCTGGCACATGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGFHRVA*LAHVRN
Trigger: GTTTCTTACATGTGCCAGCCAGGCTACACGATGGAA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTTTTCTTCATCAGGATaGAGTCTAGGCGGCCACATT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGFSSSG*SLGGHI
Trigger: AATGTGGCCGCCTAGACTTCATCCTGATGAAGAAAA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCGAAGCTGTATTAACTaGATTGGCTATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGRSCIN*IGYAGE
Trigger: CTCACCTGCATAGCCAATTCAGTTAATACAGCTTCG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCATAGAGACCAGCATTaGTTGTTGGAGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGHRDQH*LLEEDL
Trigger: CAGATCTTCCTCCAACAATCAATGCTGGTCTCTATG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGTGGCCTTGGTCACTaGTCTTGTATCCAAATTGTG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSGLGH*SCIQIV
Trigger: CACAATTTGGATACAAGATCAGTGACCAAGGCCACT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTATGCGGATATGGATaGGGGAAGTTTGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLCGYG*GKFGER
Trigger: TCTTTCACCAAACTTCCCTCATCCATATCCGCATAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGTAACTTGCTGTCTTaGAAACTTCCAATCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGNLLS*KLPISG
Trigger: CCCACTGATTGGAAGTTTTCAAGACAGCAAGTTACC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGGTATTGTTGTTCCTaGATAGCTTCCAAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGYCCS*IASKSW
Trigger: CCAAGACTTGGAAGCTATTCAGGAACAACAATACCC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTCCGTGAAGGCATGTaGGAGCTGAATTTCCAATTA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLREGM*ELNFQL
Trigger: TAATTGGAAATTCAGCTCTCACATGCCTTCACGGAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCACCTTGGAAGTGGATaGTTCCAATTACGACTGACT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGHLGSG*FQLRLT
Trigger: AGTCAGTCGTAATTGGAATCATCCACTTCCAAGGTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTCGGCTTTCCCCTTTaGGGATCCCTTTCATATTAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLGFPL*GSLSYY
Trigger: ATAATATGAAAGGGATCCGCAAAGGGGAAAGCCGAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGACCCAGACACATTGTaGATTGCTGTCATACTGGAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGDPDTL*IAVILE
Trigger: TTCCAGTATGACAGCAATGCACAATGTGTCTGGGTC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTCGCCAGACAGGACTaGATTAGGAGGAACGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLARQD*IRRNAR
Trigger: CCTGGCGTTCCTCCTAATGCAGTCCTGTCTGGCGAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCTTTGCACTCTGGCTaGCTTCCGGTCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSALHSG*LPVQLP
Trigger: TGGCAGTTGGACCGGAAGGCAGCCAGAGTGCAAAGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCACACTGCACAGCTTTaGACTCTGGCTGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHTAQL*TLAAFR
Trigger: CCGGAAGGCAGCCAGAGTGCAAAGCTGTGCAGTGTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGAAGAAGGCAAAGGTTaGCTCGTTATACCATTGTGC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGEEGKG*LVIPLC
Trigger: GCACAATGGTATAACGAGGCAACCTTTGCCTTCTTC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTGAGAACACAGATTTaGTACTTGTCACTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVRTQI*YLSLEV
Trigger: CACCTCCAGTGACAAGTACCAAATCTGTGTTCTCAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCATTGCTGTCATACTaGAACGGAAAGTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGALLSY*NGKLGD
Trigger: ATCTCCCAACTTTCCGTTCCAGTATGACAGCAATGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAAGGTTCCAAGAATTaGGGATTCTGGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKGSKN*GFWRVT
Trigger: GGTGACTCTCCAGAATCCCCAATTCTTGGAACCTTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAAATGGCCACCACATaGGGCTCCACATTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKMATT*GSTFWN
Trigger: ATTCCAAAATGTGGAGCCCCATGTGGTGGCCATTTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTCATGGGGACCCCTaGGTCACGACACGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIHGDP*VTTRSG
Trigger: GCCACTGCGTGTCGTGACCCAGGGGTCCCCATGAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGAAGATTGCTGAGTTaGCCCATCATACACCTCAAC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGRRLLS*PIIHLN
Trigger: GTTGAGGTGTATGATGGGCCAACTCAGCAATCTTCT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGTGATTCTCCTGAATaGGATCCTGAGAGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSDSPE*DPERED
Trigger: ATCTTCCCTCTCAGGATCCCATTCAGGAGAATCACT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATGAGGTGGGGATTCTaGTGTACTACAGTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGMRWGF*CTTVES
Trigger: GCTTTCTACTGTAGTACACCAGAATCCCCACCTCAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATGGCCGGGAGTACCTaGATCGCCACATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSMAGST*IATCPS
Trigger: ACTGGGACATGTGGCGATCCAGGTACTCCCGGCCAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAACCGTGTTCAAGTTaGGATCAAATCGTACCGCCT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKPCSS*DQIVPP
Trigger: AGGCGGTACGATTTGATCCCAACTTGAACACGGTTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCTATGCAGGTGAGCTaGGGGTGGCCATCAAGGATG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEAMQVS*GWPSRM
Trigger: CATCCTTGATGGCCACCCTCAGCTCACCTGCATAGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTCCAAGGCTAAAATCTaGTCCGATTCTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSKAKI*SDSLPI
Trigger: AATGGGAAGAGAATCGGATCAGATTTTAGCCTTGGA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGAAAAGTGTGGAAGTTaGACTGCACACCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGEKCGS*TAHLFH
Trigger: ATGGAAAAGGTGTGCAGTTCAACTTCCACACTTTTC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCCCTGTCATGCACTTaGGAAGGCTACTTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPLSCT*EGYFRG
Trigger: TCCACGGAAGTAGCCTTCTCAAGTGCATGACAGGGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATAGCACCACCACACTaGGCTAAACAAATTGGGATT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGIAPPH*AKQIGI
Trigger: AATCCCAATTTGTTTAGCTCAGTGTGGTGGTGCTAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAACAGTACTAGTTTCTaGGGATCCACTTCGTACTTC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNSTSF*GSTSYF
Trigger: GAAGTACGAAGTGGATCCTCAGAAACTAGTACTGTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTGATAATATATCCATaGGGTGGGGATTCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLIIYP*GGDSGV
Trigger: TACACCAGAATCCCCACCTCATGGATATATTATCAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAGGAAAATTGCAGCTaGATGAAACCTCTGACTGGT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKENCS*MKPLTG
Trigger: ACCAGTCAGAGGTTTCATTCAGCTGCAATTTTCCTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTCCATGAGCACTAACTaGAAAATCACTGGTCAAACG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSMSTN*KITGQT
Trigger: CGTTTGACCAGTGATTTTGCAGTTAGTGCTCATGGA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTCATCACAAGAGAACTaGACAGTTGATCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSSQEN*TVDPRL
Trigger: TAGCCTTGGATCAACTGTGCAGTTCTCTTGTGATGA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAACTGTTCCCATTGGTaGAGTAAAGTTAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNCSHW*SKVRQA
Trigger: TGCCTGTCTAACTTTACTGCACCAATGGGAACAGTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTCGCCAGACAGGACTaGATTAGGAGGAACGCCAGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELARQD*IRRNAR
Trigger: CCTGGCGTTCCTCCTAATGCAGTCCTGTCTGGCGAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCTGGGTTACCACACTaGACAGCTTTGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPGLPH*TALHSG
Trigger: GCCAGAGTGCAAAGCTGTGCAGTGTGGTAACCCAGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATGAACCACTCCAAGTaGCATCTGCTTGACATATTC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGMNHSK*HLLDIF
Trigger: GAATATGTCAAGCAGATGGCACTTGGAGTGGTTCAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTCGTTATACCATTGTaGAAACCGTGTTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLVIPL*KPCSSW
Trigger: CCAACTTGAACACGGTTTGCACAATGGTATAACGAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTGTAAAGGTACCACTTaGTCCTTGAAGATTAGAGCC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGCKGTT*SLKIRA
Trigger: GGCTCTAATCTTCAAGGACCAAGTGGTACCTTTACA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCAAGGAAATCAAACTaGGATTCCAGGTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGARKSN*DSRSKS
Trigger: TGACTTTGACCTGGAATCCCAGTTTGATTTCCTTGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTGGGAGCTGAAAAATaGCCACCACATGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLGAEK*PPHGAP
Trigger: TGGAGCCCCATGTGGTGGCCATTTTTCAGCTCCCAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTGCACACCTTTTCCATaGGTTACATCAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGCTPFP*VTSTVH
Trigger: ATGGACTGTTGATGTAACCCATGGAAAAGGTGTGCA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTGGAGAGTGTAGCCTaGATTGCATCCATAAATGAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVESVA*IASIND
Trigger: ATCATTTATGGATGCAATCCAGGCTACACTCTCCAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTCGAGTCCCATTCATaGGGACCCCTGGGTCACGAC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEFESHS*GPLGHD
Trigger: GTCGTGACCCAGGGGTCCCCATGAATGGGACTCGAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTACAGACTGGTGGGCTaGGCTGCCAGAAGTACCGAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSYRLVG*AARSTD
Trigger: ATCGGTACTTCTGGCAGCCCAGCCCACCAGTCTGTA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGCATTGGGCACAGGTaGTGGAGGTTGGCACACCCT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESIGHR*WRLAHP
Trigger: AGGGTGTGCCAACCTCCACCACCTGTGCCCAATGCT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATTCACAATCAGTTCTaGAATTCCACAATGACCCGC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGIHNQF*NSTMTR
Trigger: GCGGGTCATTGTGGAATTCCAGAACTGATTGTGAAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCACTGTCTGTTGGCCTaGCACTGTGCCTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHCLLA*HCAFVG
Trigger: GCCAACAAAGGCACAGTGCCAGGCCAACAGACAGTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATGGCCGGGAGTACCTaGATCGCCACATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEMAGST*IATCPS
Trigger: ACTGGGACATGTGGCGATCCAGGTACTCCCGGCCAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCCTGTCTAGAGCCATaGCCGGGAGTACCTGGATCG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESCLEP*PGVPGS
Trigger: CGATCCAGGTACTCCCGGCCATGGCTCTAGACAGGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCACAGCTTTGCACTCTaGCTGCCTTCCGGTCCAACT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHSFAL*LPSGPT
Trigger: AGTTGGACCGGAAGGCAGCCAGAGTGCAAAGCTGTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATTGGCTGGTATACCTaGGTCTCCACAACTGATTAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGIGWYT*VSTTDY
Trigger: ATAATCAGTTGTGGAGACCCAGGTATACCAGCCAAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATTAGGCGAGCTTCCTaGCTTTTATATACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGIRRAS*LLYTPE
Trigger: TTCAGGGGTATATAAAAGCCAGGAAGCTCGCCTAAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCACTGACTTTGCGTTaGTGTCATACATGGGATTTT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPLTLR*CHTWDF
Trigger: AAAATCCCATGTATGACACCAACGCAAAGTCAGTGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAATTGGCTATGCAGGTaGGCTGAGGGTGGCCATCAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSNWLCR*AEGGHQ
Trigger: TTGATGGCCACCCTCAGCTCACCTGCATAGCCAATT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTATCCGTTGACAGGTaGTGCTCTTTGCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLSVDR*CSLRPV
Trigger: TACAGGGCGCAAAGAGCATCACCTGTCAACGGATAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACACTCCACTGGGAGCTaGAAAATGGCCACCACATGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHSTGS*KMATTW
Trigger: CCATGTGGTGGCCATTTTTCAGCTCCCAGTGGAGTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCCCTGTCATGCACTTaGGAAGGCTACTTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPLSCT*EGYFRG
Trigger: TCCACGGAAGTAGCCTTCTCAAGTGCATGACAGGGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGATGGTTACTATATTaGGGGTGCTATGAATTCCTT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGWLLY*GCYEFL
Trigger: AAGGAATTCATAGCACCCTCAATATAGTAACCATCC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGTGGCAACAGAACTTaGAAACTGAATTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSGNRT*KLNCKS
Trigger: GGATTTGCAATTCAGTTTTCAAGTTCTGTTGCCACT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAATCGAATTGTGATCTaGTTACCTGAACTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNRIVI*LPELSG
Trigger: TCCACTGAGTTCAGGTAATCAGATCACAATTCGATT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTGGGAAACATTCAAATaGAATGGTTTGACCCACAGT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGWETFK*NGLTHS
Trigger: ACTGTGGGTCAAACCATTTCATTTGAATGTTTCCCA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAGCGGTATTGCCACTaGACTGACCGATCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKRYCH*TDRSEV
Trigger: CACCTCAGATCGGTCAGTTCAGTGGCAATACCGCTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCAGGACAGAGCACTTaGCAAACTGGAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEAGQST*QTGGAP
Trigger: TGGAGCACCTCCAGTTTGTCAAGTGCTCTGTCCTGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGTCCATCATACACCTaGAGAACATCAAATTCCTTT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGPSYT*RTSNSF
Trigger: AAAGGAATTTGATGTTCTTCAGGTGTATGATGGACC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTCCACAGTCAATCATaGTACATTCTGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVHSQS*YILVKV
Trigger: AACCTTTACCAGAATGTATCATGATTGACTGTGGAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCAGGAATAAATGACTaGACTAGAAAATGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGAGIND*TRKCCA
Trigger: GGCACAACATTTTCTAGTTCAGTCATTTATTCCTGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTTGTTTCCTTCCTTTaGAATTGTAAGAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVVSFL*NCKSLS
Trigger: GGAAAGGCTCTTACAATTTCAAAGGAAGGAAACAAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCGCCTTCCCTTCCACTaGCTTTGCGTTGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRLPFH*LCVGVI
Trigger: TATGACACCAACGCAAAGTCAGTGGAAGGGAAGGCG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTACAATGGTCCAAGTaGAATCAGCATTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLQWSK*NQHCYG
Trigger: ACCATAACAATGCTGATTGCACTTGGACCATTGTAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTGTCTGTAACAAAATaGAGTCTGAGCCAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLSVTK*SLSQFL
Trigger: CAAAAACTGGCTCAGACTGCATTTTGTTACAGACAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACAGATGGGTATGTTTaGAGACCATTGGTTATTCTC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTDGYV*RPLVIL
Trigger: GAGAATAACCAATGGTCTGCAAACATACCCATCTGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTCCCCAAACCGCCGTaGATTGATTGGTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVPKPP*IDWYSR
Trigger: CCTGGAATACCAATCAATGCACGGCGGTTTGGGGAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCAGAGGATAGTCCCATaGCCTTCTCTCCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSQRIVP*PSLPCH
Trigger: ATGACAGGGGAGAGAAGGGCATGGGACTATCCTCTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTACTGGTGGGCTGGGCTaGCAGAAGTACCGATTTTCT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSTGGLG*QKYRFS
Trigger: AGAAAATCGGTACTTCTGGCAGCCCAGCCCACCAGT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCGACTGCAAATTCATTaGCAATTCTTCTTCCGAATC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGRLQIH*QFFFRI
Trigger: GATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCAACTTGCACTTGAATaGCAGCTCCCTCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSQLALE*QLPLAL
Trigger: CAGTGCCAGAGGGAGCTGGCATTCAAGTGCAAGTTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCTTTTCCACTGAAATaGTCCATGCACACATTTGAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPFPLK*SMHTFE
Trigger: TTCAAATGTGTGCATGGAGCATTTCAGTGGAAAAGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGGGTCTTGTTATGATTaGTCCATGTTCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGGSCYD*SMFHLI
Trigger: AATCAGATGGAACATGGAGCAATCATAACAAGACCC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCTTTGCACTCTGGCTaGCTTCCGGTCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEALHSG*LPVQLP
Trigger: TGGCAGTTGGACCGGAAGGCAGCCAGAGTGCAAAGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCTGGGTTACCACACTaGACAGCTTTGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPGLPH*TALHSG
Trigger: GCCAGAGTGCAAAGCTGTGCAGTGTGGTAACCCAGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCTGGGTGTTCCCAGTaGAGGTCTAGGATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSAGCSQ*RSRIFH
Trigger: GTGAAAGATCCTAGACCTGCACTGGGAACACCCAGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCAGTTTGCACCATTTaGATATCCATATGGAAAACC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGAVCTI*ISIWKT
Trigger: GGTTTTCCATATGGATATCCAAATGGTGCAAACTGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGGGAAAGATACAGATaGGTATGTTTGCAGACCATT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGRERYR*VCLQTI
Trigger: AATGGTCTGCAAACATACCCATCTGTATCTTTCCCT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAGAATTGGGGATTCTaGAGAGTCACCATCTTTAAC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKNWGF*RVTIFN
Trigger: GTTAAAGATGGTGACTCTCCAGAATCCCCAATTCTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCGCCGTGCATTGATTaGTATTCCAGGATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPPCID*YSRIRA
Trigger: TGCCCTGATCCTGGAATACCAATCAATGCACGGCGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTGGGAGCTGAAAAATaGCCACCACATGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELGAEK*PPHGAP
Trigger: TGGAGCCCCATGTGGTGGCCATTTTTCAGCTCCCAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCAGGTTATTGTCATATaGAAAAGGATAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGQVIVI*KRIARR
Trigger: TCTCCTGGCTATCCTTTTCCATATGACAATAACCTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTCGAGTCCCATTCATaGGGACCCCTGGGTCACGAC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEFESHS*GPLGHD
Trigger: GTCGTGACCCAGGGGTCCCCATGAATGGGACTCGAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTGCTATACAGACTGGTaGGCTGGGCTGCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSCYTDW*AGLPEV
Trigger: TACTTCTGGCAGCCCAGCCCACCAGTCTGTATAGCA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGGTGCTATACAGACTaGTGGGCTGGGCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGCYTD*WAGLPE
Trigger: TTCTGGCAGCCCAGCCCACCAGTCTGTATAGCACCC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGGCGCATGACAACTTaGCAAGGCTCTATTCCATCC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGRMTT*QGSIPS
Trigger: GGATGGAATAGAGCCTTGCCAAGTTGTCATGCGCCC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTTCACACCTTGGAAGTaGATGATTCCAATTACGACT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGFTPWK*MIPITT
Trigger: AGTCGTAATTGGAATCATCCACTTCCAAGGTGTGAA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAGAGCTTCACACCTTaGAAGTGGATGATTCCAATT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKSFTP*KWMIPI
Trigger: AATTGGAATCATCCACTTCCAAGGTGTGAAGCTCTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGCATTGGGCACAGGTaGTGGAGGTTGGCACACCCT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESIGHR*WRLAHP
Trigger: AGGGTGTGCCAACCTCCACCACCTGTGCCCAATGCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAATATATCCATGAGGTaGGGATTCTGGTGTACTACA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNISMR*GFWCTT
Trigger: TGTAGTACACCAGAATCCCCACCTCATGGATATATT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTGACAGGCAGGGACTaGCGCATCCCATGCATGATA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLTGRD*RIPCMI
Trigger: TATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTATTCCTCCATTTGTTaGAGCTTTAGGAATCCCACA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGYSSIC*SFRNPT
Trigger: TGTGGGATTCCTAAAGCTCCAACAAATGGAGGAATA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACACATAGGTGGAGGATaGCTCCACTGTCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHIGGG*LHCLLA
Trigger: GGCCAACAGACAGTGGAGCCATCCTCCACCTATGTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCCTGTCTAGAGCCATaGCCGGGAGTACCTGGATCG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESCLEP*PGVPGS
Trigger: CGATCCAGGTACTCCCGGCCATGGCTCTAGACAGGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCGTTGGTGTCATACATaGGATTTTCAAAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGRWCHT*DFQKLL
Trigger: AAGCAGCTTTTGAAAATCCCATGTATGACACCAACG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCAGCCAAATGGTTTTTaGGTGAGGAAACATACTGAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGQPNGF*VRKHTE
Trigger: TTCAGTATGTTTCCTCACCCAAAAACCATTTGGCTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGTGTATCTGCTGGATaGGGAGAGAGCCCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHECVSAG*GESPSL
Trigger: CAAGGACGGGCTCTCTCCTCATCCAGCAGATACACA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTACACTTTCGTCCGTTTaGAGGTGCAGCCACATTTGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSTLSSV*RCSHIW
Trigger: CCAAATGTGGCTGCACCTTCAAACGGACGAAAGTGT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACACTCCACTGGGAGCTaGAAAATGGCCACCACATGG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHSTGS*KMATTW
Trigger: CCATGTGGTGGCCATTTTTCAGCTCCCAGTGGAGTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGATCCAAGCAAGGGTaGCAGAAGATTTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRSKQG*QKIWPI
Trigger: GATGGGCCAAATCTTCTGTCACCCTTGCTTGGATCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATAACCCGAAGAGCATaGGAAGGTCAGAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSITRRA*EGQSVT
Trigger: GGTGACACTCTGACCTTCTCATGCTCTTCGGGTTAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATGAAATGTTCTGGCTaGAATATTGATTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGMKCSG*NIDSLS
Trigger: GGAAAGGGAATCAATATTTCAGCCAGAACATTTCAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAAGCACCTAGTAGATaGGTCGTTTTATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKAPSR*VVLSFP
Trigger: TGGAAAAGATAAAACGACTCATCTACTAGGTGCTTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATATTGAGGGTGCTATaGATTCCTTCAGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGILRVL*IPSGIR
Trigger: TCTTATTCCTGAAGGAATTCATAGCACCCTCAATAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCAAATGCATTGTATTTaGGCTGCTTTCTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGQMHCI*AAFYSL
Trigger: GAGAGAATAGAAAGCAGCTCAAATACAATGCATTTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAACAACATCGTGGAGTaGTGTCTGGAAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNNIVE*CLEKYK
Trigger: TTTGTATTTTTCCAGACATCACTCCACGATGTTGTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATCAAAAAGAACCGATaGACCGACTGCAAATTCATT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGIKKNR*TDCKFI
Trigger: AATGAATTTGCAGTCGGTTCATCGGTTCTTTTTGAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAGGAAGATGGTATTTaGGGACCACTAAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKEDGI*GPLSRP
Trigger: TGGCCGGCTTAGTGGTCCTCAAATACCATCTTCCTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTACGACTGACTCCGTaGAGGCATGTGAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLRLTP*RHVRAE
Trigger: TTCAGCTCTCACATGCCTTCACGGAGTCAGTCGTAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAATCCTGGAAGACACTaGTACCTAATAATATCACCT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNPGRH*YLIISP
Trigger: AGGTGATATTATTAGGTATCAGTGTCTTCCAGGATT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATAAGCACTGGACTTTaGATATTTGGTCCATCATAC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGISTGL*IFGPSY
Trigger: GTATGATGGACCAAATATTCAAAGTCCAGTGCTTAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGTGAGTTCTTTGGATaGCAATCGATATCCATCATT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSEFFG*QSISII
Trigger: AATGATGGATATCGATTGTCATCCAAAGAACTCACT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCTGGAATTCCACAATaGCCCGCTAGGCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSGIPQ*PARHLV
Trigger: AACCAGATGCCTAGCGGGTCATTGTGGAATTCCAGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCGAATGTATTGTTCTaGGATCCATGCCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPNVLF*DPCRGT
Trigger: TGTGCCTCGGCATGGATCTCAGAACAATACATTCGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACAACACTTCCTACTTaGAATCCGAATGTATTGTTC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTTLPT*NPNVLF
Trigger: GAACAATACATTCGGATTTCAAGTAGGAAGTGTTGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGTATGCATTCAGGCTaGATCCCACTCCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGMHSG*IPLHVR
Trigger: TCTTACGTGGAGTGGGATTCAGCCTGAATGCATACC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACGCCTTCCCTTCCACTaGCTTTGCGTTGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERLPFH*LCVGVI
Trigger: TATGACACCAACGCAAAGTCAGTGGAAGGGAAGGCG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGTTGCTGTTGTTGGTaGGCGGTCACAGCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHECCCCW*AVTARS
Trigger: ACTCCGAGCTGTGACCGCGCACCAACAACAGCAACA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297405.10
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATGTGTCCCCAGGCTCTaGTACAATGGTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPECVPRL*YNGPSA
Trigger: TGCACTTGGACCATTGTAGCAGAGCCTGGGGACACA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGTACTTTGTGTATCTaGTGGATGAGGAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGTLCI*WMRREP
Trigger: GGGCTCTCTCCTCATCCAGCAGATACACAAAGTACC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTACTGGGGCACTTGGGTaGCATTGTAAGATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSTGALG*HCKIQA
Trigger: TGCTTGGATCTTACAATGGCACCCAAGTGCCCCAGT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACAGAGGATAGTCCCATaGCCTTCTCTCCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEQRIVP*PSLPCH
Trigger: ATGACAGGGGAGAGAAGGGCATGGGACTATCCTCTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGATTTATTGTCCATGTaGAATCTAAACTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGDLLSM*NLNCWD
Trigger: ATCCCAGCAGTTTAGATTGCACATGGACAATAAATC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGTGCTCCATCCATCTaGAGTCGTTCTCCTAATCTG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGAPSI*SRSPNL
Trigger: CAGATTAGGAGAACGACTGCAGATGGATGGAGCACC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGACTGGCGCATCCCATaGATGATACCCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSDWRIP*MIPIGR
Trigger: TCTTCCTATGGGTATCATGCATGGGATGCGCCAGTC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTACAGCTGTGGGGTATaGATTCAGGCTGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSYSCGV*IQAESH
Trigger: GTGGGATTCAGCCTGAATGCATACCCCACAGCTGTA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAACAAAGCCATCCATTaGCCAATTTTCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNKAIH*PIFFLH
Trigger: ATGAAGGAAGAAAATTGGGCAATGGATGGCTTTGTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACAGGCTCCCAGGGTTTaGATTCCTTTGCTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEQAPRV*IPLLGF
Trigger: AAAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTTGCTGATAATTGGTaGTGGTATATTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVADNW*WYIHSR
Trigger: TCTGGAATGAATATACCACCACCAATTATCAGCAAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCGCCGTGCATTGATTaGTATTCCAGGATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPPCID*YSRIRA
Trigger: TGCCCTGATCCTGGAATACCAATCAATGCACGGCGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTGGGAGCTGAAAAATaGCCACCACATGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELGAEK*PPHGAP
Trigger: TGGAGCCCCATGTGGTGGCCATTTTTCAGCTCCCAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGTCAGGCGTGCCAGTaGTTGGGTAAAACTGCCATT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSQACQ*LGKTAI
Trigger: AATGGCAGTTTTACCCAACCACTGGCACGCCTGACT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTGAGAGTTCAAAACTaGTATACACAAGTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVRVQN*YTQVES
Trigger: GCTTTCAACTTGTGTATACCAGTTTTGAACTCTCAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTGCTACCAGCAAAGTaGCCTTGGTCACTGATCTTG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVLPAK*PWSLIL
Trigger: CAAGATCAGTGACCAAGGCCACTTTGCTGGTAGCAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAATCCGTGTCAAACTaGATGGTTACTATATTGAGG +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKSVSN*MVTILR
Trigger: CCTCAATATAGTAACCATCCAGTTTGACACGGATTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTCATGGGGACCCCTaGGTCACGACACGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIHGDP*VTTRSG
Trigger: GCCACTGCGTGTCGTGACCCAGGGGTCCCCATGAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATACAGACTGGTGGGCTaGGCTGCCAGAAGTACCGAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEYRLVG*AARSTD
Trigger: ATCGGTACTTCTGGCAGCCCAGCCCACCAGTCTGTA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACACATTTGAAGATTTaGGTAACTGTCAGGATATCC +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTHLKI*VTVRIS
Trigger: GGATATCCTGACAGTTACCCAAATCTTCAAATGTGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTGACAGGCAGGGACTaGCGCATCCCATGCATGATA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELTGRD*RIPCMI
Trigger: TATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAACAGGCACACAGGATaGGAGCTGACCAGACCAATT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSNRHTG*ELTRPI
Trigger: AATTGGTCTGGTCAGCTCCCATCCTGTGTGCCTGTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCACTGTGCCTTTGTTaGCCCTTGCATAAGATACCC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSALCLC*PLHKIP
Trigger: GGGTATCTTATGCAAGGGCCAACAAAGGCACAGTGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACACTGTCTGTTGGCCTaGCACTGTGCCTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHCLLA*HCAFVG
Trigger: GCCAACAAAGGCACAGTGCCAGGCCAACAGACAGTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACACATAGGTGGAGGATaGCTCCACTGTCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHIGGG*LHCLLA
Trigger: GGCCAACAGACAGTGGAGCCATCCTCCACCTATGTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCACTTTGCACATAGGTaGAGGATGGCTCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHFAHR*RMAPLS
Trigger: AGACAGTGGAGCCATCCTCCACCTATGTGCAAAGTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTCTTTTAGAATTGGCTaGAATTCCAGGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSFRIG*NSRIRT
Trigger: TGTTCTGATCCTGGAATTCCAGCCAATTCTAAAAGA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTGGCTGTGGTTCCTaGGTTACCACACTGCACAGC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIGCGS*VTTLHS
Trigger: GCTGTGCAGTGTGGTAACCCAGGAACCACAGCCAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGAAGACTTTCCCATTaGCTGTGGTTCCTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGRLSH*LWFLGY
Trigger: GTAACCCAGGAACCACAGCCAATGGGAAAGTCTTCC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCTCAGTCCATTGGCTaGTATACCTGGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSQSIG*YTWVST
Trigger: TGTGGAGACCCAGGTATACCAGCCAATGGACTGAGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACACTTAGCTTTGGGCTaGGTGTTCCCAGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHLALG*VFPVQV
Trigger: GACCTGCACTGGGAACACCCAGCCCAAAGCTAAGTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCTATGCAGGTGAGCTaGGGGTGGCCATCAAGGATG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEAMQVS*GWPSRM
Trigger: CATCCTTGATGGCCACCCTCAGCTCACCTGCATAGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGTTGGGGTCCAGACCTaGATTTCTGAGACTCGTAAC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEVGVQT*ISETRN
Trigger: GTTACGAGTCTCAGAAATTCAGGTCTGGACCCCAAC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAACTTCAGCTATCCGTTaGCAGGTGATGCTCTTTGCG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPETSAIR*QVMLFA
Trigger: CGCAAAGAGCATCACCTGTCAACGGATAGCTGAAGT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTACACACAGGCCTGTaGTCACTCCAAGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLHTGL*SLQAAK
Trigger: TTTTGCTGCTTGGAGTGATCACAGGCCTGTGTGTAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCCTGGCCATCCTGGTaGGAGAATCACTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESWPSW*ENHSTG
Trigger: CCCAGTGGAGTGATTCTCTCACCAGGATGGCCAGGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGAAGGGGCTCTTCATaGCTCAACCTGTATCCTGAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRRGSS*LNLYPE
Trigger: TTCAGGATACAGGTTGAGTCATGAAGAGCCCCTTCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCACCAATCCCAAAGTTaGACCCGATTCGACTACCAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHQSQS*TRFDYH
Trigger: ATGGTAGTCGAATCGGGTTCAACTTTGGGATTGGTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATAACCCGAAGAGCATaGGAAGGTCAGAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEITRRA*EGQSVT
Trigger: GGTGACACTCTGACCTTCTCATGCTCTTCGGGTTAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCACCACCAAGACAGATaGTCTCTGATGTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHHQDR*SLMFLP
Trigger: TGGAAGGAACATCAGAGATCATCTGTCTTGGTGGTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTCAGGGTATCCAGGTaGCAAAATAGTCCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELRVSR*QNSPFA
Trigger: CGCAAAGGGACTATTTTGTCACCTGGATACCCTGAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTACGACTGACTCCGTaGAGGCATGTGAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELRLTP*RHVRAE
Trigger: TTCAGCTCTCACATGCCTTCACGGAGTCAGTCGTAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTGACCGATCTGAGGTaGATTTTGGTCTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELTDLR*ILVWSI
Trigger: GATGGACCAGACCAAAATTCACCTCAGATCGGTCAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCATCACCTGAACAATaGGGTTGTGATCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSASPEQ*GCDPLQ
Trigger: TTGGAGTGGATCACAACCTCATTGTTCAGGTGATGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGTAGGCTCTATGCAGTaGGGTGATGAACCACTCCAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEVGSMQ*GDEPLQ
Trigger: TTGGAGTGGTTCATCACCTCACTGCATAGAGCCTAC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCGAATGTATTGTTCTaGGATCCATGCCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPNVLF*DPCRGT
Trigger: TGTGCCTCGGCATGGATCTCAGAACAATACATTCGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACGCCTTCCCTTCCACTaGCTTTGCGTTGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERLPFH*LCVGVI
Trigger: TATGACACCAACGCAAAGTCAGTGGAAGGGAAGGCG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGGTTTGGATTCCTTTaGTCGGCTTTCCCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGFGFL*SAFPFA
Trigger: CGCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGTCCCCAAACCGCCGTaGATTGATTGGTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEVPKPP*IDWYSR
Trigger: CCTGGAATACCAATCAATGCACGGCGGTTTGGGGAC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAACTGGGGCACTTGGGTaGCATTGTAAGATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPETGALG*HCKIQA
Trigger: TGCTTGGATCTTACAATGGCACCCAAGTGCCCCAGT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATTGATTCCCTTTCCTaGTTGAACCTGAATACTATA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGIDSLS*LNLNTI
Trigger: TATAGTATTCAGGTTCAAGCAGGAAAGGGAATCAAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATTGCCTCCACAGGGTaGTATACAGACTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEIASTG*YTDWWA
Trigger: AGCCCACCAGTCTGTATAGCACCCTGTGGAGGCAAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCCAGTCACAGTCTCTaGTATGCGGATATGGATGAG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSSHSL*YADMDE
Trigger: CTCATCCATATCCGCATAGCAGAGACTGTGACTGGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCATCCCTACGACATTTaGATGAGCAGGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHPYDI*MSRSFW
Trigger: CCAGAAACTCCTGCTCATGCAAATGTCGTAGGGATG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCTGGGTGTTCCCAGTaGAGGTCTAGGATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEAGCSQ*RSRIFH
Trigger: GTGAAAGATCCTAGACCTGCACTGGGAACACCCAGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTAGCAGCTCCATGTTaGTATTGCTCAGTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVAAPC*YCSVLR
Trigger: ACGCAACACTGAGCAATAGCAACATGGAGCTGCTAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTCAGCCCGGCGCAGTaGAGTTGTTGCTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELSPAQ*SCCCCW
Trigger: CCAACAACAGCAACAACTCCACTGCGCCGGGCTGAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297405.10
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCAGGCTCTGCTACAATaGTCCAAGTGCAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSQALLQ*SKCNQH
Trigger: ATGCTGATTGCACTTGGACCATTGTAGCAGAGCCTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCAGTGGAGGTAGTGTaGGTCAATGTAGAAGAACCT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPVEVV*VNVEEP
