RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSMD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000121904

Ensembl transcript IDs: ENST00000241312.8, ENST00000338325.1, ENST00000373377.1, ENST00000373380.5, ENST00000373381.8, ENST00000373381.9, ENST00000373388.6, ENST00000465819.1, ENST00000471438.2, ENST00000489419.1, ENST00000619121.4

Found 2722 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGGCTGCTGGGAGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTaGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGC +
Preference number: 1 (lower is better)
Translates to: SGCWEPRSQHQPWEA*GVESLPRSCLRGDS
Trigger: GCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCTCCCAGCAGCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR TCA 90 bp TTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGGTaGTGCCCAGCAGAGTGCTGGGTGCCCCACCAGCAGGTGCTCCTC +
Preference number: 1 (lower is better)
Translates to: FQASGGGEKCQGCGG*CPAECWVPHQQVLL
Trigger: GAGGAGCACCTGCTGGTGGGGCACCCAGCACTCTGCTGGGCATCACCCTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 90 bp TTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGTCAGCGGCTaGTGGGAGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGA +
Preference number: 1 (lower is better)
Translates to: LIQDLPGLLLAMVSG*WEPRSQHQPWEAWG
Trigger: TCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 90 bp GCGGAGGGTGATGCCCAGCAGAGTGCTGGGTGCCCCACCAGCAGGTaGTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGA +
Preference number: 1 (lower is better)
Translates to: AEGDAQQSAGCPTSR*SSSISWNFTRRRRG
Trigger: TCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAGCACTCTGCTGGGCATCACCCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 90 bp CTGAGTCCCAGCAGTAGCAGACACAGGCAAGGAGACGAACGAAGATaGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCCCT +
Preference number: 1 (lower is better)
Translates to: LSPSSSRHRQGDERR*ALGTVLRGAYFLPP
Trigger: AGGGGGCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTCCTTGCCTGTGTCTGCTACTGCTGGGACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 90 bp TTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATaGCGGCAGGGCGAGGGCCTGAGTCCCAGCAGTAGCAGACACAGG +
Preference number: 1 (lower is better)
Translates to: FSGHGRSPLQGNWHR*RQGEGLSPSSSRHR
Trigger: CCTGTGTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR TCA 90 bp GTCCTCTCCAGGGTAACTGGCATAGATGGCGGCAGGGCGAGGGCCTaGGTCCCAGCAGTAGCAGACACAGGCAAGGAGACGAACGAAGAT +
Preference number: 1 (lower is better)
Translates to: VLSRVTGIDGGRARA*VPAVADTGKETNED
Trigger: ATCTTCGTTCGTCTCCTTGCCTGTGTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 90 bp CTGCCGCTGTGCAGATGGGCCGTTCATCAGCAGACAGCTGGTTTCTaGACGCTGACCGGGTTTCTGCACTCTGACCGCATGATGGGATGT +
Preference number: 1 (lower is better)
Translates to: LPLCRWAVHQQTAGF*TLTGFLHSDRMMGC
Trigger: ACATCCCATCATGCGGTCAGAGTGCAGAAACCCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGATGAACGGCCCATCTGCACAGCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 90 bp AGAAATGTCAGGGGTGCGGAGGGTGATGCCCAGCAGAGTGCTGGGTaGCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACA +
Preference number: 1 (lower is better)
Translates to: RNVRGAEGDAQQSAG*PTSRCSSSISWNFT
Trigger: TGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAGCACTCTGCTGGGCATCACCCTCCGCACCCCTGACATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 90 bp GACCCCACCAGCAACGTTCCGAGGAGTAGAATAAACCAACCAGAGTaGAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCC +
Preference number: 1 (lower is better)
Translates to: DPTSNVPRSRINQPE*SCCYNLQGSQGRGP
Trigger: GGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGCACTCTGGTTGGTTTATTCTACTCCTCGGAACGTTGCTGGTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR CCA 90 bp ACGCGGAGACAGCAGAACCCAGATAGGACACACAGGTGTCTTGCCTaGCTTTCCAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGG +
Preference number: 1 (lower is better)
Translates to: TRRQQNPDRTHRCLA*LSRPGHSATVEIHR
Trigger: CCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTCCTATCTGGGTTCTGCTGTCTCCGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR TCA 90 bp TCAGCAGACAGCTGGTTTCTGCACGCTGACCGGGTTTCTGCACTCTaGCCGCATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCA +
Preference number: 1 (lower is better)
Translates to: SADSWFLHADRVSAL*PHDGMCPTVTVTES
Trigger: TGACTCGGTGACTGTAACAGTAGGACACATCCCATCATGCGGTCAGAGTGCAGAAACCCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 90 bp TGGATTTCATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATaGGAACTGAGCAGATGGAGAGGGCGGAGTCTCATTCCCACATTG +
Preference number: 1 (lower is better)
Translates to: WISLVERQVCPMRGA*ELSRWRGRSLIPTL
Trigger: CAATGTGGGAATGAGACTCCGCCCTCTCCATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAATGAAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR GCA 90 bp GGTCCTATTTCAACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTaGAGTCAGCTCAGGTGTCCACCTCTGGTCCAAGCTTCTGTGGCT +
Preference number: 1 (lower is better)
Translates to: GPISTSQERTSDCPC*SQLRCPPLVQASVA
Trigger: AGCCACAGAAGCTTGGACCAGAGGTGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGTTGAAATAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR GCA 90 bp TTGGGTCCTATTTCAACTTCCCAAGAGAGAACATCTGATTGCCCCTaGTGCAGTCAGCTCAGGTGTCCACCTCTGGTCCAAGCTTCTGTG +
Preference number: 1 (lower is better)
Translates to: LGPISTSQERTSDCP*CSQLRCPPLVQASV
Trigger: CACAGAAGCTTGGACCAGAGGTGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR TCA 90 bp GTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATCTaGTTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACCTCTGGTCCA +
Preference number: 1 (lower is better)
Translates to: VESLGSYFNFPRENI*LPLLQSAQVSTSGP
Trigger: TGGACCAGAGGTGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR CCA 90 bp TTTATATCCTGGCAAGGCCAGTTTCCCACAGTTACTGGAGGCTGGTaGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCTGCT +
Preference number: 1 (lower is better)
Translates to: FISWQGQFPTVTGGW*CLQPYKLDSPFHPA
Trigger: AGCAGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGCCTCCAGTAACTGTGGGAAACTGGCCTTGCCAGGATATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR CCA 90 bp CTGTTTATATCCTGGCAAGGCCAGTTTCCCACAGTTACTGGAGGCTaGTGGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCT +
Preference number: 1 (lower is better)
Translates to: LFISWQGQFPTVTGG*WCLQPYKLDSPFHP
Trigger: AGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGCCTCCAGTAACTGTGGGAAACTGGCCTTGCCAGGATATAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR CCA 90 bp AGGGTTTCTGGCAGCTGGTGTAGTGGACTTTGGGGCAGACTGATCTaGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCT +
Preference number: 1 (lower is better)
Translates to: RVSGSWCSGLWGRLI*VCILTPHFLTLSLP
Trigger: AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCAAAGTCCACTACACCAGCTGCCAGAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR TCA 90 bp CCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACTaGGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAG +
Preference number: 1 (lower is better)
Translates to: PTSASVFPVLLSSFH*EGFSVVILWVSFIK
Trigger: CTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CCA 90 bp CAGAGCAGATACTGTAGCAGATACTGCAGCAGATACTGCGGAGGCTaGGTTCTGTTTCCAGTTCTATCCACATGGTTTTGGGCAAGTACT +
Preference number: 1 (lower is better)
Translates to: QSRYCSRYCSRYCGG*VLFPVLSTWFWAST
Trigger: AGTACTTGCCCAAAACCATGTGGATAGAACTGGAAACAGAACCCAGCCTCCGCAGTATCTGCTGCAGTATCTGCTACAGTATCTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CCA 90 bp TCTCATTCCCACATTGCACTCACCCTGGACGATAGCTCCTGGGAATaGCAGTCACAGCTGCTTAGGTTCTTTACATCCTTGTTTCTCTCT +
Preference number: 1 (lower is better)
Translates to: SHSHIALTLDDSSWE*QSQLLRFFTSLFLS
Trigger: AGAGAGAAACAAGGATGTAAAGAACCTAAGCAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTGGGAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CCA 90 bp CTGGTTCTGGTACAGGTGAAGGCTCAGGAACAGGAACAAGAGACCTaGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTA +
Preference number: 1 (lower is better)
Translates to: LVLVQVKAQEQEQET*PTTKVTLHQACQYL
Trigger: TAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAGGTCTCTTGTTCCTGTTCCTGAGCCTTCACCTGTACCAGAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR TCA 90 bp CTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTaGCCTAATTGCCTCCCAAGGCCCCACCTCCTAATACCATCACCT +
Preference number: 1 (lower is better)
Translates to: LFYKGTNPIHEGSVV*PNCLPRPHLLIPSP
Trigger: AGGTGATGGTATTAGGAGGTGGGGCCTTGGGAGGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CCA 90 bp AGCCTCCATTGTGTCTGCTGGAAATGGACGCCTCTCACTTTCCTCTaGCCACTCTTAACATCAGTCAGATCTTCTAATTGTTCCAATCTA +
Preference number: 1 (lower is better)
Translates to: SLHCVCWKWTPLTFL*PLLTSVRSSNCSNL
Trigger: TAGATTGGAACAATTAGAAGATCTGACTGATGTTAAGAGTGGCCAGAGGAAAGTGAGAGGCGTCCATTTCCAGCAGACACAATGGAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR TCA 90 bp TGGGTTCTGTTTCCAGTTCTATCCACATGGTTTTGGGCAAGTACTTaGGCCTTCCTTTGCCCTATTTCTTCATTTGTAAAGTGGGGGTTA +
Preference number: 1 (lower is better)
Translates to: WVLFPVLSTWFWAST*AFLCPISSFVKWGL
Trigger: TAACCCCCACTTTACAAATGAAGAAATAGGGCAAAGGAAGGCTCAAGTACTTGCCCAAAACCATGTGGATAGAACTGGAAACAGAACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR TCA 90 bp GAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATaGCAGAGCCTTAAAGCCTGGATTTCATTAGTGGAGCGACAGGTG +
Preference number: 1 (lower is better)
Translates to: EVHTLITLWESHKSK*QSLKAWISLVERQV
Trigger: CACCTGTCGCTCCACTAATGAAATCCAGGCTTTAAGGCTCTGTCATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR GCA 90 bp GTTTCTTTCACTACCTCTTTCACAGTCTTAGTGTGTTTCTGCAAGTaGACGCATGATGTAATAACACTGTATAGTCACACCAGAGCAGAT +
Preference number: 1 (lower is better)
Translates to: VSFTTSFTVLVCFCK*THDVITLYSHTRAD
Trigger: ATCTGCTCTGGTGTGACTATACAGTGTTATTACATCATGCGTGCACTTGCAGAAACACACTAAGACTGTGAAAGAGGTAGTGAAAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR GCA 90 bp CTTCCTGTTTCTTTCACTACCTCTTTCACAGTCTTAGTGTGTTTCTaGAAGTGCACGCATGATGTAATAACACTGTATAGTCACACCAGA +
Preference number: 1 (lower is better)
Translates to: LPVSFTTSFTVLVCF*KCTHDVITLYSHTR
Trigger: TCTGGTGTGACTATACAGTGTTATTACATCATGCGTGCACTTGCAGAAACACACTAAGACTGTGAAAGAGGTAGTGAAAGAAACAGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR TCA 90 bp ATTCCTATTTTGTGCATAATAACATTGAGGCTCAGAAGGGTGAAATaGCAGACAAAGTTACATAGCTTGCATGTGTCAGAGCCAAGGTTT +
Preference number: 1 (lower is better)
Translates to: IPILCIITLRLRRVK*QTKLHSLHVSEPRF
Trigger: AAACCTTGGCTCTGACACATGCAAGCTATGTAACTTTGTCTGTCATTTCACCCTTCTGAGCCTCAATGTTATTATGCACAAAATAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGGGCACTGGGCACTGTaGTCAGGGGAGCCTACTTCC +
Preference number: 2 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSGHWAL*SGEPTS
Trigger: GGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 90 bp GCTGGGAGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTaGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCC +
Preference number: 2 (lower is better)
Translates to: AGSQGASTNRGRPGE*NPCPEAAYAETAEP
Trigger: GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCTCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGCAGGGCGAGGGCCTaGGTCCCAGCAGTAGCAGAC +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGRARA*VPAVAD
Trigger: GTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCTGGGGAACGGCTGCTaGAGGCGGGGCTCTCGGTGG +
Preference number: 2 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRLGNGC*RRGSRW
Trigger: CCACCGAGAGCCCCGCCTCCAGCAGCCGTTCCCCAG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACTACTTCCTGCCCCCTaGGGAACGGCTGCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: QGASTNRGRPGELNPCPELLPAP*GTAAGG
Trigger: GCCTCCAGCAGCCGTTCCCCAGGGGGCAGGAAGTAG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGTCTTTTGCTGGCTATaGTCAGCGGCTGCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSVFCWL*SAAAGS
Trigger: GCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGAC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACGGGTTTCTGCACTCTaGCCGCATGATGGGATGTGT +
Preference number: 2 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSRVSAL*PHDGMC
Trigger: ACACATCCCATCATGCGGTCAGAGTGCAGAAACCCG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTGGGGTAATCCTTGCTaGCGCTGTGCAGATGGGCCG +
Preference number: 2 (lower is better)
Translates to: SQGASTNRGRPGELNPCPWGNPC*RCADGP
Trigger: CGGCCCATCTGCACAGCGGCAGCAAGGATTACCCCA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATCCTGGCCAGACTCCTaGCCTATCCTCCCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: QGASTNRGRPGELNPCPESWPDS*PILPGS
Trigger: AGAGCCGGGGAGGATAGGGCAGGAGTCTGGCCAGGA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACTGGGGAACGGCTGCTaGAGGCGGGGCTCTCGGTGG +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLGNGC*RRGSRW
Trigger: CCACCGAGAGCCCCGCCTCCAGCAGCCGTTCCCCAG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGGTAACTGGCATAGATaGCGGCAGGGCGAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: QGASTNRGRPGELNPCPEGNWHR*RQGEGL
Trigger: CAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGCAGGGCGAGGGCCTaGGTCCCAGCAGTAGCAGAC +
Preference number: 2 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGRARA*VPAVAD
Trigger: GTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCCTTGGGGTAATCCTTaGTGCCGCTGTGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: SQGASTNRGRPGELNPCPPWGNP*CRCADG
Trigger: CCCATCTGCACAGCGGCAGCAAGGATTACCCCAAGG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTCTCAAGGACCCTGCTaGTGCCCCCAGACTTGGCAT +
Preference number: 2 (lower is better)
Translates to: SQGASTNRGRPGELNPCPSQGPC*CPQTWH
Trigger: ATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTTCTCTCAAGGACCCTaGTGCTGCCCCCAGACTTGG +
Preference number: 2 (lower is better)
Translates to: SQGASTNRGRPGELNPCPFSQGP*CCPQTW
Trigger: CCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGAGAA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCACAGGTGTCTTGCCTaGCTTTCCAGACCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHRCLA*LSRPGH
Trigger: GTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTGTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGTGGGGAACAGGGCATaGAGCATCCTTCATGCGCAC +
Preference number: 2 (lower is better)
Translates to: QGASTNRGRPGELNPCPEVGNRA*SILHAH
Trigger: GTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCAC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCGGGTTTCTGCACTCTaGCCGCATGATGGGATGTGT +
Preference number: 2 (lower is better)
Translates to: SQGASTNRGRPGELNPCPRVSAL*PHDGMC
Trigger: ACACATCCCATCATGCGGTCAGAGTGCAGAAACCCG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACGAGGGGCATGGGAACTaGGCAGATGGAGAGGGCGGA +
Preference number: 2 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHEGHGN*ADGEGG
Trigger: TCCGCCCTCTCCATCTGCTCAGTTCCCATGCCCCTC...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGGGGTAATCCTTGCTaGCGCTGTGCAGATGGGCCG +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEWGNPC*RCADGP
Trigger: CGGCCCATCTGCACAGCGGCAGCAAGGATTACCCCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTTCTCTCAAGGACCCTaGTGCTGCCCCCAGACTTGG +
Preference number: 2 (lower is better)
Translates to: PGELNPCPEAAYAETAEPFSQGP*CCPQTW
Trigger: CCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGAGAA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTCCTTGCCCCGAAGCTaGCTACGCGGAGACAGCAGA +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAESLPRS*LRGDSR
Trigger: TCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTCCTTGCCCCGAAGCTaGCTACGCGGAGACAGCAGA +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSLPRS*LRGDSR
Trigger: TCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCCAGGGGTAGGCTCCTaGCTCTGTCAGCCTCCATTG +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGPGVGS*LCQPPL
Trigger: CAATGGAGGCTGACAGAGGCAGGAGCCTACCCCTGG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCCAGGGGTAGGCTCCTaGCTCTGTCAGCCTCCATTG +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEPGVGS*LCQPPL
Trigger: CAATGGAGGCTGACAGAGGCAGGAGCCTACCCCTGG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGCCCCACCAGCAGGTaGTCCTCGAGCATCTCATGG +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAECPTSR*SSSISW
Trigger: CCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTACTTCCTGCCCCCTaGGGAACGGCTGCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLLPAP*GTAAGG
Trigger: GCCTCCAGCAGCCGTTCCCCAGGGGGCAGGAAGTAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAACGAAGATGGGCACTaGGCACTGTGCTCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: QGASTNRGRPGELNPCPENEDGH*ALCSGE
Trigger: CTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCTGGTTTCTGCACGCTaGCCGGGTTTCTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELVSAR*PGFCTL
Trigger: CAGAGTGCAGAAACCCGGTCAGCGTGCAGAAACCAG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGAGGCCTGGGGAGTTaGATCCTTGCCCCGAAGCTG +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGGGLGS*ILAPKL
Trigger: CAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGCACTGGGCACTGTaGTCAGGGGAGCCTACTTCC +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGGHWAL*SGEPTS
Trigger: GGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTCCTTGCTGCCGCTGTaGAGATGGGCCGTTCATCAG +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSLLPL*RWAVHQ
Trigger: CTGATGAACGGCCCATCTGCACAGCGGCAGCAAGGA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATCCTGGCCAGACTCCTaGCCTATCCTCCCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSWPDS*PILPGS
Trigger: AGAGCCGGGGAGGATAGGGCAGGAGTCTGGCCAGGA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTTCTCTCAAGGACCCTaGTGCTGCCCCCAGACTTGG +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGFSQGP*CCPQTW
Trigger: CCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGAGAA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGACACACAGGTGTCTTaGCTGGCTTTCCAGACCTGG +
Preference number: 2 (lower is better)
Translates to: PGELNPCPEAAYAETAEPDTQVS*LAFQTW
Trigger: CCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGCTATGGTCAGCGGCTaGTGGGAGCCAAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEAMVSG*WEPRSQ
Trigger: CTGGCTCCTTGGCTCCCAGCAGCCGCTGACCATAGC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAACGAAGATGGGCACTaGGCACTGTGCTCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAENEDGH*ALCSGE
Trigger: CTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAACGAAGATGGGCACTaGGCACTGTGCTCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGNEDGH*ALCSGE
Trigger: CTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCCTCTCCAGGGTAACTaGCATAGATGGCGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGPLQGN*HRWRQG
Trigger: GCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCATCAGCAGACAGCTaGTTTCTGCACGCTGACCGG +
Preference number: 2 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSSADS*FLHADR
Trigger: CCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGATGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCTGCCGCTGTGCAGATaGGCCGTTCATCAGCAGACA +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELPLCR*AVHQQT
Trigger: TGTCTGCTGATGAACGGCCCATCTGCACAGCGGCAG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTTGACCTTGGGCTCCTaGCCAGACTCCTGCCCTATC +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELTLGS*PDSCPI
Trigger: GATAGGGCAGGAGTCTGGCCAGGAGCCCAAGGTCAA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGTGGGGAACAGGGCATaGAGCATCCTTCATGCGCAC +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGVGNRA*SILHAH
Trigger: GTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCAC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTGCACTCTGACCGCATaGTGGGATGTGTCCTACTGT +
Preference number: 2 (lower is better)
Translates to: PGELNPCPEAAYAETAEPCTLTA*WDVSYC
Trigger: ACAGTAGGACACATCCCATCATGCGGTCAGAGTGCA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp TCCCCAAATGTCAGGAGCACTTGTTCTCAGTGCTACAGTCGACATTCCTGCCAGGCCCCTGCCTCTCAGTaGAGACCCTGGCGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: SPNVRSTCSQCYSRHSCQAPASQ*RPWRGL
Trigger: GAGGCCACGCCAGGGTCTTCACTGAGAGGCAGGGGC...CTGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTGACATTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCAGACAGCTGGTTTCTaGACGCTGACCGGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGQTAGF*TLTGFL
Trigger: CAGAAACCCGGTCAGCGTGCAGAAACCAGCTGTCTG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTGGGGTAATCCTTGCTaGCGCTGTGCAGATGGGCCG +
Preference number: 2 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCWGNPC*RCADGP
Trigger: CGGCCCATCTGCACAGCGGCAGCAAGGATTACCCCA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCCTTGGGGTAATCCTTaGTGCCGCTGTGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGPWGNP*CRCADG
Trigger: CCCATCTGCACAGCGGCAGCAAGGATTACCCCAAGG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACAAGGACCCTGCTGCTaGCCCCAGACTTGGCATCCT +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGQGPCC*PQTWHP
Trigger: AGGATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCAAGGACCCTGCTGCTaGCCCCAGACTTGGCATCCT +
Preference number: 2 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCQGPCC*PQTWHP
Trigger: AGGATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGGGAGTTGAATCCTTaGCCCGAAGCTGCCTACGCG +
Preference number: 2 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCGELNP*PEAAYA
Trigger: CGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGACCTGCCAGGTCTTTTaGTGGCTATGGTCAGCGGCT +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGTCQVF*WLWSAA
Trigger: AGCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCCAGGGGTAGGCTCCTaGCTCTGTCAGCCTCCATTG +
Preference number: 2 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCPGVGS*LCQPPL
Trigger: CAATGGAGGCTGACAGAGGCAGGAGCCTACCCCTGG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCTCTCCAGGGTAACTaGCATAGATGGCGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEPLQGN*HRWRQG
Trigger: GCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCATCTCTTCTCTGTGTaGGGAACAGGGCATGAAGCA +
Preference number: 2 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHLFSV*GTGHEA
Trigger: TGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCACAGGTGTCTTGCCTaGCTTTCCAGACCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGHRCLA*LSRPGH
Trigger: GTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTGTG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCAACCGTGGGAGGCCTaGGGAGTTGAATCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCQPWEA*GVESLP
Trigger: GGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACAACCGTGGGAGGCCTaGGGAGTTGAATCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGQPWEA*GVESLP
Trigger: GGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGGCAGGGCGAGGGCCTaGGTCCCAGCAGTAGCAGAC +
Preference number: 2 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSGRARA*VPAVAD
Trigger: GTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCAGACAGCTGGTTTCTaGACGCTGACCGGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGQTAGF*TLTGFL
Trigger: CAGAAACCCGGTCAGCGTGCAGAAACCAGCTGTCTG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACCTTGGGGTAATCCTTaGTGCCGCTGTGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGPWGNP*CRCADG
Trigger: CCCATCTGCACAGCGGCAGCAAGGATTACCCCAAGG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTCCTGGCCAGACTCCTaGCCTATCCTCCCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASWPDS*PILPGS
Trigger: AGAGCCGGGGAGGATAGGGCAGGAGTCTGGCCAGGA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATTCTCTCAAGGACCCTaGTGCTGCCCCCAGACTTGG +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGFSQGP*CCPQTW
Trigger: CCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGAGAA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCAGACCTGGCCACAGTaGTACTGTAGAGATTCATCG +
Preference number: 2 (lower is better)
Translates to: PGELNPCPEAAYAETAEPQTWPQ*YCRDSS
Trigger: CGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACATCTCTTCTCTGTGTaGGGAACAGGGCATGAAGCA +
Preference number: 2 (lower is better)
Translates to: QGASTNRGRPGELNPCPEHLFSV*GTGHEA
Trigger: TGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTCATCAGCAGACAGCTaGTTTCTGCACGCTGACCGG +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSSADS*FLHADR
Trigger: CCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGATGA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAACTTGGCATCCTGTCTaGGCCACAGACTTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: QGASTNRGRPGELNPCPETWHPV*ATDLSS
Trigger: AGAAGACAAGTCTGTGGCCCAGACAGGATGCCAAGT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTGGTGTAGTGGACTTTaGGGCAGACTGATCTGGGTT +
Preference number: 2 (lower is better)
Translates to: PGELNPCPEAAYAETAEPWCSGL*GRLIWV
Trigger: AACCCAGATCAGTCTGCCCCAAAGTCCACTACACCA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCTGGCTTTCCAGACCTaGCCACAGTGCTACTGTAGA +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELAFQT*PQCYCR
Trigger: TCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCTGGCTTTCCAGACCTaGCCACAGTGCTACTGTAGA +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGLAFQT*PQCYCR
Trigger: TCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTCTTTTGCTGGCTATaGTCAGCGGCTGCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGVFCWL*SAAAGS
Trigger: GCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGAC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCCACTCGCAAGGAGCTaGAGAGGTGTGACTTTCAGC +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGPLARS*RGVTFS
Trigger: GCTGAAAGTCACACCTCTCCAGCTCCTTGCGAGTGG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCGGGTTTCTGCACTCTaGCCGCATGATGGGATGTGT +
Preference number: 2 (lower is better)
Translates to: WVPHQQVLLEHLMELYKERVSAL*PHDGMC
Trigger: ACACATCCCATCATGCGGTCAGAGTGCAGAAACCCG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACAGACAGCTGGTTTCTaGACGCTGACCGGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGQTAGF*TLTGFL
Trigger: CAGAAACCCGGTCAGCGTGCAGAAACCAGCTGTCTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGACACACAGGTGTCTTaGCTGGCTTTCCAGACCTGG +
Preference number: 2 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCDTQVS*LAFQTW
Trigger: CCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATTCCAATCTAGAATTTaGTTAAGAACCAGGTGTCGC +
Preference number: 2 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSFQSRI*LRTRCR
Trigger: GCGACACCTGGTTCTTAAGCAAATTCTAGATTGGAA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTCATCAGCAGACAGCTaGTTTCTGCACGCTGACCGG +
Preference number: 2 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSSADS*FLHADR
Trigger: CCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGATGA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGACTTGGCATCCTGTCTaGGCCACAGACTTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: ALFPSKPLEVERNVRGAETWHPV*ATDLSS
Trigger: AGAAGACAAGTCTGTGGCCCAGACAGGATGCCAAGT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGACTTGGCATCCTGTCTaGGCCACAGACTTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGTWHPV*ATDLSS
Trigger: AGAAGACAAGTCTGTGGCCCAGACAGGATGCCAAGT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTGGGGCAGACTGATCTaGGTTTGCATTCTGACTCCA +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGWGRLI*VCILTP
Trigger: TGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTGGTGTAGTGGACTTTaGGGCAGACTGATCTGGGTT +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGWCSGL*GRLIWV
Trigger: AACCCAGATCAGTCTGCCCCAAAGTCCACTACACCA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTGCCAGGTCTTTTGCTaGCTATGGTCAGCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: WVPHQQVLLEHLMELYKECQVFC*LWSAAA
Trigger: AGCAGCCGCTGACCATAGCCAGCAAAAGACCTGGCA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTGTGTCTGCTGGAAATaGACGCCTCTCACTTTCCTC +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGCVCWK*TPLTFL
Trigger: GAGGAAAGTGAGAGGCGTCCATTTCCAGCAGACACA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAGTGTGAGTGTGTCTaGATTGGCCCTCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGECECV*IGPLPP