Trigger: AGGTTCTTCTACATTGACCCACACTACCTCCACTGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAACTTTGTGTATCTGCTaGATGAGGAGAGAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPETLCIC*MRREPV
Trigger: GACGGGCTCTCTCCTCATCCAGCAGATACACAAAGT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTATTACTAGTAAGATaGGAAGGCACCTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLLLVR*EGTSAP
Trigger: TGGGGCTGAGGTGCCTTCCCATCTTACTAGTAATAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTGGGGCTCCACATTTTaGAATCAGTCCACTCCACAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSWGSTF*NQSTPH
Trigger: ATGTGGAGTGGACTGATTCCAAAATGTGGAGCCCCA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGAGAATCACTCCACTaGGAGCTGAAAAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRESLH*ELKNGH
Trigger: GTGGCCATTTTTCAGCTCCCAGTGGAGTGATTCTCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGGCGTGCCAGTGGTTaGGTAAAACTGCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERRASG*VKLPFS
Trigger: AGAGAATGGCAGTTTTACCCAACCACTGGCACGCCT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGTCAGGCGTGCCAGTaGTTGGGTAAAACTGCCATT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESQACQ*LGKTAI
Trigger: AATGGCAGTTTTACCCAACCACTGGCACGCCTGACT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACATATCATTTTCTGGTaGACCGTCCCAGACTCGGAG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHIIFW*TVPDSE
Trigger: CTCCGAGTCTGGGACGGTCCACCAGAAAATGATATG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAGCATATCATTTTCTaGTGGACCGTCCCAGACTCG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKHIIF*WTVPDS
Trigger: CGAGTCTGGGACGGTCCACCAGAAAATGATATGCTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGCTATACAGACTGGTaGGCTGGGCTGCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHECYTDW*AGLPEV
Trigger: TACTTCTGGCAGCCCAGCCCACCAGTCTGTATAGCA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGAGGAAGTCATAGTTTaGTTCTATGCTAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGEEVIV*FYAKTD
Trigger: ATCAGTTTTAGCATAGAACCAAACTATGACTTCCTC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTACTATTCAAAAGATaGGGTATTGTTGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVLFKR*GIVVPE
Trigger: TTCAGGAACAACAATACCCCATCTTTTGAATAGTAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTTCGAAACGGGCGTaGATCAGGACAGCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSISKRA*IRTALQ
Trigger: TTGCAAAGCTGTCCTGATCCACGCCCGTTTCGAAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGAGCACTTGACAAACTaGAGGTGCTCCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEEHLTN*RCSIHL
Trigger: CAGATGGATGGAGCACCTCCAGTTTGTCAAGTGCTC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAAGGAATTGATGCTTaGACATGTAACAACAACACA +
Preference number: 4 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKGIDA*TCNNNT
Trigger: TGTGTTGTTGTTACATGTCCAAGCATCAATTCCTTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCACTGTGCCTTTGTTaGCCCTTGCATAAGATACCC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEALCLC*PLHKIP
Trigger: GGGTATCTTATGCAAGGGCCAACAAAGGCACAGTGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACACTTTGCACATAGGTaGAGGATGGCTCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHFAHR*RMAPLS
Trigger: AGACAGTGGAGCCATCCTCCACCTATGTGCAAAGTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATGGCCGGGAGTACCTaGATCGCCACATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEMAGST*IATCPS
Trigger: ACTGGGACATGTGGCGATCCAGGTACTCCCGGCCAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCCTGTCTAGAGCCATaGCCGGGAGTACCTGGATCG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESCLEP*PGVPGS
Trigger: CGATCCAGGTACTCCCGGCCATGGCTCTAGACAGGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTTTCCCATTGGCTGTaGTTCCTGGGTTACCACACT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELSHWL*FLGYHT
Trigger: AGTGTGGTAACCCAGGAACCACAGCCAATGGGAAAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATGCCGAGGCACACCTaGGTTTTCACAAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEMPRHT*VFTRGL
Trigger: CAAACCTCTTGTGAAAACCCAGGTGTGCCTCGGCAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATGAGCAGGAGTTTCTaGCTGTTTACAGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEMSRSF*LFTAVG
Trigger: CCCCACAGCTGTAAACAGCCAGAAACTCCTGCTCAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTGTATACCCATGAGATaGAAGGTCCATCCCTACGAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSCIPMR*KVHPYD
Trigger: GTCGTAGGGATGGACCTTCCATCTCATGGGTATACA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGTGTATCTGCTGGATaGGGAGAGAGCCCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKECVSAG*GESPSL
Trigger: CAAGGACGGGCTCTCTCCTCATCCAGCAGATACACA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACTTCAGCTATCCGTTaGCAGGTGATGCTCTTTGCG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETSAIR*QVMLFA
Trigger: CGCAAAGAGCATCACCTGTCAACGGATAGCTGAAGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACACTTTCGTCCGTTTaGAGGTGCAGCCACATTTGG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETLSSV*RCSHIW
Trigger: CCAAATGTGGCTGCACCTTCAAACGGACGAAAGTGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCAGGTCAAAGTCATTaGAAGAAAGATGTATCCGGC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPGQSH*KKDVSG
Trigger: GCCGGATACATCTTTCTTTCAATGACTTTGACCTGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTGAGTGGTCAGCCTaGAATTCCAATCGCAGTATG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSIEWSA*NSNRSM
Trigger: CATACTGCGATTGGAATTTCAGGCTGACCACTCAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCACTCCACTGGGAGCTaGAAAATGGCCACCACATGG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEHSTGS*KMATTW
Trigger: CCATGTGGTGGCCATTTTTCAGCTCCCAGTGGAGTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCCTGGCCATCCTGGTaGGAGAATCACTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSWPSW*ENHSTG
Trigger: CCCAGTGGAGTGATTCTCTCACCAGGATGGCCAGGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGATCCAAGCAAGGGTaGCAGAAGATTTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERSKQG*QKIWPI
Trigger: GATGGGCCAAATCTTCTGTCACCCTTGCTTGGATCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGAAGGGGCTCTTCATaGCTCAACCTGTATCCTGAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERRGSS*LNLYPE
Trigger: TTCAGGATACAGGTTGAGTCATGAAGAGCCCCTTCT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGTTGGAGGAAGATCTaGACCAGTCAGGCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKECWRKI*TSQACQ
Trigger: CTGGCACGCCTGACTGGTTCAGATCTTCCTCCAACA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACACCAATCCCAAAGTTaGACCCGATTCGACTACCAT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHQSQS*TRFDYH
Trigger: ATGGTAGTCGAATCGGGTTCAACTTTGGGATTGGTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAACAGAGAAGATTGCTaGGTTGGCCCATCATACACC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPENREDC*VGPSYT
Trigger: GGTGTATGATGGGCCAACTCAGCAATCTTCTCTGTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTCCCTCTGGCACTGTaGTCTTCCACACACAATTCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELPLAL*SSTHNS
Trigger: TGAATTGTGTGTGGAAGATCACAGTGCCAGAGGGAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGGTATTGTTGTTCCTaGATAGCTTCCAAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGYCCS*IASKSW
Trigger: CCAAGACTTGGAAGCTATTCAGGAACAACAATACCC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAGGAAGATGGTATTTaGGGACCACTAAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKEDGI*GPLSRP
Trigger: TGGCCGGCTTAGTGGTCCTCAAATACCATCTTCCTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTCCGTGAAGGCATGTaGGAGCTGAATTTCCAATTA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLREGM*ELNFQL
Trigger: TAATTGGAAATTCAGCTCTCACATGCCTTCACGGAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTACGACTGACTCCGTaGAGGCATGTGAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELRLTP*RHVRAE
Trigger: TTCAGCTCTCACATGCCTTCACGGAGTCAGTCGTAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCACCTTGGAAGTGGATaGTTCCAATTACGACTGACT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHLGSG*FQLRLT
Trigger: AGTCAGTCGTAATTGGAATCATCCACTTCCAAGGTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCAGGACAGAGCACTTaGCAAACTGGAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEAGQST*QTGGAP
Trigger: TGGAGCACCTCCAGTTTGTCAAGTGCTCTGTCCTGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACGAGGGGTCTTGTTATaGTTGCTCCATGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERGVLL*LLHVPS
Trigger: AGATGGAACATGGAGCAATCATAACAAGACCCCTCG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCATCACCTGAACAATaGGGTTGTGATCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEASPEQ*GCDPLQ
Trigger: TTGGAGTGGATCACAACCTCATTGTTCAGGTGATGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTGTGCACTGTCTAACTaGAGGTCCAGAAAGGATGTA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSCALSN*RSRKDV
Trigger: TACATCCTTTCTGGACCTTCAGTTAGACAGTGCACA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGTATGCATTCAGGCTaGATCCCACTCCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGMHSG*IPLHVR
Trigger: TCTTACGTGGAGTGGGATTCAGCCTGAATGCATACC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAACAGATTTGTGGGCGTaGTGTAGCTCAGGACAGTTA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPETDLWA*CSSGQL
Trigger: TAACTGTCCTGAGCTACATCACGCCCACAAATCTGT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGGAGGGTAGCACAATaGACTTGCCCTTTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGRVAQ*TCPLQK
Trigger: TTTCTGCAAAGGGCAAGTTCATTGTGCTACCCTCCC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGCGCAGTGGAGTTGTTaGTGTTGTTGGTGCGCGGTC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNAQWSC*CCWCAV
Trigger: GACCGCGCACCAACAACAGCAACAACTCCACTGCGC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297405.10
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGACCCAGACACATTGTaGATTGCTGTCATACTGGAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSDPDTL*IAVILE
Trigger: TTCCAGTATGACAGCAATGCACAATGTGTCTGGGTC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACTGGGGCACTTGGGTaGCATTGTAAGATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETGALG*HCKIQA
Trigger: TGCTTGGATCTTACAATGGCACCCAAGTGCCCCAGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTGTGGAAGTTGAACTaGACACCTTTTCCATGGGTT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVWKLN*TPFPWV
Trigger: AACCCATGGAAAAGGTGTGCAGTTCAACTTCCACAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCCAGTCACAGTCTCTaGTATGCGGATATGGATGAG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESSHSL*YADMDE
Trigger: CTCATCCATATCCGCATAGCAGAGACTGTGACTGGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTGACAAACTGGAGGTaGTCCATCCATCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELTNWR*SIHLQS
Trigger: CGACTGCAGATGGATGGAGCACCTCCAGTTTGTCAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTCTGCACACAGCACTaGTTTTTCCAACAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSFCTQH*FFQQVG
Trigger: TCCGACTTGTTGGAAAAAGCAGTGCTGTGTGCAGAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGACTGGCGCATCCCATaGATGATACCCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEDWRIP*MIPIGR
Trigger: TCTTCCTATGGGTATCATGCATGGGATGCGCCAGTC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGTTGGCCTGGCACTGTaGCTTTGTTGGCCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEVGLAL*LCWPLH
Trigger: ATGCAAGGGCCAACAAAGGCACAGTGCCAGGCCAAC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGCTTTGCACTCTGGCTaGCTTCCGGTCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNALHSG*LPVQLP
Trigger: TGGCAGTTGGACCGGAAGGCAGCCAGAGTGCAAAGC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCCTGGGTTACCACACTaGACAGCTTTGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEPGLPH*TALHSG
Trigger: GCCAGAGTGCAAAGCTGTGCAGTGTGGTAACCCAGG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACATCCCTACGACATTTaGATGAGCAGGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHPYDI*MSRSFW
Trigger: CCAGAAACTCCTGCTCATGCAAATGTCGTAGGGATG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCTATTGCTCAGTGTTaGGTTAACTCTCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEAIAQC*VNSPSG
Trigger: TCCACTGGGAGAGTTAACGCAACACTGAGCAATAGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGTTGTTGCTGTTGTTaGTGCGCGGTCACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESCCCC*CAVTAR
Trigger: CCGAGCTGTGACCGCGCACCAACAACAGCAACAACT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297405.10
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTTGGTACTTGTCACTaGAGGTGGCAGATGGAATCC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEFGTCH*RWQMES
Trigger: GGATTCCATCTGCCACCTCCAGTGACAAGTACCAAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTGAGAACACAGATTTaGTACTTGTCACTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVRTQI*YLSLEV
Trigger: CACCTCCAGTGACAAGTACCAAATCTGTGTTCTCAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCAGTGGAGGTAGTGTaGGTCAATGTAGAAGAACCT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPVEVV*VNVEEP
Trigger: AGGTTCTTCTACATTGACCCACACTACCTCCACTGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGGTGCAGCCACATTTaGCTACTCATGCTCACTATC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERCSHI*LLMLTI
Trigger: GATAGTGAGCATGAGTAGCCAAATGTGGCTGCACCT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATGTATCCGGCTCCCTaGATCAGAGATTATCGTCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEMYPAP*IRDYRP
Trigger: TGGACGATAATCTCTGATCCAGGGAGCCGGATACAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTATTACTAGTAAGATaGGAAGGCACCTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELLLVR*EGTSAP
Trigger: TGGGGCTGAGGTGCCTTCCCATCTTACTAGTAATAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTGGGAGCTGAAAAATaGCCACCACATGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELGAEK*PPHGAP
Trigger: TGGAGCCCCATGTGGTGGCCATTTTTCAGCTCCCAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGAGAATCACTCCACTaGGAGCTGAAAAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERESLH*ELKNGH
Trigger: GTGGCCATTTTTCAGCTCCCAGTGGAGTGATTCTCT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTACTAAATAGAAACTaGGGCACTTGGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLLNRN*GTWVPL
Trigger: CAATGGCACCCAAGTGCCCCAGTTTCTATTTAGTAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACATATCATTTTCTGGTaGACCGTCCCAGACTCGGAG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHIIFW*TVPDSE
Trigger: CTCCGAGTCTGGGACGGTCCACCAGAAAATGATATG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTCGAGTCCCATTCATaGGGACCCCTGGGTCACGAC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFESHS*GPLGHD
Trigger: GTCGTGACCCAGGGGTCCCCATGAATGGGACTCGAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGAAGATTGCTGAGTTaGCCCATCATACACCTCAAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRRLLS*PIIHLN
Trigger: GTTGAGGTGTATGATGGGCCAACTCAGCAATCTTCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAGGAATCATTCCACTaGGCCAAAGAATTGGGCACT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKESFH*AKELGT
Trigger: AGTGCCCAATTCTTTGGCCCAGTGGAATGATTCCTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCAAAATTTCAGCATTaGGCACAGGTGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSKFQH*AQVVEV
Trigger: AACCTCCACCACCTGTGCCCAATGCTGAAATTTTGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTAGCCGTAATTCATTaGCAGGACAGAGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELAVIH*QDRALD
Trigger: GTCAAGTGCTCTGTCCTGCCAATGAATTACGGCTAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGACCCGCTAGGCATCTaGTTTCAGATTCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEDPLGI*FQIHSK
Trigger: TTTGGAGTGAATCTGAAACCAGATGCCTAGCGGGTC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAACAGGCACACAGGATaGGAGCTGACCAGACCAATT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENRHTG*ELTRPI
Trigger: AATTGGTCTGGTCAGCTCCCATCCTGTGTGCCTGTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACACTTTGCACATAGGTaGAGGATGGCTCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHFAHR*RMAPLS
Trigger: AGACAGTGGAGCCATCCTCCACCTATGTGCAAAGTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCAGGTTCTTGATGACTaGCCTAAAAGGGAACGCTTT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSQVLDD*PKRERF
Trigger: AAAGCGTTCCCTTTTAGGCCAGTCATCAAGAACCTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCAATGGCCATTCAATTaGCAGGTTCTTGATGACTGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSQWPFN*QVLDDW
Trigger: CCAGTCATCAAGAACCTGCCAATTGAATGGCCATTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATGGCCGGGAGTACCTaGATCGCCACATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNMAGST*IATCPS
Trigger: ACTGGGACATGTGGCGATCCAGGTACTCCCGGCCAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTTTCCCATTGGCTGTaGTTCCTGGGTTACCACACT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELSHWL*FLGYHT
Trigger: AGTGTGGTAACCCAGGAACCACAGCCAATGGGAAAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACATATCTCAGTCCATTaGCTGGTATACCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHISVH*LVYLGL
Trigger: GAGACCCAGGTATACCAGCCAATGGACTGAGATATG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCTTCTCTTTTTCCTTaGGCAGGTATACCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPSLFP*AGIPGS
Trigger: TGACCCTGGTATACCTGCCCAAGGAAAAAGAGAAGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATGCCGAGGCACACCTaGGTTTTCACAAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEMPRHT*VFTRGL
Trigger: CAAACCTCTTGTGAAAACCCAGGTGTGCCTCGGCAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATGAGCAGGAGTTTCTaGCTGTTTACAGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEMSRSF*LFTAVG
Trigger: CCCCACAGCTGTAAACAGCCAGAAACTCCTGCTCAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATGTATACCCATGAGATaGAAGGTCCATCCCTACGAC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPECIPMR*KVHPYD
Trigger: GTCGTAGGGATGGACCTTCCATCTCATGGGTATACA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCACTTAGCTTTGGGCTaGGTGTTCCCAGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEHLALG*VFPVQV
Trigger: GACCTGCACTGGGAACACCCAGCCCAAAGCTAAGTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACGAAGCTGTATTAACTaGATTGGCTATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERSCIN*IGYAGE
Trigger: CTCACCTGCATAGCCAATTCAGTTAATACAGCTTCG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTACACACAGGCCTGTaGTCACTCCAAGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELHTGL*SLQAAK
Trigger: TTTTGCTGCTTGGAGTGATCACAGGCCTGTGTGTAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTGAGTGGTCAGCCTaGAATTCCAATCGCAGTATG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIEWSA*NSNRSM
Trigger: CATACTGCGATTGGAATTTCAGGCTGACCACTCAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTGAACTTCCTAATTaGAAGTTGTCCCCAAACCGC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSIELPN*KLSPNR
Trigger: GCGGTTTGGGGACAACTTTCAATTAGGAAGTTCAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGAAAAGTGTGGAAGTTaGACTGCACACCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSEKCGS*TAHLFH
Trigger: ATGGAAAAGGTGTGCAGTTCAACTTCCACACTTTTC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGTTGGAGGAAGATCTaGACCAGTCAGGCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCWRKI*TSQACQ
Trigger: CTGGCACGCCTGACTGGTTCAGATCTTCCTCCAACA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTCGACTACCATATTaGGGAATGCCAGGATCTTCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSIRLPY*GMPGSS
Trigger: TGAAGATCCTGGCATTCCTCAATATGGTAGTCGAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACACCAATCCCAAAGTTaGACCCGATTCGACTACCAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHQSQS*TRFDYH
Trigger: ATGGTAGTCGAATCGGGTTCAACTTTGGGATTGGTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACACCACCAAGACAGATaGTCTCTGATGTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHHQDR*SLMFLP
Trigger: TGGAAGGAACATCAGAGATCATCTGTCTTGGTGGTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGTGGCCTTGGTCACTaGTCTTGTATCCAAATTGTG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESGLGH*SCIQIV
Trigger: CACAATTTGGATACAAGATCAGTGACCAAGGCCACT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCCCTGTCATGCACTTaGGAAGGCTACTTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPLSCT*EGYFRG
Trigger: TCCACGGAAGTAGCCTTCTCAAGTGCATGACAGGGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCGGAGTATATCATGTaGTGCTTCCGTATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSEYIM*CFRIKS
Trigger: GCTTTTGATACGGAAGCATCACATGATATACTCCGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATATCCTGGGTCACATTaGAAAACAACAGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEYPGSH*KTTVSP
Trigger: TGGGGACACTGTTGTTTTTCAATGTGACCCAGGATA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTCTTTCCTCTCCTTaGAGTTCATATCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSILSSP*SSYPGS
Trigger: TGACCCAGGATATGAACTTCAAGGAGAGGAAAGAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGGTAACTTGCTGTCTTaGAAACTTCCAATCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEGNLLS*KLPISG
Trigger: CCCACTGATTGGAAGTTTTCAAGACAGCAAGTTACC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAACAGAGAAGATTGCTaGGTTGGCCCATCATACACC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENREDC*VGPSYT
Trigger: GGTGTATGATGGGCCAACTCAGCAATCTTCTCTGTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTAACAACTTGCACTTaGATGCCAGCTCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELTTCT*MPAPSG
Trigger: GCCAGAGGGAGCTGGCATTCAAGTGCAAGTTGTTAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGGGTATTGTTGTTCCTaGATAGCTTCCAAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEGYCCS*IASKSW
Trigger: CCAAGACTTGGAAGCTATTCAGGAACAACAATACCC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCTGTGTATTCAAGATaGAATCCTGCAGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSAVYSR*NPAAET
Trigger: TGTTTCTGCTGCAGGATTTCATCTTGAATACACAGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATAGCACCACCACACTaGGCTAAACAAATTGGGATT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSIAPPH*AKQIGI
Trigger: AATCCCAATTTGTTTAGCTCAGTGTGGTGGTGCTAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAACAGTACTAGTTTCTaGGGATCCACTTCGTACTTC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSNSTSF*GSTSYF
Trigger: GAAGTACGAAGTGGATCCTCAGAAACTAGTACTGTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAGCGGTATTGCCACTaGACTGACCGATCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKRYCH*TDRSEV
Trigger: CACCTCAGATCGGTCAGTTCAGTGGCAATACCGCTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATAACCCTTTTCCACTaGAATGCTCCATGCACACAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSITLFH*NAPCTH
Trigger: ATGTGTGCATGGAGCATTTCAGTGGAAAAGGGTTAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTGCCATGATCTGCTaGCCACTGAAGAAATACTTC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSIAMIC*PLKKYF
Trigger: GAAGTATTTCTTCAGTGGTCAGCAGATCATGGCAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCTCCATGTTCCATCTaGTTGGCATACAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEAPCSI*LAYSCS
Trigger: ACTACAGCTGTATGCCAATCAGATGGAACATGGAGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAACCAGGGTCACAGCTaGAAACTACTTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSNQGHS*KLLWFC
Trigger: ACAAAACCAAAGTAGTTTTCAGCTGTGACCCTGGTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGTGAGGAAACATACTaGAGCTACTATCACATTTGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGEETY*SYYHIW
Trigger: CCAAATGTGATAGTAGCTTCAGTATGTTTCCTCACC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGGCACTCTGTCTCATaGTACAAAAAGTCAAGACTG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRHSVS*YKKSRL
Trigger: CAGTCTTGACTTTTTGTATCATGAGACAGAGTGCCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGTGTCCCCAGGCTCTaGTACAATGGTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKECVPRL*YNGPSA
Trigger: TGCACTTGGACCATTGTAGCAGAGCCTGGGGACACA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGTGGTAGTCCTGTTATaGTCCTCTAACTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEVVVLL*SSNSPV
Trigger: CACTGGTGAGTTAGAGGAGCATAACAGGACTACCAC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCATCACAAGAGAACTaGACAGTTGATCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSSQEN*TVDPRL
Trigger: TAGCCTTGGATCAACTGTGCAGTTCTCTTGTGATGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGACACATTGTGCATTaGTGTCATACTGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRHIVH*CHTGTE
Trigger: TTCCGTTCCAGTATGACAGCAATGCACAATGTGTCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGCCATGTACAGGTATaGCAGGGTCCAAACAAGAAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGHVQV*QGPNKN
Trigger: ATTCTTGTTTGGACCCTGGCATACCTGTACATGGCC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCTCAATCATCCACATaGAACGCAGGTTATTGTCAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPQSST*NAGYCH
Trigger: ATGACAATAACCTGCGTTGCATGTGGATGATTGAGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACTGGTGGGCTGGGCTaGCAGAAGTACCGATTTTCT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKETGGLG*QKYRFS
Trigger: AGAAAATCGGTACTTCTGGCAGCCCAGCCCACCAGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAGATCCTGTTAAATTaGCTCCACAGGGTGCTATAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKILLN*LHRVLY
Trigger: GTATAGCACCCTGTGGAGGCAATTTAACAGGATCTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGAGATAACATAGTCTaGATTGACGGTGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGDNIV*IDGDSP
Trigger: TGGACTATCACCGTCAATGCAGACTATGTTATCTCC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTGGTGATAGAACAGTaGCTTCTGAACCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLVIEQ*LLNLLN
Trigger: GTTCAACAGGTTCAGAAGGCACTGTTCTATCACCAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTCGTTCTCCTAATCTaGACGTCAGAATTGCATTAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVVLLI*TSELHY
Trigger: GTAATGCAATTCTGACGTGCAGATTAGGAGAACGAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCCTTTGTTGGCCCTTaGATAAGATACCCAATATTG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSAFVGP*IRYPIL
Trigger: CAATATTGGGTATCTTATGCAAGGGCCAACAAAGGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAACTTTGGTAAGCACTaGGGTACTTCACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENFGKH*GTSPLQ
Trigger: CTGGAGTGGTGAAGTACCGCAGTGCTTACCAAAGTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAACTCCAAGTGCCATCTaGTTGACATATTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPETPSAI*LTYSGA
Trigger: AGCACCAGAATATGTCAAGCAGATGGCACTTGGAGT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATGAACCACTCCAAGTaGCATCTGCTTGACATATTC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSMNHSK*HLLDIF
Trigger: GAATATGTCAAGCAGATGGCACTTGGAGTGGTTCAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCTATTGCTCAGTGTTaGGTTAACTCTCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEAIAQC*VNSPSG
Trigger: TCCACTGGGAGAGTTAACGCAACACTGAGCAATAGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGTAGCAGCTCCATGTTaGTATTGCTCAGTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEVAAPC*YCSVLR
Trigger: ACGCAACACTGAGCAATAGCAACATGGAGCTGCTAC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTCGTTATACCATTGTaGAAACCGTGTTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLVIPL*KPCSSW
Trigger: CCAACTTGAACACGGTTTGCACAATGGTATAACGAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGAAGAAGGCAAAGGTTaGCTCGTTATACCATTGTGC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEEEGKG*LVIPLC
Trigger: GCACAATGGTATAACGAGGCAACCTTTGCCTTCTTC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCAGGCTCCCAGGGTTTaGATTCCTTTGCTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEQAPRV*IPLLGF
Trigger: AAAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACTGGAGGTGGCAGATaGAATCCTGTTAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETGGGR*NPVNLV
Trigger: GACAAGGTTAACAGGATTCCATCTGCCACCTCCAGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTTGGTACTTGTCACTaGAGGTGGCAGATGGAATCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEFGTCH*RWQMES
Trigger: GGATTCCATCTGCCACCTCCAGTGACAAGTACCAAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACAGGCTCTGCTACAATaGTCCAAGTGCAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEQALLQ*SKCNQH
Trigger: ATGCTGATTGCACTTGGACCATTGTAGCAGAGCCTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCTCACTATCAAGTCTaGTACAAAGCTTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEAHYQV*YKASSQ
Trigger: CTGACTGGAAGCTTTGTACCAGACTTGATAGTGAGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGGTGCAGCCACATTTaGCTACTCATGCTCACTATC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERCSHI*LLMLTI
Trigger: GATAGTGAGCATGAGTAGCCAAATGTGGCTGCACCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAAGGTTCCAAGAATTaGGGATTCTGGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKGSKN*GFWRVT
Trigger: GGTGACTCTCCAGAATCCCCAATTCTTGGAACCTTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTATTACTAGTAAGATaGGAAGGCACCTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELLLVR*EGTSAP
Trigger: TGGGGCTGAGGTGCCTTCCCATCTTACTAGTAATAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAAATGGCCACCACATaGGGCTCCACATTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKMATT*GSTFWN
Trigger: ATTCCAAAATGTGGAGCCCCATGTGGTGGCCATTTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTGCACACCTTTTCCATaGGTTACATCAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSCTPFP*VTSTVH
Trigger: ATGGACTGTTGATGTAACCCATGGAAAAGGTGTGCA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCAGCAAAGTGGCCTTaGTCACTGATCTTGTATCCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPAKWP*SLILYP
Trigger: TGGATACAAGATCAGTGACCAAGGCCACTTTGCTGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAGCATATCATTTTCTaGTGGACCGTCCCAGACTCG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKHIIF*WTVPDS
Trigger: CGAGTCTGGGACGGTCCACCAGAAAATGATATGCTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGTCACGACACGCAGTaGCAACAGAACTTGAAAACT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGHDTQ*QQNLKT
Trigger: AGTTTTCAAGTTCTGTTGCCACTGCGTGTCGTGACC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAAACTTCCAATCAGTaGGCTATTACTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKTSNQ*AITVWS
Trigger: GGACCAGACAGTAATAGCCCACTGATTGGAAGTTTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGGGCGCATGACAACTTaGCAAGGCTCTATTCCATCC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEGRMTT*QGSIPS
Trigger: GGATGGAATAGAGCCTTGCCAAGTTGTCATGCGCCC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGTGATTCTCCTGAATaGGATCCTGAGAGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESDSPE*DPERED
Trigger: ATCTTCCCTCTCAGGATCCCATTCAGGAGAATCACT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCTTCTTCCGAATCTTaGTTCAGGCACAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESSSES*FRHRTA
Trigger: TGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGGAATCATTCCACTaGGCCAAAGAATTGGGCACT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKESFH*AKELGT
Trigger: AGTGCCCAATTCTTTGGCCCAGTGGAATGATTCCTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATAGCTTCCAAGTCTTaGAGCATTGTTGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEIASKS*SIVVSP
Trigger: GGGGGAGACAACAATGCTCCAAGACTTGGAAGCTAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCAAAATTTCAGCATTaGGCACAGGTGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESKFQH*AQVVEV
Trigger: AACCTCCACCACCTGTGCCCAATGCTGAAATTTTGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCATGTTCCATCTGATTaGCATACAGCTGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHVPSD*HTAVVS
Trigger: ACTCACTACAGCTGTATGCCAATCAGATGGAACATG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGACCCGCTAGGCATCTaGTTTCAGATTCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEDPLGI*FQIHSK
Trigger: TTTGGAGTGAATCTGAAACCAGATGCCTAGCGGGTC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTCACAATCAGTTCTaGAATTCCACAATGACCCGC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSIHNQF*NSTMTR
Trigger: GCGGGTCATTGTGGAATTCCAGAACTGATTGTGAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCACTGTCTGTTGGCCTaGCACTGTGCCTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNHCLLA*HCAFVG
Trigger: GCCAACAAAGGCACAGTGCCAGGCCAACAGACAGTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACAATGGCCATTCAATTaGCAGGTTCTTGATGACTGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEQWPFN*QVLDDW
Trigger: CCAGTCATCAAGAACCTGCCAATTGAATGGCCATTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCACAGCTTTGCACTCTaGCTGCCTTCCGGTCCAACT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNHSFAL*LPSGPT
Trigger: AGTTGGACCGGAAGGCAGCCAGAGTGCAAAGCTGTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTGGCTGTGGTTCCTaGGTTACCACACTGCACAGC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIGCGS*VTTLHS
Trigger: GCTGTGCAGTGTGGTAACCCAGGAACCACAGCCAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTGGCTGGTATACCTaGGTCTCCACAACTGATTAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSIGWYT*VSTTDY
Trigger: ATAATCAGTTGTGGAGACCCAGGTATACCAGCCAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACATATCTCAGTCCATTaGCTGGTATACCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHISVH*LVYLGL
Trigger: GAGACCCAGGTATACCAGCCAATGGACTGAGATATG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTCCATCGTGTAGCCTaGCTGGCACATGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEFHRVA*LAHVRN
Trigger: GTTTCTTACATGTGCCAGCCAGGCTACACGATGGAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAACAGCTCTACAAGTTaGCATTACTCCACTCCATGT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSNSSTS*HYSTPC
Trigger: ACATGGAGTGGAGTAATGCCAACTTGTAGAGCTGTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGATCTGGGGAGGAGTTaGGCAGGTAACAGCTCTACA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEDLGRS*AGNSST
Trigger: TGTAGAGCTGTTACCTGCCCAACTCCTCCCCAGATC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAACCAGCTTCACAAATaGGAACTTTTCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPENQLHK*ELFQSR
Trigger: CCTGGACTGGAAAAGTTCCCATTTGTGAAGCTGGTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTAGGCGAGCTTCCTaGCTTTTATATACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSIRRAS*LLYTPE
Trigger: TTCAGGGGTATATAAAAGCCAGGAAGCTCGCCTAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCCAAGGCTAAAATCTaGTCCGATTCTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESKAKI*SDSLPI
Trigger: AATGGGAAGAGAATCGGATCAGATTTTAGCCTTGGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTATCCGTTGACAGGTaGTGCTCTTTGCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLSVDR*CSLRPV
Trigger: TACAGGGCGCAAAGAGCATCACCTGTCAACGGATAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACACTTTCGTCCGTTTaGAGGTGCAGCCACATTTGG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKETLSSV*RCSHIW
Trigger: CCAAATGTGGCTGCACCTTCAAACGGACGAAAGTGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCAGGTCAAAGTCATTaGAAGAAAGATGTATCCGGC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPGQSH*KKDVSG
Trigger: GCCGGATACATCTTTCTTTCAATGACTTTGACCTGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCCAATCGCAGTATGTaGCTATTACTAGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSNRSM*LLLVRW
Trigger: CCATCTTACTAGTAATAGTCACATACTGCGATTGGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCAAACCGCCGTGCATTaGTTGGTATTCCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEQTAVH*LVFQDQ
Trigger: CTGATCCTGGAATACCAATCAATGCACGGCGGTTTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTGAACTTCCTAATTaGAAGTTGTCCCCAAACCGC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIELPN*KLSPNR
Trigger: GCGGTTTGGGGACAACTTTCAATTAGGAAGTTCAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGAAAAGTGTGGAAGTTaGACTGCACACCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEEKCGS*TAHLFH
Trigger: ATGGAAAAGGTGTGCAGTTCAACTTCCACACTTTTC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACATAGAGACCAGCATTaGTTGTTGGAGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHRDQH*LLEEDL
Trigger: CAGATCTTCCTCCAACAATCAATGCTGGTCTCTATG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAACGCAATTGAGCCCTaGAATTTCCATAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENAIEP*NFHRDQ
Trigger: CTGGTCTCTATGGAAATTTCAGGGCTCAATTGCGTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTCGACTACCATATTaGGGAATGCCAGGATCTTCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIRLPY*GMPGSS
Trigger: TGAAGATCCTGGCATTCCTCAATATGGTAGTCGAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATAACCCGAAGAGCATaGGAAGGTCAGAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEITRRA*EGQSVT
Trigger: GGTGACACTCTGACCTTCTCATGCTCTTCGGGTTAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGACAGATGATCTCTaGTGTTCCTTCCAGTCGATA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKTDDL*CSFQSI
Trigger: TATCGACTGGAAGGAACATCAGAGATCATCTGTCTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGGATCTTCACAGTGTaGGAGTTCAAAACTGGTATA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRIFTV*EFKTGI
Trigger: TATACCAGTTTTGAACTCTCACACTGTGAAGATCCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGTGGCCTTGGTCACTaGTCTTGTATCCAAATTGTG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESGLGH*SCIQIV
Trigger: CACAATTTGGATACAAGATCAGTGACCAAGGCCACT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGATTGCATCCATAAATaGTGGTGCTACCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEDCIHK*WCYQQS
Trigger: ACTTTGCTGGTAGCACCATCATTTATGGATGCAATC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGTGGCAACAGAACTTaGAAACTGAATTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSGNRT*KLNCKS
Trigger: GGATTTGCAATTCAGTTTTCAAGTTCTGTTGCCACT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTCTTTCCTCTCCTTaGAGTTCATATCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEILSSP*SSYPGS
Trigger: TGACCCAGGATATGAACTTCAAGGAGAGGAAAGAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTCAGGGTATCCAGGTaGCAAAATAGTCCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELRVSR*QNSPFA
Trigger: CGCAAAGGGACTATTTTGTCACCTGGATACCCTGAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTCCCTCTGGCACTGTaGTCTTCCACACACAATTCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELPLAL*SSTHNS
Trigger: TGAATTGTGTGTGGAAGATCACAGTGCCAGAGGGAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTAACAACTTGCACTTaGATGCCAGCTCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLTTCT*MPAPSG
Trigger: GCCAGAGGGAGCTGGCATTCAAGTGCAAGTTGTTAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGGTATTGTTGTTCCTaGATAGCTTCCAAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGYCCS*IASKSW
Trigger: CCAAGACTTGGAAGCTATTCAGGAACAACAATACCC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCTGTGTATTCAAGATaGAATCCTGCAGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEAVYSR*NPAAET
Trigger: TGTTTCTGCTGCAGGATTTCATCTTGAATACACAGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTTCATGGGTGGTGCTaGATAAGGAAGATGGTATTT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSFHGWC*IRKMVF
Trigger: AAATACCATCTTCCTTATTCAGCACCACCCATGAAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTGGGAAACATTCAAATaGAATGGTTTGACCCACAGT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSWETFK*NGLTHS
Trigger: ACTGTGGGTCAAACCATTTCATTTGAATGTTTCCCA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTCCGTGAAGGCATGTaGGAGCTGAATTTCCAATTA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELREGM*ELNFQL
Trigger: TAATTGGAAATTCAGCTCTCACATGCCTTCACGGAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACACCTTGGAAGTGGATaGTTCCAATTACGACTGACT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHLGSG*FQLRLT
Trigger: AGTCAGTCGTAATTGGAATCATCCACTTCCAAGGTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAGCGGTATTGCCACTaGACTGACCGATCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKRYCH*TDRSEV
Trigger: CACCTCAGATCGGTCAGTTCAGTGGCAATACCGCTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGTCCATCATACACCTaGAGAACATCAAATTCCTTT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGPSYT*RTSNSF
Trigger: AAAGGAATTTGATGTTCTTCAGGTGTATGATGGACC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTGCCATGATCTGCTaGCCACTGAAGAAATACTTC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIAMIC*PLKKYF
Trigger: GAAGTATTTCTTCAGTGGTCAGCAGATCATGGCAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTGATAATATATCCATaGGGTGGGGATTCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELIIYP*GGDSGV
Trigger: TACACCAGAATCCCCACCTCATGGATATATTATCAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCTGGAATTCCACAATaGCCCGCTAGGCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESGIPQ*PARHLV
Trigger: AACCAGATGCCTAGCGGGTCATTGTGGAATTCCAGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTCCACAGTCAATCATaGTACATTCTGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVHSQS*YILVKV
Trigger: AACCTTTACCAGAATGTATCATGATTGACTGTGGAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGTGCACTGTCTAACTaGAGGTCCAGAAAGGATGTA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHECALSN*RSRKDV
Trigger: TACATCCTTTCTGGACCTTCAGTTAGACAGTGCACA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGGAAAATTGCAGCTaGATGAAACCTCTGACTGGT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKENCS*MKPLTG
Trigger: ACCAGTCAGAGGTTTCATTCAGCTGCAATTTTCCTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTTGTTTCCTTCCTTTaGAATTGTAAGAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVVSFL*NCKSLS
Trigger: GGAAAGGCTCTTACAATTTCAAAGGAAGGAAACAAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAAGCAAATAAACTGTaGGTAAGCACTCTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKANKL*VSTLRV
Trigger: CACTCTGAGAGTGCTTACTCACAGTTTATTTGCTTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATACCCCATAGCTCACTaGATAATACTGGTTACTCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEYPIAH*IILVTP
Trigger: TGGAGTAACCAGTATTATTCAGTGAGCTATGGGGTA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGGTGAGGAAACATACTaGAGCTACTATCACATTTGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEGEETY*SYYHIW
Trigger: CCAAATGTGATAGTAGCTTCAGTATGTTTCCTCACC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCTGGCATTACTGTATaGTACAGTTTAAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSAGITV*YSLNEP
Trigger: TGGCTCATTTAAACTGTATCATACAGTAATGCCAGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTACAATGGTCCAAGTaGAATCAGCATTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLQWSK*NQHCYG
Trigger: ACCATAACAATGCTGATTGCACTTGGACCATTGTAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAACTGTTCCCATTGGTaGAGTAAAGTTAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPENCSHW*SKVRQA
Trigger: TGCCTGTCTAACTTTACTGCACCAATGGGAACAGTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTCCCCAAACCGCCGTaGATTGATTGGTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVPKPP*IDWYSR
Trigger: CCTGGAATACCAATCAATGCACGGCGGTTTGGGGAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACTGGGGCACTTGGGTaGCATTGTAAGATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKETGALG*HCKIQA
Trigger: TGCTTGGATCTTACAATGGCACCCAAGTGCCCCAGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGTGTGGAAGTTGAACTaGACACCTTTTCCATGGGTT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEVWKLN*TPFPWV
Trigger: AACCCATGGAAAAGGTGTGCAGTTCAACTTCCACAC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTATTCGTTGCAGATaGACCACATTCAGCCACACA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIIRCR*TTFSHT
Trigger: TGTGTGGCTGAATGTGGTGCATCTGCAACGAATAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCAGAGGATAGTCCCATaGCCTTCTCTCCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNQRIVP*PSLPCH
Trigger: ATGACAGGGGAGAGAAGGGCATGGGACTATCCTCTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACACTGGTGGGCTGGGCTaGCAGAAGTACCGATTTTCT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNTGGLG*QKYRFS
Trigger: AGAAAATCGGTACTTCTGGCAGCCCAGCCCACCAGT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTGCCTCCACAGGGTaGTATACAGACTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIASTG*YTDWWA
Trigger: AGCCCACCAGTCTGTATAGCACCCTGTGGAGGCAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGGAGATAACATAGTCTaGATTGACGGTGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEGDNIV*IDGDSP
Trigger: TGGACTATCACCGTCAATGCAGACTATGTTATCTCC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTCCGAAAAGCCAAATaGATTGTATTTGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLRKAK*IVFELL
Trigger: AAGCAGCTCAAATACAATGCATTTGGCTTTTCGGAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTGGTGATAGAACAGTaGCTTCTGAACCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELVIEQ*LLNLLN
Trigger: GTTCAACAGGTTCAGAAGGCACTGTTCTATCACCAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGGTGCTCCATCCATCTaGAGTCGTTCTCCTAATCTG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEGAPSI*SRSPNL
Trigger: CAGATTAGGAGAACGACTGCAGATGGATGGAGCACC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTGACAAACTGGAGGTaGTCCATCCATCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELTNWR*SIHLQS
Trigger: CGACTGCAGATGGATGGAGCACCTCCAGTTTGTCAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCTTTTCCACTGAAATaGTCCATGCACACATTTGAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPFPLK*SMHTFE
Trigger: TTCAAATGTGTGCATGGAGCATTTCAGTGGAAAAGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGGTCTTGTTATGATTaGTCCATGTTCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGSCYD*SMFHLI
Trigger: AATCAGATGGAACATGGAGCAATCATAACAAGACCC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACTCCAAGTGCCATCTaGTTGACATATTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETPSAI*LTYSGA
Trigger: AGCACCAGAATATGTCAAGCAGATGGCACTTGGAGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATGAACCACTCCAAGTaGCATCTGCTTGACATATTC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEMNHSK*HLLDIF
Trigger: GAATATGTCAAGCAGATGGCACTTGGAGTGGTTCAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTACAGCTGTGGGGTATaGATTCAGGCTGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEYSCGV*IQAESH
Trigger: GTGGGATTCAGCCTGAATGCATACCCCACAGCTGTA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTCGTTATACCATTGTaGAAACCGTGTTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELVIPL*KPCSSW
Trigger: CCAACTTGAACACGGTTTGCACAATGGTATAACGAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGAAGAAGGCAAAGGTTaGCTCGTTATACCATTGTGC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEEEGKG*LVIPLC
Trigger: GCACAATGGTATAACGAGGCAACCTTTGCCTTCTTC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACTTTGTGTATCTGCTaGATGAGGAGAGAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKETLCIC*MRREPV
Trigger: GACGGGCTCTCTCCTCATCCAGCAGATACACAAAGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCATTGCTGTCATACTaGAACGGAAAGTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEALLSY*NGKLGD
Trigger: ATCTCCCAACTTTCCGTTCCAGTATGACAGCAATGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCTCACTATCAAGTCTaGTACAAAGCTTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEAHYQV*YKASSQ
Trigger: CTGACTGGAAGCTTTGTACCAGACTTGATAGTGAGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGGGAAAGATACAGATaGGTATGTTTGCAGACCATT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRERYR*VCLQTI
Trigger: AATGGTCTGCAAACATACCCATCTGTATCTTTCCCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTTCCATACCCTTCTaGGTAATCAGGAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSISIPF*VIRRKN
Trigger: GTTCTTTCTCCTGATTACCCAGAAGGGTATGGAAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAAGGTTCCAAGAATTaGGGATTCTGGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKGSKN*GFWRVT
Trigger: GGTGACTCTCCAGAATCCCCAATTCTTGGAACCTTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTACTAAATAGAAACTaGGGCACTTGGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELLNRN*GTWVPL
Trigger: CAATGGCACCCAAGTGCCCCAGTTTCTATTTAGTAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATGCACACCTTTTCCATaGGTTACATCAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPECTPFP*VTSTVH
Trigger: ATGGACTGTTGATGTAACCCATGGAAAAGGTGTGCA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGGCGTGCCAGTGGTTaGGTAAAACTGCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERRASG*VKLPFS
Trigger: AGAGAATGGCAGTTTTACCCAACCACTGGCACGCCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGTGGAGAGTGTAGCCTaGATTGCATCCATAAATGAT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEVESVA*IASIND
Trigger: ATCATTTATGGATGCAATCCAGGCTACACTCTCCAC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGCTATACAGACTGGTaGGCTGGGCTGCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCYTDW*AGLPEV
Trigger: TACTTCTGGCAGCCCAGCCCACCAGTCTGTATAGCA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAAACTTCCAATCAGTaGGCTATTACTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKTSNQ*AITVWS
Trigger: GGACCAGACAGTAATAGCCCACTGATTGGAAGTTTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTATTCATTATATTGCCTaGATCAAAGCAGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSIHYIA*IKAGLS
Trigger: CGAGAGTCCTGCTTTGATCCAGGCAATATAATGAAT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGGCGCATGACAACTTaGCAAGGCTCTATTCCATCC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGRMTT*QGSIPS
Trigger: GGATGGAATAGAGCCTTGCCAAGTTGTCATGCGCCC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTACCTCAACAACATCGTaGAGTGATGTCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSTSTTS*SDVWKN
Trigger: ATTTTTCCAGACATCACTCCACGATGTTGTTGAGGT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCTTCTTCCGAATCTTaGTTCAGGCACAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESSSES*FRHRTA
Trigger: TGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAGGAATCATTCCACTaGGCCAAAGAATTGGGCACT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKESFH*AKELGT
Trigger: AGTGCCCAATTCTTTGGCCCAGTGGAATGATTCCTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTATAAGCTGGTTTCATaGGTGGTGCTGAATAAGGAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSYKLVS*VVLNKE
Trigger: TTCCTTATTCAGCACCACCCATGAAACCAGCTTATA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTCACACCTTGGAAGTaGATGATTCCAATTACGACT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSFTPWK*MIPITT
Trigger: AGTCGTAATTGGAATCATCCACTTCCAAGGTGTGAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCAAAATTTCAGCATTaGGCACAGGTGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESKFQH*AQVVEV
Trigger: AACCTCCACCACCTGTGCCCAATGCTGAAATTTTGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGAGCACTTGACAAACTaGAGGTGCTCCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEEHLTN*RCSIHL
Trigger: CAGATGGATGGAGCACCTCCAGTTTGTCAAGTGCTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATGAGGTGGGGATTCTaGTGTACTACAGTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEMRWGF*CTTVES
Trigger: GCTTTCTACTGTAGTACACCAGAATCCCCACCTCAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTATTCCTCCATTTGTTaGAGCTTTAGGAATCCCACA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSYSSIC*SFRNPT
Trigger: TGTGGGATTCCTAAAGCTCCAACAAATGGAGGAATA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTCACAATCAGTTCTaGAATTCCACAATGACCCGC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIHNQF*NSTMTR
Trigger: GCGGGTCATTGTGGAATTCCAGAACTGATTGTGAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAACAGGCACACAGGATaGGAGCTGACCAGACCAATT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENRHTG*ELTRPI
Trigger: AATTGGTCTGGTCAGCTCCCATCCTGTGTGCCTGTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATGTTCTTCCATAAATTaGACTACCAGGGTGACCACA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPECSSIN*TTRVTT
Trigger: TGTGGTCACCCTGGTAGTCCAATTTATGGAAGAACA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCACTGTGCCTTTGTTaGCCCTTGCATAAGATACCC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEALCLC*PLHKIP
Trigger: GGGTATCTTATGCAAGGGCCAACAAAGGCACAGTGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACAGGTTCTTGATGACTaGCCTAAAAGGGAACGCTTT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEQVLDD*PKRERF
Trigger: AAAGCGTTCCCTTTTAGGCCAGTCATCAAGAACCTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTGGCTGTGGTTCCTaGGTTACCACACTGCACAGC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIGCGS*VTTLHS
Trigger: GCTGTGCAGTGTGGTAACCCAGGAACCACAGCCAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTTTCCCATTGGCTGTaGTTCCTGGGTTACCACACT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELSHWL*FLGYHT
Trigger: AGTGTGGTAACCCAGGAACCACAGCCAATGGGAAAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCTCAGTCCATTGGCTaGTATACCTGGGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESQSIG*YTWVST
Trigger: TGTGGAGACCCAGGTATACCAGCCAATGGACTGAGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGATCTGGGGAGGAGTTaGGCAGGTAACAGCTCTACA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNDLGRS*AGNSST
Trigger: TGTAGAGCTGTTACCTGCCCAACTCCTCCCCAGATC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAACCAGCTTCACAAATaGGAACTTTTCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENQLHK*ELFQSR
Trigger: CCTGGACTGGAAAAGTTCCCATTTGTGAAGCTGGTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCACTGACTTTGCGTTaGTGTCATACATGGGATTTT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPLTLR*CHTWDF
Trigger: AAAATCCCATGTATGACACCAACGCAAAGTCAGTGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAACCGTGTTCAAGTTaGGATCAAATCGTACCGCCT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKPCSS*DQIVPP
Trigger: AGGCGGTACGATTTGATCCCAACTTGAACACGGTTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAATCCACGGTATCGATaGTTGCTGTCTGTAACAAAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPENPRYR*LLSVTK
Trigger: TTTTGTTACAGACAGCAATCATCGATACCGTGGATT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCCAAGGCTAAAATCTaGTCCGATTCTCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESKAKI*SDSLPI
Trigger: AATGGGAAGAGAATCGGATCAGATTTTAGCCTTGGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACACTTCAGCTATCCGTTaGCAGGTGATGCTCTTTGCG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNTSAIR*QVMLFA
Trigger: CGCAAAGAGCATCACCTGTCAACGGATAGCTGAAGT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTACACACAGGCCTGTaGTCACTCCAAGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELHTGL*SLQAAK
Trigger: TTTTGCTGCTTGGAGTGATCACAGGCCTGTGTGTAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCAAACCGCCGTGCATTaGTTGGTATTCCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNQTAVH*LVFQDQ
Trigger: CTGATCCTGGAATACCAATCAATGCACGGCGGTTTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGATCCAAGCAAGGGTaGCAGAAGATTTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRSKQG*QKIWPI
Trigger: GATGGGCCAAATCTTCTGTCACCCTTGCTTGGATCT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGAAGGGGCTCTTCATaGCTCAACCTGTATCCTGAA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERRGSS*LNLYPE
Trigger: TTCAGGATACAGGTTGAGTCATGAAGAGCCCCTTCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATAACCCGAAGAGCATaGGAAGGTCAGAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNITRRA*EGQSVT
Trigger: GGTGACACTCTGACCTTCTCATGCTCTTCGGGTTAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAGACAGATGATCTCTaGTGTTCCTTCCAGTCGATA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKTDDL*CSFQSI
Trigger: TATCGACTGGAAGGAACATCAGAGATCATCTGTCTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCACCACCAAGACAGATaGTCTCTGATGTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEHHQDR*SLMFLP
Trigger: TGGAAGGAACATCAGAGATCATCTGTCTTGGTGGTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCGGAGTATATCATGTaGTGCTTCCGTATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESEYIM*CFRIKS
Trigger: GCTTTTGATACGGAAGCATCACATGATATACTCCGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATTCTTTCCTCTCCTTaGAGTTCATATCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEILSSP*SSYPGS
Trigger: TGACCCAGGATATGAACTTCAAGGAGAGGAAAGAAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCAAATGCATTGTATTTaGGCTGCTTTCTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSQMHCI*AAFYSL
Trigger: GAGAGAATAGAAAGCAGCTCAAATACAATGCATTTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTCAGGGTATCCAGGTaGCAAAATAGTCCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLRVSR*QNSPFA
Trigger: CGCAAAGGGACTATTTTGTCACCTGGATACCCTGAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTCCCTCTGGCACTGTaGTCTTCCACACACAATTCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLPLAL*SSTHNS
Trigger: TGAATTGTGTGTGGAAGATCACAGTGCCAGAGGGAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTGCAGCAGAAACACTaGTGTCTGATTGAAAATTTA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLQQKH*CLIENL
Trigger: TAAATTTTCAATCAGACATCAGTGTTTCTGCTGCAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCTGTGTATTCAAGATaGAATCCTGCAGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEAVYSR*NPAAET
Trigger: TGTTTCTGCTGCAGGATTTCATCTTGAATACACAGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATAGCACCACCACACTaGGCTAAACAAATTGGGATT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEIAPPH*AKQIGI
Trigger: AATCCCAATTTGTTTAGCTCAGTGTGGTGGTGCTAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAGGAAGATGGTATTTaGGGACCACTAAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKEDGI*GPLSRP
Trigger: TGGCCGGCTTAGTGGTCCTCAAATACCATCTTCCTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTGACCGATCTGAGGTaGATTTTGGTCTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLTDLR*ILVWSI
Trigger: GATGGACCAGACCAAAATTCACCTCAGATCGGTCAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAATCCTGGAAGACACTaGTACCTAATAATATCACCT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSNPGRH*YLIISP
Trigger: AGGTGATATTATTAGGTATCAGTGTCTTCCAGGATT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATAACCCTTTTCCACTaGAATGCTCCATGCACACAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEITLFH*NAPCTH
Trigger: ATGTGTGCATGGAGCATTTCAGTGGAAAAGGGTTAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTATATTAAAAGCAGATaGATAATCCCCACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSYIKSR*IIPTEG
Trigger: TCCCTCAGTGGGGATTATTCATCTGCTTTTAATATA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGTGAGTTCTTTGGATaGCAATCGATATCCATCATT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSEFFG*QSISII
Trigger: AATGATGGATATCGATTGTCATCCAAAGAACTCACT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCTCCATGTTCCATCTaGTTGGCATACAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEAPCSI*LAYSCS
Trigger: ACTACAGCTGTATGCCAATCAGATGGAACATGGAGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAACCAGGGTCACAGCTaGAAACTACTTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENQGHS*KLLWFC
Trigger: ACAAAACCAAAGTAGTTTTCAGCTGTGACCCTGGTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGAGCCATATGAAGTTTaGGTTCCAATCTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSEPYEV*VPILFP
Trigger: TGGAAATAAGATTGGAACTCAAACTTCATATGGCTC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCTGGAATTCCACAATaGCCCGCTAGGCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSGIPQ*PARHLV
Trigger: AACCAGATGCCTAGCGGGTCATTGTGGAATTCCAGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTTTCTCCAATGACTTaGCCATTCACAATCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSFSPMT*PFTISS
Trigger: AGAACTGATTGTGAATGGTCAAGTCATTGGAGAAAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTGACATATCCTCACTaGAGAACCAATCAATCGAAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLTYPH*RTNQSK
Trigger: TTTCGATTGATTGGTTCTTCAGTGAGGATATGTCAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCAGGAATAAATGACTaGACTAGAAAATGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEAGIND*TRKCCA
Trigger: GGCACAACATTTTCTAGTTCAGTCATTTATTCCTGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTAGGCTCTATGCAGTaGGGTGATGAACCACTCCAA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVGSMQ*GDEPLQ
Trigger: TTGGAGTGGTTCATCACCTCACTGCATAGAGCCTAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCGAATGTATTGTTCTaGGATCCATGCCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPNVLF*DPCRGT
Trigger: TGTGCCTCGGCATGGATCTCAGAACAATACATTCGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTACAACACTTCCTACTTaGAATCCGAATGTATTGTTC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSTTLPT*NPNVLF
Trigger: GAACAATACATTCGGATTTCAAGTAGGAAGTGTTGT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATCAGTGTATACCCATaGGATGGAAGGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEISVYP*DGRSIP
Trigger: AGGGATGGACCTTCCATCTCATGGGTATACACTGAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGTTGTTTCCTTCCTTTaGAATTGTAAGAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEVVSFL*NCKSLS
Trigger: GGAAAGGCTCTTACAATTTCAAAGGAAGGAAACAAC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATACCCCATAGCTCACTaGATAATACTGGTTACTCCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEYPIAH*IILVTP
Trigger: TGGAGTAACCAGTATTATTCAGTGAGCTATGGGGTA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGTGAGGAAACATACTaGAGCTACTATCACATTTGG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGEETY*SYYHIW
Trigger: CCAAATGTGATAGTAGCTTCAGTATGTTTCCTCACC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGGCACTCTGTCTCATaGTACAAAAAGTCAAGACTG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERHSVS*YKKSRL
Trigger: CAGTCTTGACTTTTTGTATCATGAGACAGAGTGCCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCCATGAGCACTAACTaGAAAATCACTGGTCAAACG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESMSTN*KITGQT
Trigger: CGTTTGACCAGTGATTTTGCAGTTAGTGCTCATGGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTACAATGGTCCAAGTaGAATCAGCATTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELQWSK*NQHCYG
Trigger: ACCATAACAATGCTGATTGCACTTGGACCATTGTAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGACACATTGTGCATTaGTGTCATACTGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERHIVH*CHTGTE
Trigger: TTCCGTTCCAGTATGACAGCAATGCACAATGTGTCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAACATTTGGCTACTCATaGTCACTATCAAGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPETFGYS*SLSSLV
Trigger: TACCAGACTTGATAGTGAGCATGAGTAGCCAAATGT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAACAGATGGGTATGTTTaGAGACCATTGGTTATTCTC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPETDGYV*RPLVIL
Trigger: GAGAATAACCAATGGTCTGCAAACATACCCATCTGT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATTATTCGTTGCAGATaGACCACATTCAGCCACACA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEIIRCR*TTFSHT
Trigger: TGTGTGGCTGAATGTGGTGCATCTGCAACGAATAAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGATTTTCTACCTGAATaGAGGTTATTCTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSDFLPE*RLFFPL
Trigger: GAGAGGAAAGAATAACCTGCATTCAGGTAGAAAATC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAGATCCTGTTAAATTaGCTCCACAGGGTGCTATAC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKILLN*LHRVLY
Trigger: GTATAGCACCCTGTGGAGGCAATTTAACAGGATCTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCCAGTCACAGTCTCTaGTATGCGGATATGGATGAG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESSHSL*YADMDE
Trigger: CTCATCCATATCCGCATAGCAGAGACTGTGACTGGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGAGATAACATAGTCTaGATTGACGGTGATAGTCCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGDNIV*IDGDSP
Trigger: TGGACTATCACCGTCAATGCAGACTATGTTATCTCC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTCTCTCTGGTAACTTaGTGTCTTGAAAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSFSLVT*CLENFQ
Trigger: TTGGAAGTTTTCAAGACAGCAAGTTACCAGAGAGAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCATTGTATTTGAGCTaGTTTCTATTCTCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSALYLS*FLFSLV
Trigger: TACCAGAGAGAATAGAAAGCAGCTCAAATACAATGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTCCGAAAAGCCAAATaGATTGTATTTGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELRKAK*IVFELL
Trigger: AAGCAGCTCAAATACAATGCATTTGGCTTTTCGGAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTCAAGATGAAATCCTaGAGCAGAAACACTGATGTC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEFKMKS*SRNTDV
Trigger: GACATCAGTGTTTCTGCTGCAGGATTTCATCTTGAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGGGTCTTGTTATGATTaGTCCATGTTCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEGSCYD*SMFHLI
Trigger: AATCAGATGGAACATGGAGCAATCATAACAAGACCC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCCTTTGTTGGCCCTTaGATAAGATACCCAATATTG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEAFVGP*IRYPIL
Trigger: CAATATTGGGTATCTTATGCAAGGGCCAACAAAGGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAACTTTGGTAAGCACTaGGGTACTTCACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENFGKH*GTSPLQ
Trigger: CTGGAGTGGTGAAGTACCGCAGTGCTTACCAAAGTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGTAGCAGCTCCATGTTaGTATTGCTCAGTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEVAAPC*YCSVLR
Trigger: ACGCAACACTGAGCAATAGCAACATGGAGCTGCTAC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAATGAACTTGCCCTTTaGAGAAACTATGACAACCAG +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPENELAL*RNYDNQ
Trigger: CTGGTTGTCATAGTTTCTGCAAAGGGCAAGTTCATT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCAGTTTGCACCATTTaGATATCCATATGGAAAACC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEAVCTI*ISIWKT
Trigger: GGTTTTCCATATGGATATCCAAATGGTGCAAACTGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACTGGAGGTGGCAGATaGAATCCTGTTAACCTTGTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKETGGGR*NPVNLV
Trigger: GACAAGGTTAACAGGATTCCATCTGCCACCTCCAGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTTGGTACTTGTCACTaGAGGTGGCAGATGGAATCC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEFGTCH*RWQMES
Trigger: GGATTCCATCTGCCACCTCCAGTGACAAGTACCAAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACATATAATACACCTTTaGGTGGAACACCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHIIHL*VEHQDF
Trigger: GAAATCCTGGTGTTCCACCCAAAGGTGTATTATATG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCAGGCTCTGCTACAATaGTCCAAGTGCAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEQALLQ*SKCNQH
Trigger: ATGCTGATTGCACTTGGACCATTGTAGCAGAGCCTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTTGCTGATAATTGGTaGTGGTATATTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVADNW*WYIHSR
Trigger: TCTGGAATGAATATACCACCACCAATTATCAGCAAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGTAAAGGTACCACTTaGTCCTTGAAGATTAGAGCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHECKGTT*SLKIRA
Trigger: GGCTCTAATCTTCAAGGACCAAGTGGTACCTTTACA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTTCCAGTCAGCACTTaGAGCACTGTCCTAGGATCT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLPVST*STVLGS
Trigger: AGATCCTAGGACAGTGCTCCAAGTGCTGACTGGAAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGGGAAAGATACAGATaGGTATGTTTGCAGACCATT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERERYR*VCLQTI
Trigger: AATGGTCTGCAAACATACCCATCTGTATCTTTCCCT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTTCCATACCCTTCTaGGTAATCAGGAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEISIPF*VIRRKN
Trigger: GTTCTTTCTCCTGATTACCCAGAAGGGTATGGAAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCAAGGAAATCAAACTaGGATTCCAGGTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEARKSN*DSRSKS
Trigger: TGACTTTGACCTGGAATCCCAGTTTGATTTCCTTGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGAATTGGGGATTCTaGAGAGTCACCATCTTTAAC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKNWGF*RVTIFN
Trigger: GTTAAAGATGGTGACTCTCCAGAATCCCCAATTCTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGGGGCTCCACATTTTaGAATCAGTCCACTCCACAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEWGSTF*NQSTPH
Trigger: ATGTGGAGTGGACTGATTCCAAAATGTGGAGCCCCA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGAGAATCACTCCACTaGGAGCTGAAAAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERESLH*ELKNGH
Trigger: GTGGCCATTTTTCAGCTCCCAGTGGAGTGATTCTCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGGCGTGCCAGTGGTTaGGTAAAACTGCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRRASG*VKLPFS
Trigger: AGAGAATGGCAGTTTTACCCAACCACTGGCACGCCT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGTCAGGCGTGCCAGTaGTTGGGTAAAACTGCCATT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSQACQ*LGKTAI
Trigger: AATGGCAGTTTTACCCAACCACTGGCACGCCTGACT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTTGAGTGGATAATTTaGAGACAGCAAAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVEWII*RQQNSF
Trigger: GAAGGAATTTTGCTGTCTCCAAATTATCCACTCAAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCATATCATTTTCTGGTaGACCGTCCCAGACTCGGAG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNHIIFW*TVPDSE
Trigger: CTCCGAGTCTGGGACGGTCCACCAGAAAATGATATG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAGCATATCATTTTCTaGTGGACCGTCCCAGACTCG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKHIIF*WTVPDS
Trigger: CGAGTCTGGGACGGTCCACCAGAAAATGATATGCTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAATCCGTGTCAAACTaGATGGTTACTATATTGAGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKSVSN*MVTILR
Trigger: CCTCAATATAGTAACCATCCAGTTTGACACGGATTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAAACTTCCAATCAGTaGGCTATTACTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKTSNQ*AITVWS
Trigger: GGACCAGACAGTAATAGCCCACTGATTGGAAGTTTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCTTCTTACAGGTCCTaGCATACATGTAATGTGAGA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESSYRS*HTCNVR
Trigger: TCTCACATTACATGTATGCCAGGACCTGTAAGAAGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGCAATCTAAACTGCTaGGATAGTTTCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHECNLNC*DSFQET
Trigger: GGTTTCCTGGAAACTATCCCAGCAGTTTAGATTGCA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTACACCAAAACCTATaGGTAGATTTATTGTCCATG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVHQNL*VDLLSM
Trigger: CATGGACAATAAATCTACCCATAGGTTTTGGTGTAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATATAAGCTGGTTTCATaGGTGGTGCTGAATAAGGAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEYKLVS*VVLNKE
Trigger: TTCCTTATTCAGCACCACCCATGAAACCAGCTTATA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGAGCTTCACACCTTaGAAGTGGATGATTCCAATT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKSFTP*KWMIPI
Trigger: AATTGGAATCATCCACTTCCAAGGTGTGAAGCTCTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTACACATTTGAAGATTTaGGTAACTGTCAGGATATCC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSTHLKI*VTVRIS
Trigger: GGATATCCTGACAGTTACCCAAATCTTCAAATGTGT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAATATATCCATGAGGTaGGGATTCTGGTGTACTACA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPENISMR*GFWCTT
Trigger: TGTAGTACACCAGAATCCCCACCTCATGGATATATT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATATTCCTCCATTTGTTaGAGCTTTAGGAATCCCACA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEYSSIC*SFRNPT
Trigger: TGTGGGATTCCTAAAGCTCCAACAAATGGAGGAATA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACATGTTCCATCTGATTaGCATACAGCTGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHVPSD*HTAVVS
Trigger: ACTCACTACAGCTGTATGCCAATCAGATGGAACATG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAACAGGCACACAGGATaGGAGCTGACCAGACCAATT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNRHTG*ELTRPI
Trigger: AATTGGTCTGGTCAGCTCCCATCCTGTGTGCCTGTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGTTCTTCCATAAATTaGACTACCAGGGTGACCACA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHECSSIN*TTRVTT
Trigger: TGTGGTCACCCTGGTAGTCCAATTTATGGAAGAACA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCTTTTAGAATTGGCTaGAATTCCAGGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSFRIG*NSRIRT
Trigger: TGTTCTGATCCTGGAATTCCAGCCAATTCTAAAAGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGAAGACTTTCCCATTaGCTGTGGTTCCTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGRLSH*LWFLGY
Trigger: GTAACCCAGGAACCACAGCCAATGGGAAAGTCTTCC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCATATCTCAGTCCATTaGCTGGTATACCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEHISVH*LVYLGL
Trigger: GAGACCCAGGTATACCAGCCAATGGACTGAGATATG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTCCATCGTGTAGCCTaGCTGGCACATGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEFHRVA*LAHVRN
Trigger: GTTTCTTACATGTGCCAGCCAGGCTACACGATGGAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAACAGCTCTACAAGTTaGCATTACTCCACTCCATGT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENSSTS*HYSTPC
Trigger: ACATGGAGTGGAGTAATGCCAACTTGTAGAGCTGTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCCTTCTCTTTTTCCTTaGGCAGGTATACCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEPSLFP*AGIPGS
Trigger: TGACCCTGGTATACCTGCCCAAGGAAAAAGAGAAGG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATGAGCAGGAGTTTCTaGCTGTTTACAGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNMSRSF*LFTAVG
Trigger: CCCCACAGCTGTAAACAGCCAGAAACTCCTGCTCAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGTATACCCATGAGATaGAAGGTCCATCCCTACGAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKECIPMR*KVHPYD
Trigger: GTCGTAGGGATGGACCTTCCATCTCATGGGTATACA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATTAGGCGAGCTTCCTaGCTTTTATATACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEIRRAS*LLYTPE
Trigger: TTCAGGGGTATATAAAAGCCAGGAAGCTCGCCTAAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACGTTGGTGTCATACATaGGATTTTCAAAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERWCHT*DFQKLL
Trigger: AAGCAGCTTTTGAAAATCCCATGTATGACACCAACG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCACTGACTTTGCGTTaGTGTCATACATGGGATTTT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPLTLR*CHTWDF
Trigger: AAAATCCCATGTATGACACCAACGCAAAGTCAGTGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACAGCCAAATGGTTTTTaGGTGAGGAAACATACTGAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEQPNGF*VRKHTE
Trigger: TTCAGTATGTTTCCTCACCCAAAAACCATTTGGCTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTTCTGCCAGCCAAATaGTTTTTGGGTGAGGAAACA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEFLPAK*FLGEET
Trigger: TGTTTCCTCACCCAAAAACCATTTGGCTGGCAGAAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCCAATCGCAGTATGTaGCTATTACTAGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESNRSM*LLLVRW