Trigger: TGGAGGGAGAGGGCCAATCCAGACACACTCACACTC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 90 bp ACTTTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTaGCTGGCTATGGTCAGCGGCTGCTGGGAGCCAAGGAGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: TFSHSVVLIQDLPGL*LAMVSGCWEPRSQH
Trigger: GTGCTGGCTCCTTGGCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTATTGTTTTGAAAGCTaGCCGTACCTCCCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: APRASHGTLQGDAGEGWGYCFES*PYLPLF
Trigger: GAAGAGGGGGAGGTACGGTCAGCTTTCAAAACAATA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCTGGTTTCTGCACGCTaGCCGGGTTTCTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLALVSAR*PGFCTL
Trigger: CAGAGTGCAGAAACCCGGTCAGCGTGCAGAAACCAG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp CCCTTCCACCCTGCTGGATTAGATGGTGTCAGGGGTGGCAATGACGGTGAGCAGAGGGTAAGACGGTGTTaGAGAGCATCCCCAAATGTC +
Preference number: 2 (lower is better)
Translates to: PFHPAGLDGVRGGNDGEQRVRRC*RASPNV
Trigger: GACATTTGGGGATGCTCTTCAACACCGTCTTACCCT...CTGCTCACCGTCATTGCCACCCCTGACACCATCTAATCCAGCAGGGTGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGGCACTGGGCACTGTaGTCAGGGGAGCCTACTTCC +
Preference number: 2 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGHWAL*SGEPTS
Trigger: GGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTCTCAAGGACCCTGCTaGTGCCCCCAGACTTGGCAT +
Preference number: 2 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASQGPC*CPQTWH
Trigger: ATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCAGACCTGGCCACAGTaGTACTGTAGAGATTCATCG +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGQTWPQ*YCRDSS
Trigger: CGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCTGGGGAACGGCTGCTaGAGGCGGGGCTCTCGGTGG +
Preference number: 2 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPLGNGC*RRGSRW
Trigger: CCACCGAGAGCCCCGCCTCCAGCAGCCGTTCCCCAG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGAGACGAACGAAGATaGGCACTGGGCACTGTGCTC +
Preference number: 2 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGDERR*ALGTVL
Trigger: GAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGGTAACTGGCATAGATaGCGGCAGGGCGAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLGNWHR*RQGEGL
Trigger: CAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGCAGACTGATCTaGGTTTGCATTCTGACTCCA +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGWGRLI*VCILTP
Trigger: TGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGGCAGGGCGAGGGCCTaGGTCCCAGCAGTAGCAGAC +
Preference number: 2 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPGRARA*VPAVAD
Trigger: GTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACACAGATCCACAAGTTaGTTTGCTATTTTAAATCCA +
Preference number: 2 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSHRSTS*FAILNP
Trigger: TGGATTTAAAATAGCAAAGCAACTTGTGGATCTGTG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCAGACCTGGCCACAGTaGTACTGTAGAGATTCATCG +
Preference number: 2 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEQTWPQ*YCRDSS
Trigger: CGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGTAACTGGCATAGATaGCGGCAGGGCGAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGNWHR*RQGEGL
Trigger: CAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTCCATTGTGTCTGCTaGAAATGGACGCCTCTCACT +
Preference number: 2 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELHCVC*KWTPLT
Trigger: AGTGAGAGGCGTCCATTTCCAGCAGACACAATGGAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACAGATACTGCGGAGGCTaGGTTCTGTTTCCAGTTCTA +
Preference number: 2 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHRYCGG*VLFPVL
Trigger: TAGAACTGGAAACAGAACCCAGCCTCCGCAGTATCT...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 90 bp ATGTCTGGGTCTGAGCCTGGTGGGCTTTGTCCCAGTGGTGTCTCCTaGCTCTTAAGGATCACCAAGAAGGGTAAGACGGTGTTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: MSGSEPGGLCPSGVS*LLRITKKGKTVLKS
Trigger: GCTCTTCAACACCGTCTTACCCTTCTTGGTGATCCTTAAGAGCAAGGAGACACCACTGGGACAAAGCCCACCAGGCTCAGACCCAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGTGGGGAACAGGGCATaGAGCATCCTTCATGCGCAC +
Preference number: 2 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSVGNRA*SILHAH
Trigger: GTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCAC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGTGGGGAACAGGGCATaGAGCATCCTTCATGCGCAC +
Preference number: 2 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTVGNRA*SILHAH
Trigger: GTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCAC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGTACTGGGGCAGGCTTaGTCCCCTGTTCTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSVLGQA*SPVLSR
Trigger: CCTTGAGAGAACAGGGGAGCAAGCCTGCCCCAGTAC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCTCTGTCTTTACCTTTaGAGGCTTCTGTTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLCLYL*RLLFSH
Trigger: ATGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGTACTGTAGCAGATACTaGAGCAGATACTGCGGAGGC +
Preference number: 2 (lower is better)
Translates to: ISGATGVPNERGMGTEQMYCSRY*SRYCGG
Trigger: GCCTCCGCAGTATCTGCTGCAGTATCTGCTACAGTA...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAACGAAGATGGGCACTaGGCACTGTGCTCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSNEDGH*ALCSGE
Trigger: CTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCCTCTCCAGGGTAACTaGCATAGATGGCGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMPLQGN*HRWRQG
Trigger: GCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTGACCTTGGGCTCCTaGCCAGACTCCTGCCCTATC +
Preference number: 2 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLTLGS*PDSCPI
Trigger: GATAGGGCAGGAGTCTGGCCAGGAGCCCAAGGTCAA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCTCTCACTTTCCTCTaGCCACTCTTAACATCAGTC +
Preference number: 2 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEPLTFL*PLLTSV
Trigger: GACTGATGTTAAGAGTGGCCAGAGGAAAGTGAGAGG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCTGGTTTCTGCACGCTaGCCGGGTTTCTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMLVSAR*PGFCTL
Trigger: CAGAGTGCAGAAACCCGGTCAGCGTGCAGAAACCAG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCACAGATCCACAAGTTaGTTTGCTATTTTAAATCCA +
Preference number: 2 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHRSTS*FAILNP
Trigger: TGGATTTAAAATAGCAAAGCAACTTGTGGATCTGTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCCTTGGGGTAATCCTTaGTGCCGCTGTGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMPWGNP*CRCADG
Trigger: CCCATCTGCACAGCGGCAGCAAGGATTACCCCAAGG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATCCCCAAATGTCAGGAGCACTTGTTCTCAGTGCTACAGTCGACATTCCTGCCAGCTGTTGTTACAACCTaGAAGGTTCCCAGGGACGGG +
Preference number: 2 (lower is better)
Translates to: IPKCQEHLFSVLQSTFLPAVVTT*KVPRDG
Trigger: CCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGC...TGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTGACATTTGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCATCTCTTCTCTGTGTaGGGAACAGGGCATGAAGCA +
Preference number: 2 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAHLFSV*GTGHEA
Trigger: TGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 90 bp AAGGGGGAAGGGAGCATAAGAAATTGGGAGGGGAGCTTCCTGCACTaGTTTCCAGCCAAGGAAAGAGATGAGAGTGTGAGTGTGTCTGGA +
Preference number: 2 (lower is better)
Translates to: KGEGSIRNWEGSFLH*FPAKERDESVSVSG
Trigger: TCCAGACACACTCACACTCTCATCTCTTTCCTTGGCTGGAAACAAGTGCAGGAAGCTCCCCTCCCAATTTCTTATGCTCCCTTCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTTTCAATATGTGACATaGATCTCTGAGGCCAGCATG +
Preference number: 2 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEFQYVT*ISEASM
Trigger: CATGCTGGCCTCAGAGATTCATGTCACATATTGAAA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCAAGGACCCTGCTGCTaGCCCCAGACTTGGCATCCT +
Preference number: 2 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPQGPCC*PQTWHP
Trigger: AGGATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCTCTGTCTTTACCTTTaGAGGCTTCTGTTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGLCLYL*RLLFSH
Trigger: ATGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACTCTTCCATAGGACGTaGATGAAGGAGAGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLFHRT*MKERCV
Trigger: CACACACCTCTCCTTCATTCACGTCCTATGGAAGAG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCTCTTCCATAGGACGTaGATGAAGGAGAGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLLFHRT*MKERCV
Trigger: CACACACCTCTCCTTCATTCACGTCCTATGGAAGAG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAATGAAGCATCCTTCATaGGCACTTCTAGTTTTGAAG +
Preference number: 2 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGMKHPS*ALLVLK
Trigger: CTTCAAAACTAGAAGTGCGCATGAAGGATGCTTCAT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGTACTGGGGCAGGCTTaGTCCCCTGTTCTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPVLGQA*SPVLSR
Trigger: CCTTGAGAGAACAGGGGAGCAAGCCTGCCCCAGTAC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTCTGTCTTTACCTTTaGAGGCTTCTGTTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLCLYL*RLLFSH
Trigger: ATGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATGTCTGGGTCTGAGCCTGGTGGGCTTTGTCCCAGTGGTGTCTCCTTGCTCTTAATAAACCAACCAGAGTaGAGCTGTTGTTACAACCTG +
Preference number: 2 (lower is better)
Translates to: MSGSEPGGLCPSGVSLLLINQPE*SCCYNL
Trigger: CAGGTTGTAACAACAGCTGCACTCTGGTTGGTTTAT...TAAGAGCAAGGAGACACCACTGGGACAAAGCCCACCAGGCTCAGACCCAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGGAGACGAACGAAGATaGGCACTGGGCACTGTGCTC +
Preference number: 2 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPGDERR*ALGTVL
Trigger: GAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTCC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 90 bp AAGGGTAAGACGGTGTTGAAGAGCATCCCCAAATGTCAGGAGCACTaGTTCTCAGTGCTACAGTCGACATTCCTGCCAGAAATAAGGACC +
Preference number: 2 (lower is better)
Translates to: KGKTVLKSIPKCQEH*FSVLQSTFLPEIRT
Trigger: GGTCCTTATTTCTGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGTCTTACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATCCATAGGACGTGAATaGAGGAGAGGTGTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTSIGRE*RRGVCV
Trigger: AACACACACACCTCTCCTTCATTCACGTCCTATGGA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATATTGTTTTGAAAGCTaGCCGTACCTCCCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTYCFES*PYLPLF
Trigger: GAAGAGGGGGAGGTACGGTCAGCTTTCAAAACAATA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTATTGTTTTGAAAGCTaGCCGTACCTCCCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSYCFES*PYLPLF
Trigger: GAAGAGGGGGAGGTACGGTCAGCTTTCAAAACAATA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATCCTGGCCAGACTCCTaGCCTATCCTCCCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSWPDS*PILPGS
Trigger: AGAGCCGGGGAGGATAGGGCAGGAGTCTGGCCAGGA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGAAAGTGGCCCTAAATaGTATACTTTGATTCCTAAA +
Preference number: 2 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGESGPK*YTLIPK
Trigger: TTTAGGAATCAAAGTATAGCATTTAGGGCCACTTTC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGGTAACTGGCATAGATaGCGGCAGGGCGAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPGNWHR*RQGEGL
Trigger: CAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGACTTGGCATCCTGTCTaGGCCACAGACTTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMTWHPV*ATDLSS
Trigger: AGAAGACAAGTCTGTGGCCCAGACAGGATGCCAAGT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTGGTGTAGTGGACTTTaGGGCAGACTGATCTGGGTT +
Preference number: 2 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMWCSGL*GRLIWV
Trigger: AACCCAGATCAGTCTGCCCCAAAGTCCACTACACCA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAAGGACCCTGCTGCTaGCCCCAGACTTGGCATCCT +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQGPCC*PQTWHP
Trigger: AGGATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTTCTGATTGCCCCTGCTaGAGTCAGCTCAGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLSDCPC*SQLRCP
Trigger: TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGA...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR-3UTR CCA 90 bp AGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCTGGACGATAGCTCCTaGGAATGGCAGTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: RLQCGDSVGLFYKGTNPILDDSS*EWQSQL
Trigger: CAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAG...AATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR TCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCAAGAGAGAACATCTaGTTGCCCCTGCTGCAGTCA +
Preference number: 2 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLPRENI*LPLLQS
Trigger: TGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGG...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATCTCAAGGACCCTGCTaGTGCCCCCAGACTTGGCAT +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSQGPC*CPQTWH
Trigger: ATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACTGCCGCTGTGCAGATaGGCCGTTCATCAGCAGACA +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLPLCR*AVHQQT
Trigger: TGTCTGCTGATGAACGGCCCATCTGCACAGCGGCAG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp AGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTGATAGCTCCTGGGAATaGCAGTCACAGCTGCTTAGG +
Preference number: 2 (lower is better)
Translates to: RLQCGDSVGLFYKGTNPIDSSWE*QSQLLR
Trigger: CCTAAGCAGCTGTGACTGCCATTCCCAGGAGCTATC...AATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR CCA 90 bp GTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGCAGGAACAAGAGACCTaGCCTACCACCAAGGTAACT +
Preference number: 2 (lower is better)
Translates to: VILWVSFIKALIPFMRALQEQET*PTTKVT
Trigger: AGTTACCTTGGTGGTAGGCCAGGTCTCTTGTTCCTG...CAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 90 bp ATACTGCGGAGGCTGGGTTCTGTTTCCAGTTCTATCCACATGGTTTaGGGCAAGTACTTGAGCCTTCCTTTGCCCTATTTCTTCATTTGT +
Preference number: 2 (lower is better)
Translates to: ILRRLGSVSSSIHMV*GKYLSLPLPYFFIC
Trigger: ACAAATGAAGAAATAGGGCAAAGGAAGGCTCAAGTACTTGCCCAAAACCATGTGGATAGAACTGGAAACAGAACCCAGCCTCCGCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR TCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAGTCACAAGTCAAAATaGCAGAGCCTTAAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTSHKSK*QSLKAW
Trigger: CCAGGCTTTAAGGCTCTGTCATTTTGACTTGTGACT...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAGACAGCTGGTTTCTaGACGCTGACCGGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQTAGF*TLTGFL
Trigger: CAGAAACCCGGTCAGCGTGCAGAAACCAGCTGTCTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAACCTGCCAGGTCTTTTaGTGGCTATGGTCAGCGGCT +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPTCQVF*WLWSAA
Trigger: AGCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 90 bp CTGGGTTCTGTTTCCAGTTCTATCCACATGGTTTTGGGCAAGTACTaGAGCCTTCCTTTGCCCTATTTCTTCATTTGTAAAGTGGGGGTT +
Preference number: 2 (lower is better)
Translates to: LGSVSSSIHMVLGKY*SLPLPYFFICKVGV
Trigger: AACCCCCACTTTACAAATGAAGAAATAGGGCAAAGGAAGGCTCAAGTACTTGCCCAAAACCATGTGGATAGAACTGGAAACAGAACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR TCA 90 bp AGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTGGCAAGCACTCTCAATaGAAGACCTTGCTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: RLQCGDSVGLFYKGTNPIGKHSQ*KTLLRR
Trigger: TCTTCTCAGCAAGGTCTTTCATTGAGAGTGCTTGCC...AATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR GCA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATTACTGCAGCAGATACTaGGGAGGCTGGGTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNYCSRY*GGWVLF
Trigger: AAACAGAACCCAGCCTCCGCAGTATCTGCTGCAGTA...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGGAGACGAACGAAGATaGGCACTGGGCACTGTGCTC +
Preference number: 2 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMGDERR*ALGTVL
Trigger: GAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTCC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCTGCCGCTGTGCAGATaGGCCGTTCATCAGCAGACA +
Preference number: 2 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMLPLCR*AVHQQT
Trigger: TGTCTGCTGATGAACGGCCCATCTGCACAGCGGCAG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACTGGCTTTCCAGACCTaGCCACAGTGCTACTGTAGA +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLAFQT*PQCYCR
Trigger: TCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGTCTTTTGCTGGCTATaGTCAGCGGCTGCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMVFCWL*SAAAGS
Trigger: GCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGAC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACTCTTCCATAGGACGTaGATGAAGGAGAGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLFHRT*MKERCV
Trigger: CACACACCTCTCCTTCATTCACGTCCTATGGAAGAG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCTTTTGGGCAAGTACTTaGGCCTTCCTTTGCCCTATT +
Preference number: 2 (lower is better)
Translates to: FIKALIPFMRALLSDLIAFWAST*AFLCPI
Trigger: AATAGGGCAAAGGAAGGCTCAAGTACTTGCCCAAAA...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAGACCTGGCCACAGTaGTACTGTAGAGATTCATCG +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQTWPQ*YCRDSS
Trigger: CGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGACACACAGGTGTCTTaGCTGGCTTTCCAGACCTGG +
Preference number: 2 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMDTQVS*LAFQTW
Trigger: CCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR GCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTGTGTGTTTCTGCAAGTaGACGCATGATGTAATAACA +
Preference number: 2 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTVCFCK*THDVIT
Trigger: TGTTATTACATCATGCGTGCACTTGCAGAAACACAC...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 90 bp TCCAGTTCTATCCACATGGTTTTGGGCAAGTACTTGAGCCTTCCTTaGCCCTATTTCTTCATTTGTAAAGTGGGGGTTAGAATATTTGCC +
Preference number: 2 (lower is better)
Translates to: SSSIHMVLGKYLSLP*PYFFICKVGVRIFA
Trigger: GGCAAATATTCTAACCCCCACTTTACAAATGAAGAAATAGGGCAAAGGAAGGCTCAAGTACTTGCCCAAAACCATGTGGATAGAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 90 bp AATGACAGACAAAGTTACATAGCTTGCATGTGTCAGAGCCAAGGTTaGAACCCGTCTGTGACTCTGAAGTCCATACTCTTATCACTCTAT +
Preference number: 2 (lower is better)
Translates to: NDRQSYIACMCQSQG*NPSVTLKSILLSLY
Trigger: ATAGAGTGATAAGAGTATGGACTTCAGAGTCACAGACGGGTTCAAACCTTGGCTCTGACACATGCAAGCTATGTAACTTTGTCTGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATATTGTTTTGAAAGCTaGCCGTACCTCCCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPYCFES*PYLPLF
Trigger: GAAGAGGGGGAGGTACGGTCAGCTTTCAAAACAATA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTGCACTCTGACCGCATaGTGGGATGTGTCCTACTGT +
Preference number: 2 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMCTLTA*WDVSYC
Trigger: ACAGTAGGACACATCCCATCATGCGGTCAGAGTGCA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 90 bp CACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTaGGTCCACATGGAAAGTAGAAGAGCAGCAATCCATTGCACTTGG +
Preference number: 2 (lower is better)
Translates to: HFSIILFLHIGLFYF*VHMESRRAAIHCTW
Trigger: CCAAGTGCAATGGATTGCTGCTCTTCTACTTTCCATGTGGACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR-3UTR TCA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCAATGAAAGACCTTGCTaGGAAGAACTTGGAAATAAG +
Preference number: 2 (lower is better)
Translates to: FIKALIPFMRALLSDLIANERPC*EELGNK
Trigger: CTTATTTCCAAGTTCTTCTCAGCAAGGTCTTTCATT...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR CCA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTACTCTTATCACTCTATaGGAAAGTCACAAGTCAAAA +
Preference number: 2 (lower is better)
Translates to: LWVSFIKALIPFMRALLSTLITL*ESHKSK
Trigger: TTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGT...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR CCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAGCAATCCATTGCACTTaGATTTTTATCTTTTCAGGA +
Preference number: 2 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKAIHCT*IFIFSG
Trigger: TCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGC...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR CAA 90 bp TCTCATCTGTCAAAGGGGAATAACAAATCCTACATTTTGGTGTTATaGTGCAGACTAGAAATACTACAGGTAAAGTGTCAGGCACAGAGA +
Preference number: 2 (lower is better)
Translates to: SHLSKGNNKSYILVL*CRLEILQVKCQAQR
Trigger: TCTCTGTGCCTGACACTTTACCTGTAGTATTTCTAGTCTGCACAATAACACCAAAATGTAGGATTTGTTATTCCCCTTTGACAGATGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 90 bp TTCCTTTGCCCTATTTCTTCATTTGTAAAGTGGGGGTTAGAATATTaGCCTTACTACCTCACAGAATTCTTACAGGTCACAAACTCCAAG +
Preference number: 2 (lower is better)
Translates to: FLCPISSFVKWGLEY*PYYLTEFLQVTNSK
Trigger: CTTGGAGTTTGTGACCTGTAAGAATTCTGTGAGGTAGTAAGGCAAATATTCTAACCCCCACTTTACAAATGAAGAAATAGGGCAAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 90 bp AGGAAATTTTTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATaGTTCTACTTTTTGGTCCACATGGAAAGTAGAAGAGCAGCAATC +
Preference number: 2 (lower is better)
Translates to: RKFFHFSIILFLHIG*FYFLVHMESRRAAI
Trigger: GATTGCTGCTCTTCTACTTTCCATGTGGACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAAAAATTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACTGCTGCCCCCAGACTaGGCATCCTGTCTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSLLPPD*ASCLGH
Trigger: GTGGCCCAGACAGGATGCCAAGTCTGGGGGCAGCAG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATGGGGAGTTGAATCCTaGCCCCGAAGCTGCCTACGC +
Preference number: 3 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSWGVES*PRSCLR
Trigger: GCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp CACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATaGCGGCAGGGCGAGGGCCTGAGTCCCAGCAGTAGC +
Preference number: 3 (lower is better)
Translates to: HGRSPLQGNWHR*RQGEGLSPSSS
Trigger: GCTACTGCTGGGACTCAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp TGGGAGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTaGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGC +
Preference number: 3 (lower is better)
Translates to: WEPRSQHQPWEA*GVESLPRSCLR
Trigger: GCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCTCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 72 bp AGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTaGCCCGAAGCTGCCTACGCGGAGACAGCAGAACCC +
Preference number: 3 (lower is better)
Translates to: STNRGRPGELNP*PEAAYAETAEP
Trigger: GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 72 bp GACCTGCCAGGTCTTTTGCTGGCTATGGTCAGCGGCTaGTGGGAGCCAAGGAGCCAGCACCAACCGTGGGAG +
Preference number: 3 (lower is better)
Translates to: DLPGLLLAMVSG*WEPRSQHQPWE
Trigger: CTCCCACGGTTGGTGCTGGCTCCTTGGCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGGAGGCCTGGGGAGTaGAATCCTTGCCCCGAAGCT +
Preference number: 3 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGRPGE*NPCPEA
Trigger: AGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 24 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp GCAGACACAGGCAAGGAGACGAACGAAGATGGGCACTaGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCC +
Preference number: 3 (lower is better)
Translates to: ADTGKETNEDGH*ALCSGEPTSCP
Trigger: GGGGCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTCCTTGCCTGTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTGCTGCCCCCAGACTaGGCATCCTGTCTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLLPPD*ASCLGH
Trigger: GTGGCCCAGACAGGATGCCAAGTCTGGGGGCAGCAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGACCTGCCAGGTCTTTaGCTGGCTATGGTCAGCGGC +
Preference number: 3 (lower is better)
Translates to: APRASHGTLQGDAGEGWGDLPGL*LAMVSG
Trigger: GCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGTC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGGAGGCCTGGGGAGTaGAATCCTTGCCCCGAAGCT +
Preference number: 3 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCGRPGE*NPCPEA
Trigger: AGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATGTCTTCTCTTCTCTTaGTCAGTTGACAGCCAGACT +
Preference number: 3 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSCLLFS*SVDSQT
Trigger: AGTCTGGCTGTCAACTGACAAAGAGAAGAGAAGACA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGATAGCCATTGTTTTTaGGGTACTGGGGCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: SQGASTNRGRPGELNPCPDSHCF*GTGAGL
Trigger: CAAGCCTGCCCCAGTACCCAAAAAACAATGGCTATC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACCTGCCAGGTCTTTaGCTGGCTATGGTCAGCGGC +
Preference number: 3 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGDLPGL*LAMVSG
Trigger: GCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGTC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTACAGGGGCTTAAGCTaGTGGGGGCCTTCCCGAGGA +
Preference number: 3 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEYRGLS*WGPSRG
Trigger: TCCTCGGGAAGGCCCCCACAAGCTTAAGCCCCTGTA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGATAGCCATTGTTTTTaGGGTACTGGGGCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: QGASTNRGRPGELNPCPEDSHCF*GTGAGL
Trigger: CAAGCCTGCCCCAGTACCCAAAAAACAATGGCTATC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGATAGCCATTGTTTTTaGGGTACTGGGGCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: PGELNPCPEAAYAETAEPDSHCF*GTGAGL
Trigger: CAAGCCTGCCCCAGTACCCAAAAAACAATGGCTATC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAACTCTGTCTTTACCTTaGCAGGCTTCTGTTTTCTCA +
Preference number: 3 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSTLSLP*QASVFS
Trigger: TGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAGT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGGGAGCATAAGAAATaGGGAGGGGAGCTTCCTGCA +
Preference number: 3 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEREHKK*GGELPA
Trigger: TGCAGGAAGCTCCCCTCCCAATTTCTTATGCTCCCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 72 bp TGCAGATGGGCCGTTCATCAGCAGACAGCTGGTTTCTaGACGCTGACCGGGTTTCTGCACTCTGACCGCATG +
Preference number: 3 (lower is better)
Translates to: CRWAVHQQTAGF*TLTGFLHSDRM
Trigger: CATGCGGTCAGAGTGCAGAAACCCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGATGAACGGCCCATCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 72 bp GATGCCCAGCAGAGTGCTGGGTGCCCCACCAGCAGGTaGTCCTCGAGCATCTCATGGAACTTTACAAGGAGA +
Preference number: 3 (lower is better)
Translates to: DAQQSAGCPTSR*SSSISWNFTRR
Trigger: TCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAGCACTCTGCTGGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp AGCAGTAGCAGACACAGGCAAGGAGACGAACGAAGATaGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTC +
Preference number: 3 (lower is better)
Translates to: SSSRHRQGDERR*ALGTVLRGAYF
Trigger: GAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTCCTTGCCTGTGTCTGCTACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp AGAGGGCGGAGTCTCATTCCCACATTGCACTCACCCTaGACGATAGCTCCTGGGAATGGCAGTCACAGCTGC +
Preference number: 3 (lower is better)
Translates to: RGRSLIPTLHSP*TIAPGNGSHSC
Trigger: GCAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTGGGAATGAGACTCCGCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGTCTGGGCCACAGACTaGTCTTCTCTTCTCTTTGTC +
Preference number: 3 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEVWATD*SSLLFV
Trigger: GACAAAGAGAAGAGAAGACAAGTCTGTGGCCCAGAC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCTGCTGCCCCCAGACTaGGCATCCTGTCTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLLPPD*ASCLGH
Trigger: GTGGCCCAGACAGGATGCCAAGTCTGGGGGCAGCAG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 72 bp CAGGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTaGTTCTTAGCTCTTTCCACTGAGAAGGCTTCAGTG +
Preference number: 3 (lower is better)
Translates to: QAIRPPRPLCFL*FLALSTEKASV
Trigger: CACTGAAGCCTTCTCAGTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CCA 72 bp GTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATaGAGAGGGCGGAGTCTCATTCCCACATTGCACTCA +
Preference number: 3 (lower is better)
Translates to: VCPMRGAWELSR*RGRSLIPTLHS
Trigger: TGAGTGCAATGTGGGAATGAGACTCCGCCCTCTCCATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CCA 72 bp TTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATaGGAACTGAGCAGATGGAGAGGGCGGAGTCTCATT +
Preference number: 3 (lower is better)