Trigger: CCATCTTACTAGTAATAGTCACATACTGCGATTGGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTGAGTGGTCAGCCTaGAATTCCAATCGCAGTATG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIEWSA*NSNRSM
Trigger: CATACTGCGATTGGAATTTCAGGCTGACCACTCAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCATAGAGACCAGCATTaGTTGTTGGAGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEHRDQH*LLEEDL
Trigger: CAGATCTTCCTCCAACAATCAATGCTGGTCTCTATG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATGAAATGTTCTGGCTaGAATATTGATTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEMKCSG*NIDSLS
Trigger: GGAAAGGGAATCAATATTTCAGCCAGAACATTTCAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCTCCTTGTGCTAAATaGAATGTTCTGGCTGAAATA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESPCAK*NVLAEI
Trigger: TATTTCAGCCAGAACATTTCATTTAGCACAAGGAGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAAGCACCTAGTAGATaGGTCGTTTTATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKAPSR*VVLSFP
Trigger: TGGAAAAGATAAAACGACTCATCTACTAGGTGCTTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGGATCTTCACAGTGTaGGAGTTCAAAACTGGTATA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERIFTV*EFKTGI
Trigger: TATACCAGTTTTGAACTCTCACACTGTGAAGATCCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGTGGCAACAGAACTTaGAAACTGAATTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESGNRT*KLNCKS
Trigger: GGATTTGCAATTCAGTTTTCAAGTTCTGTTGCCACT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTATCCTGGGTCACATTaGAAAACAACAGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEYPGSH*KTTVSP
Trigger: TGGGGACACTGTTGTTTTTCAATGTGACCCAGGATA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTATGCGGATATGGATaGGGGAAGTTTGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELCGYG*GKFGER
Trigger: TCTTTCACCAAACTTCCCTCATCCATATCCGCATAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGGTAACTTGCTGTCTTaGAAACTTCCAATCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEGNLLS*KLPISG
Trigger: CCCACTGATTGGAAGTTTTCAAGACAGCAAGTTACC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACAAATGCATTGTATTTaGGCTGCTTTCTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEQMHCI*AAFYSL
Trigger: GAGAGAATAGAAAGCAGCTCAAATACAATGCATTTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACATCACAGTAATAGGTaGCTGTTGACCCTAATTTAT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHHSNR*LLTLIY
Trigger: ATAAATTAGGGTCAACAGTCACCTATTACTGTGATG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAACAGAGAAGATTGCTaGGTTGGCCCATCATACACC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNREDC*VGPSYT
Trigger: GGTGTATGATGGGCCAACTCAGCAATCTTCTCTGTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGGGAAACATTCAAATaGAATGGTTTGACCCACAGT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEWETFK*NGLTHS
Trigger: ACTGTGGGTCAAACCATTTCATTTGAATGTTTCCCA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGTCCATCATACACCTaGAGAACATCAAATTCCTTT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGPSYT*RTSNSF
Trigger: AAAGGAATTTGATGTTCTTCAGGTGTATGATGGACC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATAAGCACTGGACTTTaGATATTTGGTCCATCATAC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEISTGL*IFGPSY
Trigger: GTATGATGGACCAAATATTCAAAGTCCAGTGCTTAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCGAGGGGTCTTGTTATaGTTGCTCCATGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRGVLL*LLHVPS
Trigger: AGATGGAACATGGAGCAATCATAACAAGACCCCTCG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTTTCTCCAATGACTTaGCCATTCACAATCAGTTCT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEFSPMT*PFTISS
Trigger: AGAACTGATTGTGAATGGTCAAGTCATTGGAGAAAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTGACATATCCTCACTaGAGAACCAATCAATCGAAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELTYPH*RTNQSK
Trigger: TTTCGATTGATTGGTTCTTCAGTGAGGATATGTCAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGTCCACAGTCAATCATaGTACATTCTGGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEVHSQS*YILVKV
Trigger: AACCTTTACCAGAATGTATCATGATTGACTGTGGAC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCAGGAATAAATGACTaGACTAGAAAATGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEAGIND*TRKCCA
Trigger: GGCACAACATTTTCTAGTTCAGTCATTTATTCCTGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGTGCACTGTCTAACTaGAGGTCCAGAAAGGATGTA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKECALSN*RSRKDV
Trigger: TACATCCTTTCTGGACCTTCAGTTAGACAGTGCACA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATCAGTGTATACCCATaGGATGGAAGGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNISVYP*DGRSIP
Trigger: AGGGATGGACCTTCCATCTCATGGGTATACACTGAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGTTGTTTCCTTCCTTTaGAATTGTAAGAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEVVSFL*NCKSLS
Trigger: GGAAAGGCTCTTACAATTTCAAAGGAAGGAAACAAC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAAGCAAATAAACTGTaGGTAAGCACTCTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKANKL*VSTLRV
Trigger: CACTCTGAGAGTGCTTACTCACAGTTTATTTGCTTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTATTATTACCCATGTaGAGTTTGCACCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELLLPM*SLHHLD
Trigger: ATCCAAATGGTGCAAACTGCACATGGGTAATAATAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGATACAGTAACATCTaGAGGTGTGCTAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGYSNI*RCASNS
Trigger: GCTGTTGCTAGCACACCTGCAGATGTTACTGTATCC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGACCCAGACACATTGTaGATTGCTGTCATACTGGAA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEDPDTL*IAVILE
Trigger: TTCCAGTATGACAGCAATGCACAATGTGTCTGGGTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACAGATGGGTATGTTTaGAGACCATTGGTTATTCTC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETDGYV*RPLVIL
Trigger: GAGAATAACCAATGGTCTGCAAACATACCCATCTGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGCCATGTACAGGTATaGCAGGGTCCAAACAAGAAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGHVQV*QGPNKN
Trigger: ATTCTTGTTTGGACCCTGGCATACCTGTACATGGCC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGTGTGGAAGTTGAACTaGACACCTTTTCCATGGGTT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEVWKLN*TPFPWV
Trigger: AACCCATGGAAAAGGTGTGCAGTTCAACTTCCACAC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCATTGTATTTGAGCTaGTTTCTATTCTCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEALYLS*FLFSLV
Trigger: TACCAGAGAGAATAGAAAGCAGCTCAAATACAATGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTCCGAAAAGCCAAATaGATTGTATTTGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELRKAK*IVFELL
Trigger: AAGCAGCTCAAATACAATGCATTTGGCTTTTCGGAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACGACTGCAAATTCATTaGCAATTCTTCTTCCGAATC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERLQIH*QFFFRI
Trigger: GATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTCAAGATGAAATCCTaGAGCAGAAACACTGATGTC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEFKMKS*SRNTDV
Trigger: GACATCAGTGTTTCTGCTGCAGGATTTCATCTTGAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGAATCCAAACCAATTaGTGTGTATTCAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGIQTN*CVFKMK
Trigger: TTTCATCTTGAATACACAGCAATTGGTTTGGATTCC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAATGGTGCCATTCATTaGAGTTATATTCCCACCACA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENGAIH*SYIPTT
Trigger: TGTGGTGGGAATATAACTGCAATGAATGGCACCATT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCTTTTCCACTGAAATaGTCCATGCACACATTTGAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPFPLK*SMHTFE
Trigger: TTCAAATGTGTGCATGGAGCATTTCAGTGGAAAAGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTCTGCACACAGCACTaGTTTTTCCAACAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEFCTQH*FFQQVG
Trigger: TCCGACTTGTTGGAAAAAGCAGTGCTGTGTGCAGAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGGTCTTGTTATGATTaGTCCATGTTCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGSCYD*SMFHLI
Trigger: AATCAGATGGAACATGGAGCAATCATAACAAGACCC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAACTTTGGTAAGCACTaGGGTACTTCACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNFGKH*GTSPLQ
Trigger: CTGGAGTGGTGAAGTACCGCAGTGCTTACCAAAGTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACTCCAAGTGCCATCTaGTTGACATATTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKETPSAI*LTYSGA
Trigger: AGCACCAGAATATGTCAAGCAGATGGCACTTGGAGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCATCCCTACGACATTTaGATGAGCAGGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNHPYDI*MSRSFW
Trigger: CCAGAAACTCCTGCTCATGCAAATGTCGTAGGGATG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTAGCAGCTCCATGTTaGTATTGCTCAGTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVAAPC*YCSVLR
Trigger: ACGCAACACTGAGCAATAGCAACATGGAGCTGCTAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAATGAACTTGCCCTTTaGAGAAACTATGACAACCAG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENELAL*RNYDNQ
Trigger: CTGGTTGTCATAGTTTCTGCAAAGGGCAAGTTCATT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTTCTAGATAATTTCTaGCAGCCAAATGGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSFLDNF*QPNGFW
Trigger: CCAAAAACCATTTGGCTGGCAGAAATTATCTAGAAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGTGAGAACACAGATTTaGTACTTGTCACTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEVRTQI*YLSLEV
Trigger: CACCTCCAGTGACAAGTACCAAATCTGTGTTCTCAC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGTCTTGGTCTTCTCCTaGTACTTTGTGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEVLVFS*YFVYLL
Trigger: CAGCAGATACACAAAGTACCAGGAGAAGACCAAGAC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCATTGCTGTCATACTaGAACGGAAAGTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEALLSY*NGKLGD
Trigger: ATCTCCCAACTTTCCGTTCCAGTATGACAGCAATGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCTCACTATCAAGTCTaGTACAAAGCTTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEAHYQV*YKASSQ
Trigger: CTGACTGGAAGCTTTGTACCAGACTTGATAGTGAGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATTTCCATACCCTTCTaGGTAATCAGGAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEISIPF*VIRRKN
Trigger: GTTCTTTCTCCTGATTACCCAGAAGGGTATGGAAAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATGTATCCGGCTCCCTaGATCAGAGATTATCGTCCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNMYPAP*IRDYRP
Trigger: TGGACGATAATCTCTGATCCAGGGAGCCGGATACAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAGAATTGGGGATTCTaGAGAGTCACCATCTTTAAC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKNWGF*RVTIFN
Trigger: GTTAAAGATGGTGACTCTCCAGAATCCCCAATTCTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGGGGCTCCACATTTTaGAATCAGTCCACTCCACAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNWGSTF*NQSTPH
Trigger: ATGTGGAGTGGACTGATTCCAAAATGTGGAGCCCCA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAAATGGCCACCACATaGGGCTCCACATTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKMATT*GSTFWN
Trigger: ATTCCAAAATGTGGAGCCCCATGTGGTGGCCATTTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGAGAATCACTCCACTaGGAGCTGAAAAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRESLH*ELKNGH
Trigger: GTGGCCATTTTTCAGCTCCCAGTGGAGTGATTCTCT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATCACAGGTTGGAAGTaGATGACTCCACCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNITGWK*MTPPVV
Trigger: AACCACTGGTGGAGTCATCCACTTCCAACCTGTGAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGTGAGAGTTCAAAACTaGTATACACAAGTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEVRVQN*YTQVES
Trigger: GCTTTCAACTTGTGTATACCAGTTTTGAACTCTCAC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCAGCAAAGTGGCCTTaGTCACTGATCTTGTATCCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPAKWP*SLILYP
Trigger: TGGATACAAGATCAGTGACCAAGGCCACTTTGCTGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACAGGTTATTGTCATATaGAAAAGGATAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEQVIVI*KRIARR
Trigger: TCTCCTGGCTATCCTTTTCCATATGACAATAACCTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGTCACGACACGCAGTaGCAACAGAACTTGAAAACT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGHDTQ*QQNLKT
Trigger: AGTTTTCAAGTTCTGTTGCCACTGCGTGTCGTGACC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGAGGAAGTCATAGTTTaGTTCTATGCTAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSEEVIV*FYAKTD
Trigger: ATCAGTTTTAGCATAGAACCAAACTATGACTTCCTC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGGGCTATTACTGTCTaGTCCATCATAGATATAGAG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEWAITV*SIIDIE
Trigger: CTCTATATCTATGATGGACCAGACAGTAATAGCCCA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATTCATTATATTGCCTaGATCAAAGCAGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEIHYIA*IKAGLS
Trigger: CGAGAGTCCTGCTTTGATCCAGGCAATATAATGAAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACCTCAACAACATCGTaGAGTGATGTCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETSTTS*SDVWKN
Trigger: ATTTTTCCAGACATCACTCCACGATGTTGTTGAGGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGAAGATTGCTGAGTTaGCCCATCATACACCTCAAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERRLLS*PIIHLN
Trigger: GTTGAGGTGTATGATGGGCCAACTCAGCAATCTTCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCTTCTTCCGAATCTTaGTTCAGGCACAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESSSES*FRHRTA
Trigger: TGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATAGCTTCCAAGTCTTaGAGCATTGTTGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIASKS*SIVVSP
Trigger: GGGGGAGACAACAATGCTCCAAGACTTGGAAGCTAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTTCGAAACGGGCGTaGATCAGGACAGCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNISKRA*IRTALQ
Trigger: TTGCAAAGCTGTCCTGATCCACGCCCGTTTCGAAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAGAGCTTCACACCTTaGAAGTGGATGATTCCAATT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKSFTP*KWMIPI
Trigger: AATTGGAATCATCCACTTCCAAGGTGTGAAGCTCTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTAGCCGTAATTCATTaGCAGGACAGAGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLAVIH*QDRALD
Trigger: GTCAAGTGCTCTGTCCTGCCAATGAATTACGGCTAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATGAGGTGGGGATTCTaGTGTACTACAGTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEMRWGF*CTTVES
Trigger: GCTTTCTACTGTAGTACACCAGAATCCCCACCTCAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAATATATCCATGAGGTaGGGATTCTGGTGTACTACA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENISMR*GFWCTT
Trigger: TGTAGTACACCAGAATCCCCACCTCATGGATATATT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCTTTTAGAATTGGCTaGAATTCCAGGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESFRIG*NSRIRT
Trigger: TGTTCTGATCCTGGAATTCCAGCCAATTCTAAAAGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCAGGTTCTTGATGACTaGCCTAAAAGGGAACGCTTT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEQVLDD*PKRERF
Trigger: AAAGCGTTCCCTTTTAGGCCAGTCATCAAGAACCTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCAATGGCCATTCAATTaGCAGGTTCTTGATGACTGG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEQWPFN*QVLDDW
Trigger: CCAGTCATCAAGAACCTGCCAATTGAATGGCCATTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGTGATCCACTCCAATaGCCATTCAATTGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKECDPLQ*PFNWQV
Trigger: AACCTGCCAATTGAATGGCCATTGGAGTGGATCACA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAATGAAACCTCTGACTaGTATATAAAGCTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSNETSD*YIKLLP
Trigger: AGGCAAAAGCTTTATATACCAGTCAGAGGTTTCATT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTGCTTGACATATTCTaGTGCTTGATCCCACTAATA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELLDIF*CLIPLI
Trigger: TATTAGTGGGATCAAGCACCAGAATATGTCAAGCAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACGTTGGTGTCATACATaGGATTTTCAAAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERWCHT*DFQKLL
Trigger: AAGCAGCTTTTGAAAATCCCATGTATGACACCAACG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAACCGTGTTCAAGTTaGGATCAAATCGTACCGCCT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKPCSS*DQIVPP
Trigger: AGGCGGTACGATTTGATCCCAACTTGAACACGGTTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACAGCCAAATGGTTTTTaGGTGAGGAAACATACTGAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEQPNGF*VRKHTE
Trigger: TTCAGTATGTTTCCTCACCCAAAAACCATTTGGCTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAACAGCAAACTCCTTTaGAACTGCTATAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSNSKLL*NCYRIN
Trigger: GTTTATTCTATAGCAGTTCCAAAGGAGTTTGCTGTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339701.7
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCGAAGCTGTATTAACTaGATTGGCTATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRSCIN*IGYAGE
Trigger: CTCACCTGCATAGCCAATTCAGTTAATACAGCTTCG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATCAGTAAATATGAGTaGAATTGTGTCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEISKYE*NCVPRL
Trigger: GAGCCTGGGGACACAATTTCACTCATATTTACTGAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCAGGTCAAAGTCATTaGAAGAAAGATGTATCCGGC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPGQSH*KKDVSG
Trigger: GCCGGATACATCTTTCTTTCAATGACTTTGACCTGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTGAACTTCCTAATTaGAAGTTGTCCCCAAACCGC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIELPN*KLSPNR
Trigger: GCGGTTTGGGGACAACTTTCAATTAGGAAGTTCAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAACGCAATTGAGCCCTaGAATTTCCATAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNAIEP*NFHRDQ
Trigger: CTGGTCTCTATGGAAATTTCAGGGCTCAATTGCGTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTCGACTACCATATTaGGGAATGCCAGGATCTTCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIRLPY*GMPGSS
Trigger: TGAAGATCCTGGCATTCCTCAATATGGTAGTCGAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATGAAATGTTCTGGCTaGAATATTGATTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEMKCSG*NIDSLS
Trigger: GGAAAGGGAATCAATATTTCAGCCAGAACATTTCAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCTCCTTGTGCTAAATaGAATGTTCTGGCTGAAATA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESPCAK*NVLAEI
Trigger: TATTTCAGCCAGAACATTTCATTTAGCACAAGGAGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGATTGCATCCATAAATaGTGGTGCTACCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEDCIHK*WCYQQS
Trigger: ACTTTGCTGGTAGCACCATCATTTATGGATGCAATC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCGGAGTATATCATGTaGTGCTTCCGTATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESEYIM*CFRIKS
Trigger: GCTTTTGATACGGAAGCATCACATGATATACTCCGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATATTGAGGGTGCTATaGATTCCTTCAGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEILRVL*IPSGIR
Trigger: TCTTATTCCTGAAGGAATTCATAGCACCCTCAATAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTCTTTCCTCTCCTTaGAGTTCATATCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEILSSP*SSYPGS
Trigger: TGACCCAGGATATGAACTTCAAGGAGAGGAAAGAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTATGCGGATATGGATaGGGGAAGTTTGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLCGYG*GKFGER
Trigger: TCTTTCACCAAACTTCCCTCATCCATATCCGCATAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACATCACAGTAATAGGTaGCTGTTGACCCTAATTTAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHHSNR*LLTLIY
Trigger: ATAAATTAGGGTCAACAGTCACCTATTACTGTGATG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATCAAAAAGAACCGATaGACCGACTGCAAATTCATT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEIKKNR*TDCKFI
Trigger: AATGAATTTGCAGTCGGTTCATCGGTTCTTTTTGAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTGCAGCAGAAACACTaGTGTCTGATTGAAAATTTA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELQQKH*CLIENL
Trigger: TAAATTTTCAATCAGACATCAGTGTTTCTGCTGCAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCTGTGTATTCAAGATaGAATCCTGCAGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEAVYSR*NPAAET
Trigger: TGTTTCTGCTGCAGGATTTCATCTTGAATACACAGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAACAGTACTAGTTTCTaGGGATCCACTTCGTACTTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENSTSF*GSTSYF
Trigger: GAAGTACGAAGTGGATCCTCAGAAACTAGTACTGTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAATCCTGGAAGACACTaGTACCTAATAATATCACCT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENPGRH*YLIISP
Trigger: AGGTGATATTATTAGGTATCAGTGTCTTCCAGGATT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATAACCCTTTTCCACTaGAATGCTCCATGCACACAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEITLFH*NAPCTH
Trigger: ATGTGTGCATGGAGCATTTCAGTGGAAAAGGGTTAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTGCCATGATCTGCTaGCCACTGAAGAAATACTTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIAMIC*PLKKYF
Trigger: GAAGTATTTCTTCAGTGGTCAGCAGATCATGGCAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTGATAATATATCCATaGGGTGGGGATTCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELIIYP*GGDSGV
Trigger: TACACCAGAATCCCCACCTCATGGATATATTATCAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGTGAGTTCTTTGGATaGCAATCGATATCCATCATT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESEFFG*QSISII
Trigger: AATGATGGATATCGATTGTCATCCAAAGAACTCACT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAACCAGGGTCACAGCTaGAAACTACTTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENQGHS*KLLWFC
Trigger: ACAAAACCAAAGTAGTTTTCAGCTGTGACCCTGGTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTGACATATCCTCACTaGAGAACCAATCAATCGAAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELTYPH*RTNQSK
Trigger: TTTCGATTGATTGGTTCTTCAGTGAGGATATGTCAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACAACACTTCCTACTTaGAATCCGAATGTATTGTTC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETTLPT*NPNVLF
Trigger: GAACAATACATTCGGATTTCAAGTAGGAAGTGTTGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGGCACTCTGTCTCATaGTACAAAAAGTCAAGACTG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERHSVS*YKKSRL
Trigger: CAGTCTTGACTTTTTGTATCATGAGACAGAGTGCCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTCGGCTTTCCCCTTTaGGGATCCCTTTCATATTAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLGFPL*GSLSYY
Trigger: ATAATATGAAAGGGATCCGCAAAGGGGAAAGCCGAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTATTATTACCCATGTaGAGTTTGCACCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELLLPM*SLHHLD
Trigger: ATCCAAATGGTGCAAACTGCACATGGGTAATAATAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCGACGTCGAATCTTGTaGCATATAATACACCTTTGG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERRRIL*HIIHLW
Trigger: CCAAAGGTGTATTATATGGCACAAGATTCGACGTCG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCTATGAGTAACAACTaGAAGCTCTTTAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESMSNN*KLFSSF
Trigger: GAAAGAACTAAAGAGCTTGCAGTTGTTACTCATAGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTATTCGTTGCAGATaGACCACATTCAGCCACACA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIIRCR*TTFSHT
Trigger: TGTGTGGCTGAATGTGGTGCATCTGCAACGAATAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCCTCAATCATCCACATaGAACGCAGGTTATTGTCAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEPQSST*NAGYCH
Trigger: ATGACAATAACCTGCGTTGCATGTGGATGATTGAGG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCAAAAGCAAGAAACTaGAAGCTGACAATATTTCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESKARN*KLTIFP
Trigger: TGGAAATATTGTCAGCTTGCAGTTTCTTGCTTTTGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGATTTTCTACCTGAATaGAGGTTATTCTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEDFLPE*RLFFPL
Trigger: GAGAGGAAAGAATAACCTGCATTCAGGTAGAAAATC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAGATCCTGTTAAATTaGCTCCACAGGGTGCTATAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKILLN*LHRVLY
Trigger: GTATAGCACCCTGTGGAGGCAATTTAACAGGATCTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTCTCTCTGGTAACTTaGTGTCTTGAAAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEFSLVT*CLENFQ
Trigger: TTGGAAGTTTTCAAGACAGCAAGTTACCAGAGAGAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCATTGTATTTGAGCTaGTTTCTATTCTCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEALYLS*FLFSLV
Trigger: TACCAGAGAGAATAGAAAGCAGCTCAAATACAATGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTGGTGATAGAACAGTaGCTTCTGAACCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELVIEQ*LLNLLN
Trigger: GTTCAACAGGTTCAGAAGGCACTGTTCTATCACCAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGTTTCACACCTAATTaGTATGGATCCATGGAGAAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHECFTPN*YGSMEN
Trigger: ATTCTCCATGGATCCATAGCAATTAGGTGTGAAACA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGTCGTTCTCCTAATCTaGACGTCAGAATTGCATTAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEVVLLI*TSELHY
Trigger: GTAATGCAATTCTGACGTGCAGATTAGGAGAACGAC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTCTGCACACAGCACTaGTTTTTCCAACAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFCTQH*FFQQVG
Trigger: TCCGACTTGTTGGAAAAAGCAGTGCTGTGTGCAGAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACACTCCAAGTGCCATCTaGTTGACATATTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNTPSAI*LTYSGA
Trigger: AGCACCAGAATATGTCAAGCAGATGGCACTTGGAGT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAACAAAGCCATCCATTaGCCAATTTTCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENKAIH*PIFFLH
Trigger: ATGAAGGAAGAAAATTGGGCAATGGATGGCTTTGTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAATACTGATAGTGGATaGTCCTCCAATATATGCAAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPENTDSG*SSNICK
Trigger: TTTGCATATATTGGAGGAGCATCCACTATCAGTATT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCAAGGAAATCAAACTaGGATTCCAGGTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEARKSN*DSRSKS
Trigger: TGACTTTGACCTGGAATCCCAGTTTGATTTCCTTGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAATGGCCACCACATaGGGCTCCACATTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKMATT*GSTFWN
Trigger: ATTCCAAAATGTGGAGCCCCATGTGGTGGCCATTTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTACTAAATAGAAACTaGGGCACTTGGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLLNRN*GTWVPL
Trigger: CAATGGCACCCAAGTGCCCCAGTTTCTATTTAGTAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAACAATTCAGAGAATTTaGATAAAATTCCGGGTAACC +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPETIQRI*IKFRVT
Trigger: GGTTACCCGGAATTTTATCCAAATTCTCTGAATTGT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGTGGAGAGTGTAGCCTaGATTGCATCCATAAATGAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEVESVA*IASIND
Trigger: ATCATTTATGGATGCAATCCAGGCTACACTCTCCAC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAATCCGTGTCAAACTaGATGGTTACTATATTGAGG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKSVSN*MVTILR
Trigger: CCTCAATATAGTAACCATCCAGTTTGACACGGATTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAAACTTCCAATCAGTaGGCTATTACTGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKTSNQ*AITVWS
Trigger: GGACCAGACAGTAATAGCCCACTGATTGGAAGTTTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCTTCTTCCGAATCTTaGTTCAGGCACAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSSSES*FRHRTA
Trigger: TGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTGCTATGGATCCATaGAGAATATATCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIAMDP*RIYPGL
Trigger: TAATCCAGGATATATTCTCCATGGATCCATAGCAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGTACTATTCAAAAGATaGGGTATTGTTGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEVLFKR*GIVVPE
Trigger: TTCAGGAACAACAATACCCCATCTTTTGAATAGTAC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGCAATCTAAACTGCTaGGATAGTTTCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKECNLNC*DSFQET
Trigger: GGTTTCCTGGAAACTATCCCAGCAGTTTAGATTGCA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACACATTTGAAGATTTaGGTAACTGTCAGGATATCC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETHLKI*VTVRIS
Trigger: GGATATCCTGACAGTTACCCAAATCTTCAAATGTGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCATGTTCCATCTGATTaGCATACAGCTGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEHVPSD*HTAVVS
Trigger: ACTCACTACAGCTGTATGCCAATCAGATGGAACATG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAAGGAATTGATGCTTaGACATGTAACAACAACACA +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKGIDA*TCNNNT
Trigger: TGTGTTGTTGTTACATGTCCAAGCATCAATTCCTTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS-3UTR CCA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAATGAAACCTCTGACTaGTATATAAAGCTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KNTLLYHSSGKGDPASPENETSD*YIKLLP
Trigger: AGGCAAAAGCTTTATATACCAGTCAGAGGTTTCATT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAACCAGCTTCACAAATaGGAACTTTTCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNQLHK*ELFQSR
Trigger: CCTGGACTGGAAAAGTTCCCATTTGTGAAGCTGGTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCCACTGACTTTGCGTTaGTGTCATACATGGGATTTT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEPLTLR*CHTWDF
Trigger: AAAATCCCATGTATGACACCAACGCAAAGTCAGTGG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGATTCAAATTGGAATaGGAAACCTTATGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERFKLE*ETLCLP
Trigger: CGGAAGACATAAGGTTTCCCATTCCAATTTGAATCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATCAGTAAATATGAGTaGAATTGTGTCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNISKYE*NCVPRL
Trigger: GAGCCTGGGGACACAATTTCACTCATATTTACTGAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAATCCACGGTATCGATaGTTGCTGTCTGTAACAAAA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENPRYR*LLSVTK
Trigger: TTTTGTTACAGACAGCAATCATCGATACCGTGGATT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTGAACTTCCTAATTaGAAGTTGTCCCCAAACCGC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIELPN*KLSPNR
Trigger: GCGGTTTGGGGACAACTTTCAATTAGGAAGTTCAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGGATCTTCACAGTGTaGGAGTTCAAAACTGGTATA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERIFTV*EFKTGI
Trigger: TATACCAGTTTTGAACTCTCACACTGTGAAGATCCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAATCGAATTGTGATCTaGTTACCTGAACTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENRIVI*LPELSG
Trigger: TCCACTGAGTTCAGGTAATCAGATCACAATTCGATT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATAGCACCACCACACTaGGCTAAACAAATTGGGATT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIAPPH*AKQIGI
Trigger: AATCCCAATTTGTTTAGCTCAGTGTGGTGGTGCTAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAACAGTACTAGTTTCTaGGGATCCACTTCGTACTTC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNSTSF*GSTSYF
Trigger: GAAGTACGAAGTGGATCCTCAGAAACTAGTACTGTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTTCATGGGTGGTGCTaGATAAGGAAGATGGTATTT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEFHGWC*IRKMVF
Trigger: AAATACCATCTTCCTTATTCAGCACCACCCATGAAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATAACCCTTTTCCACTaGAATGCTCCATGCACACAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNITLFH*NAPCTH
Trigger: ATGTGTGCATGGAGCATTTCAGTGGAAAAGGGTTAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCAGGAATAAATGACTaGACTAGAAAATGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEAGIND*TRKCCA
Trigger: GGCACAACATTTTCTAGTTCAGTCATTTATTCCTGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAGGAAAATTGCAGCTaGATGAAACCTCTGACTGGT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKENCS*MKPLTG
Trigger: ACCAGTCAGAGGTTTCATTCAGCTGCAATTTTCCTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTACCCCATAGCTCACTaGATAATACTGGTTACTCCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNYPIAH*IILVTP
Trigger: TGGAGTAACCAGTATTATTCAGTGAGCTATGGGGTA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCGACGTCGAATCTTGTaGCATATAATACACCTTTGG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRRRIL*HIIHLW
Trigger: CCAAAGGTGTATTATATGGCACAAGATTCGACGTCG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTGTCTGTAACAAAATaGAGTCTGAGCCAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELSVTK*SLSQFL
Trigger: CAAAAACTGGCTCAGACTGCATTTTGTTACAGACAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCATCACAAGAGAACTaGACAGTTGATCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSSQEN*TVDPRL
Trigger: TAGCCTTGGATCAACTGTGCAGTTCTCTTGTGATGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACATTTGGCTACTCATaGTCACTATCAAGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKETFGYS*SLSSLV
Trigger: TACCAGACTTGATAGTGAGCATGAGTAGCCAAATGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAACTGTTCCCATTGGTaGAGTAAAGTTAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNCSHW*SKVRQA
Trigger: TGCCTGTCTAACTTTACTGCACCAATGGGAACAGTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCTCAATCATCCACATaGAACGCAGGTTATTGTCAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPQSST*NAGYCH
Trigger: ATGACAATAACCTGCGTTGCATGTGGATGATTGAGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCAAAAGCAAGAAACTaGAAGCTGACAATATTTCCA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESKARN*KLTIFP
Trigger: TGGAAATATTGTCAGCTTGCAGTTTCTTGCTTTTGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCGACTGCAAATTCATTaGCAATTCTTCTTCCGAATC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERLQIH*QFFFRI
Trigger: GATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGAATCCAAACCAATTaGTGTGTATTCAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGIQTN*CVFKMK
Trigger: TTTCATCTTGAATACACAGCAATTGGTTTGGATTCC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAATGGTGCCATTCATTaGAGTTATATTCCCACCACA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENGAIH*SYIPTT
Trigger: TGTGGTGGGAATATAACTGCAATGAATGGCACCATT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTCGTTCTCCTAATCTaGACGTCAGAATTGCATTAC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVVLLI*TSELHY
Trigger: GTAATGCAATTCTGACGTGCAGATTAGGAGAACGAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCCTTTTCCACTGAAATaGTCCATGCACACATTTGAA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEPFPLK*SMHTFE
Trigger: TTCAAATGTGTGCATGGAGCATTTCAGTGGAAAAGG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGCCTTTGTTGGCCCTTaGATAAGATACCCAATATTG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNAFVGP*IRYPIL
Trigger: CAATATTGGGTATCTTATGCAAGGGCCAACAAAGGC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAATACTGATAGTGGATaGTCCTCCAATATATGCAAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENTDSG*SSNICK
Trigger: TTTGCATATATTGGAGGAGCATCCACTATCAGTATT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCAGTTTGCACCATTTaGATATCCATATGGAAAACC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEAVCTI*ISIWKT
Trigger: GGTTTTCCATATGGATATCCAAATGGTGCAAACTGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCATATAATACACCTTTaGGTGGAACACCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEHIIHL*VEHQDF
Trigger: GAAATCCTGGTGTTCCACCCAAAGGTGTATTATATG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGTAAAGGTACCACTTaGTCCTTGAAGATTAGAGCC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCKGTT*SLKIRA
Trigger: GGCTCTAATCTTCAAGGACCAAGTGGTACCTTTACA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGGGAAAGATACAGATaGGTATGTTTGCAGACCATT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERERYR*VCLQTI
Trigger: AATGGTCTGCAAACATACCCATCTGTATCTTTCCCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTTCCATACCCTTCTaGGTAATCAGGAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEISIPF*VIRRKN
Trigger: GTTCTTTCTCCTGATTACCCAGAAGGGTATGGAAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAGAATTGGGGATTCTaGAGAGTCACCATCTTTAAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKNWGF*RVTIFN
Trigger: GTTAAAGATGGTGACTCTCCAGAATCCCCAATTCTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACAATTCAGAGAATTTaGATAAAATTCCGGGTAACC +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETIQRI*IKFRVT
Trigger: GGTTACCCGGAATTTTATCCAAATTCTCTGAATTGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGCACACCTTTTCCATaGGTTACATCAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCTPFP*VTSTVH
Trigger: ATGGACTGTTGATGTAACCCATGGAAAAGGTGTGCA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTCATTATATTGCCTaGATCAAAGCAGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIHYIA*IKAGLS
Trigger: CGAGAGTCCTGCTTTGATCCAGGCAATATAATGAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATTGCTATGGATCCATaGAGAATATATCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEIAMDP*RIYPGL
Trigger: TAATCCAGGATATATTCTCCATGGATCCATAGCAAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGTACTATTCAAAAGATaGGGTATTGTTGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEVLFKR*GIVVPE
Trigger: TTCAGGAACAACAATACCCCATCTTTTGAATAGTAC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCTTCTTACAGGTCCTaGCATACATGTAATGTGAGA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESSYRS*HTCNVR
Trigger: TCTCACATTACATGTATGCCAGGACCTGTAAGAAGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGCAATCTAAACTGCTaGGATAGTTTCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCNLNC*DSFQET
Trigger: GGTTTCCTGGAAACTATCCCAGCAGTTTAGATTGCA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTCACACCTTGGAAGTaGATGATTCCAATTACGACT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEFTPWK*MIPITT
Trigger: AGTCGTAATTGGAATCATCCACTTCCAAGGTGTGAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAATATATCCATGAGGTaGGGATTCTGGTGTACTACA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENISMR*GFWCTT
Trigger: TGTAGTACACCAGAATCCCCACCTCATGGATATATT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCATGTTCCATCTGATTaGCATACAGCTGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNHVPSD*HTAVVS
Trigger: ACTCACTACAGCTGTATGCCAATCAGATGGAACATG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTCACAATCAGTTCTaGAATTCCACAATGACCCGC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIHNQF*NSTMTR
Trigger: GCGGGTCATTGTGGAATTCCAGAACTGATTGTGAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGTTCTTCCATAAATTaGACTACCAGGGTGACCACA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCSSIN*TTRVTT
Trigger: TGTGGTCACCCTGGTAGTCCAATTTATGGAAGAACA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTGGCTGGTATACCTaGGTCTCCACAACTGATTAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIGWYT*VSTTDY
Trigger: ATAATCAGTTGTGGAGACCCAGGTATACCAGCCAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTGCTTGACATATTCTaGTGCTTGATCCCACTAATA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELLDIF*CLIPLI
Trigger: TATTAGTGGGATCAAGCACCAGAATATGTCAAGCAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTAGGCGAGCTTCCTaGCTTTTATATACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIRRAS*LLYTPE
Trigger: TTCAGGGGTATATAAAAGCCAGGAAGCTCGCCTAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCGTTGGTGTCATACATaGGATTTTCAAAAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKERWCHT*DFQKLL
Trigger: AAGCAGCTTTTGAAAATCCCATGTATGACACCAACG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTTCTGCCAGCCAAATaGTTTTTGGGTGAGGAAACA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFLPAK*FLGEET
Trigger: TGTTTCCTCACCCAAAAACCATTTGGCTGGCAGAAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAATCCACGGTATCGATaGTTGCTGTCTGTAACAAAA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNPRYR*LLSVTK
Trigger: TTTTGTTACAGACAGCAATCATCGATACCGTGGATT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATGAAATGTTCTGGCTaGAATATTGATTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEMKCSG*NIDSLS
Trigger: GGAAAGGGAATCAATATTTCAGCCAGAACATTTCAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAAGCACCTAGTAGATaGGTCGTTTTATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKAPSR*VVLSFP
Trigger: TGGAAAAGATAAAACGACTCATCTACTAGGTGCTTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGGATCTTCACAGTGTaGGAGTTCAAAACTGGTATA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRIFTV*EFKTGI
Trigger: TATACCAGTTTTGAACTCTCACACTGTGAAGATCCT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGATGGTTACTATATTaGGGGTGCTATGAATTCCTT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGWLLY*GCYEFL
Trigger: AAGGAATTCATAGCACCCTCAATATAGTAACCATCC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAACAACATCGTGGAGTaGTGTCTGGAAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENNIVE*CLEKYK
Trigger: TTTGTATTTTTCCAGACATCACTCCACGATGTTGTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTGCAGCAGAAACACTaGTGTCTGATTGAAAATTTA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKELQQKH*CLIENL
Trigger: TAAATTTTCAATCAGACATCAGTGTTTCTGCTGCAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTTCATGGGTGGTGCTaGATAAGGAAGATGGTATTT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFHGWC*IRKMVF
Trigger: AAATACCATCTTCCTTATTCAGCACCACCCATGAAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGGGAAACATTCAAATaGAATGGTTTGACCCACAGT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNWETFK*NGLTHS
Trigger: ACTGTGGGTCAAACCATTTCATTTGAATGTTTCCCA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATAAGCACTGGACTTTaGATATTTGGTCCATCATAC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEISTGL*IFGPSY
Trigger: GTATGATGGACCAAATATTCAAAGTCCAGTGCTTAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGAGCCATATGAAGTTTaGGTTCCAATCTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEEPYEV*VPILFP
Trigger: TGGAAATAAGATTGGAACTCAAACTTCATATGGCTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGCTGGCATTACTGTATaGTACAGTTTAAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNAGITV*YSLNEP
Trigger: TGGCTCATTTAAACTGTATCATACAGTAATGCCAGC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTACCCATGTGCAGTTTaGACCATTTGGATATCCATA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNYPCAV*TIWISI
Trigger: TATGGATATCCAAATGGTGCAAACTGCACATGGGTA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTTATTTGTATTCACTaGTGTGATGACCCAGACACA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLICIH*CDDPDT
Trigger: TGTGTCTGGGTCATCACAGCAGTGAATACAAATAAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACACAGATGGGTATGTTTaGAGACCATTGGTTATTCTC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNTDGYV*RPLVIL
Trigger: GAGAATAACCAATGGTCTGCAAACATACCCATCTGT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGATTTTCTACCTGAATaGAGGTTATTCTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEDFLPE*RLFFPL
Trigger: GAGAGGAAAGAATAACCTGCATTCAGGTAGAAAATC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGTTTCACACCTAATTaGTATGGATCCATGGAGAAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKECFTPN*YGSMEN
Trigger: ATTCTCCATGGATCCATAGCAATTAGGTGTGAAACA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTCAAGATGAAATCCTaGAGCAGAAACACTGATGTC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFKMKS*SRNTDV
Trigger: GACATCAGTGTTTCTGCTGCAGGATTTCATCTTGAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCAGGTTATTGTCATATaGAAAAGGATAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNQVIVI*KRIARR
Trigger: TCTCCTGGCTATCCTTTTCCATATGACAATAACCTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAATCCGTGTCAAACTaGATGGTTACTATATTGAGG +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKSVSN*MVTILR
Trigger: CCTCAATATAGTAACCATCCAGTTTGACACGGATTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGGGCTATTACTGTCTaGTCCATCATAGATATAGAG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNWAITV*SIIDIE
Trigger: CTCTATATCTATGATGGACCAGACAGTAATAGCCCA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCTTCTTACAGGTCCTaGCATACATGTAATGTGAGA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSSYRS*HTCNVR
Trigger: TCTCACATTACATGTATGCCAGGACCTGTAAGAAGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTATAAGCTGGTTTCATaGGTGGTGCTGAATAAGGAA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNYKLVS*VVLNKE
Trigger: TTCCTTATTCAGCACCACCCATGAAACCAGCTTATA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTCACACCTTGGAAGTaGATGATTCCAATTACGACT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFTPWK*MIPITT
Trigger: AGTCGTAATTGGAATCATCCACTTCCAAGGTGTGAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCTTTTAGAATTGGCTaGAATTCCAGGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESFRIG*NSRIRT
Trigger: TGTTCTGATCCTGGAATTCCAGCCAATTCTAAAAGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGCACCTAGTAGATaGGTCGTTTTATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKAPSR*VVLSFP
Trigger: TGGAAAAGATAAAACGACTCATCTACTAGGTGCTTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCAAATGCATTGTATTTaGGCTGCTTTCTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNQMHCI*AAFYSL
Trigger: GAGAGAATAGAAAGCAGCTCAAATACAATGCATTTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCATCACAGTAATAGGTaGCTGTTGACCCTAATTTAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNHHSNR*LLTLIY
Trigger: ATAAATTAGGGTCAACAGTCACCTATTACTGTGATG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAACAACATCGTGGAGTaGTGTCTGGAAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNNIVE*CLEKYK
Trigger: TTTGTATTTTTCCAGACATCACTCCACGATGTTGTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATCAAAAAGAACCGATaGACCGACTGCAAATTCATT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIKKNR*TDCKFI
Trigger: AATGAATTTGCAGTCGGTTCATCGGTTCTTTTTGAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTGCAGCAGAAACACTaGTGTCTGATTGAAAATTTA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLQQKH*CLIENL
Trigger: TAAATTTTCAATCAGACATCAGTGTTTCTGCTGCAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATAAGCACTGGACTTTaGATATTTGGTCCATCATAC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNISTGL*IFGPSY
Trigger: GTATGATGGACCAAATATTCAAAGTCCAGTGCTTAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTATATTAAAAGCAGATaGATAATCCCCACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNYIKSR*IIPTEG
Trigger: TCCCTCAGTGGGGATTATTCATCTGCTTTTAATATA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGTGAGTTCTTTGGATaGCAATCGATATCCATCATT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSEFFG*QSISII
Trigger: AATGATGGATATCGATTGTCATCCAAAGAACTCACT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR TCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTTTCTCCAATGACTTaGCCATTCACAATCAGTTCT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFSPMT*PFTISS
Trigger: AGAACTGATTGTGAATGGTCAAGTCATTGGAGAAAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTATTATTACCCATGTaGAGTTTGCACCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLLLPM*SLHHLD
Trigger: ATCCAAATGGTGCAAACTGCACATGGGTAATAATAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCTATTTCGTTCTTCTaGTATTATTACCCATGTGCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESISFF*YYYPCA
Trigger: TGCACATGGGTAATAATAGCAGAAGAACGAAATAGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCTATGAGTAACAACTaGAAGCTCTTTAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESMSNN*KLFSSF
Trigger: GAAAGAACTAAAGAGCTTGCAGTTGTTACTCATAGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTGATTCCCTTTCCTaGTTGAACCTGAATACTATA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIDSLS*LNLNTI
Trigger: TATAGTATTCAGGTTCAAGCAGGAAAGGGAATCAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCAAAAGCAAGAAACTaGAAGCTGACAATATTTCCA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKESKARN*KLTIFP
Trigger: TGGAAATATTGTCAGCTTGCAGTTTCTTGCTTTTGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGATTTTCTACCTGAATaGAGGTTATTCTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNDFLPE*RLFFPL
Trigger: GAGAGGAAAGAATAACCTGCATTCAGGTAGAAAATC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTCTCTCTGGTAACTTaGTGTCTTGAAAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFSLVT*CLENFQ
Trigger: TTGGAAGTTTTCAAGACAGCAAGTTACCAGAGAGAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGGAATCCAAACCAATTaGTGTGTATTCAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEGIQTN*CVFKMK
Trigger: TTTCATCTTGAATACACAGCAATTGGTTTGGATTCC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGATTTATTGTCCATGTaGAATCTAAACTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNDLLSM*NLNCWD
Trigger: ATCCCAGCAGTTTAGATTGCACATGGACAATAAATC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTTGCTGATAATTGGTaGTGGTATATTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVADNW*WYIHSR
Trigger: TCTGGAATGAATATACCACCACCAATTATCAGCAAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACAATTCAGAGAATTTaGATAAAATTCCGGGTAACC +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKETIQRI*IKFRVT
Trigger: GGTTACCCGGAATTTTATCCAAATTCTCTGAATTGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTTGAGTGGATAATTTaGAGACAGCAAAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVEWII*RQQNSF
Trigger: GAAGGAATTTTGCTGTCTCCAAATTATCCACTCAAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTGAGAGTTCAAAACTaGTATACACAAGTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVRVQN*YTQVES
Trigger: GCTTTCAACTTGTGTATACCAGTTTTGAACTCTCAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGAGGAAGTCATAGTTTaGTTCTATGCTAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEEEVIV*FYAKTD
Trigger: ATCAGTTTTAGCATAGAACCAAACTATGACTTCCTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTGCTATGGATCCATaGAGAATATATCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIAMDP*RIYPGL
Trigger: TAATCCAGGATATATTCTCCATGGATCCATAGCAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGTACTATTCAAAAGATaGGGTATTGTTGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEVLFKR*GIVVPE
Trigger: TTCAGGAACAACAATACCCCATCTTTTGAATAGTAC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTACACCAAAACCTATaGGTAGATTTATTGTCCATG +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVHQNL*VDLLSM
Trigger: CATGGACAATAAATCTACCCATAGGTTTTGGTGTAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAAGGAATTGATGCTTaGACATGTAACAACAACACA +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKGIDA*TCNNNT
Trigger: TGTGTTGTTGTTACATGTCCAAGCATCAATTCCTTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS-3UTR CCA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAATGAAACCTCTGACTaGTATATAAAGCTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KSRLFTELSIFERDNNKENETSD*YIKLLP
Trigger: AGGCAAAAGCTTTATATACCAGTCAGAGGTTTCATT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCTATTTCGTTCTTCTaGTATTATTACCCATGTGCA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSISFF*YYYPCA
Trigger: TGCACATGGGTAATAATAGCAGAAGAACGAAATAGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR GCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTGATTCCCTTTCCTaGTTGAACCTGAATACTATA +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIDSLS*LNLNTI
Trigger: TATAGTATTCAGGTTCAAGCAGGAAAGGGAATCAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CCA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTTGGATATCCATATaGAAAACCAGGGCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIWISI*KTRAFY
Trigger: ATAGAAAGCCCTGGTTTTCCATATGGATATCCAAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp CCCCTTTGCGGATCCCTTTCATATTATTCGCGAGCTCCTAATTCCTaGTCCTCAGCCCGGCGCAGTGGAGTTGTTGCTGTTGTTGGTGCG +
Preference number: 5 (lower is better)
Translates to: PLCGSLSYYSRAPNS*SSARRSGVVAVVGA
Trigger: CGCACCAACAACAGCAACAACTCCACTGCGCCGGGCTGAGGAGCAGGAATTAGGAGCTCGCGAATAATATGAAAGGGATCCGCAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000497026.5
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCAGGCTCCCAGGGTTaGGATTCCTTTGCTCGGCTT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPGSQG*DSFARL
Trigger: AAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS CCA 90 bp CTGTTCAGCATGTCTTGGTCTTCTCCTGGTACTTTGTGTATCTGCTaGATGAGGAGAGAGCCCGTCCTTGGACGTGTTGGGGTCCAGACC +
Preference number: 5 (lower is better)
Translates to: LFSMSWSSPGTLCIC*MRREPVLGRVGVQT
Trigger: GGTCTGGACCCCAACACGTCCAAGGACGGGCTCTCTCCTCATCCAGCAGATACACAAAGTACCAGGAGAAGACCAAGACATGCTGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCAGGCGTGCCAGTGGTaGGGTAAAACTGCCATTCTC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGQACQW*GKTAIL
Trigger: GAGAATGGCAGTTTTACCCAACCACTGGCACGCCTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCAGGAACACTTAGCTTaGGGCTGGGTGTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGQEHLA*GWVFPV
Trigger: CACTGGGAACACCCAGCCCAAAGCTAAGTGTTCCTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp TCAGCATGTCTTGGTCTTCTCCTGGTACTTTGTGTATCTGCTGGATaGGGAGAGAGCCCGTCCTTGGACGTGTTGGGGTCCAGACCTGAA +
Preference number: 5 (lower is better)
Translates to: SACLGLLLVLCVSAG*GESPSLDVLGSRPE
Trigger: TTCAGGTCTGGACCCCAACACGTCCAAGGACGGGCTCTCTCCTCATCCAGCAGATACACAAAGTACCAGGAGAAGACCAAGACATGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS TCA 90 bp AAGGCAGAGGATAGTCCCATGCCCTTCTCTCCCCTGTCATGCACTTaGGAAGGCTACTTCCGTGGAGAGTGTAGCCTGGATTGCATCCAT +
Preference number: 5 (lower is better)
Translates to: KAEDSPMPFSPLSCT*EGYFRGECSLDCIH
Trigger: ATGGATGCAATCCAGGCTACACTCTCCACGGAAGTAGCCTTCTCAAGTGCATGACAGGGGAGAGAAGGGCATGGGACTATCCTCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp TGCCAGGCTCCCAGGGTTTGGATTCCTTTGCTCGGCTTTCCCCTTTaGGGATCCCTTTCATATTATTCGCGAGCTCCTAATTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CQAPRVWIPLLGFPL*GSLSYYSRAPNSCS
Trigger: GGAGCAGGAATTAGGAGCTCGCGAATAATATGAAAGGGATCCGCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000455883.2
ENST00000497026.5
CDS GCA 90 bp ACGACCTCCACATTCAGCAATACAGGAAGGCAGAGGATAGTCCCATaGCCTTCTCTCCCCTGTCATGCACTTGAGAAGGCTACTTCCGTG +
Preference number: 5 (lower is better)
Translates to: TTSTFSNTGRQRIVP*PSLPCHALEKATSV
Trigger: CACGGAAGTAGCCTTCTCAAGTGCATGACAGGGGAGAGAAGGGCATGGGACTATCCTCTGCCTTCCTGTATTGCTGAATGTGGAGGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCGCCCCCATCGCCAATaGTCAAGGTATCATAGCCAA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGRPHRQ*SRYHSQ
Trigger: TTGGCTATGATACCTTGACAATTGGCGATGGGGGCG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCTAACAACTTGCACTaGAATGCCAGCTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGANNLH*NASSLW
Trigger: CCAGAGGGAGCTGGCATTCAAGTGCAAGTTGTTAGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp TTTAGCGCATCTTCGCTTGCCAGGCTCCCAGGGTTTGGATTCCTTTaGTCGGCTTTCCCCTTTGCGGATCCCTTTCATATTATTCGCGAG +
Preference number: 5 (lower is better)
Translates to: FSASSLARLPGFGFL*SAFPFADPFHIIRE
Trigger: CTCGCGAATAATATGAAAGGGATCCGCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTGGCAAGCGAAGATGCGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000455883.2
ENST00000497026.5
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCTCGGCTTTCCCCTTaGCGGATCCCTTTCATATTA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGARLSP*RIPFIL
Trigger: TAATATGAAAGGGATCCGCAAAGGGGAAAGCCGAGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGCCACGTCCTGACATaGAGTGGTCAGCCTGAAATT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSHVLT*SGQPEI
Trigger: AATTTCAGGCTGACCACTCAATGTCAGGACGTGGCT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCAAACCGCCGTGCATaGATTGGTATTCCAGGATCA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPNRRA*IGIPGS
Trigger: TGATCCTGGAATACCAATCAATGCACGGCGGTTTGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATGGGGCTCCACATTTaGGAATCAGTCCACTCCACA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGMGLHI*ESVHST
Trigger: TGTGGAGTGGACTGATTCCAAAATGTGGAGCCCCAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACCAGCAAAGTGGCCTaGGTCACTGATCTTGTATCC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTSKVA*VTDLVS
Trigger: GGATACAAGATCAGTGACCAAGGCCACTTTGCTGGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTCCACTGCTAGGAGTTaGTGGTTCAGGACAGGAATC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSTARS*WFRTGI
Trigger: GATTCCTGTCCTGAACCACAAACTCCTAGCAGTGGA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGAACAGTTGACCACTTaGCACATAGGTGGAGGATGG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGEQLTT*HIGGGW
Trigger: CCATCCTCCACCTATGTGCAAAGTGGTCAACTGTTC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCAGACCATGTTCCATaGGCTGTGCACTGTCTAACT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPDHVP*AVHCLT
Trigger: AGTTAGACAGTGCACAGCCAATGGAACATGGTCTGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCATATCTCAGTCCATaGGCTGGTATACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPYLSP*AGIPGS
Trigger: AGACCCAGGTATACCAGCCAATGGACTGAGATATGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCATCCCTACGACATTaGCATGAGCAGGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPSLRH*HEQEFL
Trigger: CAGAAACTCCTGCTCATGCAAATGTCGTAGGGATGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGTAGCAGCTCCATGTaGCTATTGCTCAGTGTTGCG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSSSSM*LLLSVA
Trigger: CGCAACACTGAGCAATAGCAACATGGAGCTGCTACT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp CAGGGACTGGCGCATCCCATGCATGATACCCATAGGAAGACTTTCTaGACACAGCACTGCTTTTTCCAACAAGTCGGAATCCTCGATCAC +
Preference number: 5 (lower is better)
Translates to: QGLAHPMHDTHRKTF*TQHCFFQQVGILDH
Trigger: GTGATCGAGGATTCCGACTTGTTGGAAAAAGCAGTGCTGTGTGCAGAAAGTCTTCCTATGGGTATCATGCATGGGATGCGCCAGTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CCA 90 bp CCCTGTCATGCACTTGAGAAGGCTACTTCCGTGGAGAGTGTAGCCTaGATTGCATCCATAAATGATGGTGCTACCAGCAAAGTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: PCHALEKATSVESVA*IASINDGATSKVAL
Trigger: CAAGGCCACTTTGCTGGTAGCACCATCATTTATGGATGCAATCCAGGCTACACTCTCCACGGAAGTAGCCTTCTCAAGTGCATGACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp ACCACTTTGCACATAGGTGGAGGATGGCTCCACTGTCTGTTGGCCTaGCACTGTGCCTTTGTTGGCCCTTGCATAAGATACCCAATATTG +
Preference number: 5 (lower is better)
Translates to: TTLHIGGGWLHCLLA*HCAFVGPCIRYPIL
Trigger: CAATATTGGGTATCTTATGCAAGGGCCAACAAAGGCACAGTGCCAGGCCAACAGACAGTGGAGCCATCCTCCACCTATGTGCAAAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACACAGATTTGGTACTaGTCACTGGAGGTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTQIWY*SLEVAD
Trigger: ATCTGCCACCTCCAGTGACAAGTACCAAATCTGTGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAACTTCAGCTATCCGTaGACAGGTGATGCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGNFSYP*TGDALC
Trigger: GCAAAGAGCATCACCTGTCAACGGATAGCTGAAGTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTCACCAATCCCAAAGTaGAACCCGATTCGACTACCA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSPIPK*NPIRLP
Trigger: TGGTAGTCGAATCGGGTTCAACTTTGGGATTGGTGA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGCAAAGCTAACAACTaGCACTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSKANN*HLNASS
Trigger: GGAGCTGGCATTCAAGTGCAAGTTGTTAGCTTTGCT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTGGATCAGGACAGCTTaGCAACTGATAGGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGWIRTA*QLIGLV
Trigger: TACCAAGCCTATCAGTTGCAAAGCTGTCCTGATCCA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCCACAGGAAATTGCTaGACAGGCAGGGACTGGCGC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPTGNC*TGRDWR
Trigger: GCGCCAGTCCCTGCCTGTCAAGCAATTTCCTGTGGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGTTTTCACAAGAGGTTaGGGTAGGCTCTATGCAGTG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGVFTRG*GRLYAV
Trigger: CACTGCATAGAGCCTACCCAAACCTCTTGTGAAAAC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp GCAGGTGTGCTAGCAACAGCAATAGCACCAGTGGTAGTCCTGTTATaGTCCTCTAACTCACCAGTGGAGGTAGTGTGGGTCAATGTAGAA +
Preference number: 5 (lower is better)
Translates to: AGVLATAIAPVVVLL*SSNSPVEVVWVNVE
Trigger: TTCTACATTGACCCACACTACCTCCACTGGTGAGTTAGAGGAGCATAACAGGACTACCACTGGTGCTATTGCTGTTGCTAGCACACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS GCA 90 bp CATCCCATGCATGATACCCATAGGAAGACTTTCTGCACACAGCACTaGTTTTTCCAACAAGTCGGAATCCTCGATCACAGGCCCAACGGA +
Preference number: 5 (lower is better)
Translates to: HPMHDTHRKTFCTQH*FFQQVGILDHRPNG
Trigger: TCCGTTGGGCCTGTGATCGAGGATTCCGACTTGTTGGAAAAAGCAGTGCTGTGTGCAGAAAGTCTTCCTATGGGTATCATGCATGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS GCA 90 bp AATCCCACAGGAAATTGCTTGACAGGCAGGGACTGGCGCATCCCATaGATGATACCCATAGGAAGACTTTCTGCACACAGCACTGCTTTT +
Preference number: 5 (lower is better)
Translates to: NPTGNCLTGRDWRIP*MIPIGRLSAHSTAF
Trigger: AAAAGCAGTGCTGTGTGCAGAAAGTCTTCCTATGGGTATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAAGCAATTTCCTGTGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp CGTACAGTACTTTTAGTTCTGAAATTGCTTTCCTGTCTAGAGCCATaGCCGGGAGTACCTGGATCGCCACATGTCCCAGTAGCATCACCT +
Preference number: 5 (lower is better)
Translates to: RTVLLVLKLLSCLEP*PGVPGSPHVPVASP
Trigger: AGGTGATGCTACTGGGACATGTGGCGATCCAGGTACTCCCGGCCATGGCTCTAGACAGGAAAGCAATTTCAGAACTAAAAGTACTGTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp GGCAAAGGTTGCCTCGTTATACCATTGTGCAAACCGTGTTCAAGTTaGGATCAAATCGTACCGCCTTCCCTTCCACTGACTTTGCGTTGG +
Preference number: 5 (lower is better)
Translates to: GKGCLVIPLCKPCSS*DQIVPPSLPLTLRW
Trigger: CCAACGCAAAGTCAGTGGAAGGGAAGGCGGTACGATTTGATCCCAACTTGAACACGGTTTGCACAATGGTATAACGAGGCAACCTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTAGCGCATCTTCGCTaGCCAGGCTCCCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLAHLR*PGSQGL
Trigger: CAAACCCTGGGAGCCTGGCAAGCGAAGATGCGCTAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACTGGTATACACAAGTaGAAAGCCTTCATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTGIHK*KAFICP
Trigger: GGGACAGATGAAGGCTTTCAACTTGTGTATACCAGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCATATCCTGGGTCACATaGAAAAACAACAGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGISWVT*KNNSVP
Trigger: GGGGACACTGTTGTTTTTCAATGTGACCCAGGATAT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGCAGGACAGAGCACTaGACAAACTGGAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGRTEH*TNWRCS
Trigger: GGAGCACCTCCAGTTTGTCAAGTGCTCTGTCCTGCC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCCACAGGAAATTGCTaGACAGGCAGGGACTGGCGC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPTGNC*TGRDWR
Trigger: GCGCCAGTCCCTGCCTGTCAAGCAATTTCCTGTGGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCACACTGCACAGCTTaGCACTCTGGCTGCCTTCCG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPHCTA*HSGCLP
Trigger: CGGAAGGCAGCCAGAGTGCAAAGCTGTGCAGTGTGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGCTCCATGTTGCTATaGCTCAGTGTTGCGTTAACT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSSMLL*LSVALT
Trigger: AGTTAACGCAACACTGAGCAATAGCAACATGGAGCT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp AGACTGGTGGGCTGGGCTGCCAGAAGTACCGATTTTCTACCTGAATaGAGGTTATTCTTTCCTCTCCTTGAAGTTCATATCCTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: RLVGWAARSTDFLPE*RLFFPLLEVHILGH
Trigger: GTGACCCAGGATATGAACTTCAAGGAGAGGAAAGAATAACCTGCATTCAGGTAGAAAATCGGTACTTCTGGCAGCCCAGCCCACCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp GGCATAATATACTTCACCTTGACAGGCAGGGACTGGCGCATCCCATaGATGATACCCATAGGAAGACTTTCTGCACACAGCACTGCTTTT +
Preference number: 5 (lower is better)
Translates to: GIIYFTLTGRDWRIP*MIPIGRLSAHSTAF
Trigger: AAAAGCAGTGCTGTGTGCAGAAAGTCTTCCTATGGGTATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAAGGTGAAGTATATTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492692.1
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCAGGCTCCCAGGGTTaGGATTCCTTTGCTCGGCTT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPGSQG*DSFARL
Trigger: AAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGTCTGAGCCAGTTTTaGTTGCTGATAATTGGTGGT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGSLSQF*LLIIGG
Trigger: ACCACCAATTATCAGCAACAAAAACTGGCTCAGACT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCAATGTAGAAGAACCTaGATAGGGAGCACTAAATCC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGQCRRT*IGSTKS
Trigger: GGATTTAGTGCTCCCTATCAAGGTTCTTCTACATTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCTTCCAGTCAGCACTaGGAGCACTGTCCTAGGATC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSASSQH*EHCPRI
Trigger: GATCCTAGGACAGTGCTCCAAGTGCTGACTGGAAGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCTTGGTCACTGATCTaGTATCCAAATTGTGGAATG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPWSLI*YPNCGM
Trigger: CATTCCACAATTTGGATACAAGATCAGTGACCAAGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAATGGTGCCATTCATaGCAGTTATATTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKWCHS*QLYSHH
Trigger: GTGGTGGGAATATAACTGCAATGAATGGCACCATTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGGCAGGACAGAGCACTaGACAAACTGGAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEGRTEH*TNWRCS
Trigger: GGAGCACCTCCAGTTTGTCAAGTGCTCTGTCCTGCC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCCACAGGAAATTGCTaGACAGGCAGGGACTGGCGC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPTGNC*TGRDWR
Trigger: GCGCCAGTCCCTGCCTGTCAAGCAATTTCCTGTGGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCATTCTGGTAAAGGTTaGTCCCATTGTCCATTTGGT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGHSGKG*SHCPFG
Trigger: ACCAAATGGACAATGGGACAAACCTTTACCAGAATG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCAGGAACACTTAGCTTaGGGCTGGGTGTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSQEHLA*GWVFPV
Trigger: CACTGGGAACACCCAGCCCAAAGCTAAGTGTTCCTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTCCCAGTGGAAGCATaGAAACTAGTAACTGTTAAG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLPVEA*KLVTVK
Trigger: CTTAACAGTTACTAGTTTCAATGCTTCCACTGGGAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp CCTGAAATTTCCATAGAGACCAGCATTGATTGTTGGAGGAAGATCTaGACCAGTCAGGCGTGCCAGTGGTTGGGTAAAACTGCCATTCTC +
Preference number: 5 (lower is better)
Translates to: PEISIETSIDCWRKI*TSQACQWLGKTAIL
Trigger: GAGAATGGCAGTTTTACCCAACCACTGGCACGCCTGACTGGTTCAGATCTTCCTCCAACAATCAATGCTGGTCTCTATGGAAATTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp TCTCCTGAATGGGATCCTGAGAGGGAAGATAACAGAGAAGATTGCTaGGTTGGCCCATCATACACCTCAACAACATCGTGGAGTGATGTC +
Preference number: 5 (lower is better)
Translates to: SPEWDPEREDNREDC*VGPSYTSTTSWSDV
Trigger: GACATCACTCCACGATGTTGTTGAGGTGTATGATGGGCCAACTCAGCAATCTTCTCTGTTATCTTCCCTCTCAGGATCCCATTCAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp CAACACTTTCGTCCGTTTGAAGGTGCAGCCACATTTGGCTACTCATaGTCACTATCAAGTCTGGTACAAAGCTTCCAGTCAGCACTTGGA +
Preference number: 5 (lower is better)
Translates to: QHFRPFEGAATFGYS*SLSSLVQSFQSALG
Trigger: TCCAAGTGCTGACTGGAAGCTTTGTACCAGACTTGATAGTGAGCATGAGTAGCCAAATGTGGCTGCACCTTCAAACGGACGAAAGTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp AATCAGTGTATACCCATGAGATGGAAGGTCCATCCCTACGACATTTaGATGAGCAGGAGTTTCTGGCTGTTTACAGCTGTGGGGTATGCA +
Preference number: 5 (lower is better)
Translates to: NQCIPMRWKVHPYDI*MSRSFWLFTAVGYA
Trigger: TGCATACCCCACAGCTGTAAACAGCCAGAAACTCCTGCTCATGCAAATGTCGTAGGGATGGACCTTCCATCTCATGGGTATACACTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CCA 90 bp GAAGAAGCCAGGCTGACAGGTATAAATCAGTGTATACCCATGAGATaGAAGGTCCATCCCTACGACATTTGCATGAGCAGGAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: EEARLTGINQCIPMR*KVHPYDICMSRSFW
Trigger: CCAGAAACTCCTGCTCATGCAAATGTCGTAGGGATGGACCTTCCATCTCATGGGTATACACTGATTTATACCTGTCAGCCTGGCTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTGCAGTTTGCACCATTaGGATATCCATATGGAAAAC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGCSLHH*DIHMEN
Trigger: GTTTTCCATATGGATATCCAAATGGTGCAAACTGCA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCTTCCAGTCAGCACTaGGAGCACTGTCCTAGGATC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEASSQH*EHCPRI
Trigger: GATCCTAGGACAGTGCTCCAAGTGCTGACTGGAAGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTACAGATGGGTATGTTaGCAGACCATTGGTTATTCT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGYRWVC*QTIGYS
Trigger: AGAATAACCAATGGTCTGCAAACATACCCATCTGTA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCCCCTGTCATGCACTaGAGAAGGCTACTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESPVMH*RRLLPW
Trigger: CCACGGAAGTAGCCTTCTCAAGTGCATGACAGGGGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATGCCTTCTGAACCTGTaGAACGACTTCCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPECLLNL*NDFHRA
Trigger: CGCCCTGTGGAAGTCGTTCAACAGGTTCAGAAGGCA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCTAACAACTTGCACTaGAATGCCAGCTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSANNLH*NASSLW
Trigger: CCAGAGGGAGCTGGCATTCAAGTGCAAGTTGTTAGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAAGATGGGGTATTGTaGTTCCTGAATAGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKDGVL*FLNSFQ
Trigger: TTGGAAGCTATTCAGGAACAACAATACCCCATCTTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTGTCCCATTGTCCATTaGGTTGACATATCAAAACTG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGCPIVH*VDISKL
Trigger: CAGTTTTGATATGTCAACCAAATGGACAATGGGACA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTTTTAGTTCTGAAATaGCTTTCCTGTCTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLLVLK*LSCLEP
Trigger: TGGCTCTAGACAGGAAAGCAATTTCAGAACTAAAAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGCCTTCTCTTTTTCCTaGGGCAGGTATACCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSAFSFS*GRYTRV
Trigger: GACCCTGGTATACCTGCCCAAGGAAAAAGAGAAGGC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAAGAGGAGTAGCCAGTaGCAGAAGAAACATTGTTTA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGKRSSQ*QKKHCL
Trigger: TAAACAATGTTTCTTCTGCAACTGGCTACTCCTCTT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp AAGTCTATGGATGGTGACAGCTGTAACACTGGATACAGTAACATCTaGAGGTGTGCTAGCAACAGCAATAGCACCAGTGGTAGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: KSMDGDSCNTGYSNI*RCASNSNSTSGSPV
Trigger: AACAGGACTACCACTGGTGCTATTGCTGTTGCTAGCACACCTGCAGATGTTACTGTATCCAGTGTTACAGCTGTCACCATCCATAGACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS GCA 90 bp TGGCTCCACTGTCTGTTGGCCTGGCACTGTGCCTTTGTTGGCCCTTaGATAAGATACCCAATATTGCATGAGAATGTTACCACATCATTA +
Preference number: 5 (lower is better)
Translates to: WLHCLLAWHCAFVGP*IRYPILHENVTTSL
Trigger: TAATGATGTGGTAACATTCTCATGCAATATTGGGTATCTTATGCAAGGGCCAACAAAGGCACAGTGCCAGGCCAACAGACAGTGGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp ATAGTGAACAGTAGACCCAAAAGTATACTTCTCGCCAGACAGGACTaGATTAGGAGGAACGCCAGGGTGTCCACAGTCAATCATGATACA +
Preference number: 5 (lower is better)
Translates to: IVNSRPKSILLARQD*IRRNARVSTVNHDT
Trigger: TGTATCATGATTGACTGTGGACACCCTGGCGTTCCTCCTAATGCAGTCCTGTCTGGCGAGAAGTATACTTTTGGGTCTACTGTTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp TTCCAAGCTTCTGAAGAAGGCAAAGGTTGCCTCGTTATACCATTGTaGAAACCGTGTTCAAGTTGGGATCAAATCGTACCGCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: FQASEEGKGCLVIPL*KPCSSWDQIVPPSL
Trigger: AAGGGAAGGCGGTACGATTTGATCCCAACTTGAACACGGTTTGCACAATGGTATAACGAGGCAACCTTTGCCTTCTTCAGAAGCTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGGCGCAGTGGAGTTGTaGCTGTTGTTGGTGCGCGGT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEGAVEL*LLLVRG
Trigger: ACCGCGCACCAACAACAGCAACAACTCCACTGCGCC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297405.10
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGGGTTTGGATTCCTTaGCTCGGCTTTCCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERVWIP*LGFPLC
Trigger: GCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCCT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGGTACCACTTGGTCCTaGAAGATTAGAGCCACACGT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSGTTWS*KIRATR
Trigger: ACGTGTGGCTCTAATCTTCAAGGACCAAGTGGTACC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCTTCCAGTCAGCACTaGGAGCACTGTCCTAGGATC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEASSQH*EHCPRI
Trigger: GATCCTAGGACAGTGCTCCAAGTGCTGACTGGAAGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCCATTGGTTATTCTCTaGACAAACAATGGATTTCTC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGPLVIL*TNNGFL
Trigger: GAGAAATCCATTGTTTGTCAAGAGAATAACCAATGG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTATGTTTGCAGACCATaGGTTATTCTCTTGACAAAC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGYVCRP*VILLTN
Trigger: GTTTGTCAAGAGAATAACCAATGGTCTGCAAACATA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTTATTGGAACGACTGTaGTCTGTTGTAAATAGAAGG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLLERL*SVVNRR
Trigger: CCTTCTATTTACAACAGACAACAGTCGTTCCAATAA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACAGGCGTGCCAGTGGTaGGGTAAAACTGCCATTCTC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEQACQW*GKTAIL
Trigger: GAGAATGGCAGTTTTACCCAACCACTGGCACGCCTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCACTGGGCCAAAGAATaGGGCACTGTTTCACACCTA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHWAKE*GTVSHL
Trigger: TAGGTGTGAAACAGTGCCCAATTCTTTGGCCCAGTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCAGGAATCCAAACCAATaGCTGTGTATTCAAGATGAA +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGRNPNQ*LCIQDE
Trigger: TTCATCTTGAATACACAGCAATTGGTTTGGATTCCT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACTGAGCTAAACAAATaGGGATTGGATAATTCCATC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTELNK*GLDNSI
Trigger: GATGGAATTATCCAATCCCAATTTGTTTAGCTCAGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTCAAAATTTCAGCATaGGGCACAGGTGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVKISA*GTGGGG
Trigger: ACCTCCACCACCTGTGCCCAATGCTGAAATTTTGAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGAATCCCACAGGAAATaGCTTGACAGGCAGGGACTG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEESHRK*LDRQGL
Trigger: CAGTCCCTGCCTGTCAAGCAATTTCCTGTGGGATTC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCTACCAAATAGTCTGTaGTTAGTATTCCTCCATTTG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGLPNSL*LVFLHL
Trigger: CAAATGGAGGAATACTAACAACAGACTATTTGGTAG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCACCACATCATTAAAGTaGAACCCATTTCCACTTGTT +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGTTSLK*NPFPLV
Trigger: AACAAGTGGAAATGGGTTCAACTTTAATGATGTGGT...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGAACAGTTGACCACTTaGCACATAGGTGGAGGATGG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSEQLTT*HIGGGW
Trigger: CCATCCTCCACCTATGTGCAAAGTGGTCAACTGTTC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCCACACTGCACAGCTTaGCACTCTGGCTGCCTTCCG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEPHCTA*HSGCLP
Trigger: CGGAAGGCAGCCAGAGTGCAAAGCTGTGCAGTGTGG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACGGAAGACTTTCCCATaGGCTGTGGTTCCTGGGTTA +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPERKTFP*AVVPGL