Translates to: LVERQVCPMRGA*ELSRWRGRSLI
Trigger: AATGAGACTCCGCCCTCTCCATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCAGCCAGACTTGACCTaGGGCTCCTGGCCAGACTCC +
Preference number: 3 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSQPDLT*GSWPDS
Trigger: GGAGTCTGGCCAGGAGCCCAAGGTCAAGTCTGGCTG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGTCTGGGCCACAGACTaGTCTTCTCTTCTCTTTGTC +
Preference number: 3 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGVWATD*SSLLFV
Trigger: GACAAAGAGAAGAGAAGACAAGTCTGTGGCCCAGAC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCAGACTGATCTGGGTTaGCATTCTGACTCCACACTT +
Preference number: 3 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEQTDLG*HSDSTL
Trigger: AAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp CAGCAGAACCCAGATAGGACACACAGGTGTCTTGCCTaGCTTTCCAGACCTGGCCACAGTGCTACTGTAGAG +
Preference number: 3 (lower is better)
Translates to: QQNPDRTHRCLA*LSRPGHSATVE
Trigger: CTCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTCCTATCTGGGTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTCTTCTCTTTGTCAGTaGACAGCCAGACTTGACCTT +
Preference number: 3 (lower is better)
Translates to: ALFPSKPLEVERNVRGAESSLCQ*TARLDL
Trigger: AAGGTCAAGTCTGGCTGTCAACTGACAAAGAGAAGA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTGTCTTCTCTTCTCTTaGTCAGTTGACAGCCAGACT +
Preference number: 3 (lower is better)
Translates to: APRASHGTLQGDAGEGWGCLLFS*SVDSQT
Trigger: AGTCTGGCTGTCAACTGACAAAGAGAAGAGAAGACA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCAGCCACTCTGTTGTTTaGATTCAGGACCTGCCAGGT +
Preference number: 3 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSHSVV*IQDLPG
Trigger: ACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR TCA 72 bp AGCTGGTTTCTGCACGCTGACCGGGTTTCTGCACTCTaGCCGCATGATGGGATGTGTCCTACTGTTACAGTC +
Preference number: 3 (lower is better)
Translates to: SWFLHADRVSAL*PHDGMCPTVTV
Trigger: GACTGTAACAGTAGGACACATCCCATCATGCGGTCAGAGTGCAGAAACCCGGTCAGCGTGCAGAAACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 72 bp CAGGTGTCTTGCCTGGCTTTCCAGACCTGGCCACAGTaGTACTGTAGAGATTCATCGGCTCCTCCCTTCTTA +
Preference number: 3 (lower is better)
Translates to: QVSCLAFQTWPQ*YCRDSSAPPFL
Trigger: TAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp TTTCCTCATGGGATGGTGATGGGTATATGGCGTAGATaGTGGGTGAAGGGCCTCATCTGCCCTGTTCCCTTC +
Preference number: 3 (lower is better)
Translates to: FPHGMVMGIWRR*WVKGLICPVPF
Trigger: GAAGGGAACAGGGCAGATGAGGCCCTTCACCCACCATCTACGCCATATACCCATCACCATCCCATGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCAGACTGATCTGGGTTaGCATTCTGACTCCACACTT +
Preference number: 3 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCQTDLG*HSDSTL
Trigger: AAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR TCA 72 bp CTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATCTaGTTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACC +
Preference number: 3 (lower is better)
Translates to: LGSYFNFPRENI*LPLLQSAQVST
Trigger: GGTGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR GCA 72 bp CTTAAAGCCTGGATTTCATTAGTGGAGCGACAGGTGTaGCCAATGAGAGGGGCATGGGAACTGAGCAGATGG +
Preference number: 3 (lower is better)
Translates to: LKAWISLVERQV*PMRGAWELSRW
Trigger: CCATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAATGAAATCCAGGCTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR GCA 72 bp GGTCCTATTTCAACTTCCCAAGAGAGAACATCTGATTaGCCCTGCTGCAGTCAGCTCAGGTGTCCACCTCTG +
Preference number: 3 (lower is better)
Translates to: GPISTSQERTSD*PCCSQLRCPPL
Trigger: CAGAGGTGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGTTGAAATAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCACACAGATCCACAAGTaGCTTTGCTATTTTAAATCC +
Preference number: 3 (lower is better)
Translates to: PGELNPCPEAAYAETAEPTQIHK*LCYFKS
Trigger: GGATTTAAAATAGCAAAGCAACTTGTGGATCTGTGT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGTCTGGGCCACAGACTaGTCTTCTCTTCTCTTTGTC +
Preference number: 3 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAVWATD*SSLLFV
Trigger: GACAAAGAGAAGAGAAGACAAGTCTGTGGCCCAGAC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp ACTGGAGGCTGGTGGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCTAAATGTCAGGAGCACTaGTTCTCAGTGCTACAGTCG +
Preference number: 3 (lower is better)
Translates to: TGGWWCLQPYKLDSPFHPKCQEH*FSVLQS
Trigger: CGACTGTAGCACTGAGAACAAGTGCTCCTGACATTT...AGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGCCTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR-3UTR CAA 90 bp ACTGGAGGCTGGTGGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCTAAGGGTAAGACGGTGTaGAAGAGCATCCCCAAATGT +
Preference number: 3 (lower is better)
Translates to: TGGWWCLQPYKLDSPFHPKGKTV*KSIPKC
Trigger: ACATTTGGGGATGCTCTTCAACACCGTCTTACCCTT...AGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGCCTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR TCA 72 bp TACTGGAGGCTGGTGGTGTCTACAGCCTTACAAACTTaGCAGTCCCTTCCACCCTGCTGGATTAGATGGTGT +
Preference number: 3 (lower is better)
Translates to: YWRLVVSTALQT*QSLPPCWIRWC
Trigger: ACACCATCTAATCCAGCAGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGCCTCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR CCA 72 bp CACATTGCACTCACCCTGGACGATAGCTCCTGGGAATaGCAGTCACAGCTGCTTAGGTTCTTTACATCCTTG +
Preference number: 3 (lower is better)
Translates to: HIALTLDDSSWE*QSQLLRFFTSL
Trigger: CAAGGATGTAAAGAACCTAAGCAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CCA 72 bp GTACAGGTGAAGGCTCAGGAACAGGAACAAGAGACCTaGCCTACCACCAAGGTAACTTTACACCAAGCCTGT +
Preference number: 3 (lower is better)
Translates to: VQVKAQEQEQET*PTTKVTLHQAC
Trigger: ACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAGGTCTCTTGTTCCTGTTCCTGAGCCTTCACCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR TCA 72 bp AAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTaGCCTAATTGCCTCCCAAGGCCCCACCTCCTAATA +
Preference number: 3 (lower is better)
Translates to: KGTNPIHEGSVV*PNCLPRPHLLI
Trigger: TATTAGGAGGTGGGGCCTTGGGAGGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR GCA 72 bp AGCAACGTTCCGAGGAGTAGAATAAACCAACCAGAGTaGAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: SNVPRSRINQPE*SCCYNLQGSQG
Trigger: TCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGCACTCTGGTTGGTTTATTCTACTCCTCGGAACGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR GCA 72 bp CAGAGCAGATACTGTAGCAGATACTGCAGCAGATACTaGGGAGGCTGGGTTCTGTTTCCAGTTCTATCCACA +
Preference number: 3 (lower is better)
Translates to: QSRYCSRYCSRY*GGWVLFPVLST
Trigger: TGTGGATAGAACTGGAAACAGAACCCAGCCTCCGCAGTATCTGCTGCAGTATCTGCTACAGTATCTGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR GCA 72 bp CCCTGGACGATAGCTCCTGGGAATGGCAGTCACAGCTaGTTAGGTTCTTTACATCCTTGTTTCTCTCTGTTG +
Preference number: 3 (lower is better)
Translates to: PWTIAPGNGSHS*LGSLHPCFSLL
Trigger: CAACAGAGAGAAACAAGGATGTAAAGAACCTAAGCAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACACAGATCCACAAGTaGCTTTGCTATTTTAAATCC +
Preference number: 3 (lower is better)
Translates to: WVPHQQVLLEHLMELYKETQIHK*LCYFKS
Trigger: GGATTTAAAATAGCAAAGCAACTTGTGGATCTGTGT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTGTCTTCTCTTCTCTTaGTCAGTTGACAGCCAGACT +
Preference number: 3 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSCLLFS*SVDSQT
Trigger: AGTCTGGCTGTCAACTGACAAAGAGAAGAGAAGACA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCAGACTGATCTGGGTTaGCATTCTGACTCCACACTT +
Preference number: 3 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMQTDLG*HSDSTL
Trigger: AAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCAGCCAGACTTGACCTaGGGCTCCTGGCCAGACTCC +
Preference number: 3 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMQPDLT*GSWPDS
Trigger: GGAGTCTGGCCAGGAGCCCAAGGTCAAGTCTGGCTG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTCTTCTCTTTGTCAGTaGACAGCCAGACTTGACCTT +
Preference number: 3 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSSLCQ*TARLDL
Trigger: AAGGTCAAGTCTGGCTGTCAACTGACAAAGAGAAGA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTGTCTTCTCTTCTCTTaGTCAGTTGACAGCCAGACT +
Preference number: 3 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMCLLFS*SVDSQT
Trigger: AGTCTGGCTGTCAACTGACAAAGAGAAGAGAAGACA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 72 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATaGGCACTTCTAGTTTTGAAGCCTTTATGGTCTCTT +
Preference number: 3 (lower is better)
Translates to: SLCGEQGMKHPS*ALLVLKPLWSL
Trigger: AAGAGACCATAAAGGCTTCAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 72 bp TGGTGTAGTGGACTTTGGGGCAGACTGATCTGGGTTTaGATTCTGACTCCACACTTCCTAACTCTGTCTTTA +
Preference number: 3 (lower is better)
Translates to: WCSGLWGRLIWV*ILTPHFLTLSL
Trigger: TAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCAAAGTCCACTACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp AGCTGTCAAAATCAATCAAACCCACTCGCAAGGAGCTaGAGAGGTGTGACTTTCAGCCACTCTGTTGTTTTG +
Preference number: 3 (lower is better)
Translates to: SCQNQSNPLARS*RGVTFSHSVVL
Trigger: CAAAACAACAGAGTGGCTGAAAGTCACACCTCTCCAGCTCCTTGCGAGTGGGTTTGATTGATTTTGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp TGTGTCTGCTGGAAATGGACGCCTCTCACTTTCCTCTaGCCACTCTTAACATCAGTCAGATCTTCTAATTGT +
Preference number: 3 (lower is better)
Translates to: CVCWKWTPLTFL*PLLTSVRSSNC
Trigger: ACAATTAGAAGATCTGACTGATGTTAAGAGTGGCCAGAGGAAAGTGAGAGGCGTCCATTTCCAGCAGACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAACACAGATCCACAAGTaGCTTTGCTATTTTAAATCC +
Preference number: 3 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTTQIHK*LCYFKS
Trigger: GGATTTAAAATAGCAAAGCAACTTGTGGATCTGTGT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTCTTCTCTTTGTCAGTaGACAGCCAGACTTGACCTT +
Preference number: 3 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSSLCQ*TARLDL
Trigger: AAGGTCAAGTCTGGCTGTCAACTGACAAAGAGAAGA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CCA 72 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTaGGTCCTATTTCAACTTCCCAAGAGAGAACATCTG +
Preference number: 3 (lower is better)
Translates to: FQEMGPGKSRIS*VLFQLPKREHL
Trigger: CAGATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTGCGCACTTCTAGTTTaGAAGCCTTTATGGTCTCTT +
Preference number: 3 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPCALLV*KPLWSL
Trigger: AAGAGACCATAAAGGCTTCAAAACTAGAAGTGCGCA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR GCA 72 bp TTGGTCCACATGGAAAGTAGAAGAGCAGCAATCCATTaGACTTGGATTTTTATCTTTTCAGGAGATGGGTCC +
Preference number: 3 (lower is better)
Translates to: LVHMESRRAAIH*TWIFIFSGDGS
Trigger: GGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTCTACTTTCCATGTGGACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR-3UTR CAA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATAGGTTCTTTACATCCTaGTTTCTCTCTGTTGCTTCC +
Preference number: 3 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNRFFTS*FLSVAS
Trigger: GGAAGCAACAGAGAGAAACAAGGATGTAAAGAACCT...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR TCA 72 bp TTTCTATTTGCTATTTCAATATGTGACATGAATCTCTaGGGCCAGCATGTCACACGTATACAGGGGCTTAAG +
Preference number: 3 (lower is better)
Translates to: FLFAISICDMNL*GQHVTRIQGLK
Trigger: CTTAAGCCCCTGTATACGTGTGACATGCTGGCCTCAGAGATTCATGTCACATATTGAAATAGCAAATAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR TCA 72 bp ACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATaGCAGAGCCTTAAAGCCTGGATTTCATTAGTGGAG +
Preference number: 3 (lower is better)
Translates to: TLITLWESHKSK*QSLKAWISLVE
Trigger: CTCCACTAATGAAATCCAGGCTTTAAGGCTCTGTCATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR TCA 72 bp TTGTGCATAATAACATTGAGGCTCAGAAGGGTGAAATaGCAGACAAAGTTACATAGCTTGCATGTGTCAGAG +
Preference number: 3 (lower is better)
Translates to: LCIITLRLRRVK*QTKLHSLHVSE
Trigger: CTCTGACACATGCAAGCTATGTAACTTTGTCTGTCATTTCACCCTTCTGAGCCTCAATGTTATTATGCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR GCA 72 bp TCTTTCACTACCTCTTTCACAGTCTTAGTGTGTTTCTaGAAGTGCACGCATGATGTAATAACACTGTATAGT +
Preference number: 3 (lower is better)
Translates to: SFTTSFTVLVCF*KCTHDVITLYS
Trigger: ACTATACAGTGTTATTACATCATGCGTGCACTTGCAGAAACACACTAAGACTGTGAAAGAGGTAGTGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAACACAGATCCACAAGTaGCTTTGCTATTTTAAATCC +
Preference number: 3 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPTQIHK*LCYFKS
Trigger: GGATTTAAAATAGCAAAGCAACTTGTGGATCTGTGT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGACTCTGTCTTTACCTTaGCAGGCTTCTGTTTTCTCA +
Preference number: 3 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMTLSLP*QASVFS
Trigger: TGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAGT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGGCAGGGCGAGGGCCTaGGTCCCAGCAGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSGRARA*VPAVAD
Trigger: GTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAGTGGGGGCTGGAGATaGTGCCACTCTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSGGWR*CHSGPA
Trigger: TGCGGGGCCAGAGTGGCATCATCTCCAGCCCCCACT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAGCTGGATACCCGGGTaGCAGCACCTGCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSWIPG*QHLPRH
Trigger: GTGTCGGGGCAGGTGCTGTCACCCGGGTATCCAGCT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGGACCTCCAGGCAGATaGGCGGCTTGCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSGPPGR*AACLSS
Trigger: GCTGGACAGGCAAGCCGCCCATCTGCCTGGAGGTCC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGGCGGCCAGGCCGGGTaGCTATACTGCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSGGQAG*LYCCAH
Trigger: GTGTGCACAGCAGTATAGCCACCCGGCCTGGCCGCC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGCCAGCGTGGCAGGTaGGCACGGCGTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESQRGR*ARRGPP
Trigger: TGGAGGGCCACGCCGTGCTCACCTGCCACGCTGGCT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGGGTGGCCAGTCAATTaGTACCCCGGGAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSGWPVN*YPGRHS
Trigger: CGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGGAGGCCTGGGGAGTTaGATCCTTGCCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSGGLGS*ILAPKL
Trigger: CAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGCGTCTCTGGCTGCCTaGAGTGGTGGGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSASLAA*SGGGHS
Trigger: ACTGTGTCCCCCACCACTGCAGGCAGCCAGAGACGC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACAGGTGAGCACGGCGTaGCCCTCCAGGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSQVSTA*PSRKKP
Trigger: TGGCTTCTTCCTGGAGGGCCACGCCGTGCTCACCTG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGCGGGCTCGGCAGACTaGCCTGTGGTCGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEAGSAD*PVVAPG
Trigger: GCCTGGAGCGACCACAGGCCAGTCTGCCGAGCCCGC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACGATGCGGTGGCCATTaGGGGGAATCGGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSRCGGH*GESGAL
Trigger: GAGAGCTCCCGATTCCCCCCAATGGCCACCGCATCG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACCAGGAATCAAGGCTTaGGTGAGCGGTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSPGIKA*VSGGSR
Trigger: CCGGGAGCCACCGCTCACCCAAGCCTTGATTCCTGG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAGCCCGAGAGGGAGCTaGGGAGCCGCGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSPRGS*GAASAG
Trigger: GCCAGCACTCGCGGCTCCTCAGCTCCCTCTCGGGCT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGCCCGAGAGGGAGCTaGGGAGCCGCGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAESPRGS*GAASAG
Trigger: GCCAGCACTCGCGGCTCCTCAGCTCCCTCTCGGGCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTCCCACGCTGGTTCCTaGGCAGTGAGGGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPSHAGS*AVREGA
Trigger: GGCTCCCTCCCTCACTGCTCAGGAACCAGCGTGGGA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGCTCCCGGGCAGTGTTaGTGGGTCTCCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPAPGQC*WVSHWA
Trigger: GGCCCAGTGGGAGACCCATCAACACTGCCCGGGAGC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGCAGGGCGAGGGCCTaGGTCCCAGCAGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGRARA*VPAVAD
Trigger: GTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCAGGGGTGCGGAGGGTaGTGCCCAGCAGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPQGCGG*CPAECW
Trigger: CCAGCACTCTGCTGGGCATCACCCTCCGCACCCCTG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATGTTCCAGACCACGCTaGCCTCCTTCAGGACGCAGG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSCSRPR*PPSGRR
Trigger: CCTGCGTCCTGAAGGAGGGCAGCGTGGTCTGGAACA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATCGCCCACGCCAAACTaGAAGCCCTTCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSPTPN*KPFRML
Trigger: CAGCATCCGGAAGGGCTTGCAGTTTGGCGTGGGCGA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGGTGCAGCCGGCCTCTaGTTCGATGGTCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSGAAGL*FDGPDA
Trigger: TGCATCTGGACCATCGAAGCAGAGGCCGGCTGCACC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACAGGCCCATCCCAGATaGGCAGCACGTCGTGAACCT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSQAHPR*AARREP
Trigger: AGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATGGGGTAATCCTTGCTaGCGCTGTGCAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSWGNPC*RCADGP
Trigger: CGGCCCATCTGCACAGCGGCAGCAAGGATTACCCCA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGCGGGCTCGGCAGACTaGCCTGTGGTCGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEAGSAD*PVVAPG
Trigger: GCCTGGAGCGACCACAGGCCAGTCTGCCGAGCCCGC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATCGTTGAAGGCCAGGTaGATGCGGCTCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSLKAR*MRLSGL
Trigger: CAGGCCTGAGAGCCGCATCCACCTGGCCTTCAACGA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAATGGAGCTGCCCAGCTaGAGGCTGTCCCCAAACCGT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSMELPS*RLSPNR
Trigger: ACGGTTTGGGGACAGCCTCCAGCTGGGCAGCTCCAT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACCTAGGATGAAGCCATaGAGTGGAGCCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSPRMKP*SGALGR
Trigger: CCTGCCCAGGGCTCCACTCCATGGCTTCATCCTAGG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATTGGGAGGCAGGTCCTaGTGGTGGAGCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSLGGRS*WWSPEA
Trigger: TGCTTCAGGGCTCCACCACCAGGACCTGCCTCCCAA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCTGGGGAACGGCTGCTaGAGGCGGGGCTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELGNGC*RRGSRW
Trigger: CCACCGAGAGCCCCGCCTCCAGCAGCCGTTCCCCAG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCTGGGGAACGGCTGCTaGAGGCGGGGCTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGLGNGC*RRGSRW
Trigger: CCACCGAGAGCCCCGCCTCCAGCAGCCGTTCCCCAG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACCTCTCCAGGGTAACTaGCATAGATGGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSPLQGN*HRWRQG
Trigger: GCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAATGGTGGCTGGCAGCTaGAAGCCTGTGAGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSMVAGS*KPVSLV
Trigger: TACGAGGCTCACAGGCTTTCAGCTGCCAGCCACCAT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACCCGATCAAGGGCGCTaGGTAAGTCCGCCCATCGCG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEPDQGR*VSPPIA
Trigger: CGCGATGGGCGGACTTACTCAGCGCCCTTGATCGGG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGCTGGATACCCGGGTaGCAGCACCTGCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSWIPG*QHLPRH
Trigger: GTGTCGGGGCAGGTGCTGTCACCCGGGTATCCAGCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATCGTTGAGGGCCGTGTaGAAGAAGGCGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSLRAV*KKANWP
Trigger: TGGCCAGTTCGCCTTCTTTCACACGGCCCTCAACGA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGCTCGGAGCCACCCTTaGGGGAGAAGCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEARSHP*GRSPPG
Trigger: GCCAGGAGGGCTTCTCCCTCAAGGGTGGCTCCGAGC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGAATCAAGGCTTGGGTaGGCGGTGGCTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPESRLG*AVAPGQ
Trigger: CTGCCCGGGAGCCACCGCTCACCCAAGCCTTGATTC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGGAAGCCAGTCACTCTaGGCATGGCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSGSQSL*AWLAAS
Trigger: AGAAGCAGCCAGCCATGCTCAGAGTGACTGGCTTCC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGGAGGCCTGGGGAGTTaGATCCTTGCCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPGGLGS*ILAPKL
Trigger: CAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCCGGAGAGAGGATGGTaGCGCTGGGCGAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPPERGW*RWAKSG
Trigger: ACCTGACTTCGCCCAGCGGCACCATCCTCTCTCCGG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCCCCGCAGGGAGCGATaGATGTTGGCGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEPRRER*MLAGWA
Trigger: AGCCCAGCCCGCCAACATGCATCGCTCCCTGCGGGG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACCACCGAGAAGTCACTaGCCAGCCTCTTGCCATAGC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSPPRSH*PASCHS
Trigger: GCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACAACTTGGATCTGGATaGCAGCGCCTTCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSQLGSG*QRLRGP
Trigger: TGGTCCCCGAAGGCGCTGGCATCCAGATCCAAGTTG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAGTGGCCTCAGCGCCTaGCTGGAGGTGGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPSGLSA*LEVVAF
Trigger: GAAGGCTACCACCTCCAGGCAGGCGCTGAGGCCACT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGAGTACGCTTGCCGATaGAGCTGTACCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSEYACR*SCTAPL
Trigger: CAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACATCCAGCCCACACATaGGGGTGCTGTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSHPAHT*GCCFPP
Trigger: TGGTGGGAAACAGCACCCGCATGTGTGGGCTGGATG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGCTGCCATCCGCCTTaGAGGTGCGGTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESCHPP*RCGARS
Trigger: GCTCCGAGCACCGCACCTGCAAGGCGGATGGCAGCT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGGGCACTGGGCACTGTaGTCAGGGGAGCCTACTTCC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPGHWAL*SGEPTS
Trigger: GGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCCGAAGCTGAACCTGTaGGGGCCGCTGGCGTGGACC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGPKLNL*GPLAWT
Trigger: GGTCCACGCCAGCGGCCCGCACAGGTTCAGCTTCGG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCGGCAGACTGGCCTGTaGTCGCTCCAGGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPRQTGL*SLQAAN
Trigger: GTTTGCGGCCTGGAGCGACCACAGGCCAGTCTGCCG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGACTCGGCGACACAGGTaGGCAGAGGCCGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGTRRHR*AEAGPR
Trigger: CCTGGGACCGGCCTCTGCCCACCTGTGTCGCCGAGT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGGGGGCTGTGCAGACTaGCCGGGGATTGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPGGCAD*PGIVPH
Trigger: GTGTGGAACAATCCCCGGCCAGTCTGCACAGCCCCC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCAGGAGATGTGGGCGTaGCCCTGGAGGGCATATCCC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPQEMWA*PWRAYP
Trigger: GGGATATGCCCTCCAGGGCCACGCCCACATCTCCTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCACTTGGGCAGGGGGTaGTCCCAGTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHLGRG*SQFRLV
Trigger: CACCAACCGGAACTGGGACCACCCCCTGCCCAAGTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAGCCAGACACAGTCCTaGGAGCTGGAGTACGGGCTA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSQTQS*ELEYGL
Trigger: TAGCCCGTACTCCAGCTCCCAGGACTGTGTCTGGCT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCATGGAGTGGAGCCCTaGGCAGGCTGCAGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHGVEP*AGCSKG
Trigger: CCCCTTACTGCAGCCTGCCCAGGGCTCCACTCCATG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCATGCGTTGGCGTCTCTaGCTGCCTGCAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPMRWRL*LPAVVG
Trigger: CCCCACCACTGCAGGCAGCCAGAGACGCCAACGCAT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACCAGGGCCCCGACGTTaGCATGCGTTGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEPGPRR*HALASL
Trigger: CAGAGACGCCAACGCATGCCAACGTCGGGGCCCTGG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 72 bp CAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTaGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: QHQPWEAWGVES*PRSCLRGDSRT
Trigger: GGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 72 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTaGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGE*NPCPEAAYAET
Trigger: TGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACGGGGGCGATGCTTATaGGCCTCATTCACAATAGCC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSRGRCL*ASFTIA
Trigger: GGCTATTGTGAATGAGGCTCATAAGCATCGCCCCCG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCTCTTCCGCGGTaGTGGTCCACGTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEAALPR*WSTCSW
Trigger: CCAACTGCACGTGGACCATCACCGCGGAAGAGCAGC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCCACGTCAATGTCGTTaGAGGCCAGGTGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPPRQCR*RPGGCG
Trigger: GCCGCATCCACCTGGCCTTCAACGACATTGACGTGG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGCCCGAGTCACAGCTaGAGGTCACCAGCGCGCCCA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSPSHS*RSPARP
Trigger: TGGGCGCGCTGGTGACCTTCAGCTGTGACTCGGGCT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGCTGGATACCCGGGTaGCAGCACCTGCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSWIPG*QHLPRH
Trigger: GTGTCGGGGCAGGTGCTGTCACCCGGGTATCCAGCT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTGCCCCTGCGCTCTGTaGGGTTGCCTCCACACGGCA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGCPCAL*GCLHTA
Trigger: TGCCGTGTGGAGGCAACCTCACAGAGCGCAGGGGCA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGCCATGCTCCGGGTaGAGACGCCGAGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGWPCSG*RRRAVV
Trigger: CACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTGGTCTGGCCTAGGATaGAGCCATGGAGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPWSGLG*SHGVEP
Trigger: GGGCTCCACTCCATGGCTTCATCCTAGGCCAGACCA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTTGACAGGTGCGCTCTaGCGATCCCCGGAGCACGTG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLTGAL*RSPEHV
Trigger: CACGTGCTCCGGGGATCGTCAGAGCGCACCTGTCAA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCGAGCAGTGACGGCTaGGCAGGCCTGTGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCPSSDG*AGLWRS
Trigger: ACTACGCCACAGGCCTGCTCAGCCGTCACTGCTCGG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCCGAGCAGTGACGGCTaGGCAGGCCTGTGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGPSSDG*AGLWRS
Trigger: ACTACGCCACAGGCCTGCTCAGCCGTCACTGCTCGG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCATTTCCCTCACAGGTaGACACCGCGGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHFPHR*TPRAGR
Trigger: TCTCCCTGCCCGCGGTGTTCACCTGTGAGGGAAATG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGCTCGGAGCCACCCTTaGGGGAGAAGCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRARSHP*GRSPPG
Trigger: GCCAGGAGGGCTTCTCCCTCAAGGGTGGCTCCGAGC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGCTCCCGGGCAGTGTTaGTGGGTCTCCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRAPGQC*WVSHWA
Trigger: GGCCCAGTGGGAGACCCATCAACACTGCCCGGGAGC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCCGCCTCGCTGGCCATaGTGTCTGTGGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPPPRWP*CLWAGC
Trigger: ACATCCAGCCCACAGACATCATGGCCAGCGAGGCGG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGAGTGCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATGCCCCTGCCTCTCAGTaGAGACCCTGGCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RVQLLLQPARFPGTGPLDAPASQ*RPWRGL
Trigger: GAGGCCACGCCAGGGTCTTCACTGAGAGGCAGGGGC...ATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACCAGGGAACTGCCACTaGCATCAGTCTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSPGNCH*HQSGRG