Trigger: TAACCCAGGAACCACAGCCAATGGGAAAGTCTTCCG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCAGACCATGTTCCATaGGCTGTGCACTGTCTAACT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPDHVP*AVHCLT
Trigger: AGTTAGACAGTGCACAGCCAATGGAACATGGTCTGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCATATCTCAGTCCATaGGCTGGTATACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPYLSP*AGIPGS
Trigger: AGACCCAGGTATACCAGCCAATGGACTGAGATATGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACAGGAACACTTAGCTTaGGGCTGGGTGTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEQEHLA*GWVFPV
Trigger: CACTGGGAACACCCAGCCCAAAGCTAAGTGTTCCTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCGCCTTGAATAAATCCTaGAAATACATAAGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGALNKS*KYISSS
Trigger: GGAGCTACTTATGTATTTCAAGGATTTATTCAAGGC...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCTACCATGAGGTTGATTaGAAGAATTTGAACCTTCTG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGYHEVD*KNLNLL
Trigger: CAGAAGGTTCAAATTCTTCAAATCAACCTCATGGTA...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCCCTTCCACTGACTTaGCGTTGGTGTCATACATGG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSLPLT*RWCHTW
Trigger: CCATGTATGACACCAACGCAAAGTCAGTGGAAGGGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TGTTGTAGAGATAGAGCCAAGCAGCGCTCCCAGGTGCAAGGGTTTCTCTTAGGCCAGAGTTATCCATATTaGAAAGGGACAACAACAAAG +
Preference number: 5 (lower is better)
Translates to: CCRDRAKQRSQVQGFLLGQSYPY*KGTTTK
Trigger: CTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTG...GCCTAAGAGAAACCCTTGCACCTGGGAGCGCTGCTTGGCTCTATCTCTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp TGTGATCACTCCAAGCAGCAAAAACTTCAGCTATCCGTTGACAGGTaGTGCTCTTTGCGCCCTGTAGGACATAATCTTCATCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: CDHSKQQKLQLSVDR*CSLRPVGHNLHHKR
Trigger: TCTCTTGTGATGAAGATTATGTCCTACAGGGCGCAAAGAGCATCACCTGTCAACGGATAGCTGAAGTTTTTGCTGCTTGGAGTGATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp GGTAGTTCTCCACAGGAAATAACAACACAGCGAGGGGTCTTGTTATaGTTGCTCCATGTTCCATCTGATTGGCATACAGCTGTAGTGAGT +
Preference number: 5 (lower is better)
Translates to: GSSPQEITTQRGVLL*LLHVPSDWHTAVVS
Trigger: ACTCACTACAGCTGTATGCCAATCAGATGGAACATGGAGCAATCATAACAAGACCCCTCGCTGTGTTGTTATTTCCTGTGGAGAACTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455883.2
CDS CCA 90 bp CACATCATTAAAGTTGAACCCATTTCCACTTGTTCTTCCATAAATTaGACTACCAGGGTGACCACAGCTAACAGGCACACAGGATGGGAG +
Preference number: 5 (lower is better)
Translates to: HIIKVEPISTCSSIN*TTRVTTANRHTGWE
Trigger: CTCCCATCCTGTGTGCCTGTTAGCTGTGGTCACCCTGGTAGTCCAATTTATGGAAGAACAAGTGGAAATGGGTTCAACTTTAATGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp TTTGTTCATTTTGGCATAATATACTTCACCTTGACAGGCAGGGACTaGCGCATCCCATGCATGATACCCATAGGAAGACTTTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: FVHFGIIYFTLTGRD*RIPCMIPIGRLSAH
Trigger: GTGTGCAGAAAGTCTTCCTATGGGTATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAAGGTGAAGTATATTATGCCAAAATGAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492692.1
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGAGTTGTTGCTGTTGTaGGTGCGCGGTCACAGCTCG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEELLLL*VRGHSS
Trigger: CGAGCTGTGACCGCGCACCAACAACAGCAACAACTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297405.10
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAACTTCAGCTATCCGTaGACAGGTGATGCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSNFSYP*TGDALC
Trigger: GCAAAGAGCATCACCTGTCAACGGATAGCTGAAGTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGGTACCACTTGGTCCTaGAAGATTAGAGCCACACGT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEGTTWS*KIRATR
Trigger: ACGTGTGGCTCTAATCTTCAAGGACCAAGTGGTACC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCAGACACATTGTGCATaGCTGTCATACTGGAACGGA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSQTHCA*LSYWNG
Trigger: TCCGTTCCAGTATGACAGCAATGCACAATGTGTCTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGATGACCCAGACACATaGTGCATTGCTGTCATACTG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSDDPDT*CIAVIL
Trigger: CAGTATGACAGCAATGCACAATGTGTCTGGGTCATC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACGCCCCCATCGCCAATaGTCAAGGTATCATAGCCAA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERPHRQ*SRYHSQ
Trigger: TTGGCTATGATACCTTGACAATTGGCGATGGGGGCG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAGGTGCAGCCACATTaGGCTACTCATGCTCACTAT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKVQPH*ATHAHY
Trigger: ATAGTGAGCATGAGTAGCCAAATGTGGCTGCACCTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGCCACGTCCTGACATaGAGTGGTCAGCCTGAAATT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESHVLT*SGQPEI
Trigger: AATTTCAGGCTGACCACTCAATGTCAGGACGTGGCT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGGGTGACAGAAGATTaGGCCCATCATGAACTTCCA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRVTED*AHHELP
Trigger: TGGAAGTTCATGATGGGCCAAATCTTCTGTCACCCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCACCAATCCCAAAGTaGAACCCGATTCGACTACCA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSPIPK*NPIRLP
Trigger: TGGTAGTCGAATCGGGTTCAACTTTGGGATTGGTGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGGGCGCATGACAACTaGGCAAGGCTCTATTCCATC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERAHDN*ARLYSI
Trigger: GATGGAATAGAGCCTTGCCAAGTTGTCATGCGCCCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTCTTCTTCCGAATCTaGGTTCAGGCACAGAACTGC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSFFFRI*VQAQNC
Trigger: GCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACACTGGGCCAAAGAATaGGGCACTGTTTCACACCTA +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHWAKE*GTVSHL
Trigger: TAGGTGTGAAACAGTGCCCAATTCTTTGGCCCAGTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCTAACAACTTGCACTaGAATGCCAGCTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEANNLH*NASSLW
Trigger: CCAGAGGGAGCTGGCATTCAAGTGCAAGTTGTTAGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGCAAAGCTAACAACTaGCACTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSKANN*HLNASS
Trigger: GGAGCTGGCATTCAAGTGCAAGTTGTTAGCTTTGCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCCACAGGAAATTGCTaGACAGGCAGGGACTGGCGC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPTGNC*TGRDWR
Trigger: GCGCCAGTCCCTGCCTGTCAAGCAATTTCCTGTGGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCAATTGGCAGGTTCTaGATGACTGGCCTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSIGRF*MTGLKG
Trigger: CCCTTTTAGGCCAGTCATCAAGAACCTGCCAATTGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCACACTGCACAGCTTaGCACTCTGGCTGCCTTCCG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPHCTA*HSGCLP
Trigger: CGGAAGGCAGCCAGAGTGCAAAGCTGTGCAGTGTGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCAGACCATGTTCCATaGGCTGTGCACTGTCTAACT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPDHVP*AVHCLT
Trigger: AGTTAGACAGTGCACAGCCAATGGAACATGGTCTGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGTTTTCACAAGAGGTTaGGGTAGGCTCTATGCAGTG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSVFTRG*GRLYAV
Trigger: CACTGCATAGAGCCTACCCAAACCTCTTGTGAAAAC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGTAGCAGCTCCATGTaGCTATTGCTCAGTGTTGCG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESSSSM*LLLSVA
Trigger: CGCAACACTGAGCAATAGCAACATGGAGCTGCTACT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCCCTTCCACTGACTTaGCGTTGGTGTCATACATGG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESLPLT*RWCHTW
Trigger: CCATGTATGACACCAACGCAAAGTCAGTGGAAGGGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACAAACCGTGTTCAAGTaGGGATCAAATCGTACCGCC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEQTVFK*GSNRTA
Trigger: GGCGGTACGATTTGATCCCAACTTGAACACGGTTTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp TCTGATTTGAAGTACTGTAGACTGATTCCAAAGCGGTATTGCCACTaGACTGACCGATCTGAGGTGAATTTTGGTCTGGTCCATCCCATA +
Preference number: 5 (lower is better)
Translates to: SDLKYCRLIPKRYCH*TDRSEVNFGLVHPI
Trigger: TATGGGATGGACCAGACCAAAATTCACCTCAGATCGGTCAGTTCAGTGGCAATACCGCTTTGGAATCAGTCTACAGTACTTCAAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS GCA 90 bp TGGTTCTATGCTAAAACTGATGAACGCCAAGGAGATAACATAGTCTaGATTGACGGTGATAGTCCAGTCACAGTCTCTGCTATGCGGATA +
Preference number: 5 (lower is better)
Translates to: WFYAKTDERQGDNIV*IDGDSPVTVSAMRI
Trigger: TATCCGCATAGCAGAGACTGTGACTGGACTATCACCGTCAATGCAGACTATGTTATCTCCTTGGCGTTCATCAGTTTTAGCATAGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp ATTCCACCACAGGGCACAATACAAGTAGGTAAGGAATCATTCCACTaGGCCAAAGAATTGGGCACTGTTTCACACCTAATTGCTATGGAT +
Preference number: 5 (lower is better)
Translates to: IPPQGTIQVGKESFH*AKELGTVSHLIAMD
Trigger: ATCCATAGCAATTAGGTGTGAAACAGTGCCCAATTCTTTGGCCCAGTGGAATGATTCCTTACCTACTTGTATTGTGCCCTGTGGTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTGGAGTTGTTGCTGTaGTTGGTGCGCGGTCACAGC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVELLL*LVRGHS
Trigger: GCTGTGACCGCGCACCAACAACAGCAACAACTCCAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297405.10
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTAGCGCATCTTCGCTaGCCAGGCTCCCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLAHLR*PGSQGL
Trigger: CAAACCCTGGGAGCCTGGCAAGCGAAGATGCGCTAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCCCGACGTCGAATCTaGTGCCATATAATACACCTT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPRRRI*CHIIHL
Trigger: AAGGTGTATTATATGGCACAAGATTCGACGTCGGGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACACTGGATCCTCTCATaGTTCCTCCACAAGCATCTT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHWILS*FLHKHL
Trigger: AAGATGCTTGTGGAGGAACAATGAGAGGATCCAGTG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTGAGCCAGTTTTTGTaGCTGATAATTGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLSQFL*LIIGGG
Trigger: ACCACCACCAATTATCAGCAACAAAAACTGGCTCAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGATGACCCAGACACATaGTGCATTGCTGTCATACTG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEDDPDT*CIAVIL
Trigger: CAGTATGACAGCAATGCACAATGTGTCTGGGTCATC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGGTGCAGCCACATTaGGCTACTCATGCTCACTAT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKVQPH*ATHAHY
Trigger: ATAGTGAGCATGAGTAGCCAAATGTGGCTGCACCTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATGGGGCTCCACATTTaGGAATCAGTCCACTCCACA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEMGLHI*ESVHST
Trigger: TGTGGAGTGGACTGATTCCAAAATGTGGAGCCCCAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCACCAATCCCAAAGTaGAACCCGATTCGACTACCA +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESPIPK*NPIRLP
Trigger: TGGTAGTCGAATCGGGTTCAACTTTGGGATTGGTGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCCCCTGTCATGCACTaGAGAAGGCTACTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESPVMH*RRLLPW
Trigger: CCACGGAAGTAGCCTTCTCAAGTGCATGACAGGGGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGAAGATCCTGTTAAATaGCCTCCACAGGGTGCTATA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSEDPVK*PPQGAI
Trigger: TATAGCACCCTGTGGAGGCAATTTAACAGGATCTTC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGCCTTCTGAACCTGTaGAACGACTTCCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKECLLNL*NDFHRA
Trigger: CGCCCTGTGGAAGTCGTTCAACAGGTTCAGAAGGCA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGGCACAGAACTGCATaGTGTAGAACTTGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRHRTA*CRTCSR
Trigger: CCTAGAACAAGTTCTACACAATGCAGTTCTGTGCCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGTCAAAATTTCAGCATaGGGCACAGGTGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEVKISA*GTGGGG
Trigger: ACCTCCACCACCTGTGCCCAATGCTGAAATTTTGAC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGCAGGACAGAGCACTaGACAAACTGGAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGRTEH*TNWRCS
Trigger: GGAGCACCTCCAGTTTGTCAAGTGCTCTGTCCTGCC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTGTTCTTCCATAAATaGGACTACCAGGGTGACCAC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLFFHK*DYQGDH
Trigger: GTGGTCACCCTGGTAGTCCAATTTATGGAAGAACAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCAGACCATGTTCCATaGGCTGTGCACTGTCTAACT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPDHVP*AVHCLT
Trigger: AGTTAGACAGTGCACAGCCAATGGAACATGGTCTGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGCCCCAGTCGAAATTaGTTCCTTCCAGCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESPSRN*FLPAFH
Trigger: ATGGAAGGCTGGAAGGAACAAATTTCGACTGGGGCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGGTCACCACAAAACTTaGGTAAGCACTGCGGTACTT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEGHHKT*VSTAVL
Trigger: AAGTACCGCAGTGCTTACCAAAGTTTTGTGGTGACC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGTTTTCACAAGAGGTTaGGGTAGGCTCTATGCAGTG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEVFTRG*GRLYAV
Trigger: CACTGCATAGAGCCTACCCAAACCTCTTGTGAAAAC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCATCCCTACGACATTaGCATGAGCAGGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPSLRH*HEQEFL
Trigger: CAGAAACTCCTGCTCATGCAAATGTCGTAGGGATGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGCTCCATGTTGCTATaGCTCAGTGTTGCGTTAACT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSSMLL*LSVALT
Trigger: AGTTAACGCAACACTGAGCAATAGCAACATGGAGCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTCCACTGACTTTGCGTaGGTGTCATACATGGGATTT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSSTDFA*VSYMGF
Trigger: AAATCCCATGTATGACACCAACGCAAAGTCAGTGGA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCCCTTCCACTGACTTaGCGTTGGTGTCATACATGG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESLPLT*RWCHTW
Trigger: CCATGTATGACACCAACGCAAAGTCAGTGGAAGGGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACAAACCGTGTTCAAGTaGGGATCAAATCGTACCGCC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEQTVFK*GSNRTA
Trigger: GGCGGTACGATTTGATCCCAACTTGAACACGGTTTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTGCCTCGTTATACCATaGTGCAAACCGTGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSCLVIP*CKPCSS
Trigger: ACTTGAACACGGTTTGCACAATGGTATAACGAGGCA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp CCTTCATCTGTCCCTTCAGTATCGGAATTAAATTCTAGCCAGAGTTaGTTTGAAGTACTACTAAGTGTCAGTCCGCGCATAGATGCACCA +
Preference number: 5 (lower is better)
Translates to: PSSVPSVSELNSSQS*FEVLLSVSPRIDAP
Trigger: TGGTGCATCTATGCGCGGACTGACACTTAGTAGTACTTCAAATCAACTCTGGCTAGAATTTAATTCCGATACTGAAGGGACAGATGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp TTGACGGTGATAGTCCAGTCACAGTCTCTGCTATGCGGATATGGATaGGGGAAGTTTGGTGAAAGAATAAAGCCTGAAGATCCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: LTVIVQSQSLLCGYG*GKFGERIKPEDPVK
Trigger: TTTAACAGGATCTTCAGGCTTTATTCTTTCACCAAACTTCCCTCATCCATATCCGCATAGCAGAGACTGTGACTGGACTATCACCGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp TATAAGCTGGTTTCATGGGTGGTGCTGAATAAGGAAGATGGTATTTaGGGACCACTAAGCCGGCCAATAACAGTACTAGTTTCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: YKLVSWVVLNKEDGI*GPLSRPITVLVSED
Trigger: ATCCTCAGAAACTAGTACTGTTATTGGCCGGCTTAGTGGTCCTCAAATACCATCTTCCTTATTCAGCACCACCCATGAAACCAGCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp ATTCGATGGAGGCAGGACCTAGTCCATGATAACCAGGGTCACAGCTaGAAACTACTTTGGTTTTGTATTCATAATGGGAGCCATTCACAA +
Preference number: 5 (lower is better)
Translates to: IRWRQDLVHDNQGHS*KLLWFCIHNGSHSQ
Trigger: TTGTGAATGGCTCCCATTATGAATACAAAACCAAAGTAGTTTTCAGCTGTGACCCTGGTTATCATGGACTAGGTCCTGCCTCCATCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS TCA 90 bp AGTGAACTAAATGTGCACTGTTTTGTGTGTCGATTTCCAAGCTTCTaGAGAAGGCAAAGGTTGCCTCGTTATACCATTGTGCAAACCGTG +
Preference number: 5 (lower is better)
Translates to: SELNVHCFVCRFPSF*RRQRLPRYTIVQTV
Trigger: CACGGTTTGCACAATGGTATAACGAGGCAACCTTTGCCTTCTTCAGAAGCTTGGAAATCGACACACAAAACAGTGCACATTTAGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS GCA 90 bp TGGATATTCATCAGGATACCCAGGAGAATAAATGGTGCCATTCATTaGAGTTATATTCCCACCACAAAGAGCTTCACACCTTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: WIFIRIPRRINGAIH*SYIPTTKSFTPWKW
Trigger: CCACTTCCAAGGTGTGAAGCTCTTTGTGGTGGGAATATAACTGCAATGAATGGCACCATTTATTCTCCTGGGTATCCTGATGAATATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS GCA 90 bp ACTGTTTTGTGTGTCGATTTCCAAGCTTCTGAAGAAGGCAAAGGTTaGCTCGTTATACCATTGTGCAAACCGTGTTCAAGTTGGGATCAA +
Preference number: 5 (lower is better)
Translates to: TVLCVDFQASEEGKG*LVIPLCKPCSSWDQ
Trigger: TTGATCCCAACTTGAACACGGTTTGCACAATGGTATAACGAGGCAACCTTTGCCTTCTTCAGAAGCTTGGAAATCGACACACAAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CCA 90 bp ATTTCCATACCCTTCTGGGTAATCAGGAGAAAGAACTGTTCCCATTaGTGCAGTAAAGTTAGACAGGCAGGGAAAGATACAGATGGGTAT +
Preference number: 5 (lower is better)
Translates to: ISIPFWVIRRKNCSH*CSKVRQAGKDTDGY
Trigger: ATACCCATCTGTATCTTTCCCTGCCTGTCTAACTTTACTGCACCAATGGGAACAGTTCTTTCTCCTGATTACCCAGAAGGGTATGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp TACCTGAATGCAGGTTATTCTTTCCTCTCCTTGAAGTTCATATCCTaGGTCACATTGAAAAACAACAGTGTCCCCAGGTTCTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: YLNAGYSFLSLKFIS*VTLKNNSVPRFSSI
Trigger: GATGGAAGAGAACCTGGGGACACTGTTGTTTTTCAATGTGACCCAGGATATGAACTTCAAGGAGAGGAAAGAATAACCTGCATTCAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp TGTACAAGTCCTGATTCTGGAGCCATTCAATTCCATCGTGTAGCCTaGCTGGCACATGTAAGAAACATTTTGTCCAACCACATAATCATC +
Preference number: 5 (lower is better)
Translates to: CTSPDSGAIQFHRVA*LAHVRNILSNHIII
Trigger: GATGATTATGTGGTTGGACAAAATGTTTCTTACATGTGCCAGCCAGGCTACACGATGGAATTGAATGGCTCCAGAATCAGGACTTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGGGTTTGGATTCCTTaGCTCGGCTTTCCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKERVWIP*LGFPLC
Trigger: GCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACACAGATTTGGTACTaGTCACTGGAGGTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETQIWY*SLEVAD
Trigger: ATCTGCCACCTCCAGTGACAAGTACCAAATCTGTGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCCCGACGTCGAATCTaGTGCCATATAATACACCTT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPRRRI*CHIIHL
Trigger: AAGGTGTATTATATGGCACAAGATTCGACGTCGGGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCTTCTCCTGGTACTTaGTGTATCTGCTGGATGAGG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESSPGT*CICWMR
Trigger: CCTCATCCAGCAGATACACAAAGTACCAGGAGAAGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAACTTCAGCTATCCGTaGACAGGTGATGCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENFSYP*TGDALC
Trigger: GCAAAGAGCATCACCTGTCAACGGATAGCTGAAGTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACAGACACATTGTGCATaGCTGTCATACTGGAACGGA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEQTHCA*LSYWNG
Trigger: TCCGTTCCAGTATGACAGCAATGCACAATGTGTCTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGATGACCCAGACACATaGTGCATTGCTGTCATACTG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEDDPDT*CIAVIL
Trigger: CAGTATGACAGCAATGCACAATGTGTCTGGGTCATC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGGGTGACAGAAGATTaGGCCCATCATGAACTTCCA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERVTED*AHHELP
Trigger: TGGAAGTTCATGATGGGCCAAATCTTCTGTCACCCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATAATGCATCACAGGTaGGAAGTGGATGACTCCACC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEIMHHR*EVDDST
Trigger: GGTGGAGTCATCCACTTCCAACCTGTGATGCATTAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCAGGCGTGCCAGTGGTaGGGTAAAACTGCCATTCTC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNQACQW*GKTAIL
Trigger: GAGAATGGCAGTTTTACCCAACCACTGGCACGCCTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGATTCGACTACCATATaGAGGAATGCCAGGATCTTC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEDSTTI*RNARIF
Trigger: GAAGATCCTGGCATTCCTCAATATGGTAGTCGAATC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTCCTTCATTATTCGTaGCAGATGCACCACATTCAG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSFLHYS*QMHHIQ
Trigger: CTGAATGTGGTGCATCTGCAACGAATAATGAAGGAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGATCTTGTATCCAAATaGTGGAATGCCAGGATCTTC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSDLVSK*WNARIF
Trigger: GAAGATCCTGGCATTCCACAATTTGGATACAAGATC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATATCCTGGGTCACATaGAAAAACAACAGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEISWVT*KNNSVP
Trigger: GGGGACACTGTTGTTTTTCAATGTGACCCAGGATAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGAAGATCCTGTTAAATaGCCTCCACAGGGTGCTATA +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEEDPVK*PPQGAI
Trigger: TATAGCACCCTGTGGAGGCAATTTAACAGGATCTTC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGGGCGCATGACAACTaGGCAAGGCTCTATTCCATC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKERAHDN*ARLYSI
Trigger: GATGGAATAGAGCCTTGCCAAGTTGTCATGCGCCCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGCCTTCTGAACCTGTaGAACGACTTCCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCLLNL*NDFHRA
Trigger: CGCCCTGTGGAAGTCGTTCAACAGGTTCAGAAGGCA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTCTTCTTCCGAATCTaGGTTCAGGCACAGAACTGC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEFFFRI*VQAQNC
Trigger: GCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGCAAAGCTAACAACTaGCACTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESKANN*HLNASS
Trigger: GGAGCTGGCATTCAAGTGCAAGTTGTTAGCTTTGCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAATAGCTTCCAAGTCTaGGAGCATTGTTGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHENSFQV*EHCCLP
Trigger: GGGGAGACAACAATGCTCCAAGACTTGGAAGCTATT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGGATCAGGACAGCTTaGCAACTGATAGGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEWIRTA*QLIGLV
Trigger: TACCAAGCCTATCAGTTGCAAAGCTGTCCTGATCCA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAATGGTGCCATTCATaGCAGTTATATTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKWCHS*QLYSHH
Trigger: GTGGTGGGAATATAACTGCAATGAATGGCACCATTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGAATCCCACAGGAAATaGCTTGACAGGCAGGGACTG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEESHRK*LDRQGL
Trigger: CAGTCCCTGCCTGTCAAGCAATTTCCTGTGGGATTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCAGGATCAGAACAGTaGACCACTTTGCACATAGGT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPGSEQ*TTLHIG
Trigger: ACCTATGTGCAAAGTGGTCAACTGTTCTGATCCTGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCATTCTGGTAAAGGTTaGTCCCATTGTCCATTTGGT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSHSGKG*SHCPFG
Trigger: ACCAAATGGACAATGGGACAAACCTTTACCAGAATG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCAATTGGCAGGTTCTaGATGACTGGCCTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESIGRF*MTGLKG
Trigger: CCCTTTTAGGCCAGTCATCAAGAACCTGCCAATTGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCGGAAGACTTTCCCATaGGCTGTGGTTCCTGGGTTA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKERKTFP*AVVPGL
Trigger: TAACCCAGGAACCACAGCCAATGGGAAAGTCTTCCG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGTCACCACAAAACTTaGGTAAGCACTGCGGTACTT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGHHKT*VSTAVL
Trigger: AAGTACCGCAGTGCTTACCAAAGTTTTGTGGTGACC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCCTTCTCTTTTTCCTaGGGCAGGTATACCAGGGTC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEAFSFS*GRYTRV
Trigger: GACCCTGGTATACCTGCCCAAGGAAAAAGAGAAGGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCAGGAACACTTAGCTTaGGGCTGGGTGTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNQEHLA*GWVFPV
Trigger: CACTGGGAACACCCAGCCCAAAGCTAAGTGTTCCTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTCCCAGTGGAAGCATaGAAACTAGTAACTGTTAAG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLPVEA*KLVTVK
Trigger: CTTAACAGTTACTAGTTTCAATGCTTCCACTGGGAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAGCTCCATGTTGCTATaGCTCAGTGTTGCGTTAACT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESSMLL*LSVALT
Trigger: AGTTAACGCAACACTGAGCAATAGCAACATGGAGCT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATGCCTCGTTATACCATaGTGCAAACCGTGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPECLVIP*CKPCSS
Trigger: ACTTGAACACGGTTTGCACAATGGTATAACGAGGCA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGGTAGCACAATGAACTaGCCCTTTGCAGAAACTATG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEGSTMN*PFAETM
Trigger: CATAGTTTCTGCAAAGGGCAAGTTCATTGTGCTACC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp CATATCATTTTCTGGTGGACCGTCCCAGACTCGGAGTATATCATGTaGTGCTTCCGTATCAAAAGCAAGAAACTGCAAGCTGACAATATT +
Preference number: 5 (lower is better)
Translates to: HIIFWWTVPDSEYIM*CFRIKSKKLQADNI
Trigger: AATATTGTCAGCTTGCAGTTTCTTGCTTTTGATACGGAAGCATCACATGATATACTCCGAGTCTGGGACGGTCCACCAGAAAATGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp CCCTTAGCTGTTATTGGTCCAACTGAAGTAAATCGAATTGTGATCTaGTTACCTGAACTCAGTGGAAGTGATTCTCCTGAATGGGATCCT +
Preference number: 5 (lower is better)
Translates to: PLAVIGPTEVNRIVI*LPELSGSDSPEWDP
Trigger: AGGATCCCATTCAGGAGAATCACTTCCACTGAGTTCAGGTAATCAGATCACAATTCGATTTACTTCAGTTGGACCAATAACAGCTAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp ACTGTTAAGCTGCCCACCTGTCTGACTGATAATATATCCATGAGGTaGGGATTCTGGTGTACTACAGTAGAAAGCTATATATCTTATCCG +
Preference number: 5 (lower is better)
Translates to: TVKLPTCLTDNISMR*GFWCTTVESYISYP
Trigger: CGGATAAGATATATAGCTTTCTACTGTAGTACACCAGAATCCCCACCTCATGGATATATTATCAGTCAGACAGGTGGGCAGCTTAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCTCGGCTTTCCCCTTaGCGGATCCCTTTCATATTA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEARLSP*RIPFIL
Trigger: TAATATGAAAGGGATCCGCAAAGGGGAAAGCCGAGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTACCCATGTGCAGTTaGCACCATTTGGATATCCAT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELPMCS*HHLDIH
Trigger: ATGGATATCCAAATGGTGCAAACTGCACATGGGTAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCATATAATACACCTTaGGGTGGAACACCAGGATTT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPYNTP*GGTPGF
Trigger: AAATCCTGGTGTTCCACCCAAAGGTGTATTATATGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATACTGGAACGGAAAGTaGGGAGATGTAAAGGTACCA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEYWNGK*GDVKVP
Trigger: TGGTACCTTTACATCTCCCAACTTTCCGTTCCAGTA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTACAGATGGGTATGTTaGCAGACCATTGGTTATTCT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSYRWVC*QTIGYS
Trigger: AGAATAACCAATGGTCTGCAAACATACCCATCTGTA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCCAAACCGCCGTGCATaGATTGGTATTCCAGGATCA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEPNRRA*IGIPGS
Trigger: TGATCCTGGAATACCAATCAATGCACGGCGGTTTGG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATGGGGCTCCACATTTaGGAATCAGTCCACTCCACA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEMGLHI*ESVHST
Trigger: TGTGGAGTGGACTGATTCCAAAATGTGGAGCCCCAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGATTCGACTACCATATaGAGGAATGCCAGGATCTTC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEDSTTI*RNARIF
Trigger: GAAGATCCTGGCATTCCTCAATATGGTAGTCGAATC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTCCTTCATTATTCGTaGCAGATGCACCACATTCAG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEFLHYS*QMHHIQ
Trigger: CTGAATGTGGTGCATCTGCAACGAATAATGAAGGAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACCAGCAAAGTGGCCTaGGTCACTGATCTTGTATCC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKETSKVA*VTDLVS
Trigger: GGATACAAGATCAGTGACCAAGGCCACTTTGCTGGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGGGCGCATGACAACTaGGCAAGGCTCTATTCCATC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRAHDN*ARLYSI
Trigger: GATGGAATAGAGCCTTGCCAAGTTGTCATGCGCCCT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCGACTGCAAATTCATaGCCAATTCTTCTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPTANS*PILLPN
Trigger: ATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCACTGGGCCAAAGAATaGGGCACTGTTTCACACCTA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEHWAKE*GTVSHL
Trigger: TAGGTGTGAAACAGTGCCCAATTCTTTGGCCCAGTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAAGATGGGGTATTGTaGTTCCTGAATAGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKDGVL*FLNSFQ
Trigger: TTGGAAGCTATTCAGGAACAACAATACCCCATCTTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCCACTGCTAGGAGTTaGTGGTTCAGGACAGGAATC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESTARS*WFRTGI
Trigger: GATTCCTGTCCTGAACCACAAACTCCTAGCAGTGGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTGAAGAGAATATCCTaGATCACACTGAAAGGATAC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLKRIS*ITLKGY
Trigger: GTATCCTTTCAGTGTGATCAAGGATATTCTCTTCAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTTGCAACTGATAGGCTaGGTATACAATATGAAACCC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLQLIG*VYNMKP
Trigger: GGGTTTCATATTGTATACCAAGCCTATCAGTTGCAA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTGTTCTTCCATAAATaGGACTACCAGGGTGACCAC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELFFHK*DYQGDH
Trigger: GTGGTCACCCTGGTAGTCCAATTTATGGAAGAACAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGAACAGTTGACCACTTaGCACATAGGTGGAGGATGG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEEQLTT*HIGGGW
Trigger: CCATCCTCCACCTATGTGCAAAGTGGTCAACTGTTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACATTCTGGTAAAGGTTaGTCCCATTGTCCATTTGGT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEHSGKG*SHCPFG
Trigger: ACCAAATGGACAATGGGACAAACCTTTACCAGAATG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTTTTAGTTCTGAAATaGCTTTCCTGTCTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLLVLK*LSCLEP
Trigger: TGGCTCTAGACAGGAAAGCAATTTCAGAACTAAAAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCGGAAGACTTTCCCATaGGCTGTGGTTCCTGGGTTA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRKTFP*AVVPGL
Trigger: TAACCCAGGAACCACAGCCAATGGGAAAGTCTTCCG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGCCCCAGTCGAAATTaGTTCCTTCCAGCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESPSRN*FLPAFH
Trigger: ATGGAAGGCTGGAAGGAACAAATTTCGACTGGGGCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGCCTTCTCTTTTTCCTaGGGCAGGTATACCAGGGTC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNAFSFS*GRYTRV
Trigger: GACCCTGGTATACCTGCCCAAGGAAAAAGAGAAGGC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGAAGGTGTCCTTTTTaGCAATGGAACTGTACAACA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRRCPF*QWNCTT
Trigger: TGTTGTACAGTTCCATTGCAAAAAAGGACACCTTCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAAACAAAGCCATCCATaGCCCAATTTTCTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSKQSHP*PNFLPS
Trigger: TGAAGGAAGAAAATTGGGCAATGGATGGCTTTGTTT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCAAACCGTGTTCAAGTaGGGATCAAATCGTACCGCC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEQTVFK*GSNRTA
Trigger: GGCGGTACGATTTGATCCCAACTTGAACACGGTTTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGGTAGCACAATGAACTaGCCCTTTGCAGAAACTATG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEGSTMN*PFAETM
Trigger: CATAGTTTCTGCAAAGGGCAAGTTCATTGTGCTACC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp AAATTGAACTTCCTAATTGAAAGTTGTCCCCAAACCGCCGTGCATTaGTTGGTATTCCAGGATCAGGGCATTCATTATGTCCAAATGTGT +
Preference number: 5 (lower is better)
Translates to: KLNFLIESCPQTAVH*LVFQDQGIHYVQMC
Trigger: ACACATTTGGACATAATGAATGCCCTGATCCTGGAATACCAATCAATGCACGGCGGTTTGGGGACAACTTTCAATTAGGAAGTTCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp TGGTATTTGAGGACCACTAAGCCGGCCAATAACAGTACTAGTTTCTaGGGATCCACTTCGTACTTCCAAATAATCATGTATGGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: WYLRTTKPANNSTSF*GSTSYFQIIMYGFC
Trigger: ACAGAAACCATACATGATTATTTGGAAGTACGAAGTGGATCCTCAGAAACTAGTACTGTTATTGGCCGGCTTAGTGGTCCTCAAATACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp GCACTGTGCCTTTGTTGGCCCTTGCATAAGATACCCAATATTGCATaGGAATGTTACCACATCATTAAAGTTGAACCCATTTCCACTTGT +
Preference number: 5 (lower is better)
Translates to: ALCLCWPLHKIPNIA*ECYHIIKVEPISTC
Trigger: ACAAGTGGAAATGGGTTCAACTTTAATGATGTGGTAACATTCTCATGCAATATTGGGTATCTTATGCAAGGGCCAACAAAGGCACAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp AACAAAACCCAAGAAAACAGTGAGTCAAACAGCCAGACGCAAATATaGATCAAACTCTGCCAGCAGCAGTTTCGACTTCTAATCAAACAG +
Preference number: 5 (lower is better)
Translates to: NKTQENSESNSQTQI*IKLCQQQFRLLIKQ
Trigger: CTGTTTGATTAGAAGTCGAAACTGCTGCTGGCAGAGTTTGATTCATATTTGCGTCTGGCTGTTTGACTCACTGTTTTCTTGGGTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493303.1
CDS TCA 90 bp GAAAATGAAAGCTGTTTTTCTAGAATACTGTTGACCAAGGGATGGTaGTGTCAGGCTGTTCTGGCCAATGATATAGGAGAAGAATCCTTC +
Preference number: 5 (lower is better)
Translates to: ENESCFSRILLTKGW*CQAVLANDIGEESF
Trigger: GAAGGATTCTTCTCCTATATCATTGGCCAGAACAGCCTGACATCACCATCCCTTGGTCAACAGTATTCTAGAAAAACAGCTTTCATTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493303.1
CDS GCA 90 bp CCAAATGCATTGTATTTGAGCTGCTTTCTATTCTCTCTGGTAACTTaGTGTCTTGAAAACTTCCAATCAGTGGGCTATTACTGTCTGGTC +
Preference number: 5 (lower is better)
Translates to: PNALYLSCFLFSLVT*CLENFQSVGYYCLV
Trigger: GACCAGACAGTAATAGCCCACTGATTGGAAGTTTTCAAGACAGCAAGTTACCAGAGAGAATAGAAAGCAGCTCAAATACAATGCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp CTGGATTACAATCAAAAAGAACCGATGAACCGACTGCAAATTCATTaGCAATTCTTCTTCCGAATCTTGGTTCAGGCACAGAACTGCATT +
Preference number: 5 (lower is better)
Translates to: LDYNQKEPMNRLQIH*QFFFRILVQAQNCI
Trigger: AATGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCGGTTCATCGGTTCTTTTTGATTGTAATCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp CTTGAAAGTTTGGATATTCATCAGGATACCCAGGAGAATAAATGGTaGCATTCATTGCAGTTATATTCCCACCACAAAGAGCTTCACACC +
Preference number: 5 (lower is better)
Translates to: LESLDIHQDTQENKW*HSLQLYSHHKELHT
Trigger: GGTGTGAAGCTCTTTGTGGTGGGAATATAACTGCAATGAATGGCACCATTTATTCTCCTGGGTATCCTGATGAATATCCAAACTTTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATGCAGTTTGCACCATTaGGATATCCATATGGAAAAC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPECSLHH*DIHMEN
Trigger: GTTTTCCATATGGATATCCAAATGGTGCAAACTGCA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACACAGATTTGGTACTaGTCACTGGAGGTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKETQIWY*SLEVAD
Trigger: ATCTGCCACCTCCAGTGACAAGTACCAAATCTGTGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCTTCTCCTGGTACTTaGTGTATCTGCTGGATGAGG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESSPGT*CICWMR
Trigger: CCTCATCCAGCAGATACACAAAGTACCAGGAGAAGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGAAAACTTGTTGCTGTaGTCTTTCCCTGGAAACAAT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEENLLL*SFPGNN
Trigger: ATTGTTTCCAGGGAAAGACAACAGCAACAAGTTTTC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCATTGGTTATTCTCTaGACAAACAATGGATTTCTC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPLVIL*TNNGFL
Trigger: GAGAAATCCATTGTTTGTCAAGAGAATAACCAATGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTTATGTTTGCAGACCATaGGTTATTCTCTTGACAAAC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSYVCRP*VILLTN
Trigger: GTTTGTCAAGAGAATAACCAATGGTCTGCAAACATA...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCAAACCGCCGTGCATaGATTGGTATTCCAGGATCA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPNRRA*IGIPGS
Trigger: TGATCCTGGAATACCAATCAATGCACGGCGGTTTGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATGGGGCTCCACATTTaGGAATCAGTCCACTCCACA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNMGLHI*ESVHST
Trigger: TGTGGAGTGGACTGATTCCAAAATGTGGAGCCCCAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGGGTGACAGAAGATTaGGCCCATCATGAACTTCCA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKERVTED*AHHELP
Trigger: TGGAAGTTCATGATGGGCCAAATCTTCTGTCACCCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATAATGCATCACAGGTaGGAAGTGGATGACTCCACC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIMHHR*EVDDST
Trigger: GGTGGAGTCATCCACTTCCAACCTGTGATGCATTAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGATTCCCTTTCCTGCTaGAACCTGAATACTATAAAT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSDSLSC*NLNTIN
Trigger: ATTTATAGTATTCAGGTTCAAGCAGGAAAGGGAATC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGATCTTGTATCCAAATaGTGGAATGCCAGGATCTTC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEDLVSK*WNARIF
Trigger: GAAGATCCTGGCATTCCACAATTTGGATACAAGATC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCTTGGTCACTGATCTaGTATCCAAATTGTGGAATG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPWSLI*YPNCGM
Trigger: CATTCCACAATTTGGATACAAGATCAGTGACCAAGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACACCAGCAAAGTGGCCTaGGTCACTGATCTTGTATCC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNTSKVA*VTDLVS
Trigger: GGATACAAGATCAGTGACCAAGGCCACTTTGCTGGT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCCAAATGCATTGTATTaGAGCTGCTTTCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSPNALY*SCFLFS
Trigger: AGAGAATAGAAAGCAGCTCAAATACAATGCATTTGG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTTCTTCTTCCGAATCTaGGTTCAGGCACAGAACTGC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEFFFRI*VQAQNC
Trigger: GCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGAA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGCAAAGCTAACAACTaGCACTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESKANN*HLNASS