Trigger: TCCTCTTCCAGACTGATGGCAGTGGCAGTTCCCTGG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGTTTCCTGAGAAGGTaGCCAGGACGGGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGFLRR*PGRAPR
Trigger: CCGAGGCGCCCGTCCTGGGCACCTTCTCAGGAAACC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGTTGGCGGGCTGGGCTaGCAGAAGAACCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPVGGLG*QKNLFS
Trigger: CGAGAACAGGTTCTTCTGGCAGCCCAGCCCGCCAAC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACAGCTCCCCTCACAATaGCATTGGCAAAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSQLPSQ*HWQRAL
Trigger: CAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAGCCCTGGGCAGGCTaGAGTAAGGGGCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPEPWAG*SKGLNS
Trigger: GCTATTCAGCCCCTTACTGCAGCCTGCCCAGGGCTC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGTGGCCTCAGCGCCTaGCTGGAGGTGGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESGLSA*LEVVAF
Trigger: GAAGGCTACCACCTCCAGGCAGGCGCTGAGGCCACT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGCCCCGACGTTGGCATaGGTTGGCGTCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCAPTLA*VGVSGC
Trigger: GCAGCCAGAGACGCCAACGCATGCCAACGTCGGGGC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGCCTTGCAGGTGCGGTaGTCGGAGCCACCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCALQVR*SEPPLR
Trigger: CCTCAAGGGTGGCTCCGAGCACCGCACCTGCAAGGC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAGCTGCCATCCGCCTTaGAGGTGCGGTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSCHPP*RCGARS
Trigger: GCTCCGAGCACCGCACCTGCAAGGCGGATGGCAGCT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGGCACTGGGCACTGTaGTCAGGGGAGCCTACTTCC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGHWAL*SGEPTS
Trigger: GGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCAAGGACCCTGCTGCTaGCCCCAGACTTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPQGPCC*PQTWHP
Trigger: AGGATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGGGGAGTTGAATCCTTaGCCCGAAGCTGCCTACGCG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPGELNP*PEAAYA
Trigger: CGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAACCTGCCAGGTCTTTTaGTGGCTATGGTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSTCQVF*WLWSAA
Trigger: AGCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCCTGCTGGATGCCATTaGGCAGCCTCCCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPPAGCH*AASLGS
Trigger: GGAACCCAGGGAGGCTGCCCAATGGCATCCAGCAGG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGCGGGCTCGGCAGACTaGCCTGTGGTCGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCAGSAD*PVVAPG
Trigger: GCCTGGAGCGACCACAGGCCAGTCTGCCGAGCCCGC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGGGGCTGTGCAGACTaGCCGGGGATTGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGGCAD*PGIVPH
Trigger: GTGTGGAACAATCCCCGGCCAGTCTGCACAGCCCCC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAGTTCTGGGGGTAGTTaGGGGACAAGACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSSGGS*GTRPLR
Trigger: ACGGAGTGGTCTTGTCCCCCAACTACCCCCAGAACT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACACTTGGGCAGGGGGTaGTCCCAGTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEHLGRG*SQFRLV
Trigger: CACCAACCGGAACTGGGACCACCCCCTGCCCAAGTG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCACTCCAGAGCCCATTaGCCATGCACTCACGCACCC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHSRAH*PCTHAP
Trigger: GGGTGCGTGAGTGCATGGCCAATGGGCTCTGGAGTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGATCCCCGGAGCACGTaGCCAGCTTCACAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPDPRST*PASQLK
Trigger: CTTCAGCTGTGAAGCTGGCCACGTGCTCCGGGGATC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAGCACCAGAGGGGGATaGCAGGAGAAGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSTRGG*QEKETD
Trigger: ATCTGTCTCCTTCTCCTGCCATCCCCCTCTGGTGCT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGGGGACACAGTCAGGTaGGGTTCCACTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPGDTVR*GSTPGQ
Trigger: CTGACCTGGAGTGGAACCCCACCTGACTGTGTCCCC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGCGGGGAGCCCGGATaGCCACAGGACACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGGEPG*PQDTKR
Trigger: TCTCTTGGTGTCCTGTGGCCATCCGGGCTCCCCGCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGCAGTTCTGGCCAGCTaGTCTTGGGTGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPAVLAS*SWVVAL
Trigger: CAAAGCCACCACCCAAGATCAGCTGGCCAGAACTGC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTTCTGGTCCCCATCCTaGCCACCATCACCGACCGTC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPFWSPS*PPSPTV
Trigger: GACGGTCGGTGATGGTGGTCAGGATGGGGACCAGAA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACTGGGCGAAGTCAGGTaGCCACCACAGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPELGEVR*PPQGAS
Trigger: TGAAGCTCCCTGTGGTGGTCACCTGACTTCGCCCAG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAGCCCGAGTCACAGCTaGAGGTCACCAGCGCGCCCA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSPSHS*RSPARP
Trigger: TGGGCGCGCTGGTGACCTTCAGCTGTGACTCGGGCT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGCGGACCTGGGCAGTaGAGTTGCCATAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESGPGQ*SCHRAQ
Trigger: CTGGGCTCTATGGCAACTTCACTGCCCAGGTCCGCT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGGCTGTGGCCGTCGTaGACCTCCACCACGTCGTTG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCWLWPS*TSTTSL
Trigger: CAACGACGTGGTGGAGGTTCACGACGGCCACAGCCA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGGTGGCCAAGGGCAGTaGTTCTCCTGTATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEGGQGQ*FSCMGA
Trigger: GGCTCCCATACAGGAGAATCACTGCCCTTGGCCACC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCACACACGTGGGCGCTaGGACATTCCATTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHTRGR*DIPLGQ
Trigger: TTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGGTGGCCAGTCAATTaGTACCCCGGGAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGWPVN*YPGRHS
Trigger: CGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGAGGAGGGCATTTGGTaGGTGGATAAGCGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSEEGIW*VDKRRK
Trigger: CTTTCTCCGCTTATCCACTCACCAAATGCCCTCCTC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGTAGGCGTGATCAGATaGCCAACGCAGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSVGVIR*PTQVHR
Trigger: TCTGTGTACCTGCGTTGGTCATCTGATCACGCCTAC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCACGAGCCATTGGCTTaGCAGGTGCGCTCTGACGAT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHEPLA*QVRSDD
Trigger: ATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACCTGGCAGGAGTAGATaGGCGTGTAGCCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEPGRSR*ACSPWR
Trigger: CCTCCATGGGCTACACGCTCATCTACTCCTGCCAGG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGCTCCCGGGCAGTGTTaGTGGGTCTCCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCAPGQC*WVSHWA
Trigger: GGCCCAGTGGGAGACCCATCAACACTGCCCGGGAGC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCGCCTCGCTGGCCATaGTGTCTGTGGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCPPRWP*CLWAGC
Trigger: ACATCCAGCCCACAGACATCATGGCCAGCGAGGCGG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGAGGCCTGGGGAGTTaGATCCTTGCCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGGLGS*ILAPKL
Trigger: CAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGCCACTCTGTTGTTTTaGTTCAGGACCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSATLLF*FRTCQV
Trigger: GACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGCGTAGATGGTGGGTaGAGGGCCTCATCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGVDGG*RASSAL
Trigger: CAGGGCAGATGAGGCCCTTCACCCACCATCTACGCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATGTTCCAGACCACGCTaGCCTCCTTCAGGACGCAGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPECSRPR*PPSGRR
Trigger: CCTGCGTCCTGAAGGAGGGCAGCGTGGTCTGGAACA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCGCCCACGCCAAACTaGAAGCCCTTCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSPTPN*KPFRML
Trigger: CAGCATCCGGAAGGGCTTGCAGTTTGGCGTGGGCGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCCCCGCAGGGAGCGATaGATGTTGGCGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCPRRER*MLAGWA
Trigger: AGCCCAGCCCGCCAACATGCATCGCTCCCTGCGGGG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGCTCAGGGTCGAGGTaGCCTCAACTTCGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSSGSR*PQLRSP
Trigger: GGGGCTACGAAGTTGAGGGCACCTCGACCCTGAGCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCACTGCCCAGCCTCTTaGCATAGCGGGGTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCHCPAS*HSGVPA
Trigger: TGCCGGAACCCCGCTATGGCAAGAGGCTGGGCAGTG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGCACTGTTCCGGGCATaGAGGAGATGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEALFRA*RRCGRG
Trigger: GCCACGCCCACATCTCCTGCATGCCCGGAACAGTGC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGGCGGTAGCCGGCGTTaGAGCCAAAGTGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEGGSRR*SQSGWS
Trigger: GCTCCATCCACTTTGGCTGCAACGCCGGCTACCGCC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACCCCGAGGCTCCATTTaGCATTGGCCTGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEPRGSI*HWPDSG
Trigger: TCCGCTGTCAGGCCAATGGCAAATGGAGCCTCGGGG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGCGTCTCTGGCTGCCTaGAGTGGTGGGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGASLAA*SGGGHS
Trigger: ACTGTGTCCCCCACCACTGCAGGCAGCCAGAGACGC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGCTGCCATCCGCCTTaGAGGTGCGGTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSCHPP*RCGARS
Trigger: GCTCCGAGCACCGCACCTGCAAGGCGGATGGCAGCT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGCAGATGGGCGGCTTaGCTGTCCAGCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGRWAA*LSSCHP
Trigger: CGGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACAAGGACCCTGCTGCTaGCCCCAGACTTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEQGPCC*PQTWHP
Trigger: AGGATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGCTATGGTCAGCGGCTaGTGGGAGCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGAMVSG*WEPRSQ
Trigger: CTGGCTCCTTGGCTCCCAGCAGCCGCTGACCATAGC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATGCCCCACCAGCAGGTaGTCCTCGAGCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPECPTSR*SSSISW
Trigger: CCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATCTCAACTGTCCCATTaGGACCGTGCAGTTGGAACG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSQLSH*DRAVGT
Trigger: CGTTCCAACTGCACGGTCCCAATGGGACAGTTGAGA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCAGGTGAGCACGGCGTaGCCCTCCAGGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCQVSTA*PSRKKP
Trigger: TGGCTTCTTCCTGGAGGGCCACGCCGTGCTCACCTG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTTCTCAGAGCCAGCGTaGCAGGTGAGCACGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCFSEPA*QVSTAW
Trigger: CCACGCCGTGCTCACCTGCCACGCTGGCTCTGAGAA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCCAGCTCAGCCAGGATaGTCCATGTGCAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPPAQPG*SMCSRH
Trigger: ATGCCGACTGCACATGGACCATCCTGGCTGAGCTGG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGAGGATGGTGCCGCTaGGCGAAGTCAGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPERGWCR*AKSGDH
Trigger: GTGGTCACCTGACTTCGCCCAGCGGCACCATCCTCT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAGGGCCCGGCTCCACTaGAAGTTGGGCTCACACTCC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGRARLH*KLGSHS
Trigger: GGAGTGTGAGCCCAACTTCCAGTGGAGCCGGGCCCT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGCTGCCTCAGGGGCTaGGTGAAGCTGCCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSCLRG*VKLPFS
Trigger: TGAGAACGGCAGCTTCACCCAGCCCCTGAGGCAGCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCACACTGGAACACTGTaGAGTCGCCGGCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHTGTL*SRRLPN
Trigger: GTTGGGAAGCCGGCGACTCCACAGTGTTCCAGTGTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGGAGCGATGCATGTTaGCGGGCTGGGCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGSDAC*RAGLPE
Trigger: TTCTGGCAGCCCAGCCCGCCAACATGCATCGCTCCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCAAAGTGGAAGCCTCTaGCTGGTGCGAGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPQSGSL*LVRGLW
Trigger: CCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCATTCGAAGCGGACGATaGCCCCCACCGAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPIRSGR*PPPRSH
Trigger: GTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAAT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGTTGAGGTACGGCTCTaGGAAGCCAGGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPVEVRL*EARGQD
Trigger: ATCCTGTCCCCTGGCTTCCCAGAGCCGTACCTCAAC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACGGCATGCAGGAGATGTaGGCGTGGCCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHGMQEM*AWPWRA
Trigger: TGCCCTCCAGGGCCACGCCCACATCTCCTGCATGCC...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGCATGCAGGAGATGTaGGCGTGGCCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGMQEM*AWPWRA
Trigger: TGCCCTCCAGGGCCACGCCCACATCTCCTGCATGCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGGCATGCAGGAGATGTaGGCGTGGCCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRGMQEM*AWPWRA
Trigger: TGCCCTCCAGGGCCACGCCCACATCTCCTGCATGCC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAGCAGTCCATGTTACTaGGGTAGTTGCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSSPCY*GSCLGS
Trigger: GCTTCCCAGGCAACTACCCCAGTAACATGGACTGCT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATGTGGAAATACACGGTaGTCTCGTGGGACGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSCGNTR*SRGTWR
Trigger: TCTCCACGTCCCACGAGACCACCGTGTATTTCCACA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAATCCTGGCCGATTCTaGGAGTGGTCGCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSNPGRF*EWSLWK
Trigger: TTTCCACAGCGACCACTCCCAGAATCGGCCAGGATT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTGCAGCCAAAGTGGATaGAGCCCCCGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRCSQSG*SPRAGC
Trigger: GCACCCAGCCCGGGGGCTCCATCCACTTTGGCTGCA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCGATGCGGTGGCCATTaGGGGGAATCGGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAERCGGH*GESGAL
Trigger: GAGAGCTCCCGATTCCCCCCAATGGCCACCGCATCG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGCGGGGAGCCCGGATaGCCACAGGACACCAGCACA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGGEPG*PQDTST
Trigger: TGTGCTGGTGTCCTGTGGCCATCCGGGCTCCCCGCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGATCCCCGGAGCACGTaGCCAGCTTCACAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPDPRST*PASQLK
Trigger: CTTCAGCTGTGAAGCTGGCCACGTGCTCCGGGGATC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCGGGCAGGGAGAGCTaGTACCCCTCCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGAGRES*YPSRQA
Trigger: TGCCTGCCTGGAGGGGTACCAGCTCTCCCTGCCCGC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACATGTCCCATCTGACTaGCAAAACCTGCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSHVPSD*QNLRGE
Trigger: CTCTCCACGCAGGTTTTGCCAGTCAGATGGGACATG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGCAGGTCCTGGTGGTaGAGCCCTGAAGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGRSWW*SPEAGS
Trigger: GCTACCTGCTTCAGGGCTCCACCACCAGGACCTGCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGGGACACAGTCAGGTaGGGTTCCACTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGDTVR*GSTPGQ
Trigger: CTGACCTGGAGTGGAACCCCACCTGACTGTGTCCCC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCAGGGCCCCGACGTTaGCATGCGTTGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPGPRR*HALASL
Trigger: CAGAGACGCCAACGCATGCCAACGTCGGGGCCCTGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGACCTCCAGGCAGATaGGCGGCTTGCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGPPGR*AACLSS
Trigger: GCTGGACAGGCAAGCCGCCCATCTGCCTGGAGGTCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCTGTTGGAAGCAAAGTaGCGGCCAATGGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPLLEAK*RPMDSG
Trigger: CCCCGAGTCCATTGGCCGCCACTTTGCTTCCAACAG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCTACTTCCTGCCCCCTaGGGAACGGCTGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGLLPAP*GTAAGG
Trigger: GCCTCCAGCAGCCGTTCCCCAGGGGGCAGGAAGTAG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCTACTTCCTGCCCCCTaGGGAACGGCTGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRLLPAP*GTAAGG
Trigger: GCCTCCAGCAGCCGTTCCCCAGGGGGCAGGAAGTAG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTGCCCAGCAGAGTGCTaGGTGCCCCACCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRCPAEC*VPHQQV
Trigger: CACCTGCTGGTGGGGCACCCAGCACTCTGCTGGGCA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGCCCAGCAGAGTGCTaGGTGCCCCACCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGCPAEC*VPHQQV
Trigger: CACCTGCTGGTGGGGCACCCAGCACTCTGCTGGGCA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGGTATATGGCGTAGATaGTGGGTGAAGGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSGIWRR*WVKGLI
Trigger: GATGAGGCCCTTCACCCACCATCTACGCCATATACC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAGCCAGCGTGGCAGGTaGGCACGGCGTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASQRGR*ARRGPP
Trigger: TGGAGGGCCACGCCGTGCTCACCTGCCACGCTGGCT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCAGTGGGGGCTGGAGATaGTGCCACTCTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSGGWR*CHSGPA
Trigger: TGCGGGGCCAGAGTGGCATCATCTCCAGCCCCCACT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCTTGGTATTGGGCACTaGATCCGCGCTGCCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCLGIGH*IRAAGG
Trigger: ACCACCGGCAGCGCGGATTCAGTGCCCAATACCAAG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTTCTGGTCCCCATCCTaGCCACCATCACCGACCGTC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEFWSPS*PPSPTV
Trigger: GACGGTCGGTGATGGTGGTCAGGATGGGGACCAGAA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGCAGGTGATGGTCTCTaGGCCCTGAGTCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEAGDGL*ALSPKE
Trigger: TTCCTTGGGACTCAGGGCTCAGAGACCATCACCTGC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAGCCCGAGTCACAGCTaGAGGTCACCAGCGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSPSHS*RSPARP
Trigger: TGGGCGCGCTGGTGACCTTCAGCTGTGACTCGGGCT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCCTCCACCACGTCGTTaGGGGCCGTGTGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEPPPRR*GPCERR
Trigger: CCTTCTTTCACACGGCCCTCAACGACGTGGTGGAGG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGTGGCCAAGGGCAGTaGTTCTCCTGTATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGGQGQ*FSCMGA
Trigger: GGCTCCCATACAGGAGAATCACTGCCCTTGGCCACC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTGCCCCTGCGCTCTGTaGGGTTGCCTCCACACGGCA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKECPCAL*GCLHTA
Trigger: TGCCGTGTGGAGGCAACCTCACAGAGCGCAGGGGCA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGCCAATGGGCACGGTaGTCAGCCAGACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGQWAR*SARHSP
Trigger: AGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGACAATCAGGGGAGCTaGGTAATTCCCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPDNQGS*VIPTEG
Trigger: GCCCTCAGTGGGAATTACTCAGCTCCCCTGATTGTC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGCCAGGGTCACAGATaGGCATCAGCTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSQGHR*ASAGPG
Trigger: TCCAGGCCCAGCTGATGCTCATCTGTGACCCTGGCT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGCCAGCTTCACAGCTaGAGCGCATCACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGQLHS*SASQCL
Trigger: CAGGCACTGTGATGCGCTTCAGCTGTGAAGCTGGCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACACGAGCCATTGGCTTaGCAGGTGCGCTCTGACGAT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEHEPLA*QVRSDD
Trigger: ATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCTGGCAGGAGTAGATaGGCGTGTAGCCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCPGRSR*ACSPWR
Trigger: CCTCCATGGGCTACACGCTCATCTACTCCTGCCAGG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGAATCAAGGCTTGGGTaGGCGGTGGCTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEESRLG*AVAPGQ
Trigger: CTGCCCGGGAGCCACCGCTCACCCAAGCCTTGATTC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCTGACTCCAGCAGCCTaGGGTCCAGTCTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPLTPAA*GPVFES
Trigger: GCTTTCAAAGACTGGACCTCAGGCTGCTGGAGTCAG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCCGCCTCGCTGGCCATaGTGTCTGTGGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGPPRWP*CLWAGC
Trigger: ACATCCAGCCCACAGACATCATGGCCAGCGAGGCGG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATGTGACATGAATCTCTaGGGCCAGCATGTCACACGT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSCDMNL*GQHVTR
Trigger: ACGTGTGACATGCTGGCCTCAGAGATTCATGTCACA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGCGTAGATGGTGGGTaGAGGGCCTCATCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGVDGG*RASSAL
Trigger: CAGGGCAGATGAGGCCCTTCACCCACCATCTACGCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTTGAACCCTGCTGGATaGCATTGGGCAGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLNPAG*HWAASL
Trigger: CAGGGAGGCTGCCCAATGGCATCCAGCAGGGTTCAA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGCCATATGCAGGTATaGCAGGGTCACCGCAACTGC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGHMQV*QGHRNC
Trigger: GCAGTTGCGGTGACCCTGGCATACCTGCATATGGCC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACTTTTGGCATGTGATTaGCTTCTGTCCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSLLACD*LLSHQL
Trigger: GAGCTGGTGGGACAGAAGGCAATCACATGCCAAAAG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGAAGGAGATGGAGCTaGCCAGCTGGAGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGRRWS*PAGGCP
Trigger: GGGACAGCCTCCAGCTGGGCAGCTCCATCTCCTTCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTCGCCCACGCCAAACTaGAAGCCCTTCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSPTPN*KPFRML
Trigger: CAGCATCCGGAAGGGCTTGCAGTTTGGCGTGGGCGA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGGTGCAGCCGGCCTCTaGTTCGATGGTCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEGAAGL*FDGPDA
Trigger: TGCATCTGGACCATCGAAGCAGAGGCCGGCTGCACC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCAGGCCCATCCCAGATaGGCAGCACGTCGTGAACCT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEQAHPR*AARREP
Trigger: AGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAAGTCAGTGCTGAACTaGAGGACGACCGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSKSVLN*RTTELK
Trigger: CTTCAACTCGGTCGTCCTGCAGTTCAGCACTGACTT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCACAGATGCATCGCTaGGGAAGGCGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSQMHR*GRRGRG
Trigger: GCCTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAGAGCTGGTTGGAGGTaGTGTTCAGAAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPRAGWR*CSEGQA
Trigger: TGCCTGCCCTTCTGAACAGCACCTCCAACCAGCTCT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCAGAGGGCTCTGTCTaGAGCAGGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCPEGSV*SRLRLR
Trigger: CCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCTGG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGAGCCCTGGGCAGGCTaGAGTAAGGGGCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGEPWAG*SKGLNS
Trigger: GCTATTCAGCCCCTTACTGCAGCCTGCCCAGGGCTC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGTGGCCTCAGCGCCTaGCTGGAGGTGGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSGLSA*LEVVAF
Trigger: GAAGGCTACCACCTCCAGGCAGGCGCTGAGGCCACT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGTGTCCAGACACTCTaGAGTGGCCTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCCVQTL*SGLSAC
Trigger: GCAGGCGCTGAGGCCACTGCAGAGTGTCTGGACACA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGTGGGACATTGCGGTTaGTCCATAGGCCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPVGHCG*SIGLCP
Trigger: TGGACACAGGCCTATGGAGCAACCGCAATGTCCCAC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGATGCGCACAGACATaGCGATCAGGCGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPRCAQT*RSGGSQ
Trigger: CTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACATCCAGCCCACACATaGGGGTGCTGTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEHPAHT*GCCFPP
Trigger: TGGTGGGAAACAGCACCCGCATGTGTGGGCTGGATG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGACTCCACACTCAGGCTaGGAGCCGCTCCACGAGCCA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRTPHSG*EPLHEP
Trigger: TGGCTCGTGGAGCGGCTCGCAGCCTGAGTGTGGAGT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGCAGCTGGGCTGGGTaGCACTCCATGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCCSWAG*HSMSHL
Trigger: CAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTCAGGGTCGGATCTATaGAGCTGGGCTGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSGSDL*SWAGCH
Trigger: GTGGCACCCAGCCCAGCTGCATAGATCCGACCCTGA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGCCCCGACGTTGGCATaGGTTGGCGTCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEAPTLA*VGVSGC
Trigger: GCAGCCAGAGACGCCAACGCATGCCAACGTCGGGGC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCATCCGCCTTGCAGGTaGGGTGCTCGGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEHPPCR*GARSHP
Trigger: AGGGTGGCTCCGAGCACCGCACCTGCAAGGCGGATG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCATCCGCCTTGCAGGTaGGGTGCTCGGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCHPPCR*GARSHP
Trigger: AGGGTGGCTCCGAGCACCGCACCTGCAAGGCGGATG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGCTTGCCTGTCCAGCTaGCATCCGCCTTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGACLSS*HPPCRC
Trigger: GCACCTGCAAGGCGGATGGCAGCTGGACAGGCAAGC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGCCGGGTGGCTATACTaGTGTGCACACTGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEAGWLY*CAHCAD
Trigger: GTCAGCACAGTGTGCACAGCAGTATAGCCACCCGGC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCCTTGCTGCCGCTGTaGAGATGGGCCGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSLLPL*RWAVHQ
Trigger: CTGATGAACGGCCCATCTGCACAGCGGCAGCAAGGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCCTTGGGGTAATCCTTaGTGCCGCTGTGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPPWGNP*CRCADG
Trigger: CCCATCTGCACAGCGGCAGCAAGGATTACCCCAAGG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGCTATGGTCAGCGGCTaGTGGGAGCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGAMVSG*WEPRSQ
Trigger: CTGGCTCCTTGGCTCCCAGCAGCCGCTGACCATAGC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTGCCCCACCAGCAGGTaGTCCTCGAGCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGCPTSR*SSSISW
Trigger: CCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGGAGAACACGCAGCCTaGCTTCTTAGCCGACCATTG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPGEHAA*LLSRPL
Trigger: CAATGGTCGGCTAAGAAGCCAGGCTGCGTGTTCTCC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTCGAGACGGGCCACGTaGCCACTGCTTGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSRRAT*PLLVME
Trigger: CTCCATCACAAGCAGTGGCCACGTGGCCCGTCTCGA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCCGTTTGCCATTTACTaGAACGCCAGGATCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPPFAIY*NARIRA
Trigger: TGCCCGGATCCTGGCGTTCCAGTAAATGGCAAACGG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCATGGAGCTGCCCAGCTaGAGGCTGTCCCCAAACCGT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCMELPS*RLSPNR
Trigger: ACGGTTTGGGGACAGCCTCCAGCTGGGCAGCTCCAT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGATGGAGCTGCCCAGCTaGAGGCTGTCCCCAAACCGT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGMELPS*RLSPNR
Trigger: ACGGTTTGGGGACAGCCTCCAGCTGGGCAGCTCCAT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGAGGATGGTGCCGCTaGGCGAAGTCAGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAERGWCR*AKSGDH
Trigger: GTGGTCACCTGACTTCGCCCAGCGGCACCATCCTCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTTTGATGGGGTAGCCTaGCTGGGCCTCAATCACCCA +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPFDGVA*LGLNHP