Trigger: GGAGCTGGCATTCAAGTGCAAGTTGTTAGCTTTGCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAATAGCTTCCAAGTCTaGGAGCATTGTTGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKENSFQV*EHCCLP
Trigger: GGGGAGACAACAATGCTCCAAGACTTGGAAGCTATT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAAGATGGGGTATTGTaGTTCCTGAATAGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKDGVL*FLNSFQ
Trigger: TTGGAAGCTATTCAGGAACAACAATACCCCATCTTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCAAAAGATGGGGTATaGTTGTTCCTGAATAGCTTC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESKDGV*LFLNSF
Trigger: GAAGCTATTCAGGAACAACAATACCCCATCTTTTGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTAGGAATCCAAACCAATaGCTGTGTATTCAAGATGAA +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSRNPNQ*LCIQDE
Trigger: TTCATCTTGAATACACAGCAATTGGTTTGGATTCCT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCCACTGCTAGGAGTTaGTGGTTCAGGACAGGAATC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSTARS*WFRTGI
Trigger: GATTCCTGTCCTGAACCACAAACTCCTAGCAGTGGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTACTGAGCTAAACAAATaGGGATTGGATAATTCCATC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSTELNK*GLDNSI
Trigger: GATGGAATTATCCAATCCCAATTTGTTTAGCTCAGT...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTATGGGTAGATTTATaGTCCATGTGCAATCTAAAC +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLWVDL*SMCNLN
Trigger: GTTTAGATTGCACATGGACAATAAATCTACCCATAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTGCAACTGATAGGCTaGGTATACAATATGAAACCC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELQLIG*VYNMKP
Trigger: GGGTTTCATATTGTATACCAAGCCTATCAGTTGCAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGGATCAGGACAGCTTaGCAACTGATAGGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEWIRTA*QLIGLV
Trigger: TACCAAGCCTATCAGTTGCAAAGCTGTCCTGATCCA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGTCAAAATTTCAGCATaGGGCACAGGTGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNVKISA*GTGGGG
Trigger: ACCTCCACCACCTGTGCCCAATGCTGAAATTTTGAC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCTACCAAATAGTCTGTaGTTAGTATTCCTCCATTTG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSLPNSL*LVFLHL
Trigger: CAAATGGAGGAATACTAACAACAGACTATTTGGTAG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTTTCTCTTTTAGAATaGGCTGGAATTCCAGGATCA +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELSLLE*AGIPGS
Trigger: TGATCCTGGAATTCCAGCCAATTCTAAAAGAGAAAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATGTCCCATTGTCCATTaGGTTGACATATCAAAACTG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPECPIVH*VDISKL
Trigger: CAGTTTTGATATGTCAACCAAATGGACAATGGGACA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCAATTGGCAGGTTCTaGATGACTGGCCTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESIGRF*MTGLKG
Trigger: CCCTTTTAGGCCAGTCATCAAGAACCTGCCAATTGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCATATCTCAGTCCATaGGCTGGTATACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPYLSP*AGIPGS
Trigger: AGACCCAGGTATACCAGCCAATGGACTGAGATATGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGGTCACCACAAAACTTaGGTAAGCACTGCGGTACTT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEGHHKT*VSTAVL
Trigger: AAGTACCGCAGTGCTTACCAAAGTTTTGTGGTGACC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCATCCCTACGACATTaGCATGAGCAGGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPSLRH*HEQEFL
Trigger: CAGAAACTCCTGCTCATGCAAATGTCGTAGGGATGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTCCCAGTGGAAGCATaGAAACTAGTAACTGTTAAG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELPVEA*KLVTVK
Trigger: CTTAACAGTTACTAGTTTCAATGCTTCCACTGGGAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAACAAAGCCATCCATaGCCCAATTTTCTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKQSHP*PNFLPS
Trigger: TGAAGGAAGAAAATTGGGCAATGGATGGCTTTGTTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCAAACCGTGTTCAAGTaGGGATCAAATCGTACCGCC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNQTVFK*GSNRTA
Trigger: GGCGGTACGATTTGATCCCAACTTGAACACGGTTTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTGAAGTCAGTGATCTATaGACTCTTGTAAGTATAGCT +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSEVSDL*TLVSIA
Trigger: AGCTATACTTACAAGAGTCAATAGATCACTGACTTC...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp ACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGTCAGAGTTATCCATATTaGAAAGGGACAACAACAAAG +
Preference number: 5 (lower is better)
Translates to: TLFCIIPQEKVTQQVLKSQSYPY*KGTTTK
Trigger: CTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTG...ACTTTTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAAAGAGGAGTAGCCAGTaGCAGAAGAAACATTGTTTA +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEKRSSQ*QKKHCL
Trigger: TAAACAATGTTTCTTCTGCAACTGGCTACTCCTCTT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATATGGCCTTTTTCACTaGATAGGGAGCACTAAATCC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEYGLFH*IGSTKS
Trigger: GGATTTAGTGCTCCCTATCAAGTGAAAAAGGCCATA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455883.2
CDS GCA 90 bp AAGAAAGATGTATCCGGCTCCCTGGATCAGAGATTATCGTCCAGATaGAATTTAAATTATTTCCATACCCTTCTGGGTAATCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: KKDVSGSLDQRLSSR*NLNYFHTLLGNQEK
Trigger: TTTCTCCTGATTACCCAGAAGGGTATGGAAATAATTTAAATTGCATCTGGACGATAATCTCTGATCCAGGGAGCCGGATACATCTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp CACAGTAAAATCATTACCAATTACAAAACCATTTCGAAACGGGCGTaGATCAGGACAGCTTTGCAACTGATAGGCTTGGTATACAATATG +
Preference number: 5 (lower is better)
Translates to: HSKIITNYKTISKRA*IRTALQLIGLVYNM
Trigger: CATATTGTATACCAAGCCTATCAGTTGCAAAGCTGTCCTGATCCACGCCCGTTTCGAAATGGTTTTGTAATTGGTAATGATTTTACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCACTGGATCCTCTCATaGTTCCTCCACAAGCATCTT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNHWILS*FLHKHL
Trigger: AAGATGCTTGTGGAGGAACAATGAGAGGATCCAGTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAGATAGAAAACTTGTaGCTGTTGTCTTTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKIENL*LLSFPG
Trigger: TCCAGGGAAAGACAACAGCAACAAGTTTTCTATCTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTACTGGAACGGAAAGTaGGGAGATGTAAAGGTACCA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEYWNGK*GDVKVP
Trigger: TGGTACCTTTACATCTCCCAACTTTCCGTTCCAGTA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCAGACACATTGTGCATaGCTGTCATACTGGAACGGA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNQTHCA*LSYWNG
Trigger: TCCGTTCCAGTATGACAGCAATGCACAATGTGTCTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAGGTGCAGCCACATTaGGCTACTCATGCTCACTAT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKVQPH*ATHAHY
Trigger: ATAGTGAGCATGAGTAGCCAAATGTGGCTGCACCTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAACACTTTCGTCCGTTaGAAGGTGCAGCCACATTTG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNNTFVR*KVQPHL
Trigger: CAAATGTGGCTGCACCTTCAAACGGACGAAAGTGTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATATGTTTGCAGACCATaGGTTATTCTCTTGACAAAC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEYVCRP*VILLTN
Trigger: GTTTGTCAAGAGAATAACCAATGGTCTGCAAACATA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATACAGATGGGTATGTTaGCAGACCATTGGTTATTCT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEYRWVC*QTIGYS
Trigger: AGAATAACCAATGGTCTGCAAACATACCCATCTGTA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGGGTGACAGAAGATTaGGCCCATCATGAACTTCCA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRVTED*AHHELP
Trigger: TGGAAGTTCATGATGGGCCAAATCTTCTGTCACCCT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATTATTGGAACGACTGTaGTCTGTTGTAAATAGAAGG +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELLERL*SVVNRR
Trigger: CCTTCTATTTACAACAGACAACAGTCGTTCCAATAA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATCTTGAAACCATTATaGGAACGACTGTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEILKPL*ERLLSV
Trigger: AACAGACAACAGTCGTTCCAATAATGGTTTCAAGAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATAATGCATCACAGGTaGGAAGTGGATGACTCCACC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIMHHR*EVDDST
Trigger: GGTGGAGTCATCCACTTCCAACCTGTGATGCATTAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGATTCCCTTTCCTGCTaGAACCTGAATACTATAAAT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEDSLSC*NLNTIN
Trigger: ATTTATAGTATTCAGGTTCAAGCAGGAAAGGGAATC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACTGGTATACACAAGTaGAAAGCCTTCATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKETGIHK*KAFICP
Trigger: GGGACAGATGAAGGCTTTCAACTTGTGTATACCAGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGAAGATCCTGTTAAATaGCCTCCACAGGGTGCTATA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEEDPVK*PPQGAI
Trigger: TATAGCACCCTGTGGAGGCAATTTAACAGGATCTTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACCAAATGCATTGTATTaGAGCTGCTTTCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEPNALY*SCFLFS
Trigger: AGAGAATAGAAAGCAGCTCAAATACAATGCATTTGG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGGACTCTCGCAGTTTaGCTTTGTATTCTAGATGAA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERTLAV*LCILDE
Trigger: TTCATCTAGAATACAAAGCAAAACTGCGAGAGTCCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATGTTCTAGGAACAGCTaGGTAAACAAAGTGAAATCC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHECSRNS*VNKVKS
Trigger: GGATTTCACTTTGTTTACCAAGCTGTTCCTAGAACA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGGCACAGAACTGCATaGTGTAGAACTTGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKERHRTA*CRTCSR
Trigger: CCTAGAACAAGTTCTACACAATGCAGTTCTGTGCCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATCAAAAGATGGGGTATaGTTGTTCCTGAATAGCTTC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHESKDGV*LFLNSF
Trigger: GAAGCTATTCAGGAACAACAATACCCCATCTTTTGA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTGAAGAGAATATCCTaGATCACACTGAAAGGATAC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELKRIS*ITLKGY
Trigger: GTATCCTTTCAGTGTGATCAAGGATATTCTCTTCAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAACTGAGCTAAACAAATaGGGATTGGATAATTCCATC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPETELNK*GLDNSI
Trigger: GATGGAATTATCCAATCCCAATTTGTTTAGCTCAGT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAACTATGGGTAGATTTATaGTCCATGTGCAATCTAAAC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPELWVDL*SMCNLN
Trigger: GTTTAGATTGCACATGGACAATAAATCTACCCATAG...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATTGCAACTGATAGGCTaGGTATACAATATGAAACCC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELQLIG*VYNMKP
Trigger: GGGTTTCATATTGTATACCAAGCCTATCAGTTGCAA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACACACATTTGAAGATTaGGGTAACTGTCAGGATATC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEHTFED*GNCQDI
Trigger: GATATCCTGACAGTTACCCAAATCTTCAAATGTGTG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTGGACTTTGAATATTaGGTCCATCATACACCTGAA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELDFEY*VHHTPE
Trigger: TTCAGGTGTATGATGGACCAAATATTCAAAGTCCAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAATCCAAGATAAAGGAATaGATGCTTGGACATGTAACA +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPESKIKE*MLGHVT
Trigger: TGTTACATGTCCAAGCATCAATTCCTTTATCTTGGA...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAATTTTCTCCAATGACTaGACCATTCACAATCAGTTC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEIFSND*TIHNQF
Trigger: GAACTGATTGTGAATGGTCAAGTCATTGGAGAAAAT...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCAGGATCAGAACAGTaGACCACTTTGCACATAGGT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPGSEQ*TTLHIG
Trigger: ACCTATGTGCAAAGTGGTCAACTGTTCTGATCCTGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTTTCTCTTTTAGAATaGGCTGGAATTCCAGGATCA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELSLLE*AGIPGS
Trigger: TGATCCTGGAATTCCAGCCAATTCTAAAAGAGAAAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCAATTGGCAGGTTCTaGATGACTGGCCTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSIGRF*MTGLKG
Trigger: CCCTTTTAGGCCAGTCATCAAGAACCTGCCAATTGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGGTCACCACAAAACTTaGGTAAGCACTGCGGTACTT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNGHHKT*VSTAVL
Trigger: AAGTACCGCAGTGCTTACCAAAGTTTTGTGGTGACC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGCCTTGAATAAATCCTaGAAATACATAAGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEALNKS*KYISSS
Trigger: GGAGCTACTTATGTATTTCAAGGATTTATTCAAGGC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCCACTGACTTTGCGTaGGTGTCATACATGGGATTT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESTDFA*VSYMGF
Trigger: AAATCCCATGTATGACACCAACGCAAAGTCAGTGGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTGCCTCGTTATACCATaGTGCAAACCGTGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKECLVIP*CKPCSS
Trigger: ACTTGAACACGGTTTGCACAATGGTATAACGAGGCA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAAAACACTCTTCTGTATCATTCCTCAGGAAAAGGTGACCCAGCAAGTCCTGAAGAAGTCAGTGATCTATaGACTCTTGTAAGTATAGCT +
Preference number: 5 (lower is better)
Translates to: KNTLLYHSSGKGDPASPEEVSDL*TLVSIA
Trigger: AGCTATACTTACAAGAGTCAATAGATCACTGACTTC...TTCAGGACTTGCTGGGTCACCTTTTCCTGAGGAATGATACAGAAGAGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAAGAGGAGTAGCCAGTaGCAGAAGAAACATTGTTTA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEKRSSQ*QKKHCL
Trigger: TAAACAATGTTTCTTCTGCAACTGGCTACTCCTCTT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp CTGGAAGAATTCTACAAACATGGTGATATTATAACCCTTTTCCACTaGAATGCTCCATGCACACATTTGAAGATTTGGGTAACTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LEEFYKHGDIITLFH*NAPCTHLKIWVTVR
Trigger: CCTGACAGTTACCCAAATCTTCAAATGTGTGCATGGAGCATTTCAGTGGAAAAGGGTTATAATATCACCATGTTTGTAGAATTCTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CCA 90 bp AACCATATATCTGTCTCCAATTTTAATTCCACTGCTAGGAGTTTGTaGTTCAGGACAGGAATCCAAACCAATTGCTGTGTATTCAAGATG +
Preference number: 5 (lower is better)
Translates to: NHISVSNFNSTARSL*FRTGIQTNCCVFKM
Trigger: CATCTTGAATACACAGCAATTGGTTTGGATTCCTGTCCTGAACCACAAACTCCTAGCAGTGGAATTAAAATTGGAGACAGATATATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 90 bp AATCTTGAAAGTTTGGATATTCATCAGGATACCCAGGAGAATAAATaGTGCCATTCATTGCAGTTATATTCCCACCACAAAGAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: NLESLDIHQDTQENK*CHSLQLYSHHKELH
Trigger: GTGAAGCTCTTTGTGGTGGGAATATAACTGCAATGAATGGCACCATTTATTCTCCTGGGTATCCTGATGAATATCCAAACTTTCAAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTGAGCCAGTTTTTGTaGCTGATAATTGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLSQFL*LIIGGG
Trigger: ACCACCACCAATTATCAGCAACAAAAACTGGCTCAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGTCTGAGCCAGTTTTaGTTGCTGATAATTGGTGGT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESLSQF*LLIIGG
Trigger: ACCACCAATTATCAGCAACAAAAACTGGCTCAGACT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACCATTGGTTATTCTCTaGACAAACAATGGATTTCTC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEPLVIL*TNNGFL
Trigger: GAGAAATCCATTGTTTGTCAAGAGAATAACCAATGG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAATCTTGAAACCATTATaGGAACGACTGTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEILKPL*ERLLSV
Trigger: AACAGACAACAGTCGTTCCAATAATGGTTTCAAGAT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACACTGGTATACACAAGTaGAAAGCCTTCATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNTGIHK*KAFICP
Trigger: GGGACAGATGAAGGCTTTCAACTTGTGTATACCAGT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGATCTTGTATCCAAATaGTGGAATGCCAGGATCTTC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEDLVSK*WNARIF
Trigger: GAAGATCCTGGCATTCCACAATTTGGATACAAGATC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATATCCTGGGTCACATaGAAAAACAACAGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNISWVT*KNNSVP
Trigger: GGGGACACTGTTGTTTTTCAATGTGACCCAGGATAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGGCACAGAACTGCATaGTGTAGAACTTGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRHRTA*CRTCSR
Trigger: CCTAGAACAAGTTCTACACAATGCAGTTCTGTGCCT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCCGACTGCAAATTCATaGCCAATTCTTCTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEPTANS*PILLPN
Trigger: ATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCGG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGACAAAATAGTCCCTTaGCGCTTAGTTAAAATTCCA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEDKIVP*RLVKIP
Trigger: TGGAATTTTAACTAAGCGCAAAGGGACTATTTTGTC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAAGGAATCCAAACCAATaGCTGTGTATTCAAGATGAA +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHERNPNQ*LCIQDE
Trigger: TTCATCTTGAATACACAGCAATTGGTTTGGATTCCT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAACTACCAAATAGTCTGTaGTTAGTATTCCTCCATTTG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHELPNSL*LVFLHL
Trigger: CAAATGGAGGAATACTAACAACAGACTATTTGGTAG...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTGTTCTTCCATAAATaGGACTACCAGGGTGACCAC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLFFHK*DYQGDH
Trigger: GTGGTCACCCTGGTAGTCCAATTTATGGAAGAACAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAACCACATCATTAAAGTaGAACCCATTTCCACTTGTT +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHETTSLK*NPFPLV
Trigger: AACAAGTGGAAATGGGTTCAACTTTAATGATGTGGT...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAAGCCTTGAATAAATCCTaGAAATACATAAGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEALNKS*KYISSS
Trigger: GGAGCTACTTATGTATTTCAAGGATTTATTCAAGGC...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AGCACTCTCAGAGTGCAGCCAAATTTCTGTAAAACTCTCCATGGTAAACATGAATACCATGAGGTTGATTaGAAGAATTTGAACCTTCTG +
Preference number: 5 (lower is better)
Translates to: STLRVQPNFCKTLHGKHEYHEVD*KNLNLL
Trigger: CAGAAGGTTCAAATTCTTCAAATCAACCTCATGGTA...TTCATGTTTACCATGGAGAGTTTTACAGAAATTTGGCTGCACTCTGAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCCACTGACTTTGCGTaGGTGTCATACATGGGATTT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSTDFA*VSYMGF
Trigger: AAATCCCATGTATGACACCAACGCAAAGTCAGTGGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGCCTCGTTATACCATaGTGCAAACCGTGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCLVIP*CKPCSS
Trigger: ACTTGAACACGGTTTGCACAATGGTATAACGAGGCA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp TCAGTCTTCAGTGTACTTGCCCATTCTTATTCTCTATTACCTCTCTaGAGACTTCATACTAACTCAGTCTTCCTCTCTTTCAATAATTGT +
Preference number: 5 (lower is better)
Translates to: SVFSVLAHSYSLLPL*RLHTNSVFLSFNNC
Trigger: ACAATTATTGAAAGAGAGGAAGACTGAGTTAGTATGAAGTCTGCAGAGAGGTAATAGAGAATAAGAATGGGCAAGTACACTGAAGACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492692.1
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCATATAATACACCTTaGGGTGGAACACCAGGATTT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPYNTP*GGTPGF
Trigger: AAATCCTGGTGTTCCACCCAAAGGTGTATTATATGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCAATGTAGAAGAACCTaGATAGGGAGCACTAAATCC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNQCRRT*IGSTKS
Trigger: GGATTTAGTGCTCCCTATCAAGGTTCTTCTACATTG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAGATAGAAAACTTGTaGCTGTTGTCTTTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKIENL*LLSFPG
Trigger: TCCAGGGAAAGACAACAGCAACAAGTTTTCTATCTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTACAGATGGGTATGTTaGCAGACCATTGGTTATTCT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEYRWVC*QTIGYS
Trigger: AGAATAACCAATGGTCTGCAAACATACCCATCTGTA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTCCTTCATTATTCGTaGCAGATGCACCACATTCAG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNFLHYS*QMHHIQ
Trigger: CTGAATGTGGTGCATCTGCAACGAATAATGAAGGAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGGACTCTCGCAGTTTaGCTTTGTATTCTAGATGAA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKERTLAV*LCILDE
Trigger: TTCATCTAGAATACAAAGCAAAACTGCGAGAGTCCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCGACTGCAAATTCATaGCCAATTCTTCTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPTANS*PILLPN
Trigger: ATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAAAGATGGGGTATTGTaGTTCCTGAATAGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEKDGVL*FLNSFQ
Trigger: TTGGAAGCTATTCAGGAACAACAATACCCCATCTTT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCAAAAGATGGGGTATaGTTGTTCCTGAATAGCTTC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESKDGV*LFLNSF
Trigger: GAAGCTATTCAGGAACAACAATACCCCATCTTTTGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTGAAGAGAATATCCTaGATCACACTGAAAGGATAC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKELKRIS*ITLKGY
Trigger: GTATCCTTTCAGTGTGATCAAGGATATTCTCTTCAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAATGGTGCCATTCATaGCAGTTATATTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKWCHS*QLYSHH
Trigger: GTGGTGGGAATATAACTGCAATGAATGGCACCATTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCACACATTTGAAGATTaGGGTAACTGTCAGGATATC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEHTFED*GNCQDI
Trigger: GATATCCTGACAGTTACCCAAATCTTCAAATGTGTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCATTCTGGTAAAGGTTaGTCCCATTGTCCATTTGGT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNHSGKG*SHCPFG
Trigger: ACCAAATGGACAATGGGACAAACCTTTACCAGAATG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGAGAAGGTGTCCTTTTTaGCAATGGAACTGTACAACA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKERRCPF*QWNCTT
Trigger: TGTTGTACAGTTCCATTGCAAAAAAGGACACCTTCT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp TACATTGATATACAACTGTGTCTCTATATCCATAATTTTCTCCAATaGCTTGACCATTCACAATCAGTTCTGGAATTCCACAATGACCCG +
Preference number: 5 (lower is better)
Translates to: YIDIQLCLYIHNFLQ*LDHSQSVLEFHNDP
Trigger: CGGGTCATTGTGGAATTCCAGAACTGATTGTGAATGGTCAAGTCATTGGAGAAAATTATGGATATAGAGACACAGTTGTATATCAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 90 bp CACAACAAAGTTTGTGAAATAACTCAGGCATTTTTAAGTGTCATCTaGCTGGAAGCAGTTCGATGTGCTCTAATAGGATTTTGTAGACAT +
Preference number: 5 (lower is better)
Translates to: HNKVCEITQAFLSVI*LEAVRCALIGFCRH
Trigger: ATGTCTACAAAATCCTATTAGAGCACATCGAACTGCTTCCAGTCAGATGACACTTAAAAATGCCTGAGTTATTTCACAAACTTTGTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493303.1
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGCAGTTTGCACCATTaGGATATCCATATGGAAAAC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCSLHH*DIHMEN
Trigger: GTTTTCCATATGGATATCCAAATGGTGCAAACTGCA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGATTCCCTTTCCTGCTaGAACCTGAATACTATAAAT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEDSLSC*NLNTIN
Trigger: ATTTATAGTATTCAGGTTCAAGCAGGAAAGGGAATC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGGACTCTCGCAGTTTaGCTTTGTATTCTAGATGAA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRTLAV*LCILDE
Trigger: TTCATCTAGAATACAAAGCAAAACTGCGAGAGTCCT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTGTTCTAGGAACAGCTaGGTAAACAAAGTGAAATCC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNCSRNS*VNKVKS
Trigger: GGATTTCACTTTGTTTACCAAGCTGTTCCTAGAACA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGACAAAATAGTCCCTTaGCGCTTAGTTAAAATTCCA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEDKIVP*RLVKIP
Trigger: TGGAATTTTAACTAAGCGCAAAGGGACTATTTTGTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTCAAAAGATGGGGTATaGTTGTTCCTGAATAGCTTC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNSKDGV*LFLNSF
Trigger: GAAGCTATTCAGGAACAACAATACCCCATCTTTTGA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACTGAGCTAAACAAATaGGGATTGGATAATTCCATC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKETELNK*GLDNSI
Trigger: GATGGAATTATCCAATCCCAATTTGTTTAGCTCAGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCTATGGGTAGATTTATaGTCCATGTGCAATCTAAAC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKELWVDL*SMCNLN
Trigger: GTTTAGATTGCACATGGACAATAAATCTACCCATAG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCTGGACTTTGAATATTaGGTCCATCATACACCTGAA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLDFEY*VHHTPE
Trigger: TTCAGGTGTATGATGGACCAAATATTCAAAGTCCAG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGTCCAAGATAAAGGAATaGATGCTTGGACATGTAACA +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKESKIKE*MLGHVT
Trigger: TGTTACATGTCCAAGCATCAATTCCTTTATCTTGGA...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGATTTTCTCCAATGACTaGACCATTCACAATCAGTTC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEIFSND*TIHNQF
Trigger: GAACTGATTGTGAATGGTCAAGTCATTGGAGAAAAT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGACCACATCATTAAAGTaGAACCCATTTCCACTTGTT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKETTSLK*NPFPLV
Trigger: AACAAGTGGAAATGGGTTCAACTTTAATGATGTGGT...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAGAAGGTGTCCTTTTTaGCAATGGAACTGTACAACA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNRRCPF*QWNCTT
Trigger: TGTTGTACAGTTCCATTGCAAAAAAGGACACCTTCT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAACAAAGCCATCCATaGCCCAATTTTCTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKQSHP*PNFLPS
Trigger: TGAAGGAAGAAAATTGGGCAATGGATGGCTTTGTTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGCCTTGAATAAATCCTaGAAATACATAAGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEALNKS*KYISSS
Trigger: GGAGCTACTTATGTATTTCAAGGATTTATTCAAGGC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGGAAGTCAGTGATCTATaGACTCTTGTAAGTATAGCT +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEEVSDL*TLVSIA
Trigger: AGCTATACTTACAAGAGTCAATAGATCACTGACTTC...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp AAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAAGAGCAGAGTTATCCATATTaGAAAGGGACAACAACAAAG +
Preference number: 5 (lower is better)
Translates to: KSRLFTELSIFERDNNKEQSYPY*KGTTTK
Trigger: CTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTG...CTCTTTGTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACAAGAGGAGTAGCCAGTaGCAGAAGAAACATTGTTTA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNKRSSQ*QKKHCL
Trigger: TAAACAATGTTTCTTCTGCAACTGGCTACTCCTCTT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 90 bp AAACAATTTGTATTCTATTTCGTTCTTCTGCTATTATTACCCATGTaGAGTTTGCACCATTTGGATATCCATATGGAAAACCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: KQFVFYFVLLLLLPM*SLHHLDIHMENQGF
Trigger: AAAGCCCTGGTTTTCCATATGGATATCCAAATGGTGCAAACTGCACATGGGTAATAATAGCAGAAGAACGAAATAGAATACAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000493303.1
ENST00000497026.5
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCATTGGTTATTCTCTaGACAAACAATGGATTTCTC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPLVIL*TNNGFL
Trigger: GAGAAATCCATTGTTTGTCAAGAGAATAACCAATGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTTATTGGAACGACTGTaGTCTGTTGTAAATAGAAGG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNLLERL*SVVNRR
Trigger: CCTTCTATTTACAACAGACAACAGTCGTTCCAATAA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATCTTGAAACCATTATaGGAACGACTGTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNILKPL*ERLLSV
Trigger: AACAGACAACAGTCGTTCCAATAATGGTTTCAAGAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACCCAAATGCATTGTATTaGAGCTGCTTTCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNPNALY*SCFLFS
Trigger: AGAGAATAGAAAGCAGCTCAAATACAATGCATTTGG...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACGACAAAATAGTCCCTTaGCGCTTAGTTAAAATTCCA +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNDKIVP*RLVKIP
Trigger: TGGAATTTTAACTAAGCGCAAAGGGACTATTTTGTC...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACATTTTCTCCAATGACTaGACCATTCACAATCAGTTC +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNIFSND*TIHNQF
Trigger: GAACTGATTGTGAATGGTCAAGTCATTGGAGAAAAT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACACCACATCATTAAAGTaGAACCCATTTCCACTTGTT +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNTTSLK*NPFPLV
Trigger: AACAAGTGGAAATGGGTTCAACTTTAATGATGTGGT...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS-3UTR CAA 90 bp TACAAAAAGTCAAGACTGTTCACAGAGTTATCCATATTTGAAAGGGACAACAACTACCATGAGGTTGATTaGAAGAATTTGAACCTTCTG +
Preference number: 5 (lower is better)
Translates to: YKKSRLFTELSIFERDNNYHEVD*KNLNLL
Trigger: CAGAAGGTTCAAATTCTTCAAATCAACCTCATGGTA...GTTGTTGTCCCTTTCAAATATGGATAACTCTGTGAACAGTCTTGACTTTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp CAGGTTCTCTTCCATCCCCATTTCGAGTCCCATTCATaGGGACCCCTGGGTCACGACACGCAGTGGCAACAG +
Preference number: 6 (lower is better)
Translates to: QVLFHPHFESHS*GPLGHDTQWQQ
Trigger: CTGTTGCCACTGCGTGTCGTGACCCAGGGGTCCCCATGAATGGGACTCGAAATGGGGATGGAAGAGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp AGGCGGCCACATTTAGCGCATCTTCGCTTGCCAGGCTCCCAGGGTTaGGATTCCTTTGCTCGGCTTTCCCCTTTGCGGATCCCTTTCATA +
Preference number: 6 (lower is better)
Translates to: RRPHLAHLRLPGSQG*DSFARLSPLRIPFI
Trigger: TATGAAAGGGATCCGCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTGGCAAGCGAAGATGCGCTAAATGTGGCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000455883.2
ENST00000497026.5
CDS TCA 72 bp CTTGGTCTTCTCCTGGTACTTTGTGTATCTGCTGGATaGGGAGAGAGCCCGTCCTTGGACGTGTTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LGLLLVLCVSAG*GESPSLDVLGS
Trigger: GGACCCCAACACGTCCAAGGACGGGCTCTCTCCTCATCCAGCAGATACACAAAGTACCAGGAGAAGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS CAA 72 bp ATGAAGTCTAGGCGGCCACATTTAGCGCATCTTCGCTaGCCAGGCTCCCAGGGTTTGGATTCCTTTGCTCGG +
Preference number: 6 (lower is better)
Translates to: MKSRRPHLAHLR*PGSQGLDSFAR
Trigger: CCGAGCAAAGGAATCCAAACCCTGGGAGCCTGGCAAGCGAAGATGCGCTAAATGTGGCCGCCTAGACTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000455883.2
ENST00000497026.5
CDS CAA 90 bp TTCATCAGGATGAAGTCTAGGCGGCCACATTTAGCGCATCTTCGCTaGCCAGGCTCCCAGGGTTTGGATTCCTTTGCTCGGCTTTCCCCT +
Preference number: 6 (lower is better)
Translates to: FIRMKSRRPHLAHLR*PGSQGLDSFARLSP
Trigger: AGGGGAAAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTGGCAAGCGAAGATGCGCTAAATGTGGCCGCCTAGACTTCATCCTGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000455883.2
ENST00000497026.5
CDS CCA 72 bp CACATAGGTGGAGGATGGCTCCACTGTCTGTTGGCCTaGCACTGTGCCTTTGTTGGCCCTTGCATAAGATAC +
Preference number: 6 (lower is better)
Translates to: HIGGGWLHCLLA*HCAFVGPCIRY
Trigger: GTATCTTATGCAAGGGCCAACAAAGGCACAGTGCCAGGCCAACAGACAGTGGAGCCATCCTCCACCTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp GGATCCCTTTCATATTATTCGCGAGCTCCTAATTCCTaGTCCTCAGCCCGGCGCAGTGGAGTTGTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: GSLSYYSRAPNS*SSARRSGVVAV
Trigger: AACAGCAACAACTCCACTGCGCCGGGCTGAGGAGCAGGAATTAGGAGCTCGCGAATAATATGAAAGGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000497026.5
CDS GCA 72 bp TCTTCGCTTGCCAGGCTCCCAGGGTTTGGATTCCTTTaGTCGGCTTTCCCCTTTGCGGATCCCTTTCATATT +
Preference number: 6 (lower is better)
Translates to: SSLARLPGFGFL*SAFPFADPFHI
Trigger: AATATGAAAGGGATCCGCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTGGCAAGCGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000455883.2
ENST00000497026.5
CDS GCA 72 bp GGAAATTGCTTGACAGGCAGGGACTGGCGCATCCCATaGATGATACCCATAGGAAGACTTTCTGCACACAGC +
Preference number: 6 (lower is better)
Translates to: GNCLTGRDWRIP*MIPIGRLSAHS
Trigger: GCTGTGTGCAGAAAGTCTTCCTATGGGTATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAAGCAATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp CCTGGGTTACCACACTGCACAGCTTTGCACTCTGGCTaGCTTCCGGTCCAACTGCCATTAGCTAAACATGTT +
Preference number: 6 (lower is better)
Translates to: PGLPHCTALHSG*LPVQLPLAKHV
Trigger: AACATGTTTAGCTAATGGCAGTTGGACCGGAAGGCAGCCAGAGTGCAAAGCTGTGCAGTGTGGTAACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp TACTTCACCTTGACAGGCAGGGACTGGCGCATCCCATaGATGATACCCATAGGAAGACTTTCTGCACACAGC +
Preference number: 6 (lower is better)
Translates to: YFTLTGRDWRIP*MIPIGRLSAHS
Trigger: GCTGTGTGCAGAAAGTCTTCCTATGGGTATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAAGGTGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492692.1
CDS CCA 72 bp ATGTCTTGGTCTTCTCCTGGTACTTTGTGTATCTGCTaGATGAGGAGAGAGCCCGTCCTTGGACGTGTTGGG +
Preference number: 6 (lower is better)
Translates to: MSWSSPGTLCIC*MRREPVLGRVG
Trigger: CCCAACACGTCCAAGGACGGGCTCTCTCCTCATCCAGCAGATACACAAAGTACCAGGAGAAGACCAAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS CCA 72 bp AATTGCCTCCACAGGGTGCTATACAGACTGGTGGGCTaGGCTGCCAGAAGTACCGATTTTCTACCTGAATGC +
Preference number: 6 (lower is better)
Translates to: NCLHRVLYRLVG*AARSTDFLPEC
Trigger: GCATTCAGGTAGAAAATCGGTACTTCTGGCAGCCCAGCCCACCAGTCTGTATAGCACCCTGTGGAGGCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp ATCTTCGCTTGCCAGGCTCCCAGGGTTTGGATTCCTTaGCTCGGCTTTCCCCTTTGCGGATCCCTTTCATAT +
Preference number: 6 (lower is better)
Translates to: IFACQAPRVWIP*LGFPLCGSLSY
Trigger: ATATGAAAGGGATCCGCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCCTGGGAGCCTGGCAAGCGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000455883.2
ENST00000497026.5
CDS GCA 72 bp CTAGCAACAGCAATAGCACCAGTGGTAGTCCTGTTATaGTCCTCTAACTCACCAGTGGAGGTAGTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: LATAIAPVVVLL*SSNSPVEVVWV
Trigger: GACCCACACTACCTCCACTGGTGAGTTAGAGGAGCATAACAGGACTACCACTGGTGCTATTGCTGTTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS GCA 72 bp AGCATGTCTTGGTCTTCTCCTGGTACTTTGTGTATCTaGTGGATGAGGAGAGAGCCCGTCCTTGGACGTGTT +
Preference number: 6 (lower is better)
Translates to: SMSWSSPGTLCI*WMRREPVLGRV
Trigger: AACACGTCCAAGGACGGGCTCTCTCCTCATCCAGCAGATACACAAAGTACCAGGAGAAGACCAAGACATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS GCA 72 bp ACATTCAGCAATACAGGAAGGCAGAGGATAGTCCCATaGCCTTCTCTCCCCTGTCATGCACTTGAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: TFSNTGRQRIVP*PSLPCHALEKA
Trigger: AGCCTTCTCAAGTGCATGACAGGGGAGAGAAGGGCATGGGACTATCCTCTGCCTTCCTGTATTGCTGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp TGGAGGATGGCTCCACTGTCTGTTGGCCTGGCACTGTaGCTTTGTTGGCCCTTGCATAAGATACCCAATATT +
Preference number: 6 (lower is better)
Translates to: WRMAPLSVGLAL*LCWPLHKIPNI
Trigger: AATATTGGGTATCTTATGCAAGGGCCAACAAAGGCACAGTGCCAGGCCAACAGACAGTGGAGCCATCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp AGGAATCCCACAGGAAATTGCTTGACAGGCAGGGACTaGCGCATCCCATGCATGATACCCATAGGAAGACTT +
Preference number: 6 (lower is better)
Translates to: RNPTGNCLTGRD*RIPCMIPIGRL
Trigger: AAGTCTTCCTATGGGTATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAAGCAATTTCCTGTGGGATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp ATCAATTCGGAAGACTTTCCCATTGGCTGTGGTTCCTaGGTTACCACACTGCACAGCTTTGCACTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: INSEDFPIGCGS*VTTLHSFALWL
Trigger: CAGCCAGAGTGCAAAGCTGTGCAGTGTGGTAACCCAGGAACCACAGCCAATGGGAAAGTCTTCCGAATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp TCCTTCCAGCCTTCCATTAGAGATCTGGGGAGGAGTTaGGCAGGTAACAGCTCTACAAGTTGGCATTACTCC +
Preference number: 6 (lower is better)
Translates to: SFQPSIRDLGRS*AGNSSTSWHYS
Trigger: GGAGTAATGCCAACTTGTAGAGCTGTTACCTGCCCAACTCCTCCCCAGATCTCTAATGGAAGGCTGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp GGGCACTTGGGTGCCATTGTAAGATCCAAGCAAGGGTaGCAGAAGATTTGGCCCATCATGAACTTCCAGAAC +
Preference number: 6 (lower is better)
Translates to: GHLGAIVRSKQG*QKIWPIMNFQN
Trigger: GTTCTGGAAGTTCATGATGGGCCAAATCTTCTGTCACCCTTGCTTGGATCTTACAATGGCACCCAAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp TCCAGACCATGTTCCATTGGCTGTGCACTGTCTAACTaGAGGTCCAGAAAGGATGTATCCCTCCATGCAGGA +
Preference number: 6 (lower is better)
Translates to: SRPCSIGCALSN*RSRKDVSLHAG
Trigger: TCCTGCATGGAGGGATACATCCTTTCTGGACCTTCAGTTAGACAGTGCACAGCCAATGGAACATGGTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp CCCAGGGTTTGGATTCCTTTGCTCGGCTTTCCCCTTTaGGGATCCCTTTCATATTATTCGCGAGCTCCTAAT +
Preference number: 6 (lower is better)
Translates to: PRVWIPLLGFPL*GSLSYYSRAPN
Trigger: ATTAGGAGCTCGCGAATAATATGAAAGGGATCCGCAAAGGGGAAAGCCGAGCAAAGGAATCCAAACCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000455883.2
ENST00000497026.5
CDS GCA 72 bp TTGGGGTCCAGACCTGAATTTCTGAGACTCGTAACTTaGACTCGCTGTTCCTCGGAAAGTCTATGGATGGTG +
Preference number: 6 (lower is better)
Translates to: LGSRPEFLRLVT*TRCSSESLWMV
Trigger: CACCATCCATAGACTTTCCGAGGAACAGCGAGTGCAAGTTACGAGTCTCAGAAATTCAGGTCTGGACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS GCA 72 bp AGTAGACCCAAAAGTATACTTCTCGCCAGACAGGACTaGATTAGGAGGAACGCCAGGGTGTCCACAGTCAAT +
Preference number: 6 (lower is better)
Translates to: SRPKSILLARQD*IRRNARVSTVN
Trigger: ATTGACTGTGGACACCCTGGCGTTCCTCCTAATGCAGTCCTGTCTGGCGAGAAGTATACTTTTGGGTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp CTTTTAGTTCTGAAATTGCTTTCCTGTCTAGAGCCATaGCCGGGAGTACCTGGATCGCCACATGTCCCAGTA +
Preference number: 6 (lower is better)
Translates to: LLVLKLLSCLEP*PGVPGSPHVPV
Trigger: TACTGGGACATGTGGCGATCCAGGTACTCCCGGCCATGGCTCTAGACAGGAAAGCAATTTCAGAACTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp TTGTGCCATCAATTCGGAAGACTTTCCCATTGGCTGTaGTTCCTGGGTTACCACACTGCACAGCTTTGCACT +
Preference number: 6 (lower is better)
Translates to: LCHQFGRLSHWL*FLGYHTAQLCT
Trigger: AGTGCAAAGCTGTGCAGTGTGGTAACCCAGGAACCACAGCCAATGGGAAAGTCTTCCGAATTGATGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp GTGATCCACTCCAATGGCCATTCAATTGGCAGGTTCTaGATGACTGGCCTAAAAGGGAACGCTTTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: VIHSNGHSIGRF*MTGLKGNAFLC
Trigger: GCACAGGAAAGCGTTCCCTTTTAGGCCAGTCATCAAGAACCTGCCAATTGAATGGCCATTGGAGTGGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp AGGCAAAGGTTGCCTCGTTATACCATTGTGCAAACCGTGTTCAAGTaGGGATCAAATCGTACCGCCTTCCCTTCCACTGACTTTGCGTTG +
Preference number: 6 (lower is better)
Translates to: RQRLPRYTIVQTVFK*GSNRTAFPSTDFAL
Trigger: CAACGCAAAGTCAGTGGAAGGGAAGGCGGTACGATTTGATCCCAACTTGAACACGGTTTGCACAATGGTATAACGAGGCAACCTTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS TCA 72 bp GATAGGAACAGGAAAATCCCACGAAGCTGTATTAACTaGATTGGCTATGCAGGTGAGCTGAGGGTGGCCATC +
Preference number: 6 (lower is better)
Translates to: DRNRKIPRSCIN*IGYAGELRVAI
Trigger: GATGGCCACCCTCAGCTCACCTGCATAGCCAATTCAGTTAATACAGCTTCGTGGGATTTTCCTGTTCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000462254.1
ENST00000497026.5
ENST00000519485.1
CDS TCA 72 bp TCCATAGAGACCAGCATTGATTGTTGGAGGAAGATCTaGACCAGTCAGGCGTGCCAGTGGTTGGGTAAAACT +
Preference number: 6 (lower is better)
Translates to: SIETSIDCWRKI*TSQACQWLGKT
Trigger: AGTTTTACCCAACCACTGGCACGCCTGACTGGTTCAGATCTTCCTCCAACAATCAATGCTGGTCTCTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp GATGGTGACAGCTGTAACACTGGATACAGTAACATCTaGAGGTGTGCTAGCAACAGCAATAGCACCAGTGGT +
Preference number: 6 (lower is better)
Translates to: DGDSCNTGYSNI*RCASNSNSTSG
Trigger: ACCACTGGTGCTATTGCTGTTGCTAGCACACCTGCAGATGTTACTGTATCCAGTGTTACAGCTGTCACCATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS GCA 72 bp CGTCCGTTTGAAGGTGCAGCCACATTTGGCTACTCATaGTCACTATCAAGTCTGGTACAAAGCTTCCAGTCA +
Preference number: 6 (lower is better)
Translates to: RPFEGAATFGYS*SLSSLVQSFQS
Trigger: TGACTGGAAGCTTTGTACCAGACTTGATAGTGAGCATGAGTAGCCAAATGTGGCTGCACCTTCAAACGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp ATACCCATGAGATGGAAGGTCCATCCCTACGACATTTaGATGAGCAGGAGTTTCTGGCTGTTTACAGCTGTG +
Preference number: 6 (lower is better)
Translates to: IPMRWKVHPYDI*MSRSFWLFTAV
Trigger: CACAGCTGTAAACAGCCAGAAACTCCTGCTCATGCAAATGTCGTAGGGATGGACCTTCCATCTCATGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CCA 72 bp CCCCGACGTCGAATCTTGTGCCATATAATACACCTTTaGGTGGAACACCAGGATTTCCACAAGAGCTACTCT +
Preference number: 6 (lower is better)
Translates to: PRRRILCHIIHL*VEHQDFHKSYS
Trigger: AGAGTAGCTCTTGTGGAAATCCTGGTGTTCCACCCAAAGGTGTATTATATGGCACAAGATTCGACGTCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000497026.5
CDS CCA 72 bp GCACTTGAGAAGGCTACTTCCGTGGAGAGTGTAGCCTaGATTGCATCCATAAATGATGGTGCTACCAGCAAA +
Preference number: 6 (lower is better)
Translates to: ALEKATSVESVA*IASINDGATSK
Trigger: TTTGCTGGTAGCACCATCATTTATGGATGCAATCCAGGCTACACTCTCCACGGAAGTAGCCTTCTCAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp GAATGTATTGTTCTGAGATCCATGCCGAGGCACACCTaGGTTTTCACAAGAGGTTTGGGTAGGCTCTATGCA +
Preference number: 6 (lower is better)
Translates to: ECIVLRSMPRHT*VFTRGLGRLYA
Trigger: TGCATAGAGCCTACCCAAACCTCTTGTGAAAACCCAGGTGTGCCTCGGCATGGATCTCAGAACAATACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CCA 72 bp TGCCTCGTTATACCATTGTGCAAACCGTGTTCAAGTTaGGATCAAATCGTACCGCCTTCCCTTCCACTGACT +
Preference number: 6 (lower is better)
Translates to: CLVIPLCKPCSS*DQIVPPSLPLT
Trigger: AGTCAGTGGAAGGGAAGGCGGTACGATTTGATCCCAACTTGAACACGGTTTGCACAATGGTATAACGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 72 bp TCCCCGACGTCGAATCTTGTGCCATATAATACACCTTaGGGTGGAACACCAGGATTTCCACAAGAGCTACTC +
Preference number: 6 (lower is better)
Translates to: SPTSNLVPYNTP*GGTPGFPQELL
Trigger: GAGTAGCTCTTGTGGAAATCCTGGTGTTCCACCCAAAGGTGTATTATATGGCACAAGATTCGACGTCGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000497026.5
CDS CAA 72 bp GAAAATGTTGTGCCATCAATTCGGAAGACTTTCCCATaGGCTGTGGTTCCTGGGTTACCACACTGCACAGCT +
Preference number: 6 (lower is better)
Translates to: ENVVPSIRKTFP*AVVPGLPHCTA
Trigger: AGCTGTGCAGTGTGGTAACCCAGGAACCACAGCCAATGGGAAAGTCTTCCGAATTGATGGCACAACATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp TTGCCTCGTTATACCATTGTGCAAACCGTGTTCAAGTaGGGATCAAATCGTACCGCCTTCCCTTCCACTGAC +
Preference number: 6 (lower is better)
Translates to: LPRYTIVQTVFK*GSNRTAFPSTD
Trigger: GTCAGTGGAAGGGAAGGCGGTACGATTTGATCCCAACTTGAACACGGTTTGCACAATGGTATAACGAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 90 bp CTGAATGGGATCCTGAGAGGGAAGATAACAGAGAAGATTGCTGAGTaGGCCCATCATACACCTCAACAACATCGTGGAGTGATGTCTGGA +
Preference number: 6 (lower is better)
Translates to: LNGILRGKITEKIAE*AHHTPQQHRGVMSG
Trigger: TCCAGACATCACTCCACGATGTTGTTGAGGTGTATGATGGGCCAACTCAGCAATCTTCTCTGTTATCTTCCCTCTCAGGATCCCATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp AAATCAGTGTATACCCATGAGATGGAAGGTCCATCCCTACGACATTaGCATGAGCAGGAGTTTCTGGCTGTTTACAGCTGTGGGGTATGC +
Preference number: 6 (lower is better)
Translates to: KSVYTHEMEGPSLRH*HEQEFLAVYSCGVC
Trigger: GCATACCCCACAGCTGTAAACAGCCAGAAACTCCTGCTCATGCAAATGTCGTAGGGATGGACCTTCCATCTCATGGGTATACACTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 90 bp GCCTGGATTGCATCCATAAATGATGGTGCTACCAGCAAAGTGGCCTaGGTCACTGATCTTGTATCCAAATTGTGGAATGCCAGGATCTTC +
Preference number: 6 (lower is better)
Translates to: AWIASINDGATSKVA*VTDLVSKLWNARIF
Trigger: GAAGATCCTGGCATTCCACAATTTGGATACAAGATCAGTGACCAAGGCCACTTTGCTGGTAGCACCATCATTTATGGATGCAATCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp AATGAGGTTGTGATCCACTCCAATGGCCATTCAATTGGCAGGTTCTaGATGACTGGCCTAAAAGGGAACGCTTTCCTGTGCAGGAATAGT +
Preference number: 6 (lower is better)
Translates to: NEVVIHSNGHSIGRF*MTGLKGNAFLCRNS
Trigger: ACTATTCCTGCACAGGAAAGCGTTCCCTTTTAGGCCAGTCATCAAGAACCTGCCAATTGAATGGCCATTGGAGTGGATCACAACCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp ACTGAACTAGAAAATGTTGTGCCATCAATTCGGAAGACTTTCCCATaGGCTGTGGTTCCTGGGTTACCACACTGCACAGCTTTGCACTCT +
Preference number: 6 (lower is better)
Translates to: TELENVVPSIRKTFP*AVVPGLPHCTALHS
Trigger: AGAGTGCAAAGCTGTGCAGTGTGGTAACCCAGGAACCACAGCCAATGGGAAAGTCTTCCGAATTGATGGCACAACATTTTCTAGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp GATTTCCAAGCTTCTGAAGAAGGCAAAGGTTGCCTCGTTATACCATaGTGCAAACCGTGTTCAAGTTGGGATCAAATCGTACCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: DFQASEEGKGCLVIP*CKPCSSWDQIVPPS
Trigger: GGAAGGCGGTACGATTTGATCCCAACTTGAACACGGTTTGCACAATGGTATAACGAGGCAACCTTTGCCTTCTTCAGAAGCTTGGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS TCA 72 bp GAAGCTGTATTAACTGAATTGGCTATGCAGGTGAGCTaGGGGTGGCCATCAAGGATGTATCCAGTTACACAG +
Preference number: 6 (lower is better)
Translates to: EAVLTELAMQVS*GWPSRMYPVTQ
Trigger: CTGTGTAACTGGATACATCCTTGATGGCCACCCTCAGCTCACCTGCATAGCCAATTCAGTTAATACAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000462254.1
ENST00000497026.5
CDS TCA 72 bp AGCATGAGAAGGTCAGAGTGTCACCAATCCCAAAGTTaGACCCGATTCGACTACCATATTGAGGAATGCCAG +
Preference number: 6 (lower is better)
Translates to: SMRRSECHQSQS*TRFDYHIEECQ
Trigger: CTGGCATTCCTCAATATGGTAGTCGAATCGGGTTCAACTTTGGGATTGGTGACACTCTGACCTTCTCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp TTCTGGTGGACCGTCCCAGACTCGGAGTATATCATGTaGTGCTTCCGTATCAAAAGCAAGAAACTGCAAGCT +
Preference number: 6 (lower is better)
Translates to: FWWTVPDSEYIM*CFRIKSKKLQA
Trigger: AGCTTGCAGTTTCTTGCTTTTGATACGGAAGCATCACATGATATACTCCGAGTCTGGGACGGTCCACCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp GACCAAGGGATGGTGATGTCAGGCTGTTCTGGCCAATaGTATAGGAGAAGAATCCTTCTAAGGACTTTTGGG +
Preference number: 6 (lower is better)
Translates to: DQGMVMSGCSGQ*YRRRILLRTFG
Trigger: CCCAAAAGTCCTTAGAAGGATTCTTCTCCTATATCATTGGCCAGAACAGCCTGACATCACCATCCCTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493303.1
CDS CCA 72 bp AAAATGTTGTGCCATCAATTCGGAAGACTTTCCCATTaGCTGTGGTTCCTGGGTTACCACACTGCACAGCTT +
Preference number: 6 (lower is better)
Translates to: KMLCHQFGRLSH*LWFLGYHTAQL
Trigger: AAGCTGTGCAGTGTGGTAACCCAGGAACCACAGCCAATGGGAAAGTCTTCCGAATTGATGGCACAACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp CCTGATTCTGGAGCCATTCAATTCCATCGTGTAGCCTaGCTGGCACATGTAAGAAACATTTTGTCCAACCAC +
Preference number: 6 (lower is better)
Translates to: PDSGAIQFHRVA*LAHVRNILSNH
Trigger: GTGGTTGGACAAAATGTTTCTTACATGTGCCAGCCAGGCTACACGATGGAATTGAATGGCTCCAGAATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp TTTGGCATAATATACTTCACCTTGACAGGCAGGGACTaGCGCATCCCATGCATGATACCCATAGGAAGACTT +
Preference number: 6 (lower is better)
Translates to: FGIIYFTLTGRD*RIPCMIPIGRL
Trigger: AAGTCTTCCTATGGGTATCATGCATGGGATGCGCCAGTCCCTGCCTGTCAAGGTGAAGTATATTATGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492692.1
CDS CAA 72 bp CACTGGTCAAACGTAGTGAGAACACAGATTTGGTACTaGTCACTGGAGGTGGCAGATGGAATCCTGTTAACC +
Preference number: 6 (lower is better)
Translates to: HWSNVVRTQIWY*SLEVADGILLT
Trigger: GGTTAACAGGATTCCATCTGCCACCTCCAGTGACAAGTACCAAATCTGTGTTCTCACTACGTTTGACCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000497026.5
CDS CAA 72 bp TATACCCATGAGATGGAAGGTCCATCCCTACGACATTaGCATGAGCAGGAGTTTCTGGCTGTTTACAGCTGT +
Preference number: 6 (lower is better)
Translates to: YTHEMEGPSLRH*HEQEFLAVYSC
Trigger: ACAGCTGTAAACAGCCAGAAACTCCTGCTCATGCAAATGTCGTAGGGATGGACCTTCCATCTCATGGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 72 bp TGGGATCAAATCGTACCGCCTTCCCTTCCACTGACTTaGCGTTGGTGTCATACATGGGATTTTCAAAAGCTG +
Preference number: 6 (lower is better)
Translates to: WDQIVPPSLPLT*RWCHTWDFQKL
Trigger: CAGCTTTTGAAAATCCCATGTATGACACCAACGCAAAGTCAGTGGAAGGGAAGGCGGTACGATTTGATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS TCA 72 bp TCCAAGCAGCAAAAACTTCAGCTATCCGTTGACAGGTaGTGCTCTTTGCGCCCTGTAGGACATAATCTTCAT +
Preference number: 6 (lower is better)
Translates to: SKQQKLQLSVDR*CSLRPVGHNLH
Trigger: ATGAAGATTATGTCCTACAGGGCGCAAAGAGCATCACCTGTCAACGGATAGCTGAAGTTTTTGCTGCTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp CAACTTGCACTTGAATGCCAGCTCCCTCTGGCACTGTaGTCTTCCACACACAATTCAGATTGTTGTCATAAG +
Preference number: 6 (lower is better)
Translates to: QLALECQLPLAL*SSTHNSDCCHK
Trigger: CTTATGACAACAATCTGAATTGTGTGTGGAAGATCACAGTGCCAGAGGGAGCTGGCATTCAAGTGCAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp CAAAGCGGTATTGCCACTGAACTGACCGATCTGAGGTaGATTTTGGTCTGGTCCATCCCATACAGTAATGAA +
Preference number: 6 (lower is better)
Translates to: QSGIATELTDLR*ILVWSIPYSNE
Trigger: TTCATTACTGTATGGGATGGACCAGACCAAAATTCACCTCAGATCGGTCAGTTCAGTGGCAATACCGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS TCA 72 bp AAGTACTGTAGACTGATTCCAAAGCGGTATTGCCACTaGACTGACCGATCTGAGGTGAATTTTGGTCTGGTC +
Preference number: 6 (lower is better)
Translates to: KYCRLIPKRYCH*TDRSEVNFGLV
Trigger: GACCAGACCAAAATTCACCTCAGATCGGTCAGTTCAGTGGCAATACCGCTTTGGAATCAGTCTACAGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS TCA 72 bp GGACATGTAACAACAACACAGCGAGGGGTCTTGTTATaGTTGCTCCATGTTCCATCTGATTGGCATACAGCT +
Preference number: 6 (lower is better)
Translates to: GHVTTTQRGVLL*LLHVPSDWHTA
Trigger: AGCTGTATGCCAATCAGATGGAACATGGAGCAATCATAACAAGACCCCTCGCTGTGTTGTTGTTACATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS TCA 72 bp CCACAGGAAATAACAACACAGCGAGGGGTCTTGTTATaGTTGCTCCATGTTCCATCTGATTGGCATACAGCT +
Preference number: 6 (lower is better)
Translates to: PQEITTQRGVLL*LLHVPSDWHTA
Trigger: AGCTGTATGCCAATCAGATGGAACATGGAGCAATCATAACAAGACCCCTCGCTGTGTTGTTATTTCCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455883.2
CDS GCA 72 bp GCTAAAACTGATGAACGCCAAGGAGATAACATAGTCTaGATTGACGGTGATAGTCCAGTCACAGTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: AKTDERQGDNIV*IDGDSPVTVSA
Trigger: AGCAGAGACTGTGACTGGACTATCACCGTCAATGCAGACTATGTTATCTCCTTGGCGTTCATCAGTTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp TCTGAAGAAGGCAAAGGTTGCCTCGTTATACCATTGTaGAAACCGTGTTCAAGTTGGGATCAAATCGTACCG +
Preference number: 6 (lower is better)
Translates to: SEEGKGCLVIPL*KPCSSWDQIVP
Trigger: CGGTACGATTTGATCCCAACTTGAACACGGTTTGCACAATGGTATAACGAGGCAACCTTTGCCTTCTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS GCA 72 bp CCCTGTCAAAAAGAAGCAACCCATAATGTTCCAGGCTaGACGCTACAGATTGCAGTGCCCTTTTACATGTAT +
Preference number: 6 (lower is better)
Translates to: PCQKEATHNVPG*TLQIAVPFYMY
Trigger: ATACATGTAAAAGGGCACTGCAATCTGTAGCGTGCAGCCTGGAACATTATGGGTTGCTTCTTTTTGACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534172.1
CDS CCA 72 bp CAAAATCACTGGTCAAACGTAGTGAGAACACAGATTTaGTACTTGTCACTGGAGGTGGCAGATGGAATCCTG +
Preference number: 6 (lower is better)
Translates to: QNHWSNVVRTQI*YLSLEVADGIL
Trigger: CAGGATTCCATCTGCCACCTCCAGTGACAAGTACCAAATCTGTGTTCTCACTACGTTTGACCAGTGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000497026.5
CDS CCA 72 bp TTCTTTCTATCTGTTCAGCATGTCTTGGTCTTCTCCTaGTACTTTGTGTATCTGCTGGATGAGGAGAGAGCC +
Preference number: 6 (lower is better)
Translates to: FFLSVQHVLVFS*YFVYLLDEERA
Trigger: GGCTCTCTCCTCATCCAGCAGATACACAAAGTACCAGGAGAAGACCAAGACATGCTGAACAGATAGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS CCA 72 bp TATATTCCCACCACAAAGAGCTTCACACCTTGGAAGTaGATGATTCCAATTACGACTGACTCCGTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: YIPTTKSFTPWK*MIPITTDSVKA
Trigger: TGCCTTCACGGAGTCAGTCGTAATTGGAATCATCCACTTCCAAGGTGTGAAGCTCTTTGTGGTGGGAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp GCAAAATCACTGGTCAAACGTAGTGAGAACACAGATTaGGTACTTGTCACTGGAGGTGGCAGATGGAATCCT +
Preference number: 6 (lower is better)
Translates to: AKSLVKRSENTD*VLVTGGGRWNP
Trigger: AGGATTCCATCTGCCACCTCCAGTGACAAGTACCAAATCTGTGTTCTCACTACGTTTGACCAGTGATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000497026.5
CDS CAA 72 bp GCATCCATAAATGATGGTGCTACCAGCAAAGTGGCCTaGGTCACTGATCTTGTATCCAAATTGTGGAATGCC +
Preference number: 6 (lower is better)
Translates to: ASINDGATSKVA*VTDLVSKLWNA
Trigger: GGCATTCCACAATTTGGATACAAGATCAGTGACCAAGGCCACTTTGCTGGTAGCACCATCATTTATGGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp TTTGGTGAAAGAATAAAGCCTGAAGATCCTGTTAAATaGCCTCCACAGGGTGCTATACAGACTGGTGGGCTG +
Preference number: 6 (lower is better)
Translates to: FGERIKPEDPVK*PPQGAIQTGGL
Trigger: CAGCCCACCAGTCTGTATAGCACCCTGTGGAGGCAATTTAACAGGATCTTCAGGCTTTATTCTTTCACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp TTATATACCCCTGAAAGTAGCAGCTCCATGTTGCTATaGCTCAGTGTTGCGTTAACTCTCCCAGTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: LYTPESSSSMLL*LSVALTLPVEA
Trigger: TGCTTCCACTGGGAGAGTTAACGCAACACTGAGCAATAGCAACATGGAGCTGCTACTTTCAGGGGTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 72 bp TGGCTTTTATATACCCCTGAAAGTAGCAGCTCCATGTaGCTATTGCTCAGTGTTGCGTTAACTCTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: WLLYTPESSSSM*LLLSVALTLPV
Trigger: CACTGGGAGAGTTAACGCAACACTGAGCAATAGCAACATGGAGCTGCTACTTTCAGGGGTATATAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 90 bp GCACTAACTGCAAAATCACTGGTCAAACGTAGTGAGAACACAGATTaGGTACTTGTCACTGGAGGTGGCAGATGGAATCCTGTTAACCTT +
Preference number: 6 (lower is better)
Translates to: ALTAKSLVKRSENTD*VLVTGGGRWNPVNL
Trigger: AAGGTTAACAGGATTCCATCTGCCACCTCCAGTGACAAGTACCAAATCTGTGTTCTCACTACGTTTGACCAGTGATTTTGCAGTTAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000497026.5
CDS CAA 90 bp TCCTGGCTTTTATATACCCCTGAAAGTAGCAGCTCCATGTTGCTATaGCTCAGTGTTGCGTTAACTCTCCCAGTGGAAGCATTGAAACTA +
Preference number: 6 (lower is better)
Translates to: SWLLYTPESSSSMLL*LSVALTLPVEALKL
Trigger: TAGTTTCAATGCTTCCACTGGGAGAGTTAACGCAACACTGAGCAATAGCAACATGGAGCTGCTACTTTCAGGGGTATATAAAAGCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS TCA 72 bp TTCCTAATTGAAAGTTGTCCCCAAACCGCCGTGCATTaGTTGGTATTCCAGGATCAGGGCATTCATTATGTC +
Preference number: 6 (lower is better)
Translates to: FLIESCPQTAVH*LVFQDQGIHYV
Trigger: GACATAATGAATGCCCTGATCCTGGAATACCAATCAATGCACGGCGGTTTGGGGACAACTTTCAATTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp TGTGTCGATTTCCAAGCTTCTGAAGAAGGCAAAGGTTaGCTCGTTATACCATTGTGCAAACCGTGTTCAAGT +
Preference number: 6 (lower is better)
Translates to: CVDFQASEEGKG*LVIPLCKPCSS
Trigger: ACTTGAACACGGTTTGCACAATGGTATAACGAGGCAACCTTTGCCTTCTTCAGAAGCTTGGAAATCGACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CCA 72 bp CTGGAACGGAAAGTTGGGAGATGTAAAGGTACCACTTaGTCCTTGAAGATTAGAGCCACACGTTTTCACTTT +
Preference number: 6 (lower is better)
Translates to: LERKVGRCKGTT*SLKIRATRFHF
Trigger: AAAGTGAAAACGTGTGGCTCTAATCTTCAAGGACCAAGTGGTACCTTTACATCTCCCAACTTTCCGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp CAGGGCACAATACAAGTAGGTAAGGAATCATTCCACTaGGCCAAAGAATTGGGCACTGTTTCACACCTAATT +
Preference number: 6 (lower is better)
Translates to: QGTIQVGKESFH*AKELGTVSHLI
Trigger: AATTAGGTGTGAAACAGTGCCCAATTCTTTGGCCCAGTGGAATGATTCCTTACCTACTTGTATTGTGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp TTTCAAATTCATCATCTTCCGTCAAAATTTCAGCATTaGGCACAGGTGGTGGAGGTTGGCACACCCTTAGTT +
Preference number: 6 (lower is better)
Translates to: FQIHHLPSKFQH*AQVVEVGTPLV
Trigger: AACTAAGGGTGTGCCAACCTCCACCACCTGTGCCCAATGCTGAAATTTTGACGGAAGATGATGAATTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CCA 72 bp AAAGTTGAACCCATTTCCACTTGTTCTTCCATAAATTaGACTACCAGGGTGACCACAGCTAACAGGCACACA +
Preference number: 6 (lower is better)
Translates to: KVEPISTCSSIN*TTRVTTANRHT
Trigger: TGTGTGCCTGTTAGCTGTGGTCACCCTGGTAGTCCAATTTATGGAAGAACAAGTGGAAATGGGTTCAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp CGGAAAGTTGGGAGATGTAAAGGTACCACTTGGTCCTaGAAGATTAGAGCCACACGTTTTCACTTTACACAC +
Preference number: 6 (lower is better)
Translates to: RKVGRCKGTTWS*KIRATRFHFTH
Trigger: GTGTGTAAAGTGAAAACGTGTGGCTCTAATCTTCAAGGACCAAGTGGTACCTTTACATCTCCCAACTTTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp CAAGTAGGTAAGGAATCATTCCACTGGGCCAAAGAATaGGGCACTGTTTCACACCTAATTGCTATGGATCCA +
Preference number: 6 (lower is better)
Translates to: QVGKESFHWAKE*GTVSHLIAMDP
Trigger: TGGATCCATAGCAATTAGGTGTGAAACAGTGCCCAATTCTTTGGCCCAGTGGAATGATTCCTTACCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp AAAACCATTTCGAAACGGGCGTGGATCAGGACAGCTTaGCAACTGATAGGCTTGGTATACAATATGAAACCC +
Preference number: 6 (lower is better)
Translates to: KTISKRAWIRTA*QLIGLVYNMKP
Trigger: GGGTTTCATATTGTATACCAAGCCTATCAGTTGCAAAGCTGTCCTGATCCACGCCCGTTTCGAAATGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp CATCAGGATACCCAGGAGAATAAATGGTGCCATTCATaGCAGTTATATTCCCACCACAAAGAGCTTCACACC +
Preference number: 6 (lower is better)
Translates to: HQDTQENKWCHS*QLYSHHKELHT
Trigger: GGTGTGAAGCTCTTTGTGGTGGGAATATAACTGCAATGAATGGCACCATTTATTCTCCTGGGTATCCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CAA 72 bp GCTTCTGAAGAAGGCAAAGGTTGCCTCGTTATACCATaGTGCAAACCGTGTTCAAGTTGGGATCAAATCGTA +
Preference number: 6 (lower is better)
Translates to: ASEEGKGCLVIP*CKPCSSWDQIV
Trigger: TACGATTTGATCCCAACTTGAACACGGTTTGCACAATGGTATAACGAGGCAACCTTTGCCTTCTTCAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 90 bp GGCACAATACAAGTAGGTAAGGAATCATTCCACTGGGCCAAAGAATaGGGCACTGTTTCACACCTAATTGCTATGGATCCATGGAGAATA +
Preference number: 6 (lower is better)
Translates to: GTIQVGKESFHWAKE*GTVSHLIAMDPWRI
Trigger: TATTCTCCATGGATCCATAGCAATTAGGTGTGAAACAGTGCCCAATTCTTTGGCCCAGTGGAATGATTCCTTACCTACTTGTATTGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp GAGCCATTCACAATTCGCCATCTTCCATGTTCCAAGATAAAGGAATaGATGCTTGGACATGTAACAACAACACAGCGAGGGGTCTTGTTA +
Preference number: 6 (lower is better)
Translates to: EPFTIRHLPCSKIKE*MLGHVTTTQRGVLL
Trigger: TAACAAGACCCCTCGCTGTGTTGTTGTTACATGTCCAAGCATCAATTCCTTTATCTTGGAACATGGAAGATGGCGAATTGTGAATGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS CAA 90 bp ATTCAATTCCATCGTGTAGCCTGGCTGGCACATGTAAGAAACATTTaGTCCAACCACATAATCATCTCCATATCTCAGTCCATTGGCTGG +
Preference number: 6 (lower is better)
Translates to: IQFHRVAWLAHVRNI*SNHIIISISQSIGW
Trigger: CCAGCCAATGGACTGAGATATGGAGATGATTATGTGGTTGGACAAAATGTTTCTTACATGTGCCAGCCAGGCTACACGATGGAATTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp GGAAAATTGCAGCTGAATGAAACCTCTGACTGGTATATAAAGCTTTaGCCTTCTCTTTTTCCTTGGGCAGGTATACCAGGGTCACCACAA +
Preference number: 6 (lower is better)
Translates to: GKLQLNETSDWYIKL*PSLFPWAGIPGSPQ
Trigger: TTGTGGTGACCCTGGTATACCTGCCCAAGGAAAAAGAGAAGGCAAAAGCTTTATATACCAGTCAGAGGTTTCATTCAGCTGCAATTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 90 bp ATTGCCAATTCTTCTTCCGAATCTTGGTTCAGGCACAGAACTGCATaGTGTAGAACTTGTTCTAGGAACAGCAAACTCCTTTGGAACTGC +
Preference number: 6 (lower is better)
Translates to: IANSSSESWFRHRTA*CRTCSRNSKLLWNC
Trigger: GCAGTTCCAAAGGAGTTTGCTGTTCCTAGAACAAGTTCTACACAATGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGAATTGGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339701.7
CDS TCA 72 bp GGAAAGTTGGGAGATGTAAAGGTACCACTTGGTCCTTaGAGATTAGAGCCACACGTTTTCACTTTACACACA +
Preference number: 6 (lower is better)
Translates to: GKLGDVKVPLGP*RLEPHVFTLHT
Trigger: TGTGTGTAAAGTGAAAACGTGTGGCTCTAATCTTCAAGGACCAAGTGGTACCTTTACATCTCCCAACTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp ATAGTCCAGTCACAGTCTCTGCTATGCGGATATGGATaGGGGAAGTTTGGTGAAAGAATAAAGCCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: IVQSQSLLCGYG*GKFGERIKPED
Trigger: ATCTTCAGGCTTTATTCTTTCACCAAACTTCCCTCATCCATATCCGCATAGCAGAGACTGTGACTGGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp AATGTGCACTGTTTTGTGTGTCGATTTCCAAGCTTCTaGAGAAGGCAAAGGTTGCCTCGTTATACCATTGTG +
Preference number: 6 (lower is better)
Translates to: NVHCFVCRFPSF*RRQRLPRYTIV
Trigger: CACAATGGTATAACGAGGCAACCTTTGCCTTCTTCAGAAGCTTGGAAATCGACACACAAAACAGTGCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS GCA 72 bp CTGGGCCAAAGAATTGGGCACTGTTTCACACCTAATTaGTATGGATCCATGGAGAATATATCCTGGATTACA +
Preference number: 6 (lower is better)
Translates to: LGQRIGHCFTPN*YGSMENISWIT
Trigger: TGTAATCCAGGATATATTCTCCATGGATCCATAGCAATTAGGTGTGAAACAGTGCCCAATTCTTTGGCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp ATCAGGATACCCAGGAGAATAAATGGTGCCATTCATTaGAGTTATATTCCCACCACAAAGAGCTTCACACCT +
Preference number: 6 (lower is better)
Translates to: IRIPRRINGAIH*SYIPTTKSFTP
Trigger: AGGTGTGAAGCTCTTTGTGGTGGGAATATAACTGCAATGAATGGCACCATTTATTCTCCTGGGTATCCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CCA 72 bp ATCATTACCAATTACAAAACCATTTCGAAACGGGCGTaGATCAGGACAGCTTTGCAACTGATAGGCTTGGTA +
Preference number: 6 (lower is better)
Translates to: IITNYKTISKRA*IRTALQLIGLV
Trigger: TACCAAGCCTATCAGTTGCAAAGCTGTCCTGATCCACGCCCGTTTCGAAATGGTTTTGTAATTGGTAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp CTGCCCACCTGTCTGACTGATAATATATCCATGAGGTaGGGATTCTGGTGTACTACAGTAGAAAGCTATATA +
Preference number: 6 (lower is better)
Translates to: LPTCLTDNISMR*GFWCTTVESYI
Trigger: TATATAGCTTTCTACTGTAGTACACCAGAATCCCCACCTCATGGATATATTATCAGTCAGACAGGTGGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CCA 72 bp CCTTCCCTTCCACTGACTTTGCGTTGGTGTCATACATaGGATTTTCAAAAGCTGCTTGGCCATTGTTATTTT +
Preference number: 6 (lower is better)
Translates to: PSLPLTLRWCHT*DFQKLLGHCYF
Trigger: AAAATAACAATGGCCAAGCAGCTTTTGAAAATCCCATGTATGACACCAACGCAAAGTCAGTGGAAGGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 72 bp TCTTCTTCCGAATCTTGGTTCAGGCACAGAACTGCATaGTGTAGAACTTGTTCTAGGAACAGCTTGGTAAAC +
Preference number: 6 (lower is better)
Translates to: SSSESWFRHRTA*CRTCSRNSLVN
Trigger: GTTTACCAAGCTGTTCCTAGAACAAGTTCTACACAATGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp ACAATTCGCCATCTTCCATGTTCCAAGATAAAGGAATaGATGCTTGGACATGTAACAACAACACAGCGAGGG +
Preference number: 6 (lower is better)
Translates to: TIRHLPCSKIKE*MLGHVTTTQRG
Trigger: CCCTCGCTGTGTTGTTGTTACATGTCCAAGCATCAATTCCTTTATCTTGGAACATGGAAGATGGCGAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
CDS CAA 72 bp TTGCTCAGTGTTGCGTTAACTCTCCCAGTGGAAGCATaGAAACTAGTAACTGTTAAGGTCATGGGTTGTTTC +
Preference number: 6 (lower is better)
Translates to: LLSVALTLPVEA*KLVTVKVMGCF
Trigger: GAAACAACCCATGACCTTAACAGTTACTAGTTTCAATGCTTCCACTGGGAGAGTTAACGCAACACTGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 72 bp TCTTCTTCCGAATCTTGGTTCAGGCACAGAACTGCATaGTGTAGAACTTGTTCTAGGAACAGCAAACTCCTT +
Preference number: 6 (lower is better)
Translates to: SSSESWFRHRTA*CRTCSRNSKLL
Trigger: AAGGAGTTTGCTGTTCCTAGAACAAGTTCTACACAATGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339701.7
CDS CAA 90 bp CCTGGATTACAATCAAAAAGAACCGATGAACCGACTGCAAATTCATaGCCAATTCTTCTTCCGAATCTTGGTTCAGGCACAGAACTGCAT +
Preference number: 6 (lower is better)
Translates to: PGLQSKRTDEPTANS*PILLPNLGSGTELH
Trigger: ATGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCGGTTCATCGGTTCTTTTTGATTGTAATCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp TTGGATATTCATCAGGATACCCAGGAGAATAAATGGTGCCATTCATaGCAGTTATATTCCCACCACAAAGAGCTTCACACCTTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: LDIHQDTQENKWCHS*QLYSHHKELHTLEV
Trigger: CACTTCCAAGGTGTGAAGCTCTTTGTGGTGGGAATATAACTGCAATGAATGGCACCATTTATTCTCCTGGGTATCCTGATGAATATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CAA 90 bp ATGTTGCTATTGCTCAGTGTTGCGTTAACTCTCCCAGTGGAAGCATaGAAACTAGTAACTGTTAAGGTCATGGGTTGTTTCCTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: MLLLLSVALTLPVEA*KLVTVKVMGCFLPL
Trigger: CAAAGGAAGGAAACAACCCATGACCTTAACAGTTACTAGTTTCAATGCTTCCACTGGGAGAGTTAACGCAACACTGAGCAATAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS TCA 72 bp GTCCCTTCAGTATCGGAATTAAATTCTAGCCAGAGTTaGTTTGAAGTACTACTAAGTGTCAGTCCGCGCATA +
Preference number: 6 (lower is better)
Translates to: VPSVSELNSSQS*FEVLLSVSPRI
Trigger: TATGCGCGGACTGACACTTAGTAGTACTTCAAATCAACTCTGGCTAGAATTTAATTCCGATACTGAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp AGGACCACTAAGCCGGCCAATAACAGTACTAGTTTCTaGGGATCCACTTCGTACTTCCAAATAATCATGTAT +
Preference number: 6 (lower is better)
Translates to: RTTKPANNSTSF*GSTSYFQIIMY
Trigger: ATACATGATTATTTGGAAGTACGAAGTGGATCCTCAGAAACTAGTACTGTTATTGGCCGGCTTAGTGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp GTATCCGGCTCCCTGGATCAGAGATTATCGTCCAGATaGAATTTAAATTATTTCCATACCCTTCTGGGTAAT +
Preference number: 6 (lower is better)
Translates to: VSGSLDQRLSSR*NLNYFHTLLGN
Trigger: ATTACCCAGAAGGGTATGGAAATAATTTAAATTGCATCTGGACGATAATCTCTGATCCAGGGAGCCGGATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp AATCAAAAAGAACCGATGAACCGACTGCAAATTCATTaGCAATTCTTCTTCCGAATCTTGGTTCAGGCACAG +
Preference number: 6 (lower is better)
Translates to: NQKEPMNRLQIH*QFFFRILVQAQ
Trigger: CTGTGCCTGAACCAAGATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCGGTTCATCGGTTCTTTTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp GTACACCAAAACCTATGGGTAGATTTATTGTCCATGTaGAATCTAAACTGCTGGGATAGTTTCCAGGAAACC +
Preference number: 6 (lower is better)
Translates to: VHQNLWVDLLSM*NLNCWDSFQET
Trigger: GGTTTCCTGGAAACTATCCCAGCAGTTTAGATTGCACATGGACAATAAATCTACCCATAGGTTTTGGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp TCTGCTACAATGGTCCAAGTGCAATCAGCATTGTTATaGTACTCATTAGGAAAACTAGGGCTGGATATGATG +
Preference number: 6 (lower is better)
Translates to: SATMVQVQSALL*YSLGKLGLDMM
Trigger: CATCATATCCAGCCCTAGTTTTCCTAATGAGTACCATAACAATGCTGATTGCACTTGGACCATTGTAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000462254.1
ENST00000497026.5
ENST00000519485.1
CDS CCA 72 bp AAGCTCTTTAGTTCTTTCTATCTGTTCAGCATGTCTTaGTCTTCTCCTGGTACTTTGTGTATCTGCTGGATG +
Preference number: 6 (lower is better)
Translates to: KLFSSFYLFSMS*SSPGTLCICWM
Trigger: CATCCAGCAGATACACAAAGTACCAGGAGAAGACCAAGACATGCTGAACAGATAGAAAGAACTAAAGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS CCA 72 bp GACTGCAAATTCATTGCCAATTCTTCTTCCGAATCTTaGTTCAGGCACAGAACTGCATTGTGTAGAACTTGT +
Preference number: 6 (lower is better)
Translates to: DCKFIANSSSES*FRHRTALCRTC
Trigger: ACAAGTTCTACACAATGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGAATTGGCAATGAATTTGCAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp AACCACATAATCATCTCCATATCTCAGTCCATTGGCTaGTATACCTGGGTCTCCACAACTGATTATTGTACA +
Preference number: 6 (lower is better)
Translates to: NHIIISISQSIG*YTWVSTTDYCT
Trigger: TGTACAATAATCAGTTGTGGAGACCCAGGTATACCAGCCAATGGACTGAGATATGGAGATGATTATGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp GCAGGGAAAGATACAGATGGGTATGTTTGCAGACCATaGGTTATTCTCTTGACAAACAATGGATTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: AGKDTDGYVCRP*VILLTNNGFLS
Trigger: GGAGAGAAATCCATTGTTTGTCAAGAGAATAACCAATGGTCTGCAAACATACCCATCTGTATCTTTCCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp TGCCATTGTAAGATCCAAGCAAGGGTGACAGAAGATTaGGCCCATCATGAACTTCCAGAACATCATAATTCA +
Preference number: 6 (lower is better)
Translates to: CHCKIQARVTED*AHHELPEHHNS
Trigger: TGAATTATGATGTTCTGGAAGTTCATGATGGGCCAAATCTTCTGTCACCCTTGCTTGGATCTTACAATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp CAATCAAAAAGAACCGATGAACCGACTGCAAATTCATaGCCAATTCTTCTTCCGAATCTTGGTTCAGGCACA +
Preference number: 6 (lower is better)
Translates to: QSKRTDEPTANS*PILLPNLGSGT
Trigger: TGTGCCTGAACCAAGATTCGGAAGAAGAATTGGCAATGAATTTGCAGTCGGTTCATCGGTTCTTTTTGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp CATTCCCAGGGGGTACTCTTACAAGCCAAAAACAATCTTGAAAGTTaGGATATTCATCAGGATACCCAGGAGAATAAATGGTGCCATTCA +
Preference number: 6 (lower is better)
Translates to: HSQGVLLQAKNNLES*DIHQDTQENKWCHS
Trigger: TGAATGGCACCATTTATTCTCCTGGGTATCCTGATGAATATCCAAACTTTCAAGATTGTTTTTGGCTTGTAAGAGTACCCCCTGGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CAA 90 bp GTCTGGTCCATCCCATACAGTAATGAAATCATATATTGGTTCTGTTaGAAGGACAGTAAAATTGATGTAGATGCCATTCCCAGGGGGTAC +
Preference number: 6 (lower is better)
Translates to: VWSIPYSNEIIYWFC*KDSKIDVDAIPRGY
Trigger: GTACCCCCTGGGAATGGCATCTACATCAATTTTACTGTCCTTCAAACAGAACCAATATATGATTTCATTACTGTATGGGATGGACCAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CAA 90 bp ATTGCCAATTCTTCTTCCGAATCTTGGTTCAGGCACAGAACTGCATaGTGTAGAACTTGTTCTAGGAACAGCTTGGTAAACAAAGTGAAA +
Preference number: 6 (lower is better)
Translates to: IANSSSESWFRHRTA*CRTCSRNSLVNKVK
Trigger: TTTCACTTTGTTTACCAAGCTGTTCCTAGAACAAGTTCTACACAATGCAGTTCTGTGCCTGAACCAAGATTCGGAAGAAGAATTGGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS CAA 90 bp TCCAACCATATATCTGTCTCCAATTTTAATTCCACTGCTAGGAGTTaGTGGTTCAGGACAGGAATCCAAACCAATTGCTGTGTATTCAAG +
Preference number: 6 (lower is better)
Translates to: SNHISVSNFNSTARS*WFRTGIQTNCCVFK
Trigger: CTTGAATACACAGCAATTGGTTTGGATTCCTGTCCTGAACCACAAACTCCTAGCAGTGGAATTAAAATTGGAGACAGATATATGGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp AGAAAGGATGTATCCCTCCATGCAGGAATAAATGACTaGACTAGAAAATGTTGTGCCATCAATTCGGAAGAC +
Preference number: 6 (lower is better)
Translates to: RKDVSLHAGIND*TRKCCAINSED
Trigger: GTCTTCCGAATTGATGGCACAACATTTTCTAGTTCAGTCATTTATTCCTGCATGGAGGGATACATCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp AGTGTACTTGCCCATTCTTATTCTCTATTACCTCTCTaGAGACTTCATACTAACTCAGTCTTCCTCTCTTTC +
Preference number: 6 (lower is better)
Translates to: SVLAHSYSLLPL*RLHTNSVFLSF
Trigger: GAAAGAGAGGAAGACTGAGTTAGTATGAAGTCTGCAGAGAGGTAATAGAGAATAAGAATGGGCAAGTACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492692.1
CDS CCA 72 bp TTAATAAGATATATGCGTAACATTAGGCGAGCTTCCTaGCTTTTATATACCCCTGAAAGTAGCAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: LIRYMRNIRRAS*LLYTPESSSSM
Trigger: CATGGAGCTGCTACTTTCAGGGGTATATAAAAGCCAGGAAGCTCGCCTAATGTTACGCATATATCTTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 72 bp TATTTCGTTCTTCTGCTATTATTACCCATGTGCAGTTaGCACCATTTGGATATCCATATGGAAAACCAGGGC +
Preference number: 6 (lower is better)
Translates to: YFVLLLLLPMCS*HHLDIHMENQG
Trigger: GCCCTGGTTTTCCATATGGATATCCAAATGGTGCAAACTGCACATGGGTAATAATAGCAGAAGAACGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000493303.1
ENST00000497026.5
CDS CAA 72 bp ACATGTAATGTGAGAGTGACCCTGAAGAGAATATCCTaGATCACACTGAAAGGATACTACATCTCCAACCAT +
Preference number: 6 (lower is better)
Translates to: TCNVRVTLKRIS*ITLKGYYISNH
Trigger: ATGGTTGGAGATGTAGTATCCTTTCAGTGTGATCAAGGATATTCTCTTCAGGGTCACTCTCACATTACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp ACTGGAGATGTACACCAAAACCTATGGGTAGATTTATaGTCCATGTGCAATCTAAACTGCTGGGATAGTTTC +
Preference number: 6 (lower is better)
Translates to: TGDVHQNLWVDL*SMCNLNCWDSF
Trigger: GAAACTATCCCAGCAGTTTAGATTGCACATGGACAATAAATCTACCCATAGGTTTTGGTGTACATCTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp TTGTCGTTTTGTATTGACCAAAATCAAACCACATATTaGGACTTGTTGGCTGCCAAGGTGGAGTATAGCCTT +
Preference number: 6 (lower is better)
Translates to: LSFCIDQNQTTY*DLLAAKVEYSL
Trigger: AAGGCTATACTCCACCTTGGCAGCCAACAAGTCCAAATATGTGGTTTGATTTTGGTCAATACAAAACGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534172.1
CDS CAA 90 bp GTGCAAATTTTGGATGCTAAGAGTGAAACTCAGTCTTCAGTGTACTaGCCCATTCTTATTCTCTATTACCTCTCTGCAGACTTCATACTA +
Preference number: 6 (lower is better)
Translates to: VQILDAKSETQSSVY*PILILYYLSADFIL
Trigger: TAGTATGAAGTCTGCAGAGAGGTAATAGAGAATAAGAATGGGCAAGTACACTGAAGACTGAGTTTCACTCTTAGCATCCAAAATTTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492692.1
CDS TCA 72 bp GTGTCAAACTGGATGGTTACTATATTGAGGGTGCTATaGATTCCTTCAGGAATAAGAGATCCACTAATTTCC +
Preference number: 6 (lower is better)
Translates to: VSNWMVTILRVL*IPSGIRDPLIS
Trigger: GGAAATTAGTGGATCTCTTATTCCTGAAGGAATTCATAGCACCCTCAATATAGTAACCATCCAGTTTGACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp GTTATTGGTCCAACTGAAGTAAATCGAATTGTGATCTaGTTACCTGAACTCAGTGGAAGTGATTCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: VIGPTEVNRIVI*LPELSGSDSPE
Trigger: TTCAGGAGAATCACTTCCACTGAGTTCAGGTAATCAGATCACAATTCGATTTACTTCAGTTGGACCAATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
CDS CCA 72 bp TGTCTGACTGATAATATATCCATGAGGTGGGGATTCTaGTGTACTACAGTAGAAAGCTATATATCTTATCCG +
Preference number: 6 (lower is better)
Translates to: CLTDNISMRWGF*CTTVESYISYP
Trigger: CGGATAAGATATATAGCTTTCTACTGTAGTACACCAGAATCCCCACCTCATGGATATATTATCAGTCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS CAA 72 bp CTGTCTGTAACAAAATGCAGTCTGAGCCAGTTTTTGTaGCTGATAATTGGTGGTGGTATATTCATTCCAGAT +
Preference number: 6 (lower is better)
Translates to: LSVTKCSLSQFL*LIIGGGIFIPD
Trigger: ATCTGGAATGAATATACCACCACCAATTATCAGCAACAAAAACTGGCTCAGACTGCATTTTGTTACAGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000497026.5
CDS CAA 72 bp TTGCTGTCTGTAACAAAATGCAGTCTGAGCCAGTTTTaGTTGCTGATAATTGGTGGTGGTATATTCATTCCA +
Preference number: 6 (lower is better)
Translates to: LLSVTKCSLSQF*LLIIGGGIFIP
Trigger: TGGAATGAATATACCACCACCAATTATCAGCAACAAAAACTGGCTCAGACTGCATTTTGTTACAGACAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000497026.5
CDS TCA 72 bp GAGAATATATCCTGGATTACAATCAAAAAGAACCGATaGACCGACTGCAAATTCATTGCCAATTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: ENISWITIKKNR*TDCKFIANSSS
Trigger: GGAAGAAGAATTGGCAATGAATTTGCAGTCGGTTCATCGGTTCTTTTTGATTGTAATCCAGGATATATTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS TCA 72 bp CTTTGTTGGCCCTTGCATAAGATACCCAATATTGCATaGGAATGTTACCACATCATTAAAGTTGAACCCATT +
Preference number: 6 (lower is better)
Translates to: LCWPLHKIPNIA*ECYHIIKVEPI
Trigger: AATGGGTTCAACTTTAATGATGTGGTAACATTCTCATGCAATATTGGGTATCTTATGCAAGGGCCAACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS CAA 72 bp ATTCTGGTGCTTGATCCCACTAATATGAAAGGAAAATaGCAGCTGAATGAAACCTCTGACTGGTATATAAAG +
Preference number: 6 (lower is better)
Translates to: ILVLDPTNMKGK*QLNETSDWYIK
Trigger: CTTTATATACCAGTCAGAGGTTTCATTCAGCTGCAATTTTCCTTTCATATTAGTGGGATCAAGCACCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 72 bp TGGCTACAGAACTACTATTTGTACCATGAGGTTGATTaGAAGAATTTGAACCTTCTGACATATTCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: WLQNYYLYHEVD*KNLNLLTYSVP
Trigger: TGGGACTGAATATGTCAGAAGGTTCAAATTCTTCAAATCAACCTCATGGTACAAATAGTAGTTCTGTAGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000534172.1
CDS CAA 90 bp TTATTTTACATATCAAAAGAGGCAAAGGTATTCCATAAGTATACCTaGATAGGGAGCACTAAATCCACGGTATCGATGATTGCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: LFYISKEAKVFHKYT*IGSTKSTVSMIAVC
Trigger: ACAGACAGCAATCATCGATACCGTGGATTTAGTGCTCCCTATCAAGGTATACTTATGGAATACCTTTGCCTCTTTTGATATGTAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497026.5
CDS TCA 72 bp TTCTACAAACATGGTGATATTATAACCCTTTTCCACTaGAATGCTCCATGCACACATTTGAAGATTTGGGTA +
Preference number: 6 (lower is better)
Translates to: FYKHGDIITLFH*NAPCTHLKIWV
Trigger: TACCCAAATCTTCAAATGTGTGCATGGAGCATTTCAGTGGAAAAGGGTTATAATATCACCATGTTTGTAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
ENST00000492692.1
CDS TCA 72 bp ATACAACTGTGTCTCTATATCCATAATTTTCTCCAATaGCTTGACCATTCACAATCAGTTCTGGAATTCCAC +
Preference number: 6 (lower is better)
Translates to: IQLCLYIHNFLQ*LDHSQSVLEFH
Trigger: GTGGAATTCCAGAACTGATTGTGAATGGTCAAGTCATTGGAGAAAATTATGGATATAGAGACACAGTTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297405.10
ENST00000339701.7
ENST00000343508.7
ENST00000455883.2
CDS GCA 72 bp GTATTCTATTTCGTTCTTCTGCTATTATTACCCATGTaGAGTTTGCACCATTTGGATATCCATATGGAAAAC +
Preference number: 6 (lower is better)
Translates to: VFYFVLLLLLPM*SLHHLDIHMEN
Trigger: GTTTTCCATATGGATATCCAAATGGTGCAAACTGCACATGGGTAATAATAGCAGAAGAACGAAATAGAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2
ENST00000493303.1
ENST00000497026.5
CDS GCA 72 bp AAAATCTATGGCCTTTTTCACTCTATGAGTAACAACTaGAAGCTCTTTAGTTCTTTCTATCTGTTCAGCATG +
Preference number: 6 (lower is better)
Translates to: KIYGLFHSMSNN*KLFSSFYLFSM
Trigger: CATGCTGAACAGATAGAAAGAACTAAAGAGCTTGCAGTTGTTACTCATAGAGTGAAAAAGGCCATAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297405.10
ENST00000343508.7
CDS CAA 72 bp ATACCTCCCTCATTTAAGATAGAAAACTTGTTGCTGTaGTCTTTCCCTGGAAACAATTTAAATCCTCTAGAT +
Preference number: 6 (lower is better)
Translates to: IPPSFKIENLLL*SFPGNNLNPLD
Trigger: ATCTAGAGGATTTAAATTGTTTCCAGGGAAAGACAACAGCAACAAGTTTTCTATCTTAAATGAGGGAGGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297405.10
ENST00000343508.7
ENST00000455883.2