Trigger: TGGGTGATTGAGGCCCAGCCAGGCTACCCCATCAAA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCCGGATGCTGTAGGCTaGGACCTCGGGCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGPDAVG*DLGLLT
Trigger: TGTGAGGAGCCCGAGGTCCCAGCCTACAGCATCCGG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGAAGTGTAGCCCAATaGTGCAGCCGGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGSVAQ*CSRPLL
Trigger: AAGCAGAGGCCGGCTGCACCATTGGGCTACACTTCC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGTCACACTCCTTGCCTaGCGGGTAGGGTTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPVTLLA*RVGFWV
Trigger: TACCCAGAACCCTACCCGCCAGGCAAGGAGTGTGAC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGTGGAAGCCTCTGGCTaGTGCGAGGCCTTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRVEASG*CEAFGA
Trigger: AGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTCCAC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCAAAGTGGAAGCCTCTaGCTGGTGCGAGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPQSGSL*LVRGLW
Trigger: CCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGAGGCACTCGATCTCTaGCGACCCCTGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCEALDL*RPLQGI
Trigger: TATGCCCTGCAGGGGTCGCCAGAGATCGAGTGCCTC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACTGACAACTTGGATCTaGATGCCAGCGCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPELTTWI*MPAPSG
Trigger: CCCCGAAGGCGCTGGCATCCAGATCCAAGTTGTCAG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTTGAGGCGGACGCCATaGCCAATGGGCACGGTGATC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGLRRTP*PMGTVI
Trigger: GATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTTGAGGCGGACGCCATaGCCAATGGGCACGGTGATC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELRRTP*PMGTVI
Trigger: GATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATCAGGATCACGCCTGTaGAGTCTGTCAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSGSRL*SLSEAH
Trigger: ATGAGCTTCTGACAGACTCCACAGGCGTGATCCTGA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGTGCCGGGTACAGATaGCCATGCTGTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGAGYR*PCCVPP
Trigger: TGGTGGGACACAGCATGGCCATCTGTACCCGGCACC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGATCCCCGGAGCACGTaGCCAGCTTCACAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGDPRST*PASQLK
Trigger: CTTCAGCTGTGAAGCTGGCCACGTGCTCCGGGGATC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCTGGCAAAACCTGCGTaGAGAGCCCACCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGLAKPA*RAHQHQ
Trigger: CTGGTGCTGGTGGGCTCTCCACGCAGGTTTTGCCAG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGGAGGCAGGTCCTGGTaGTGGAGCCCTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRGGRSW*WSPEAG
Trigger: ACCTGCTTCAGGGCTCCACCACCAGGACCTGCCTCC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTTGGGAGGCAGGTCCTaGTGGTGGAGCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGLGGRS*WWSPEA
Trigger: TGCTTCAGGGCTCCACCACCAGGACCTGCCTCCCAA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGCTTGGGTGAGCGGTaGCTCCCGGGCAGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGLGER*LPGSVD
Trigger: ATCAACACTGCCCGGGAGCCACCGCTCACCCAAGCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAGCTCCACGCCACTGTaGTCGATCATGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPSSTPL*SIMVAL
Trigger: CAATGCCACCATGATCGACCACAGTGGCGTGGAGCT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACTGTTGGAAGCAAAGTaGCGGCCAATGGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPELLEAK*RPMDSG
Trigger: CCCCGAGTCCATTGGCCGCCACTTTGCTTCCAACAG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGCGGCCAGGCCGGGTaGCTATACTGCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCGGQAG*LYCCAH
Trigger: GTGTGCACAGCAGTATAGCCACCCGGCCTGGCCGCC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGGTAACTGGCATAGATaGCGGCAGGGCGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRGNWHR*RQGEGL
Trigger: CAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACACAGGTGTCTTGCCTaGCTTTCCAGACCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEHRCLA*LSRPGH
Trigger: GTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTGTG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCAACCGTGGGAGGCCTaGGGAGTTGAATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCQPWEA*GVESLP
Trigger: GGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATGTGTCTGCTGGAAATaGACGCCTCTCACTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSCVCWK*TPLTFL
Trigger: GAGGAAAGTGAGAGGCGTCCATTTCCAGCAGACACA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGATGGTGGCTGGCAGCTaGAAGCCTGTGAGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGMVAGS*KPVSLV
Trigger: TACGAGGCTCACAGGCTTTCAGCTGCCAGCCACCAT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGTTGCCATCCGATGTaGAGTGCAGTCGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGCHPM*SAVAAS
Trigger: ACTGGCTGCGACTGCACTTCACATCGGATGGCAACC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGCCCTCGTTGCAGGTaGACTGGACGCTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAESPRCR*TGRWIL
Trigger: TAGGATCCAGCGTCCAGTTCACCTGCAACGAGGGCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCCTTCCACCCTGCTGGATTAGATGGTGTCAGGGGTGGCAATGACGGTGAGCAGAGTGTGTCACCGTGGTaGAACCGGGAGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PFHPAGLDGVRGGNDGEQSVSPW*NREPSL
Trigger: GAGGGAAGGCTCCCGGTTTCACCACGGTGACACACT...CTGCTCACCGTCATTGCCACCCCTGACACCATCTAATCCAGCAGGGTGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGTGTGTCACCGTGGTaGAACCGGGAGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSVSPW*NREPSL
Trigger: GAGGGAAGGCTCCCGGTTTCACCACGGTGACACACT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGCAGGTGATGGTCTCTaGGCCCTGAGTCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEAGDGL*ALSPKE
Trigger: TTCCTTGGGACTCAGGGCTCAGAGACCATCACCTGC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCTTCAGGACGCAGGTaGTGGTCTCTGAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPSGRR*WSLSPE
Trigger: CTCAGGGCTCAGAGACCATCACCTGCGTCCTGAAGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCATGCGCAGCACGTCGTaGACCTCCTCTGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPMRSTS*TSSVSN
Trigger: GTTTGACACAGAGGAGGTTCACGACGTGCTGCGCAT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGCAGGACGACCGAGTTaGAGGTGCTATGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGAGRPS*RCYAGP
Trigger: AGGACCTGCATAGCACCTTCAACTCGGTCGTCCTGC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATTCTGGGTAATTTGGTaGGAGGATGACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSFWVIW*EDDSRW
Trigger: CCATCTGGAGTCATCCTCTCACCAAATTACCCAGAA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGGCACGGTTGTTCCTaGGAAACTCCCCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPERHGCS*ETPQHG
Trigger: ACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACATCACGGTGGAACTTaGGCAGGACCTGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEHHGGT*AGPGWM
Trigger: CATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGACAATCAGGGGAGCTaGGTAATTCCCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEDNQGS*VIPTEG
Trigger: GCCCTCAGTGGGAATTACTCAGCTCCCCTGATTGTC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAGCTGGGCCTGGAACTaGTACTGTGTCTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSWAWN*YCVSKI
Trigger: TATCTTTGAGACACAGTATCAGTTCCAGGCCCAGCT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTGGCCTGACAGCGGATaGCCCTTTGGCCAGTATAGT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPWPDSG*PFGQYS
Trigger: ACTATACTGGCCAAAGGGTCATCCGCTGTCAGGCCA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAACTCCATGTCCCATCTaGCTGGCAAAACCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPETPCPI*LAKPAW
Trigger: CCACGCAGGTTTTGCCAGTCAGATGGGACATGGAGT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGAAGCCAGTCACTCTaGGCATGGCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGSQSL*AWLAAS
Trigger: AGAAGCAGCCAGCCATGCTCAGAGTGACTGGCTTCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGATCGCGGCTGCCACTaGGCTGCTGTTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEDRGCH*AAVGSK
Trigger: TTTGCTTCCAACAGCAGCTCAGTGGCAGCCGCGATC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGCAGGGCGAGGGCCTaGGTCCCAGCAGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGRARA*VPAVAD
Trigger: GTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACGTGCAGTTGGAACGTaGAGTTCTGGCCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPERAVGT*SSGQLI
Trigger: GATCAGCTGGCCAGAACTGCACGTTCCAACTGCACG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGCCTTGGGCACTGACTaGATAGTCGCTGATGAGGCG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCALGTD*IVADEA
Trigger: CGCCTCATCAGCGACTATGCAGTCAGTGCCCAAGGC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTTGAAGGTTGAACCCTaGTGGATGCCATTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPLKVEP*WMPLGS
Trigger: GCTGCCCAATGGCATCCAGCAGGGTTCAACCTTCAA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCCAGGGAACTGCCACTaGCATCAGTCTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPPGNCH*HQSGRG
Trigger: TCCTCTTCCAGACTGATGGCAGTGGCAGTTCCCTGG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCAGGGTCACCGCAACTaGCCTGCTCGATCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPQGHRN*PARSLH
Trigger: ATGAAGAGATCGAGCAGGGCAGTTGCGGTGACCCTG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTTCCCTCCGGCCATATaGAGGTATGCCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGFPPAI*RYARVT
Trigger: GGTGACCCTGGCATACCTGCATATGGCCGGAGGGAA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCCGGAGAGAGGATGGTaGCGCTGGGCGAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCPERGW*RWAKSG
Trigger: ACCTGACTTCGCCCAGCGGCACCATCCTCTCTCCGG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCGAGATCCAGTTAGCTaGCTCAGGGGCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGRDPVS*LRGWVK
Trigger: CTTCACCCAGCCCCTGAGGCAGCTAACTGGATCTCG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGCAGTTCAAAGCCCTTaGTGGTGTTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSAVQSP*WCFQHQ
Trigger: CTGATGCTGAAAACACCAGCAAGGGCTTTGAACTGC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCAGGCCCATCCCAGATaGGCAGCACGTCGTGAACCT +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRQAHPR*AARREP
Trigger: AGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGGATCCCAGGGTCATTaGAGGACGTTGCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEGSQGH*RTLLWT
Trigger: TGTCCACAGCAACGTCCTGCAATGACCCTGGGATCC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCCCGCAGGGAGCGATaGATGTTGGCGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPRRER*MLAGWA
Trigger: AGCCCAGCCCGCCAACATGCATCGCTCCCTGCGGGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCGAGGAAGAGGCTGTTaGTGCTGCTTTCAATGCGGC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPRGRGC*CCFQCG
Trigger: GCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCACTGCCCAGCCTCTTaGCATAGCGGGGTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCHCPAS*HSGVPA
Trigger: TGCCGGAACCCCGCTATGGCAAGAGGCTGGGCAGTG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGGCATAGCCGGAGTTaGATTCGAAGCGGACGATGG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGHSRS*IRSGRW
Trigger: CCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGCACTGTTCCGGGCATaGAGGAGATGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEALFRA*RRCGRG
Trigger: GCCACGCCCACATCTCCTGCATGCCCGGAACAGTGC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAAAGCCCACGGGCAGTaGTATTTTCCAGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPKAHGQ*YFPGAV
Trigger: GACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGACGCCGAGCCGTGGTaGTGTTTGCTGTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEDAEPW*CLLWPI
Trigger: GATGGGCCACAGCAAACAGCACCACGGCTCGGCGTC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGAGCCCTGGGCAGGCTaGAGTAAGGGGCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWREPWAG*SKGLNS
Trigger: GCTATTCAGCCCCTTACTGCAGCCTGCCCAGGGCTC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGCCTCCATCGGCCATaGTCCACGCTGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSLHRP*STLMLL
Trigger: CAGTAGCATCAGCGTGGAGCATGGCCGATGGAGGCT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGCCCACACATGCGGGTaGTGTTTCCCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGAHTCG*CFPPEY
Trigger: GTACTCTGGTGGGAAACAGCACCCGCATGTGTGGGC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCATCCAGCCCACACATaGGGGTGCTGTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEHPAHT*GCCFPP
Trigger: TGGTGGGAAACAGCACCCGCATGTGTGGGCTGGATG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGTCCCCCAAACGGATaGCATGAGCCGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGCPPNG*HEPGSQ
Trigger: CTGGGATCCCGGCTCATGGCATCCGTTTGGGGGACA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCTGACTGGCAAAACCTaGGTGGAGAGCCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGLTGKT*VESPPA
Trigger: TGCTGGTGGGCTCTCCACGCAGGTTTTGCCAGTCAG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTGCAGCTGGGCTGGGTaGCACTCCATGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRCSWAG*HSMSHL
Trigger: CAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTCAGGGTCGGATCTATaGAGCTGGGCTGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSGSDL*SWAGCH
Trigger: GTGGCACCCAGCCCAGCTGCATAGATCCGACCCTGA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCGTCTCTGGCTGCCTaGAGTGGTGGGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGASLAA*SGGGHS
Trigger: ACTGTGTCCCCCACCACTGCAGGCAGCCAGAGACGC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCGGCTGCCACTGAGCTaGTGTTGGAAGCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCRLPLS*CWKQSG
Trigger: GCCACTTTGCTTCCAACAGCAGCTCAGTGGCAGCCG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCGGCTGCCACTGAGCTaGTGTTGGAAGCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGRLPLS*CWKQSG
Trigger: GCCACTTTGCTTCCAACAGCAGCTCAGTGGCAGCCG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGCCGGGTGGCTATACTaGTGTGCACACTGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCAGWLY*CAHCAD
Trigger: GTCAGCACAGTGTGCACAGCAGTATAGCCACCCGGC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCCTTGGGGTAATCCTTaGTGCCGCTGTGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGPWGNP*CRCADG
Trigger: CCCATCTGCACAGCGGCAGCAAGGATTACCCCAAGG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTCCTGGCCAGACTCCTaGCCTATCCTCCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKESWPDS*PILPGS
Trigger: AGAGCCGGGGAGGATAGGGCAGGAGTCTGGCCAGGA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGGGGAGTTGAATCCTTaGCCCGAAGCTGCCTACGCG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRGELNP*PEAAYA
Trigger: CGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAGCCTCCATTGTGTCTaGTGGAAATGGACGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPSLHCV*WKWTPL
Trigger: GAGAGGCGTCCATTTCCAGCAGACACAATGGAGGCT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCAGGGGTAGGCTCCTaGCTCTGTCAGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPGVGS*LCQPPL
Trigger: CAATGGAGGCTGACAGAGGCAGGAGCCTACCCCTGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGTGAAGGGCCTCATCTaGCCTGTTCCCTTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGVKGLI*PVPFQA
Trigger: GGCTTGGAAGGGAACAGGGCAGATGAGGCCCTTCAC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACGCAGATTCTCTGGCTaGGGTGGACCATCAAACACC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPERRFSG*GGPSNT
Trigger: GGTGTTTGATGGTCCACCCCAGCCAGAGAATCTGCG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGGAGAACTTCATAGGTaGCGTGGAAGCCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEGELHR*RGSLGH
Trigger: GTGCCCAAGGCTTCCACGCCACCTATGAAGTTCTCC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACAGGTGAGCACGGCGTaGCCCTCCAGGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGQVSTA*PSRKKP
Trigger: TGGCTTCTTCCTGGAGGGCCACGCCGTGCTCACCTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTTCTCAGAGCCAGCGTaGCAGGTGAGCACGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCFSEPA*QVSTAW
Trigger: CCACGCCGTGCTCACCTGCCACGCTGGCTCTGAGAA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGCTGATAACGGGGGCTaGGAGGCTGGCTCCGGTGAA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEADNGG*EAGSGE
Trigger: TTCACCGGAGCCAGCCTCCCAGCCCCCGTTATCAGC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTGATAACGGGGGCTaGGAGGCTGGCTCCGGTGAA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGADNGG*EAGSGE
Trigger: TTCACCGGAGCCAGCCTCCCAGCCCCCGTTATCAGC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGAGGGGCCTCGAAGGTaGGCATCACACATGCGGGCT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCEGPRR*ASHMRA
Trigger: AGCCCGCATGTGTGATGCCCACCTTCGAGGCCCCTC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGTCCTCTGGGTAGTTaGGAGACAGGACAACCCCAG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSPLGS*ETGQPQ
Trigger: CTGGGGTTGTCCTGTCTCCCAACTACCCAGAGGACT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCATGGAGGAGGGAAGCTaGTTTCCTGAGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPMEEGS*FPEKVP
Trigger: GGGCACCTTCTCAGGAAACCAGCTTCCCTCCTCCAT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGCCCCTCTTCCCTGTaGAGTGGTCAGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESPSSL*SGQSGT
Trigger: AGTTCCAGACTGACCACTCCACAGGGAAGAGGGGCT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGCTCCACTGGAAGTTaGGCTCACACTCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGSTGS*AHTPEA
Trigger: AGCCTCTGGAGTGTGAGCCCAACTTCCAGTGGAGCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCACCCTGGCGACAAGATaGTCCCACTGGAGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPTLATR*SHWSLE
Trigger: TTCAAGGCTCCAGTGGGACCATCTTGTCGCCAGGGT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCGGATGCTGTAGGCTaGGACCTCGGGCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEPDAVG*DLGLLT
Trigger: TGTGAGGAGCCCGAGGTCCCAGCCTACAGCATCCGG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCTGAATTCCCTTCCCTaGCTGGGTCTGGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPLNSLP*LGLDGV
Trigger: TACTCCATCCAGACCCAGCCAGGGAAGGGAATTCAG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGAAGTGTAGCCCAATaGTGCAGCCGGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGSVAQ*CSRPLL
Trigger: AAGCAGAGGCCGGCTGCACCATTGGGCTACACTTCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTGCTATGCAGGTCCTTaGGCAGGGCCGGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCCYAGP*AGPGHS
Trigger: TGAGTGGCCCGGCCCTGCCCAAGGACCTGCATAGCA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGCATGTTGGCGGGCTaGGCTGCCAGAAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAECMLAG*AARRTC
Trigger: ACAGGTTCTTCTGGCAGCCCAGCCCGCCAACATGCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGAGCGATGCATGTTaGCGGGCTGGGCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGGSDAC*RAGLPE
Trigger: TTCTGGCAGCCCAGCCCGCCAACATGCATCGCTCCC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGGAGCGATGCATGTTaGCGGGCTGGGCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCGSDAC*RAGLPE
Trigger: TTCTGGCAGCCCAGCCCGCCAACATGCATCGCTCCC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGAGGATGACTCCAGATaGTCCTGTCAGGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGEDDSR*SCQVSP
Trigger: GGGGGAGACCTGACAGGACCATCTGGAGTCATCCTC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGTCACACTCCTTGCCTaGCGGGTAGGGTTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCVTLLA*RVGFWV
Trigger: TACCCAGAACCCTACCCGCCAGGCAAGGAGTGTGAC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGTTCTGGGGGTAGTTaGGGGACAAGACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESSGGS*GTRPLR
Trigger: ACGGAGTGGTCTTGTCCCCCAACTACCCCCAGAACT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGCACTGCGTGGCGCTaGTTCGAGGAACCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGCTAWR*FEEPLG
Trigger: ACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGAGGCACTCGATCTCTaGCGACCCCTGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWREALDL*RPLQGI
Trigger: TATGCCCTGCAGGGGTCGCCAGAGATCGAGTGCCTC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGCTGAGACATTCCATTaGGCCAAGGCCCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEAETFH*AKAPGT
Trigger: TGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCGTGGTTGGGCTCGGTaGAGAAGTTCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPRGWAR*RSSGTG
Trigger: TCCAGTTCCTGAACTTCTCCACCGAGCCCAACCACG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTACACGGTGGTCTCGTaGGACGTGGAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGYTVVS*DVERRE
Trigger: CTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAAAGGGCTCTGGGTCTaGGCACTCTTGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSKGLWV*ALLKFI
Trigger: TATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAGCCAGACACAGTCCTaGGAGCTGGAGTACGGGCTA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSQTQS*ELEYGL
Trigger: TAGCCCGTACTCCAGCTCCCAGGACTGTGTCTGGCT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGTGGCTGCATCACGGTaGAACTTGAGCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGVAASR*NLSRTW
Trigger: CCAGGTCCTGCTCAAGTTCCACCGTGATGCAGCCAC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCCTAGGATGAAGCCATaGAGTGGAGCCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGPRMKP*SGALGR
Trigger: CCTGCCCAGGGCTCCACTCCATGGCTTCATCCTAGG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCATGGAGCCCCCGGGCTaGGTGCTGGTCTGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRMEPPG*VLVWPR
Trigger: CCTAGGCCAGACCAGCACCCAGCCCGGGGGCTCCAT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCTTGACAGAGAGGGATaGCTTCGCTCCACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLDREG*LRSTGG
Trigger: ACCACCTGTGGAGCGAAGCCATCCCTCTCTGTCAAG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCACAGGGACACACTGTaGTGGGACATTGCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPHRDTL*WDIAVA
Trigger: AGCAACCGCAATGTCCCACCACAGTGTGTCCCTGTG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAAGCCAGCATTGCATTaGTACACCACACTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEKPALH*YTTLPR
Trigger: CCGGGGCAGTGTGGTGTACCAATGCAATGCTGGCTT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGCGGGGAGCCCGGATaGCCACAGGACACCAGCACA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGGEPG*PQDTST
Trigger: TGTGCTGGTGTCCTGTGGCCATCCGGGCTCCCCGCC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCGCAAACTCCCACGCTaGTTCCTGAGCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCRKLPR*FLSSEG
Trigger: TCCCTCACTGCTCAGGAACCAGCGTGGGAGTTTGCG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGAGGCAGGTCCTGGTaGTGGAGCCCTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGGRSW*WSPEAG
Trigger: ACCTGCTTCAGGGCTCCACCACCAGGACCTGCCTCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGCAGGTCCTGGTaGTGGAGCCCTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCGGRSW*WSPEAG
Trigger: ACCTGCTTCAGGGCTCCACCACCAGGACCTGCCTCC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGACGTTGGCATGCGTTaGCGTCTCTGGCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGDVGMR*RLWLPA
Trigger: TGCAGGCAGCCAGAGACGCCAACGCATGCCAACGTC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGCTTGGGTGAGCGGTaGCTCCCGGGCAGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCGLGER*LPGSVD
Trigger: ATCAACACTGCCCGGGAGCCACCGCTCACCCAAGCC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAACGAAGATGGGCACTaGGCACTGTGCTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCNEDGH*ALCSGE
Trigger: CTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGAGACGAACGAAGATaGGCACTGGGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGDERR*ALGTVL
Trigger: GAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGAGTGTGAGTGTGTCTaGATTGGCCCTCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPECECV*IGPLPP
Trigger: TGGAGGGAGAGGGCCAATCCAGACACACTCACACTC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATCCTCGAGCATCTCATaGAACTTTACAAGGAGACGC +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSSSSIS*NFTRRR
Trigger: GCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGGTATATGGCGTAGATaGTGGGTGAAGGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPGIWRR*WVKGLI
Trigger: GATGAGGCCCTTCACCCACCATCTACGCCATATACC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGGAGCTTGGTCTGAGTaGCAAGGCAGCGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEGAWSE*QGSGLQ
Trigger: CTGAAGTCCGCTGCCTTGCCACTCAGACCAAGCTCC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGACACCAAGAGACACTaGGGGCGGGGACGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCDTKRH*GRGRSH
Trigger: ATGGGACCGTCCCCGCCCCCAGTGTCTCTTGGTGTC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCGGGGGCGATGCTTATaGGCCTCATTCACAATAGCC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAERGRCL*ASFTIA
Trigger: GGCTATTGTGAATGAGGCTCATAAGCATCGCCCCCG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGCAGTTCTGGCCAGCTaGTCTTGGGTGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGAVLAS*SWVVAL
Trigger: CAAAGCCACCACCCAAGATCAGCTGGCCAGAACTGC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCCTTGTCACCGAGGTTaGAGGTTGAACCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEPCHRG*RLNPAG
Trigger: TCCAGCAGGGTTCAACCTTCAACCTCGGTGACAAGG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGAGCCAGCGTGGCAGGTaGGCACGGCGTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLSQRGR*ARRGPP
Trigger: TGGAGGGCCACGCCGTGCTCACCTGCCACGCTGGCT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAGTGGGGGCTGGAGATaGTGCCACTCTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASGGWR*CHSGPA
Trigger: TGCGGGGCCAGAGTGGCATCATCTCCAGCCCCCACT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTTGGTATTGGGCACTaGATCCGCGCTGCCGGTGGT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELGIGH*IRAAGG
Trigger: ACCACCGGCAGCGCGGATTCAGTGCCCAATACCAAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGCCCTCGTTGCAGGTaGACTGGACGCTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSPRCR*TGRWIL
Trigger: TAGGATCCAGCGTCCAGTTCACCTGCAACGAGGGCT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGCTGGCACTCAAACTTaGGTGTGTCACCGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEAGTQT*VCHRGE
Trigger: TTCACCACGGTGACACACTCAAGTTTGAGTGCCAGC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCTTCAGGACGCAGGTaGTGGTCTCTGAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEPSGRR*WSLSPE
Trigger: CTCAGGGCTCAGAGACCATCACCTGCGTCCTGAAGG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCCGATCAAGGGCGCTaGGTAAGTCCGCCCATCGCG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPDQGR*VSPPIA
Trigger: CGCGATGGGCGGACTTACTCAGCGCCCTTGATCGGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCACTGGAGCCTTGAATaGAGCCACCACAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPHWSLE*SHHREL
Trigger: AAGCTCTCTGTGGTGGCTTCATTCAAGGCTCCAGTG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGACAGCAAAGTACCCTaGGTGCCTGTGACTGAATTC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPDSKVP*VPVTEF
Trigger: GAATTCAGTCACAGGCACTCAGGGTACTTTGCTGTC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCGATCTTCACACAGCTaGTCTCTGCACTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPRSSHS*SLHFPA
Trigger: TGCAGGGAAGTGCAGAGATCAGCTGTGTGAAGATCG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCGTGGCAGTAGTAGGTaGCGGAGGAGCCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKERGSSR*RRSPAS
Trigger: TGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGTGGCCAAGGGCAGTaGTTCTCCTGTATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGGGQGQ*FSCMGA
Trigger: GGCTCCCATACAGGAGAATCACTGCCCTTGGCCACC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCTGCCCCTGCGCTCTGTaGGGTTGCCTCCACACGGCA +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETCPCAL*GCLHTA
Trigger: TGCCGTGTGGAGGCAACCTCACAGAGCGCAGGGGCA...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGGCACGGTTGTTCCTaGGAAACTCCCCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCRHGCS*ETPQHG
Trigger: ACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCCTGATACTCCAGCTTaGATCCTGGCCGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGPDTPA*ILADSG
Trigger: CCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTGCCATGTTGACACGTaGGGACAGGGTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRCHVDT*GQGGQS
Trigger: TGACTGGCCACCCTGTCCTCACGTGTCAACATGGCA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACGGTTGGTGCCATGTTaGCACGTGAGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGRLVPC*HVRTGW
Trigger: CCACCCTGTCCTCACGTGTCAACATGGCACCAACCG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGAGGAGGGCATTTGGTaGGTGGATAAGCGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEEEGIW*VDKRRK
Trigger: CTTTCTCCGCTTATCCACTCACCAAATGCCCTCCTC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCTGAGTAATTCCCACTaGGGGCTTTCAGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLSNSH*GLSAED
Trigger: GTCCTCTGCTGAAAGCCCTCAGTGGGAATTACTCAG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACTGAGTAATTCCCACTaGGGGCTTTCAGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPELSNSH*GLSAED
Trigger: GTCCTCTGCTGAAAGCCCTCAGTGGGAATTACTCAG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGTTGCTTGAGCTGGTaGCAATCAGGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSCLSW*QSGELS
Trigger: ACTCAGCTCCCCTGATTGTCACCAGCTCAAGCAACT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGTAGGCGTGATCAGATaGCCAACGCAGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPVGVIR*PTQVHR
Trigger: TCTGTGTACCTGCGTTGGTCATCTGATCACGCCTAC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTGGTCTGGCCTAGGATaGAGCCATGGAGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCWSGLG*SHGVEP
Trigger: GGGCTCCACTCCATGGCTTCATCCTAGGCCAGACCA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTGGTCTGGCCTAGGATaGAGCCATGGAGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEWSGLG*SHGVEP
Trigger: GGGCTCCACTCCATGGCTTCATCCTAGGCCAGACCA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAGCCAGGGTCACAGATaGGCATCAGCTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKESQGHR*ASAGPG
Trigger: TCCAGGCCCAGCTGATGCTCATCTGTGACCCTGGCT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGGCCTGACAGCGGATaGCCCTTTGGCCAGTATAGT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEWPDSG*PFGQYS
Trigger: ACTATACTGGCCAAAGGGTCATCCGCTGTCAGGCCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCATTTGCCATTGGCCTaGCAGCGGATGACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCHLPLA*QRMTLW
Trigger: CCAAAGGGTCATCCGCTGTCAGGCCAATGGCAAATG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTCCCACGCTGGTTCCTaGGCAGTGAGGGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRSHAGS*AVREGA
Trigger: GGCTCCCTCCCTCACTGCTCAGGAACCAGCGTGGGA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACCTTCCCATTGGGGATaGGCGGAGGTGGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGPSHWG*AEVACT
Trigger: TGTGCAAGCCACCTCCGCTCATCCCCAATGGGAAGG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCATTTCCCTCACAGGTaGACACCGCGGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEHFPHR*TPRAGR
Trigger: TCTCCCTGCCCGCGGTGTTCACCTGTGAGGGAAATG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACATTTCCCTCACAGGTaGACACCGCGGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGHFPHR*TPRAGR
Trigger: TCTCCCTGCCCGCGGTGTTCACCTGTGAGGGAAATG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCTGGCAGGAGTAGATaGGCGTGTAGCCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEPGRSR*ACSPWR
Trigger: CCTCCATGGGCTACACGCTCATCTACTCCTGCCAGG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGAAGCCAGTCACTCTaGGCATGGCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGSQSL*AWLAAS
Trigger: AGAAGCAGCCAGCCATGCTCAGAGTGACTGGCTTCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCAGAGCCTTGGTAGATaGAGGTGGCTCCGGAGGACT +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRQSLGR*RWLRRT
Trigger: AGTCCTCCGGAGCCACCTTCATCTACCAAGGCTCTG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCTGACTCCAGCAGCCTaGGGTCCAGTCTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCLTPAA*GPVFES
Trigger: GCTTTCAAAGACTGGACCTCAGGCTGCTGGAGTCAG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGATCGCGGCTGCCACTaGGCTGCTGTTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRDRGCH*AAVGSK
Trigger: TTTGCTTCCAACAGCAGCTCAGTGGCAGCCGCGATC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTGTGACATGAATCTCTaGGGCCAGCATGTCACACGT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPCDMNL*GQHVTR
Trigger: ACGTGTGACATGCTGGCCTCAGAGATTCATGTCACA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGTGTCCAGCTTTGGTaGGGGATGGGGAAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESVQLW*GMGKRV
Trigger: TACTCTCTTCCCCATCCCTCACCAAAGCTGGACACT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR TCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACTGGTCAGGCTGGTCTTaGACTCCTCACCTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHWSGWS*TPHLRR
Trigger: TCGCCTGAGGTGAGGAGTTCAAGACCAGCCTGACCA...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCGTGCAGTTGGAACGTaGAGTTCTGGCCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCRAVGT*SSGQLI
Trigger: GATCAGCTGGCCAGAACTGCACGTTCCAACTGCACG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAGAGAGGGTGGTGGCTaGACTAACAATGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGREGGG*TNNGGW
Trigger: CCAGCCACCATTGTTAGTGCAGCCACCACCCTCTCT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGGCATCATCAGCTCTaGAGGAAGGCAGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAERHHQL*RKAGGS
Trigger: ACTTCCCCCTGCCTTCCTGCAGAGCTGATGATGCCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGCACTGAATCCGCGCTaGCGGTGGTTGCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCALNPR*RWLPSD
Trigger: ATCGGATGGCAACCACCGGCAGCGCGGATTCAGTGC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGCCATATGCAGGTATaGCAGGGTCACCGCAACTGC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGHMQV*QGHRNC
Trigger: GCAGTTGCGGTGACCCTGGCATACCTGCATATGGCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCGGCCATATGCAGGTATaGCAGGGTCACCGCAACTGC +
Preference number: 4 (lower is better)
Translates to: CSCCYNLQGSQGRGPWISGHMQV*QGHRNC
Trigger: GCAGTTGCGGTGACCCTGGCATACCTGCATATGGCC...GCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp GCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCTTTCCCTCCGGCCATATaGAGGTATGCCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: AAVVTTCKVPRDGAPGLAFPPAI*RYARVT
Trigger: GGTGACCCTGGCATACCTGCATATGGCCGGAGGGAA...AGCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTTGGCGGGCTGGGCTaGCAGAAGAACCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGVGGLG*QKNLFS
Trigger: CGAGAACAGGTTCTTCTGGCAGCCCAGCCCGCCAAC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGAGGCTGTTGCTGCTaGTTTCAATGCGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAERGCCC*FQCGLG
Trigger: TCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGAAGAGGCTGTTGCTaGTGCTTTCAATGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGRGCC*CFQCGL
Trigger: CAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAGCATTGCTCACAGATaGATCGCTGCGGAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSIAHR*IAAEGE
Trigger: CTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGCATTGCTCACAGATaGATCGCTGCGGAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAESIAHR*IAAEGE
Trigger: CTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAGCTCAGGGTCGAGGTaGCCTCAACTTCGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKESSGSR*PQLRSP
Trigger: GGGGCTACGAAGTTGAGGGCACCTCGACCCTGAGCT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAAGCCTCTGGCTGGTaGGAGGCCTTTGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGEASGW*EAFGAE
Trigger: TTCAGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCAACTTGGATCTGGATaGCAGCGCCTTCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGQLGSG*QRLRGP
Trigger: TGGTCCCCGAAGGCGCTGGCATCCAGATCCAAGTTG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATGTTCCCCCACACTGTaGAATACAGAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPECSPTL*NTEWRR
Trigger: CCTCCTCCACTCTGTATTGCACAGTGTGGGGGAACA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTGTTCCCCCACACTGTaGAATACAGAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPCSPTL*NTEWRR
Trigger: CCTCCTCCACTCTGTATTGCACAGTGTGGGGGAACA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCAGAGGGCTCTGTCTaGAGCAGGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEPEGSV*SRLRLR
Trigger: CCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCTGG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAGCCGTGGTGCTGTTTaGTGTGGCCCATCCCAGATG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSRGAV*CGPSQM
Trigger: CATCTGGGATGGGCCACAGCAAACAGCACCACGGCT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGGTACAGATGGCCATaGTGTGTCCCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGYRWP*CVPPGG
Trigger: ACCGCCTGGTGGGACACAGCATGGCCATCTGTACCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGTGGGACATTGCGGTTaGTCCATAGGCCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCVGHCG*SIGLCP
Trigger: TGGACACAGGCCTATGGAGCAACCGCAATGTCCCAC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCCCCGAGGCTCCATTTaGCATTGGCCTGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCPRGSI*HWPDSG
Trigger: TCCGCTGTCAGGCCAATGGCAAATGGAGCCTCGGGG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAGAGCCCATTGGCCATaGACTCACGCACCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKERAHWP*THAPWS
Trigger: GCTCCAGGGTGCGTGAGTGCATGGCCAATGGGCTCT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGATGCGCACAGACATaGCGATCAGGCGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRRCAQT*RSGGSQ
Trigger: CTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACACAGAAAGGGGTCTTaGCCGACCAGTGATGATCCT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEHRKGS*PTSDDP
Trigger: AGGATCATCACTGGTCGGGCAAGACCCCTTTCTGTG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGCTGTACCGCACCACTaGTCCCACAGTATAACTGTC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPAVPHH*SHSITV
Trigger: GACAGTTATACTGTGGGAGCAGTGGTGCGGTACAGC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTCAGGGTCGGATCTATaGAGCTGGGCTGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSGSDL*SWAGCH
Trigger: GTGGCACCCAGCCCAGCTGCATAGATCCGACCCTGA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAACGGAAGAGGACTGTaGTTCCAACCTGGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPNGRGL*FQPGSP
Trigger: AGGGCTACCAGGTTGGAAGCACAGTCCTCTTCCGTT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGCCCCGACGTTGGCATaGGTTGGCGTCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAAPTLA*VGVSGC
Trigger: GCAGCCAGAGACGCCAACGCATGCCAACGTCGGGGC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCTGAGCATGGCTGGCTaGTTCTTCCCCTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLSMAG*FFPWYS
Trigger: TGAATACCAGGGGAAGAAGCAGCCAGCCATGCTCAG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGACCTGCCAGGTCTTTTaGTGGCTATGGTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAETCQVF*WLWSAA
Trigger: AGCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGCCTCCATTGTGTCTaGTGGAAATGGACGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESLHCV*WKWTPL
Trigger: GAGAGGCGTCCATTTCCAGCAGACACAATGGAGGCT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGGTAGAAGCCGTGGTTaGACCGGTAAGACACAGTGG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEGRSRG*TGKTQW
Trigger: CCACTGTGTCTTACCGGTGCAACCACGGCTTCTACC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGACTGGAACACAAGCTaGATTCTGTGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPDWNTS*ILCCSS
Trigger: GGAAGAGCAGCACAGAATCCAGCTTGTGTTCCAGTC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAATTCTCTGGCTGGGGTaGACCATCAAACACCGACAG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEILWLG*TIKHRQ
Trigger: CTGTCGGTGTTTGATGGTCCACCCCAGCCAGAGAAT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACGTACGCAGATTCTCTaGCTGGGGTGGACCATCAAA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPERTQIL*LGWTIK
Trigger: TTTGATGGTCCACCCCAGCCAGAGAATCTGCGTACG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCCAGCTCAGCCAGGATaGTCCATGTGCAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGPAQPG*SMCSRH
Trigger: ATGCCGACTGCACATGGACCATCCTGGCTGAGCTGG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAATCCGCGCTGCCGGTaGTTGCCATCCGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGNPRCR*LPSDVK
Trigger: CTTCACATCGGATGGCAACCACCGGCAGCGCGGATT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGCTGTTGTCTTTGCTaGGCATCAGCTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGCCLC*ASASHL
Trigger: GAGGTGTGAAGCTGATGCCCAGCAAAGACAACAGCC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCGTTGCAGGTGAACTaGACGCTGGATCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSLQVN*TLDPNL
Trigger: CAGGTTAGGATCCAGCGTCCAGTTCACCTGCAACGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGCTCAAAGGCGGGCTaGCACTCAAACTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESSKAG*HSNLSV
Trigger: CACACTCAAGTTTGAGTGCCAGCCCGCCTTTGAGCT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGAGAACACGCAGCCTaGCTTCTTAGCCGACCATTG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGEHAA*LLSRPL
Trigger: CAATGGTCGGCTAAGAAGCCAGGCTGCGTGTTCTCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAGTCCTCTGGGTAGTTaGGAGACAGGACAACCCCAG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSPLGS*ETGQPQ
Trigger: CTGGGGTTGTCCTGTCTCCCAACTACCCAGAGGACT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTCGAGACGGGCCACGTaGCCACTGCTTGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSRRAT*PLLVME
Trigger: CTCCATCACAAGCAGTGGCCACGTGGCCCGTCTCGA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGCCCCTCTTCCCTGTaGAGTGGTCAGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAESPSSL*SGQSGT
Trigger: AGTTCCAGACTGACCACTCCACAGGGAAGAGGGGCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTTTGATGGGGTAGCCTaGCTGGGCCTCAATCACCCA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGFDGVA*LGLNHP
Trigger: TGGGTGATTGAGGCCCAGCCAGGCTACCCCATCAAA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGACCCTGGCGACAAGATaGTCCCACTGGAGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAETLATR*SHWSLE
Trigger: TTCAAGGCTCCAGTGGGACCATCTTGTCGCCAGGGT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTGCATGTTGGCGGGCTaGGCTGCCAGAAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRCMLAG*AARRTC
Trigger: ACAGGTTCTTCTGGCAGCCCAGCCCGCCAACATGCA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGCTTTCAATGCGGCCTaGGAGCTGGGAGCCATAGAA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEAFNAA*ELGAIE
Trigger: TTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGTTCTGGGGGTAGTTaGGGGACAAGACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSSGGS*GTRPLR
Trigger: ACGGAGTGGTCTTGTCCCCCAACTACCCCCAGAACT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGTGATTCTCCTGTATaGGAGCCCGAGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSDSPV*EPEREL
Trigger: CAGCTCCCTCTCGGGCTCCCATACAGGAGAATCACT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCAAAGTGGAAGCCTCTaGCTGGTGCGAGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRQSGSL*LVRGLW
Trigger: CCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCCCACATTGCACTCACCCTGGACGATAGCTCCTGGGAATGGCAGTCACAGCTGTGCACTGCGTGGCGCTaGTTCGAGGAACCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SHIALTLDDSSWEWQSQLCTAWR*FEEPLG
Trigger: ACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCA...CAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCGTGGTTGGGCTCGGTaGAGAAGTTCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGRGWAR*RSSGTG
Trigger: TCCAGTTCCTGAACTTCTCCACCGAGCCCAACCACG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGGGAGTGGTCGCTGTaGAAATACACGGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCWEWSL*KYTVVS
Trigger: CGAGACCACCGTGTATTTCCACAGCGACCACTCCCA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCTCCAGCTTGAATCCTaGCCGATTCTGGGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCLQLES*PILGVV
Trigger: GACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGCACTTGGGCAGGGGGTaGTCCCAGTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ISGATGVPNERGMGTEQMHLGRG*SQFRLV
Trigger: CACCAACCGGAACTGGGACCACCCCCTGCCCAAGTG...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGTGGCTGCATCACGGTaGAACTTGAGCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRVAASR*NLSRTW
Trigger: CCAGGTCCTGCTCAAGTTCCACCGTGATGCAGCCAC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGATGAAGCCATGGAGTaGAGCCCTGGGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGDEAME*SPGQAA
Trigger: TGCAGCCTGCCCAGGGCTCCACTCCATGGCTTCATC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTGCAGCCAAAGTGGATaGAGCCCCCGGGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLACSQSG*SPRAGC
Trigger: GCACCCAGCCCGGGGGCTCCATCCACTTTGGCTGCA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGTGCCGGGTACAGATaGCCATGCTGTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGAGYR*PCCVPP
Trigger: TGGTGGGACACAGCATGGCCATCTGTACCCGGCACC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCTTGACAGAGAGGGATaGCTTCGCTCCACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELDREG*LRSTGG
Trigger: ACCACCTGTGGAGCGAAGCCATCCCTCTCTGTCAAG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCACACCATTCCATTCTTaGGGGCCTCAGGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCTPFHS*GPQEAH
Trigger: GTGGGCTTCCTGAGGCCCCCAAGAATGGAATGGTGT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAAGCCAGCATTGCATTaGTACACCACACTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGKPALH*YTTLPR
Trigger: CCGGGGCAGTGTGGTGTACCAATGCAATGCTGGCTT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCGCAAACTCCCACGCTaGTTCCTGAGCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGRKLPR*FLSSEG
Trigger: TCCCTCACTGCTCAGGAACCAGCGTGGGAGTTTGCG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCGAAGGCCATTGGCTaGAATCCCAGGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPKAIG*NPRVTT
Trigger: TGTGGTGACCCTGGGATTCCAGCCAATGGCCTTCGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACCAGCCGAAGGCCATTaGCTGGAATCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGPAEGH*LESQGH
Trigger: GTGACCCTGGGATTCCAGCCAATGGCCTTCGGCTGG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTGGCAAAACCTGCGTaGAGAGCCCACCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELAKPA*RAHQHQ
Trigger: CTGGTGCTGGTGGGCTCTCCACGCAGGTTTTGCCAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTCTATGCAGCTGGGCTaGGTGCCACTCCATGTCCCA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSMQLG*VPLHVP
Trigger: TGGGACATGGAGTGGCACCCAGCCCAGCTGCATAGA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTCTATGCAGCTGGGCTaGGTGCCACTCCATGTCCCA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSMQLG*VPLHVP
Trigger: TGGGACATGGAGTGGCACCCAGCCCAGCTGCATAGA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCAGGGTCCGCACACGTaGTCAGGGTCGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEQGPHT*SGSDLC
Trigger: GCATAGATCCGACCCTGACCACGTGTGCGGACCCTG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGACCTCCAGGCAGATaGGCGGCTTGCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGPPGR*AACLSS
Trigger: GCTGGACAGGCAAGCCGCCCATCTGCCTGGAGGTCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGAGACGAACGAAGATaGGCACTGGGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGDERR*ALGTVL
Trigger: GAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCTGCCGCTGTGCAGATaGGCCGTTCATCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRLPLCR*AVHQQT
Trigger: TGTCTGCTGATGAACGGCCCATCTGCACAGCGGCAG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGTCTTTTGCTGGCTATaGTCAGCGGCTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRVFCWL*SAAAGS
Trigger: GCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGAC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTGCCAGGTCTTTTGCTaGCTATGGTCAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGCQVFC*LWSAAA
Trigger: AGCAGCCGCTGACCATAGCCAGCAAAAGACCTGGCA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGAGTGTGAGTGTGTCTaGATTGGCCCTCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEECECV*IGPLPP
Trigger: TGGAGGGAGAGGGCCAATCCAGACACACTCACACTC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCATATGGCGTAGATGGTaGGTGAAGGGCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPIWRRW*VKGLIC
Trigger: GCAGATGAGGCCCTTCACCCACCATCTACGCCATAT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTACCTGTGCGGGCCGCTaGCGTGGACCTGACGAACAC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLATCAGR*RGPDEH
Trigger: GTGTTCGTCAGGTCCACGCCAGCGGCCCGCACAGGT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTTGGGTGGTGGCTTTaGACTTGCCATCTAGGGCCG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELGWWL*TCHLGP
Trigger: CGGCCCTAGATGGCAAGTTCAAAGCCACCACCCAAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGCAGTTCTGGCCAGCTaGTCTTGGGTGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCAVLAS*SWVVAL
Trigger: CAAAGCCACCACCCAAGATCAGCTGGCCAGAACTGC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGCTGCTCTTCCGCGGTaGTGGTCCACGTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAAALPR*WSTCSW
Trigger: CCAACTGCACGTGGACCATCACCGCGGAAGAGCAGC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCACCGAGGTTGAAGGTTaGACCCTGCTGGATGCCATT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCTEVEG*TLLDAI
Trigger: AATGGCATCCAGCAGGGTTCAACCTTCAACCTCGGT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAAGCCGATGTCCGAGTaGCTCTTGTCGGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCKPMSE*LLSVEK
Trigger: CTTCTCTACCGACAAGAGTCACTCGGACATCGGCTT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGTCCCACTGGAGCCTTaGATGAAGCCACCACAGAGA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRVPLEP*MKPPQR
Trigger: TCTCTGTGGTGGCTTCATTCAAGGCTCCAGTGGGAC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCTCCAAGTCGTACTCTaGGAAGGTGATGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPLQVVL*EGDVES
Trigger: GGATTCAACATCACCTTCTCAGAGTACGACTTGGAG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGCAGGACGACCGAGTTaGAGGTGCTATGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEAGRPS*RCYAGP
Trigger: AGGACCTGCATAGCACCTTCAACTCGGTCGTCCTGC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCGATCTTCACACAGCTaGTCTCTGCACTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGRSSHS*SLHFPA
Trigger: TGCAGGGAAGTGCAGAGATCAGCTGTGTGAAGATCG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGATGACGTAGTCTGGTaGGACGGTCACTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEDDVVW*DGHFPV
Trigger: GACTGGAAAGTGACCGTCTCACCAGACTACGTCATC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGCCCGAGAGGGAGCTaGGGAGCCGCGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSPRGS*GAASAG
Trigger: GCCAGCACTCGCGGCTCCTCAGCTCCCTCTCGGGCT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCCCACATTGCACTCACCCTGGACGATAGCTCCTGGGAATGGCAGTCACAGCTGCACACACGTGGGCGCTaGGACATTCCATTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SHIALTLDDSSWEWQSQLHTRGR*DIPLGQ
Trigger: TTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTG...CAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGCACTCGAAGGTCACTaGTTGTCCCACGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGALEGH*LSHVVA
Trigger: GGCTACAACGTGGGACAATCAGTGACCTTCGAGTGC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATGGCCATGCTCCGGGTaGAGACGCCGAGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTWPCSG*RRRAVV
Trigger: CACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCATCACGGTGGAACTTaGGCAGGACCTGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGHHGGT*AGPGWM
Trigger: CATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAATTCTTCATTCTCTGTaGCGACTTCGGCGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEILHSL*RLRRWG
Trigger: TCCCCAACGCCGAAGTCGTCACAGAGAATGAAGAAT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCAGAGGACTCTGTCCTaGTGGACCATCAAAAATCTC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPQRTLS*WTIKNL
Trigger: GAGATTTTTGATGGTCCATCAGGACAGAGTCCTCTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGCCTGACAGCGGATaGCCCTTTGGCCAGTATAGT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGWPDSG*PFGQYS
Trigger: ACTATACTGGCCAAAGGGTCATCCGCTGTCAGGCCA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCCAAACGGATGCCATaGGCCGGGATCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPKRMP*AGIPGS
Trigger: TGACCCTGGGATCCCGGCTCATGGCATCCGTTTGGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGCATAAGTCACACTTaGGCCCCACATGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGISHT*APHEVR
Trigger: TCTGACTTCATGTGGGGCTCAAGTGTGACTTATGCC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCTCTTCCATAGGACGTaGATGAAGGAGAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLFHRT*MKERCV
Trigger: CACACACCTCTCCTTCATTCACGTCCTATGGAAGAG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGTGGGGAACAGGGCATaGAGCATCCTTCATGCGCAC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEVGNRA*SILHAH
Trigger: GTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCAC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGCACTCTGACCGCATaGTGGGATGTGTCCTACTGT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCCTLTA*WDVSYC
Trigger: ACAGTAGGACACATCCCATCATGCGGTCAGAGTGCA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACTGGTTTCTGCACGCTaGCCGGGTTTCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLVSAR*PGFCTL
Trigger: CAGAGTGCAGAAACCCGGTCAGCGTGCAGAAACCAG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTGGTTTCTGCACGCTaGCCGGGTTTCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLVSAR*PGFCTL
Trigger: CAGAGTGCAGAAACCCGGTCAGCGTGCAGAAACCAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCAGTGGTGCCGAAGCTaGACCTGTGCGGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLQWCRS*TCAGRW
Trigger: CCAGCGGCCCGCACAGGTTCAGCTTCGGCACCACTG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGAAGAAGCCAAGGTTaGAGCTGTAGCGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGRSQG*SCSGPC
Trigger: ACAAGGTCCGCTACAGCTGCAACCTTGGCTTCTTCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGAGTGCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATCCAGGGAACTGCCACTaGCATCAGTCTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RVQLLLQPARFPGTGPLDPGNCH*HQSGRG
Trigger: TCCTCTTCCAGACTGATGGCAGTGGCAGTTCCCTGG...ATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTTCCCTCCGGCCATATaGAGGTATGCCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEFPPAI*RYARVT
Trigger: GGTGACCCTGGCATACCTGCATATGGCCGGAGGGAA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCGGAGAGAGGATGGTaGCGCTGGGCGAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPERGW*RWAKSG
Trigger: ACCTGACTTCGCCCAGCGGCACCATCCTCTCTCCGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTTCGGAGAGTTCGAATaGCCTGGCTTTCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPFGEFE*PGFQLN
Trigger: ATTCAGCTGAAAGCCAGGGCATTCGAACTCTCCGAA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGCAGTTCAAAGCCCTTaGTGGTGTTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPAVQSP*WCFQHQ
Trigger: CTGATGCTGAAAACACCAGCAAGGGCTTTGAACTGC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGATCCCAGGGTCATTaGAGGACGTTGCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGSQGH*RTLLWT
Trigger: TGTCCACAGCAACGTCCTGCAATGACCCTGGGATCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTCCGACTCCCATTCTaGGGGATCCCAGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLRLPF*GIPGSL
Trigger: CAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTCCAGTCACACTCCTTaGCTGGCGGGTAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSSHTP*LAGRVL
Trigger: CAGAACCCTACCCGCCAGGCAAGGAGTGTGACTGGA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACAACTTGGATCTGGATaGCAGCGCCTTCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGQLGSG*QRLRGP
Trigger: TGGTCCCCGAAGGCGCTGGCATCCAGATCCAAGTTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAAAGCCCACGGGCAGTaGTATTTTCCAGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCKAHGQ*YFPGAV
Trigger: GACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCAGACGCCGAGCCGTGGTaGTGTTTGCTGTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPDAEPW*CLLWPI
Trigger: GATGGGCCACAGCAAACAGCACCACGGCTCGGCGTC...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCAGCCTCCATCGGCCATaGTCCACGCTGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSLHRP*STLMLL
Trigger: CAGTAGCATCAGCGTGGAGCATGGCCGATGGAGGCT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGGCGGAAGCCAGCATTaGATTGGTACACCACACTGC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRGGSQH*IGTPHC
Trigger: GCAGTGTGGTGTACCAATGCAATGCTGGCTTCCGCC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGCTGTACCGCACCACTaGTCCCACAGTATAACTGTC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEAVPHH*SHSITV
Trigger: GACAGTTATACTGTGGGAGCAGTGGTGCGGTACAGC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTGACTGGCAAAACCTaGGTGGAGAGCCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLTGKT*VESPPA
Trigger: TGCTGGTGGGCTCTCCACGCAGGTTTTGCCAGTCAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGGCACTGGGCACTGTaGTCAGGGGAGCCTACTTCC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGHWAL*SGEPTS
Trigger: GGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCAGACAGCTGGTTTCTaGACGCTGACCGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRQTAGF*TLTGFL
Trigger: CAGAAACCCGGTCAGCGTGCAGAAACCAGCTGTCTG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTCCTTGCTGCCGCTGTaGAGATGGGCCGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKESLLPL*RWAVHQ
Trigger: CTGATGAACGGCCCATCTGCACAGCGGCAGCAAGGA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCTTGGGGTAATCCTTaGTGCCGCTGTGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEPWGNP*CRCADG
Trigger: CCCATCTGCACAGCGGCAGCAAGGATTACCCCAAGG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTCTCAAGGACCCTGCTaGTGCCCCCAGACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKESQGPC*CPQTWH
Trigger: ATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGTACTGGGGCAGGCTTaGTCCCCTGTTCTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEVLGQA*SPVLSR
Trigger: CCTTGAGAGAACAGGGGAGCAAGCCTGCCCCAGTAC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGACACACAGGTGTCTTaGCTGGCTTTCCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGDTQVS*LAFQTW
Trigger: CCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ACTGGAGGCTGGTGGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCTGCGTGGCCTCCTCCCTaGTCACTTACACACGCAGCC +
Preference number: 4 (lower is better)
Translates to: TGGWWCLQPYKLDSPFHPAWPPP*SLTHAA
Trigger: GGCTGCGTGTGTAAGTGAGCAGGGAGGAGGCCACGC...AGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGCCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTCTCAACTGTCCCATTaGGACCGTGCAGTTGGAACG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSQLSH*DRAVGT
Trigger: CGTTCCAACTGCACGGTCCCAATGGGACAGTTGAGA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGATTGGGGTAGCCATATaGGAACCCTGGGCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEIGVAI*EPWALN
Trigger: GTTGAGAGCCCAGGGTTCCCATATGGCTACCCCAAT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTGCAGTTGGCGTAATTaGGGTAGCCATATGGGAACC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPCSWRN*GSHMGT
Trigger: GGTTCCCATATGGCTACCCCAATTACGCCAACTGCA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGGTCCACGTGCAGTTaGCGTAATTGGGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCWSTCS*RNWGSH
Trigger: ATGGCTACCCCAATTACGCCAACTGCACGTGGACCA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGATTCTCTGGCTGGGGTaGACCATCAAACACCGACAG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGILWLG*TIKHRQ
Trigger: CTGTCGGTGTTTGATGGTCCACCCCAGCCAGAGAAT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGAGAACTTCATAGGTaGCGTGGAAGCCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGELHR*RGSLGH
Trigger: GTGCCCAAGGCTTCCACGCCACCTATGAAGTTCTCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCTGCTGGATGCCATTaGGCAGCCTCCCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPAGCH*AASLGS
Trigger: GGAACCCAGGGAGGCTGCCCAATGGCATCCAGCAGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCCTGCTGGATGCCATTaGGCAGCCTCCCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAPAGCH*AASLGS
Trigger: GGAACCCAGGGAGGCTGCCCAATGGCATCCAGCAGG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAAGGTTGAACCCTGCTaGATGCCATTGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGKVEPC*MPLGSL
Trigger: GAGGCTGCCCAATGGCATCCAGCAGGGTTCAACCTT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTTCTCAGAGCCAGCGTaGCAGGTGAGCACGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRFSEPA*QVSTAW
Trigger: CCACGCCGTGCTCACCTGCCACGCTGGCTCTGAGAA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGCTGATAACGGGGGCTaGGAGGCTGGCTCCGGTGAA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAADNGG*EAGSGE
Trigger: TTCACCGGAGCCAGCCTCCCAGCCCCCGTTATCAGC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAATCCGCGCTGCCGGTaGTTGCCATCCGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKENPRCR*LPSDVK
Trigger: CTTCACATCGGATGGCAACCACCGGCAGCGCGGATT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAATTTGCTTCTTGACTTaGTATTGGGCACTGAATCCG +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSICFLT*YWALNP
Trigger: CGGATTCAGTGCCCAATACCAAGTCAAGAAGCAAAT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGAGGGGCCTCGAAGGTaGGCATCACACATGCGGGCT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAEGPRR*ASHMRA
Trigger: AGCCCGCATGTGTGATGCCCACCTTCGAGGCCCCTC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGTCCTCTGGGTAGTTaGGAGACAGGACAACCCCAG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSPLGS*ETGQPQ
Trigger: CTGGGGTTGTCCTGTCTCCCAACTACCCAGAGGACT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCCTGGATCCAGACAGTaGTCTGACTGCAGTGTTATA +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPPGSRQ*SDCSVI
Trigger: TATAACACTGCAGTCAGACCACTGTCTGGATCCAGG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGCTCCACTGGAAGTTaGGCTCACACTCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGSTGS*AHTPEA
Trigger: AGCCTCTGGAGTGTGAGCCCAACTTCCAGTGGAGCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGACCCTGGCGACAAGATaGTCCCACTGGAGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRTLATR*SHWSLE
Trigger: TTCAAGGCTCCAGTGGGACCATCTTGTCGCCAGGGT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTGCAGTTCAAGTTGTTaGGGTAGAAGTCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPCSSSC*GRSQGT
Trigger: GGTTCCCTGACTTCTACCCCAACAACTTGAACTGCA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATGGCCACTTTCCAGGTaGAAGGTGTGGAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEWPLSR*KVWKVK
Trigger: CTTCACTTTCCACACCTTCCACCTGGAAAGTGGCCA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCTGGCTGGGTCTGGATaGAGTAGATGCATTCATGAT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPLAGSG*SRCIHD
Trigger: ATCATGAATGCATCTACTCCATCCAGACCCAGCCAG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACCCATCATCTCAGAATaGCTAAAAACTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSPIISE*LKTPSK
Trigger: TTTGCTGGGAGTTTTTAGCCATTCTGAGATGATGGG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTACTCGGCGACACAGGTaGGCAGAGGCCGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSTRRHR*AEAGPR
Trigger: CCTGGGACCGGCCTCTGCCCACCTGTGTCGCCGAGT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAACTCGGCGACACAGGTaGGCAGAGGCCGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTTRRHR*AEAGPR
Trigger: CCTGGGACCGGCCTCTGCCCACCTGTGTCGCCGAGT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATGCATGTTGGCGGGCTaGGCTGCCAGAAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGCMLAG*AARRTC
Trigger: ACAGGTTCTTCTGGCAGCCCAGCCCGCCAACATGCA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGCTTTCAATGCGGCCTaGGAGCTGGGAGCCATAGAA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGAFNAA*ELGAIE
Trigger: TTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGCAGATCTGTCCACTaGTGTAGTTCTGGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSRSVH*CSSGGS
Trigger: ACTACCCCCAGAACTACACCAGTGGACAGATCTGCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGTGATTCTCCTGTATaGGAGCCCGAGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSDSPV*EPEREL
Trigger: CAGCTCCCTCTCGGGCTCCCATACAGGAGAATCACT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACAGAGCTGCACTGCGTaGCGCTGGTTCGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPQSCTA*RWFEEP
Trigger: CGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTG...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCAGAGCTGCACTGCGTaGCGCTGGTTCGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAQSCTA*RWFEEP
Trigger: CGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTTGAGGTACGGCTCTaGGAAGCCAGGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGVEVRL*EARGQD
Trigger: ATCCTGTCCCCTGGCTTCCCAGAGCCGTACCTCAAC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCCCACATTGCACTCACCCTGGACGATAGCTCCTGGGAATGGCAGTCACAGCTGCTGACAACTTGGATCTaGATGCCAGCGCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SHIALTLDDSSWEWQSQLLTTWI*MPAPSG
Trigger: CCCCGAAGGCGCTGGCATCCAGATCCAAGTTGTCAG...CAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATCTTCACCCCGTTACTaGGCACAGCAGGTTCCGGAC +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSSPRY*AQQVPD
Trigger: GTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAGA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCATGTGGGCGTGGCCCTaGAGGGCATATCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETMWAWP*RAYPGS
Trigger: TGAGCCGGGATATGCCCTCCAGGGCCACGCCCACAT...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACAGGAGATGTGGGCGTaGCCCTGGAGGGCATATCCC +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPQEMWA*PWRAYP
Trigger: GGGATATGCCCTCCAGGGCCACGCCCACATCTCCTG...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCTGTGCAATACAGAGTaGAGGAGGGTAGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLCNTE*RRVVPS
Trigger: CGATGGAACTACCCTCCTCCACTCTGTATTGCACAG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCTATGTAGTCGTGGTTaGGCTCGGTGGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLCSRG*ARWRSS
Trigger: TGAACTTCTCCACCGAGCCCAACCACGACTACATAG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCACTTGGGCAGGGGGTaGTCCCAGTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRHLGRG*SQFRLV
Trigger: CACCAACCGGAACTGGGACCACCCCCTGCCCAAGTG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCCCACATTGCACTCACCCTGGACGATAGCTCCTGGGAATGGCAGTCACAGCTGAGCCAGACACAGTCCTaGGAGCTGGAGTACGGGCTA +
Preference number: 4 (lower is better)
Translates to: SHIALTLDDSSWEWQSQLSQTQS*ELEYGL
Trigger: TAGCCCGTACTCCAGCTCCCAGGACTGTGTCTGGCT...CAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGGTGCTGTTTGCTGTaGCCCATCCCAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCWCCLL*PIPDGD
Trigger: ATCACCATCTGGGATGGGCCACAGCAAACAGCACCA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCAGAAGACGCCGAGCCGTaGTGCTGTTTGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPEDAEP*CCLLWP
Trigger: GGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTC...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGAAGACGCCGAGCCGTaGTGCTGTTTGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAEDAEP*CCLLWP
Trigger: GGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAACTTGAGCAGGACCTaGTTGGATGAACTCTGCACT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPNLSRT*LDELCT
Trigger: AGTGCAGAGTTCATCCAACCAGGTCCTGCTCAAGTT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTATGGAGCCCCCGGGCTaGGTGCTGGTCTGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSMEPPG*VLVWPR
Trigger: CCTAGGCCAGACCAGCACCCAGCCCGGGGGCTCCAT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCACTGCAGCTGTACATaGCCTTGGTTCCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEHCSCT*PWFPLC
Trigger: ACACAGTGGGAACCAAGGCCATGTACAGCTGCAGTG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCGATGCGGTGGCCATTaGGGGGAATCGGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRRCGGH*GESGAL
Trigger: GAGAGCTCCCGATTCCCCCCAATGGCCACCGCATCG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTCCATGTCCGGTCCTTaGTGCAGCTCAGCACAGATA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSMSGP*CSSAQI
Trigger: TATCTGTGCTGAGCTGCACCAAGGACCGGACATGGA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGCAGGTCCTGGTGGTaGAGCCCTGAAGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGRSWW*SPEAGS
Trigger: GCTACCTGCTTCAGGGCTCCACCACCAGGACCTGCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTATGCGTTGGCGTCTCTaGCTGCCTGCAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAMRWRL*LPAVVG
Trigger: CCCCACCACTGCAGGCAGCCAGAGACGCCAACGCAT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATTGCTGTTGGCAACTTaGAAGCCAGTCACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPELLLAT*KPVTLS
Trigger: GCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGCTCCACGCCACTGTaGTCGATCATGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSSTPL*SIMVAL
Trigger: CAATGCCACCATGATCGACCACAGTGGCGTGGAGCT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAACTGCCCAAAGCCTTaGCCCTTGACAGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRNCPKP*PLTEPW
Trigger: CCAAGGCTCTGTCAAGGGCCAAGGCTTTGGGCAGTT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCAAAGTGGCGGCCAATaGACTCGGGGTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCQSGGQ*TRGLTP
Trigger: TGGAGTCAGACCCCGAGTCCATTGGCCGCCACTTTG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGTTGCGGTCGTACATTaGGTTCTCAAATGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCVAVVH*VLKCGP
Trigger: CGGGCCACATTTGAGAACCCAATGTACGACCGCAAC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTCATCAGCAGACAGCTaGTTTCTGCACGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSSADS*FLHADR
Trigger: CCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGATGA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTGCCGCTGTGCAGATaGGCCGTTCATCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELPLCR*AVHQQT
Trigger: TGTCTGCTGATGAACGGCCCATCTGCACAGCGGCAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATTGACCTTGGGCTCCTaGCCAGACTCCTGCCCTATC +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLTLGS*PDSCPI
Trigger: GATAGGGCAGGAGTCTGGCCAGGAGCCCAAGGTCAA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTGGGGCAGACTGATCTaGGTTTGCATTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPWGRLI*VCILTP
Trigger: TGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATGGGGCAGACTGATCTaGGTTTGCATTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEWGRLI*VCILTP
Trigger: TGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACACAGGTGTCTTGCCTaGCTTTCCAGACCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGHRCLA*LSRPGH
Trigger: GTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTGTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCAAGCCTCTGGAGGTaGAGAGAAATGTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPSLWR*REMSGV
Trigger: CACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCCCTTCCAAGCCTCTaGAGGTGGAGAGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSLPSL*RWREMS
Trigger: TGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCATGGTGATGGGTATATaGCGTAGATGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPMVMGI*RRWWVK
Trigger: CTTCACCCACCATCTACGCCATATACCCATCACCAT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCTAGGTCCCTTCCACCCTGCTaGATTAGATGGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: AVVTTCKVPRDGAPGLARSLPPC*IRWCQG
Trigger: CCCCTGACACCATCTAATCCAGCAGGGTGGAAGGGA...CCTAGCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACCTGGACGATAGCTCCTaGGAATGGCAGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHLDDSS*EWQSQL
Trigger: CAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAG...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCCTTGTCACCGAGGTTaGAGGTTGAACCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCPCHRG*RLNPAG
Trigger: TCCAGCAGGGTTCAACCTTCAACCTCGGTGACAAGG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACCTTGTCACCGAGGTTaGAGGTTGAACCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGPCHRG*RLNPAG
Trigger: TCCAGCAGGGTTCAACCTTCAACCTCGGTGACAAGG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAGCCTTCTGTCCCAGTaGCTTCCAGAAAGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSLLSQ*LPESRN
Trigger: GTTACGACTTTCTGGAAGTCACTGGGACAGAAGGCT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCGCTGGATCCTAACCTaGAATCCGAGCCTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCRWILT*NPSLVF
Trigger: AAAGACTAGGCTCGGATTTCAGGTTAGGATCCAGCG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCTGGGCGAAGTCAGGTaGCCACCACAGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLALGEVR*PPQGAS
Trigger: TGAAGCTCCCTGTGGTGGTCACCTGACTTCGCCCAG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAAGCCGATGTCCGAGTaGCTCTTGTCGGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGKPMSE*LLSVEK
Trigger: CTTCTCTACCGACAAGAGTCACTCGGACATCGGCTT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAACACACCCTTGCCATaGGATGTTTCGATAATCCAG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPNTPLP*DVSIIQ
Trigger: CTGGATTATCGAAACATCTCATGGCAAGGGTGTGTT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCGCCCTGGCTTTCAGCTaGATTCCCTTCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETALAFS*IPFPGW
Trigger: CCAGCCAGGGAAGGGAATTCAGCTGAAAGCCAGGGC...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATGCCATCATAAACCTTaGGGACATCTCCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPECHHKP*GHLLRR
Trigger: TCTCCGAAGGAGATGTCCTCAAGGTTTATGATGGCA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCCGTGGCAGTAGTAGGTaGCGGAGGAGCCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETRGSSR*RRSPAS
Trigger: TGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACG...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCGGTGGCCAAGGGCAGTaGTTCTCCTGTATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETGGQGQ*FSCMGA
Trigger: GGCTCCCATACAGGAGAATCACTGCCCTTGGCCACC...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGAAGCTCGCTTCCACTaGATCTTCCCATCATGCGGC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCEARFH*IFPSCG
Trigger: GCCGCATGATGGGAAGATTCAGTGGAAGCGAGCTTC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCCTGATACTCCAGCTTaGATCCTGGCCGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCPDTPA*ILADSG
Trigger: CCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGCACTCGAAGGTCACTaGTTGTCCCACGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCALEGH*LSHVVA
Trigger: GGCTACAACGTGGGACAATCAGTGACCTTCGAGTGC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGTGCCATGTTGACACGTaGGGACAGGGTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: ISGATGVPNERGMGTEQMCHVDT*GQGGQS
Trigger: TGACTGGCCACCCTGTCCTCACGTGTCAACATGGCA...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCGGTTGGTGCCATGTTaGCACGTGAGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRRLVPC*HVRTGW
Trigger: CCACCCTGTCCTCACGTGTCAACATGGCACCAACCG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTGGCCATGCTCCGGGTaGAGACGCCGAGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMWPCSG*RRRAVV
Trigger: CACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCAGGACCTGGTTGGATaGACTCTGCACTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPQDLVG*TLHCFL
Trigger: AAGAAAACAGTGCAGAGTTCATCCAACCAGGTCCTG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCATCACGGTGGAACTTaGGCAGGACCTGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCHHGGT*AGPGWM
Trigger: CATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCCACAGGAAAGAGCTTaGCAGAGAGGGATGGCTTCG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCPQERA*QRGMAS
Trigger: CGAAGCCATCCCTCTCTGTCAAGCTCTTTCCTGTGG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGCTGGGCCTGGAACTaGTACTGTGTCTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSWAWN*YCVSKI
Trigger: TATCTTTGAGACACAGTATCAGTTCCAGGCCCAGCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCGATCATGGTGGCATTaGCCTTGCTGTTGGCAACTT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGRSWWH*PCCWQL
Trigger: AAGTTGCCAACAGCAAGGTCAATGCCACCATGATCG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCCATAGGACGTGAATaGAGGAGAGGTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSIGRE*RRGVCV
Trigger: AACACACACACCTCTCCTTCATTCACGTCCTATGGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATCCATAGGACGTGAATaGAGGAGAGGTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESIGRE*RRGVCV
Trigger: AACACACACACCTCTCCTTCATTCACGTCCTATGGA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGCACTCTGACCGCATaGTGGGATGTGTCCTACTGT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGCTLTA*WDVSYC
Trigger: ACAGTAGGACACATCCCATCATGCGGTCAGAGTGCA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCAGCTGGATTCTGTGCTaGTCTTCCGCGGTGATGGTC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSWILC*SSAVMV
Trigger: GACCATCACCGCGGAAGAGCAGCACAGAATCCAGCT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTGCCCCTTTCGGGTATaGCAGGGTCTGGACACATAT +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRCPFRV*QGLDTY
Trigger: ATATGTGTCCAGACCCTGGCATACCCGAAAGGGGCA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACCAGGGAACTGCCACTaGCATCAGTCTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGPGNCH*HQSGRG
Trigger: TCCTCTTCCAGACTGATGGCAGTGGCAGTTCCCTGG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCACAGTGGAGGTGGTTaGCATAGTCCTCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGHSGGG*HSPLGS
Trigger: ACTACCCAGAGGACTATGGCAACCACCTCCACTGTG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGTCCCCAAACCGTTTaGCATTTACTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAECPQTV*HLLERQ
Trigger: CTGGCGTTCCAGTAAATGGCAAACGGTTTGGGGACA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTGTTCCAGACCACGCTaGCCTCCTTCAGGACGCAGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRCSRPR*PPSGRR
Trigger: CCTGCGTCCTGAAGGAGGGCAGCGTGGTCTGGAACA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGACACGGAGCTCCCTaGAAAATGACCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGHGAP*KMTFIM
Trigger: CATGATGAAGGTCATTTTGCAGGGAGCTCCGTGTCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGTGCAGCCGGCCTCTaGTTCGATGGTCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGAAGL*FDGPDA
Trigger: TGCATCTGGACCATCGAAGCAGAGGCCGGCTGCACC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAAGAGGCTGTTGCTaGTGCTTTCAATGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCGRGCC*CFQCGL
Trigger: CAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAGCATTGCTCACAGATaGATCGCTGCGGAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSIAHR*IAAEGE
Trigger: CTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGAAGCCTCTGGCTGGTaGGAGGCCTTTGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMREASGW*EAFGAE
Trigger: TTCAGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCAGAAGCCTCTGGCTGGTaGGAGGCCTTTGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPEASGW*EAFGAE
Trigger: TTCAGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTC...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAGAGCTGGTTGGAGGTaGTGTTCAGAAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKERAGWR*CSEGQA
Trigger: TGCCTGCCCTTCTGAACAGCACCTCCAACCAGCTCT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCAGGTTCCGGACAACTaGTCAGGCCCACCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEQVPDN*SGPPFC
Trigger: ACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTGTGTCCAGACACTCTaGAGTGGCCTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLACVQTL*SGLSAC
Trigger: GCAGGCGCTGAGGCCACTGCAGAGTGTCTGGACACA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCAGAGCCCATTGGCCATaGACTCACGCACCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRRAHWP*THAPWS
Trigger: GCTCCAGGGTGCGTGAGTGCATGGCCAATGGGCTCT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGATTGGTACACCACACTaGCCCGGTAGCTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGIGTPH*PGSCSS
Trigger: AGAACTACAGCTACCGGGGCAGTGTGGTGTACCAAT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCACAGAAAGGGGTCTTaGCCGACCAGTGATGATCCT +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRHRKGS*PTSDDP
Trigger: AGGATCATCACTGGTCGGGCAAGACCCCTTTCTGTG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGATGTCCGGTCCTTGGTaGAGCTCAGCACAGATACTC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRMSGPW*SSAQIL
Trigger: GAGTATCTGTGCTGAGCTGCACCAAGGACCGGACAT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAACGGAAGAGGACTGTaGTTCCAACCTGGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGNGRGL*FQPGSP
Trigger: AGGGCTACCAGGTTGGAAGCACAGTCCTCTTCCGTT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGCAGATGGGCGGCTTaGCTGTCCAGCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGRWAA*LSSCHP
Trigger: CGGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCTGAGCATGGCTGGCTaGTTCTTCCCCTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRLSMAG*FFPWYS
Trigger: TGAATACCAGGGGAAGAAGCAGCCAGCCATGCTCAG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCTGTGGGCTGGATGTTaGGGTCGTACATTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGLWAGC*GRTLGS
Trigger: AGAACCCAATGTACGACCGCAACATCCAGCCCACAG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCAAGGACCCTGCTGCTaGCCCCAGACTTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRQGPCC*PQTWHP
Trigger: AGGATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGGGAGTTGAATCCTTaGCCCGAAGCTGCCTACGCG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGELNP*PEAAYA
Trigger: CGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTTGGGACCGTGCAGTTaGAACGTGCAGTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLGPCS*NVQFWP
Trigger: TGGCCAGAACTGCACGTTCCAACTGCACGGTCCCAA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGTCCACGTGCAGTTaGCGTAATTGGGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGWSTCS*RNWGSH
Trigger: ATGGCTACCCCAATTACGCCAACTGCACGTGGACCA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGAGAACTTCATAGGTaGCGTGGAAGCCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGELHR*RGSLGH
Trigger: GTGCCCAAGGCTTCCACGCCACCTATGAAGTTCTCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTTCTTGACTTGGTATTaGGCACTGAATCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGFLTWY*ALNPRC
Trigger: GCAGCGCGGATTCAGTGCCCAATACCAAGTCAAGAA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCGGCAGACTGGCCTGTaGTCGCTCCAGGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLRQTGL*SLQAAN
Trigger: GTTTGCGGCCTGGAGCGACCACAGGCCAGTCTGCCG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCAGCTCAAAGGCGGGCTaGCACTCAAACTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: CSCCYNLQGSQGRGPWISSSKAG*HSNLSV
Trigger: CACACTCAAGTTTGAGTGCCAGCCCGCCTTTGAGCT...GCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTCGTTGAAGGCCAGGTaGATGCGGCTCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRSLKAR*MRLSGL
Trigger: CAGGCCTGAGAGCCGCATCCACCTGGCCTTCAACGA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTCGAGACGGGCCACGTaGCCACTGCTTGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASRRAT*PLLVME
Trigger: CTCCATCACAAGCAGTGGCCACGTGGCCCGTCTCGA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGTGGAGTGGTCAGTCTaGAACTCGAGACGGGCCACG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAVEWSV*NSRRAT
Trigger: CGTGGCCCGTCTCGAGTTCCAGACTGACCACTCCAC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTTTGATGGGGTAGCCTaGCTGGGCCTCAATCACCCA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEFDGVA*LGLNHP
Trigger: TGGGTGATTGAGGCCCAGCCAGGCTACCCCATCAAA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCACGCTGTCCATTTACTaGGATTCCTGGATCCAGACA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPTLSIY*DSWIQT
Trigger: TGTCTGGATCCAGGAATCCCAGTAAATGGACAGCGT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGAAGTCAGGGAACCCTaGCGACAAGATGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEEVREP*RQDGPT
Trigger: AGTGGGACCATCTTGTCGCCAGGGTTCCCTGACTTC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGAAGTCAGGGAACCCTaGCGACAAGATGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCEVREP*RQDGPT
Trigger: AGTGGGACCATCTTGTCGCCAGGGTTCCCTGACTTC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGGCCACTTTCCAGGTaGAAGGTGTGGAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEWPLSR*KVWKVK
Trigger: CTTCACTTTCCACACCTTCCACCTGGAAAGTGGCCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCACACTGAAAATTGAATaGCAAAGCCCTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPTLKIE*QSPACW
Trigger: CCAGCAAGCAGGGCTTTGCCATTCAATTTTCAGTGT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCATGCACTGCGTGGCGCTaGTTCGAGGAACCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPCTAWR*FEEPLG
Trigger: ACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCA...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTGCACTGCGTGGCGCTaGTTCGAGGAACCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRCTAWR*FEEPLG
Trigger: ACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCACAAAACTGACAACTTaGATCTGGATGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPTKLTT*IWMPAP
Trigger: AGGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAGAAACTCCCCAGCATaGTTACAGTGTTATCTGCAC +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPRNSPA*LQCYLH
Trigger: GTGCAGATAACACTGTAACCATGCTGGGGAGTTTCT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACGAAGGTAGAGCTGGTTaGAGGTGCTGTTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHEGRAG*RCCSEG
Trigger: CCCTTCTGAACAGCACCTCCAACCAGCTCTACCTTC...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGAAGGTAGAGCTGGTTaGAGGTGCTGTTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGEGRAG*RCCSEG
Trigger: CCCTTCTGAACAGCACCTCCAACCAGCTCTACCTTC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCTGTGCAATACAGAGTaGAGGAGGGTAGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGLCNTE*RRVVPS
Trigger: CGATGGAACTACCCTCCTCCACTCTGTATTGCACAG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTTCCCATCATGCGGCTaGTCTCATAGGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEFPSCG*SHRGHS
Trigger: GGAATGGCCCCTATGAGACCAGCCGCATGATGGGAA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATTCCCATCATGCGGCTaGTCTCATAGGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGFPSCG*SHRGHS
Trigger: GGAATGGCCCCTATGAGACCAGCCGCATGATGGGAA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGAGAGGAGGGAGCTTaGAAGCTCGCTTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGEEGA*KLASTE
Trigger: TTCAGTGGAAGCGAGCTTCCAAGCTCCCTCCTCTCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGTGGAAATACACGGTaGTCTCGTGGGACGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGCGNTR*SRGTWR
Trigger: TCTCCACGTCCCACGAGACCACCGTGTATTTCCACA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCGGGAGGAGTTGAGTTaGTTCTTTCCAACTCCGAGA +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGREELS*FFPTPR
Trigger: TCTCGGAGTTGGAAAGAACCAACTCAACTCCTCCCG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS-3UTR CCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCTTGAGGCGGACGCCATaGCCAATGGGCACGGTGATC +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETLRRTP*PMGTVI
Trigger: GATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAA...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTGGTGCTGTTTGCTGTaGCCCATCCCAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRWCCLL*PIPDGD
Trigger: ATCACCATCTGGGATGGGCCACAGCAAACAGCACCA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAACTTGAGCAGGACCTaGTTGGATGAACTCTGCACT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPENLSRT*LDELCT
Trigger: AGTGCAGAGTTCATCCAACCAGGTCCTGCTCAAGTT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAGGGCATTTGGTGAGTaGATAAGCGGAGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPRAFGE*ISGESY
Trigger: ATAGCTTTCTCCGCTTATCCACTCACCAAATGCCCT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTTCACATATCGGGGGTaGTCCTTCAAACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPFTYRG*SFKLQV
Trigger: TACCTGCAGTTTGAAGGACCACCCCCGATATGTGAA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACAGAAGCTCATTTGTTaGACAGTGCACTTCACATAT +
Preference number: 4 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSQKLIC*TVHFTY
Trigger: ATATGTGAAGTGCACTGTCCAACAAATGAGCTTCTG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGCGTTGCAGCCAAAGTaGATGGAGCCCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSALQPK*MEPPGW
Trigger: CCAGCCCGGGGGCTCCATCCACTTTGGCTGCAACGC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGCGTTGCAGCCAAAGTaGATGGAGCCCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLALQPK*MEPPGW
Trigger: CCAGCCCGGGGGCTCCATCCACTTTGGCTGCAACGC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGTGCCGGGTACAGATaGCCATGCTGTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGAGYR*PCCVPP
Trigger: TGGTGGGACACAGCATGGCCATCTGTACCCGGCACC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAATTGCAGGAGAAGATaGCTGTTGCCCCGTAGACAG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAENCRRR*LLPRRQ
Trigger: CTGTCTACGGGGCAACAGCCATCTTCTCCTGCAATT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAACTCGGGCATTACTTaGAGTCCCAGGGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGNSGIT*SPRVPT
Trigger: TGTGGGAACCCTGGGACTCCAAGTAATGCCCGAGTT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCCAGCCGAAGGCCATTaGCTGGAATCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAPAEGH*LESQGH
Trigger: GTGACCCTGGGATTCCAGCCAATGGCCTTCGGCTGG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCTTTGCAGACGGGCTTaGTTCCATTCCATGTCCGGT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGLCRRA*FHSMSG
Trigger: ACCGGACATGGAATGGAACCAAGCCCGTCTGCAAAG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGGGATGAGCGGAGGTaGCTTGCACATGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCGDERR*LAHESF
Trigger: AAAGCTCTCATGTGCAAGCCACCTCCGCTCATCCCC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGCGGGCAGGGAGAGCTaGTACCCCTCCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMAGRES*YPSRQA
Trigger: TGCCTGCCTGGAGGGGTACCAGCTCTCCCTGCCCGC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTGTATCCCAAACTGTaGCACACCAGGGTCCGCACA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLYPKL*HTRVRT
Trigger: TGTGCGGACCCTGGTGTGCCACAGTTTGGGATACAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGGGACACAGTCAGGTaGGGTTCCACTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGDTVR*GSTPGQ
Trigger: CTGACCTGGAGTGGAACCCCACCTGACTGTGTCCCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAACTGCCCAAAGCCTTaGCCCTTGACAGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKENCPKP*PLTEPW
Trigger: CCAAGGCTCTGTCAAGGGCCAAGGCTTTGGGCAGTT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAATGATGTCTGTGGGCTaGATGTTGCGGTCGTACATT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEMMSVG*MLRSYI
Trigger: AATGTACGACCGCAACATCCAGCCCACAGACATCAT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCTCTCCAGGGTAACTaGCATAGATGGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPLQGN*HRWRQG
Trigger: GCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATGCCAGGTCTTTTGCTaGCTATGGTCAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGCQVFC*LWSAAA
Trigger: AGCAGCCGCTGACCATAGCCAGCAAAAGACCTGGCA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCACTCGCAAGGAGCTaGAGAGGTGTGACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEPLARS*RGVTFS
Trigger: GCTGAAAGTCACACCTCTCCAGCTCCTTGCGAGTGG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCTCCATTGTGTCTGCTaGAAATGGACGCCTCTCACT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELHCVC*KWTPLT
Trigger: AGTGAGAGGCGTCCATTTCCAGCAGACACAATGGAG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCCAAGCCTCTGGAGGTaGAGAGAAATGTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCPSLWR*REMSGV
Trigger: CACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGATATGGCGTAGATGGTaGGTGAAGGGCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRIWRRW*VKGLIC
Trigger: GCAGATGAGGCCCTTCACCCACCATCTACGCCATAT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAATGGTGATGGGTATATaGCGTAGATGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEMVMGI*RRWWVK
Trigger: CTTCACCCACCATCTACGCCATATACCCATCACCAT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGGAAATGTCTGGGTCTGAGCCTGGTGGGCTTTGTCCCAGTGGTGTCTCCTTGGCATTGTATGTTCCCTaGGTCTCCTCCCGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: QEMSGSEPGGLCPSGVSLALYVP*VSSRLG
Trigger: TCCAAGGCGGGAGGAGACCCAGGGAACATACAATGC...CAAGGAGACACCACTGGGACAAAGCCCACCAGGCTCAGACCCAGACATTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCTTGGGTGGTGGCTTTaGACTTGCCATCTAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLGWWL*TCHLGP
Trigger: CGGCCCTAGATGGCAAGTTCAAAGCCACCACCCAAG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGTTGCCATCCGATGTaGAGTGCAGTCGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGCHPM*SAVAAS
Trigger: ACTGGCTGCGACTGCACTTCACATCGGATGGCAACC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCAGCCCTCGTTGCAGGTaGACTGGACGCTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRSPRCR*TGRWIL
Trigger: TAGGATCCAGCGTCCAGTTCACCTGCAACGAGGGCT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTCACTTTCATACAGGTaGTCCGCTTGGACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSLSYR*SAWTLA
Trigger: TGCAAGGGTCCAAGCGGATCACCTGTATGAAAGTGA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCCCCAAATGTCAGGAGCACTTGTTCTCAGTGCTACAGTCGACATTCCTGCCAGTTCTGGTCCCCATCCTaGCCACCATCACCGACCGTC +
Preference number: 4 (lower is better)
Translates to: SPNVRSTCSQCYSRHSCQFWSPS*PPSPTV
Trigger: GACGGTCGGTGATGGTGGTCAGGATGGGGACCAGAA...CTGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTGACATTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTACCCTGAGTGCCTGTaGCTGAATTCCCACACTCAG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEYPECL*LNSHTQ
Trigger: CTGAGTGTGGGAATTCAGTCACAGGCACTCAGGGTA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATACCCTGAGTGCCTGTaGCTGAATTCCCACACTCAG +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGYPECL*LNSHTQ
Trigger: CTGAGTGTGGGAATTCAGTCACAGGCACTCAGGGTA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTACCCTGAGTGCCTGTaGCTGAATTCCCACACTCAG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCYPECL*LNSHTQ
Trigger: CTGAGTGTGGGAATTCAGTCACAGGCACTCAGGGTA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGCCATCATAAACCTTaGGGACATCTCCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAECHHKP*GHLLRR
Trigger: TCTCCGAAGGAGATGTCCTCAAGGTTTATGATGGCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGGTCCAGATGCAGTTaGGATTGTGTTCATAGGGAG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCWSRCS*DCVHRE
Trigger: CTCCCTATGAACACAATCTCAACTGCATCTGGACCA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGTGGACACTGAAAATTaGATGGCAAAGCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCVDTEN*MAKPCL
Trigger: CAAGCAGGGCTTTGCCATTCAATTTTCAGTGTCCAC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTGGCTGTGGCCGTCGTaGACCTCCACCACGTCGTTG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSWLWPS*TSTTSL
Trigger: CAACGACGTGGTGGAGGTTCACGACGGCCACAGCCA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGAGGCACGGTTGTTCCTaGGAAACTCCCCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: ISGATGVPNERGMGTEQMRHGCS*ETPQHG
Trigger: ACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCT...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGGGTGGCCAGTCAATTaGTACCCCGGGAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSGWPVN*YPGRHS
Trigger: CGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTTGGCCATGCTCCGGGTaGAGACGCCGAGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTWPCSG*RRRAVV
Trigger: CACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCA...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGCATCACGGTGGAACTTaGGCAGGACCTGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: ISGATGVPNERGMGTEQMHHGGT*AGPGWM
Trigger: CATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATG...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTGAGTAATTCCCACTaGGGGCTTTCAGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLSNSH*GLSAED
Trigger: GTCCTCTGCTGAAAGCCCTCAGTGGGAATTACTCAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGTACACAGAGTTGCTTaGGCTGGTGACAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEVHRVA*AGDNQG
Trigger: CCCCTGATTGTCACCAGCTCAAGCAACTCTGTGTAC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGTACACAGAGTTGCTTaGGCTGGTGACAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCVHRVA*AGDNQG
Trigger: CCCCTGATTGTCACCAGCTCAAGCAACTCTGTGTAC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATTGACAGGTGCGCTCTaGCGATCCCCGGAGCACGTG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLTGAL*RSPEHV
Trigger: CACGTGCTCCGGGGATCGTCAGAGCGCACCTGTCAA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCGAGCAGTGACGGCTaGGCAGGCCTGTGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPSSDG*AGLWRS
Trigger: ACTACGCCACAGGCCTGCTCAGCCGTCACTGCTCGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACACAGATACTCTATGTaGCTCCATCATATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPEHRYSM*LHHIAR
Trigger: CCTGGCTATATGATGGAGTCACATAGAGTATCTGTG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGGCATAAGTCACACTTaGGCCCCACATGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRGISHT*APHEVR
Trigger: TCTGACTTCATGTGGGGCTCAAGTGTGACTTATGCC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCAACACAGGGAAACACTaGGGCAGCTCTCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRNTGKH*GSSPVQ
Trigger: CTGGACCGGAGAGCTGCCTCAGTGTTTCCCTGTGTT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAACACAGGGAAACACTaGGGCAGCTCTCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLANTGKH*GSSPVQ
Trigger: CTGGACCGGAGAGCTGCCTCAGTGTTTCCCTGTGTT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTGAGGTCCAGTCTTTaGAAGCCGAACTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLRSSL*KPNCPK
Trigger: CTTTGGGCAGTTCGGCTTTCAAAGACTGGACCTCAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTGAGGTCCAGTCTTTaGAAGCCGAACTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELRSSL*KPNCPK
Trigger: CTTTGGGCAGTTCGGCTTTCAAAGACTGGACCTCAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGTGGGGAACAGGGCATaGAGCATCCTTCATGCGCAC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRVGNRA*SILHAH
Trigger: GTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCAC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGCGTAGATGGTGGGTaGAGGGCCTCATCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGVDGG*RASSAL
Trigger: CAGGGCAGATGAGGCCCTTCACCCACCATCTACGCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTTGAACCCTGCTGGATaGCATTGGGCAGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLALNPAG*HWAASL
Trigger: CAGGGAGGCTGCCCAATGGCATCCAGCAGGGTTCAA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTTGAAGGTTGAACCCTaGTGGATGCCATTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELKVEP*WMPLGS
Trigger: GCTGCCCAATGGCATCCAGCAGGGTTCAACCTTCAA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCAGGATGGTCCATGTaGAGTCGGCATTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPGWSM*SRHCYG
Trigger: ACCATAACAATGCCGACTGCACATGGACCATCCTGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCTTGGAGGGGTTGAGTaGTGTGATGATCCACACACA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGLGGVE*CDDPHT
Trigger: TGTGTGTGGATCATCACAGCACTCAACCCCTCCAAG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACACAGTGGAGGTGGTTaGCATAGTCCTCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGHSGGG*HSPLGS
Trigger: ACTACCCAGAGGACTATGGCAACCACCTCCACTGTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGAAGGAGATGGAGCTaGCCAGCTGGAGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGRRWS*PAGGCP
Trigger: GGGACAGCCTCCAGCTGGGCAGCTCCATCTCCTTCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCGAGATCCAGTTAGCTaGCTCAGGGGCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLARDPVS*LRGWVK
Trigger: CTTCACCCAGCCCCTGAGGCAGCTAACTGGATCTCG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGCAAGCCCTTCCGGATaGTGTAGGCTGGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTASPSG*CRLGPR
Trigger: CCGAGGTCCCAGCCTACAGCATCCGGAAGGGCTTGC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGCAAGCCCTTCCGGATaGTGTAGGCTGGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLASPSG*CRLGPR
Trigger: CCGAGGTCCCAGCCTACAGCATCCGGAAGGGCTTGC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTCCAGTCACACTCCTTaGCTGGCGGGTAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRSSHTP*LAGRVL
Trigger: CAGAACCCTACCCGCCAGGCAAGGAGTGTGACTGGA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCTCCAGTCACACTCCTTaGCTGGCGGGTAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETSSHTP*LAGRVL
Trigger: CAGAACCCTACCCGCCAGGCAAGGAGTGTGACTGGA...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTCCAGTCACACTCCTTaGCTGGCGGGTAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASSHTP*LAGRVL
Trigger: CAGAACCCTACCCGCCAGGCAAGGAGTGTGACTGGA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATACTGCAGCAGATACTGCGGAGGCTGGGTTCTGTTTCCAGTTCTATCCACATGCACTGCCCAGCCTCTTaGCATAGCGGGGTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: ILQQILRRLGSVSSSIHMHCPAS*HSGVPA
Trigger: TGCCGGAACCCCGCTATGGCAAGAGGCTGGGCAGTG...CATGTGGATAGAACTGGAAACAGAACCCAGCCTCCGCAGTATCTGCTGCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACCACCGAGAAGTCACTaGCCAGCCTCTTGCCATAGC +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPPPRSH*PASCHS
Trigger: GCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGG...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCAGGGCATAGCCGGAGTTaGATTCGAAGCGGACGATGG +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPGHSRS*IRSGRW
Trigger: CCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCC...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGGCATAGCCGGAGTTaGATTCGAAGCGGACGATGG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGHSRS*IRSGRW
Trigger: CCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACAACTTGGATCTGGATaGCAGCGCCTTCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPQLGSG*QRLRGP
Trigger: TGGTCCCCGAAGGCGCTGGCATCCAGATCCAAGTTG...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAGCCGTGGTGCTGTTTaGTGTGGCCCATCCCAGATG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASRGAV*CGPSQM
Trigger: CATCTGGGATGGGCCACAGCAAACAGCACCACGGCT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGGCAGAAGGAGCATTGTGCCCTTAGGCAAGCACTCTCAATGAAAGACCTTGCTGACGCCGAGCCGTGGTaGTGTTTGCTGTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: RQKEHCALRQALSMKDLADAEPW*CLLWPI
Trigger: GATGGGCCACAGCAAACAGCACCACGGCTCGGCGTC...AGCAAGGTCTTTCATTGAGAGTGCTTGCCTAAGGGCACAATGCTCCTTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGACGCCGAGCCGTGGTaGTGTTTGCTGTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSDAEPW*CLLWPI
Trigger: GATGGGCCACAGCAAACAGCACCACGGCTCGGCGTC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGACGCCGAGCCGTGGTaGTGTTTGCTGTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLDAEPW*CLLWPI
Trigger: GATGGGCCACAGCAAACAGCACCACGGCTCGGCGTC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGGCGGTAGCCGGCGTTaGAGCCAAAGTGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSGGSRR*SQSGWS
Trigger: GCTCCATCCACTTTGGCTGCAACGCCGGCTACCGCC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACACAGAAAGGGGTCTTaGCCGACCAGTGATGATCCT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGHRKGS*PTSDDP
Trigger: AGGATCATCACTGGTCGGGCAAGACCCCTTTCTGTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGAGTACGCTTGCCGATaGAGCTGTACCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMREYACR*SCTAPL
Trigger: CAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGCCCACACATGCGGGTaGTGTTTCCCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAAHTCG*CFPPEY
Trigger: GTACTCTGGTGGGAAACAGCACCCGCATGTGTGGGC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCATTGGCTTGACAGGTaGGCTCTGACGATCCCCGGA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAHWLDR*ALTIPG
Trigger: TCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTACTCCACACTCAGGCTaGGAGCCGCTCCACGAGCCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSTPHSG*EPLHEP
Trigger: TGGCTCGTGGAGCGGCTCGCAGCCTGAGTGTGGAGT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCTGACTGGCAAAACCTaGGTGGAGAGCCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLTGKT*VESPPA
Trigger: TGCTGGTGGGCTCTCCACGCAGGTTTTGCCAGTCAG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGCCTTGCAGGTGCGGTaGTCGGAGCCACCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMALQVR*SEPPLR
Trigger: CCTCAAGGGTGGCTCCGAGCACCGCACCTGCAAGGC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCATCCGCCTTGCAGGTaGGGTGCTCGGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFHPPCR*GARSHP
Trigger: AGGGTGGCTCCGAGCACCGCACCTGCAAGGCGGATG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGCAGATGGGCGGCTTaGCTGTCCAGCTGCCATCCG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGRWAA*LSSCHP
Trigger: CGGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGCCGGGTGGCTATACTaGTGTGCACACTGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRAGWLY*CAHCAD
Trigger: GTCAGCACAGTGTGCACAGCAGTATAGCCACCCGGC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACTGTCCCTCCGCTCCTaGACATTTCTATTTGCTATT +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPELSLRS*TFLFAI
Trigger: AATAGCAAATAGAAATGTGCAGGAGCGGAGGGACAG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACTACTGCAGCAGATACTaGGGAGGCTGGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHYCSRY*GGWVLF
Trigger: AAACAGAACCCAGCCTCCGCAGTATCTGCTGCAGTA...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACTACTGTAGCAGATACTaGAGCAGATACTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHYCSRY*SRYCGG
Trigger: GCCTCCGCAGTATCTGCTGCAGTATCTGCTACAGTA...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGATTGGGGTAGCCATATaGGAACCCTGGGCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEIGVAI*EPWALN
Trigger: GTTGAGAGCCCAGGGTTCCCATATGGCTACCCCAAT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCGTACGCAGATTCTCTaGCTGGGGTGGACCATCAAA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKERTQIL*LGWTIK
Trigger: TTTGATGGTCCACCCCAGCCAGAGAATCTGCGTACG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATCCCACATGTGTGGCTaGGGAGAACTTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSHMCG*GELHRW
Trigger: CCACCTATGAAGTTCTCCCCAGCCACACATGTGGGA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCATTGGGCAGCCTCCCTaGGTTCCCACATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRIGQPP*VPTCVA
Trigger: AGCCACACATGTGGGAACCCAGGGAGGCTGCCCAAT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCAGTCGGCATTGTTATaGTACTCCGAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEQSALL*YSEGKW
Trigger: CCACTTCCCCTCGGAGTACCATAACAATGCCGACTG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGCTGTTGTCTTTGCTaGGCATCAGCTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGCCLC*ASASHL
Trigger: GAGGTGTGAAGCTGATGCCCAGCAAAGACAACAGCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATCGTTGCAGGTGAACTaGACGCTGGATCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSLQVN*TLDPNL
Trigger: CAGGTTAGGATCCAGCGTCCAGTTCACCTGCAACGA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCGGCAGACTGGCCTGTaGTCGCTCCAGGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMRQTGL*SLQAAN
Trigger: GTTTGCGGCCTGGAGCGACCACAGGCCAGTCTGCCG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCCCCAAATGTCAGGAGCACTTGTTCTCAGTGCTACAGTCGACATTCCTGCCAGAGGGGCCTCGAAGGTaGGCATCACACATGCGGGCT +
Preference number: 4 (lower is better)
Translates to: IPKCQEHLFSVLQSTFLPEGPRR*ASHMRA
Trigger: AGCCCGCATGTGTGATGCCCACCTTCGAGGCCCCTC...TGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTGACATTTGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAGCTCAAAGGCGGGCTaGCACTCAAACTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSSKAG*HSNLSV
Trigger: CACACTCAAGTTTGAGTGCCAGCCCGCCTTTGAGCT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGTTGCCATAGTCCTCTaGGTAGTTGGGAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEVAIVL*VVGRQD
Trigger: GTCCTGTCTCCCAACTACCCAGAGGACTATGGCAAC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGCTCCACTGGAAGTTaGGCTCACACTCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGSTGS*AHTPEA
Trigger: AGCCTCTGGAGTGTGAGCCCAACTTCCAGTGGAGCC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCTCAGCAACACACCTTaGCAGAGGCGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLSNTP*QRRAPQ
Trigger: CTGTGGAGCTCGCCTCTGCCAAGGTGTGTTGCTGAG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTGAATTCCCTTCCCTaGCTGGGTCTGGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLNSLP*LGLDGV
Trigger: TACTCCATCCAGACCCAGCCAGGGAAGGGAATTCAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCAAGCCACAGACTGCTaGATGTGCTGTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCQATDC*MCCSKS
Trigger: TGACTTTGAACAGCACATCCAGCAGTCTGTGGCTTG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCAGGAAGTGTAGCCCAATaGTGCAGCCGGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPGSVAQ*CSRPLL
Trigger: AAGCAGAGGCCGGCTGCACCATTGGGCTACACTTCC...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGCTATGCAGGTCCTTaGGCAGGGCCGGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLCYAGP*AGPGHS
Trigger: TGAGTGGCCCGGCCCTGCCCAAGGACCTGCATAGCA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTGCAGGACGTTGCTGTaGACACTGAAAATTGAATGG +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPCRTLL*TLKIEW
Trigger: CCATTCAATTTTCAGTGTCCACAGCAACGTCCTGCA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCAGAGGATGACTCCAGATaGTCCTGTCAGGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPEDDSR*SCQVSP
Trigger: GGGGGAGACCTGACAGGACCATCTGGAGTCATCCTC...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGAGGATGACTCCAGATaGTCCTGTCAGGTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAEDDSR*SCQVSP
Trigger: GGGGGAGACCTGACAGGACCATCTGGAGTCATCCTC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATACTGCAGCAGATACTGCGGAGGCTGGGTTCTGTTTCCAGTTCTATCCACATGGTGGAAGCCTCTGGCTaGTGCGAGGCCTTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ILQQILRRLGSVSSSIHMVEASG*CEAFGA
Trigger: AGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTCCAC...CATGTGGATAGAACTGGAAACAGAACCCAGCCTCCGCAGTATCTGCTGCAGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACAGAGCTGCACTGCGTaGCGCTGGTTCGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTQSCTA*RWFEEP
Trigger: CGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCATTCGAAGCGGACGATaGCCCCCACCGAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETIRSGR*PPPRSH
Trigger: GTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAAT...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCACAAAACTGACAACTTaGATCTGGATGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCTKLTT*IWMPAP
Trigger: AGGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTCTTCACCCCGTTACTaGGCACAGCAGGTTCCGGAC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRSSPRY*AQQVPD
Trigger: GTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAGA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTCTTCACCCCGTTACTaGGCACAGCAGGTTCCGGAC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASSPRY*AQQVPD
Trigger: GTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAGA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGGCAGAAGGAGCATTGTGCCCTTAGGCAAGCACTCTCAATGAAAGACCTTGCTATGTGGGCGTGGCCCTaGAGGGCATATCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RQKEHCALRQALSMKDLAMWAWP*RAYPGS
Trigger: TGAGCCGGGATATGCCCTCCAGGGCCACGCCCACAT...AGCAAGGTCTTTCATTGAGAGTGCTTGCCTAAGGGCACAATGCTCCTTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTATGTGGGCGTGGCCCTaGAGGGCATATCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSMWAWP*RAYPGS
Trigger: TGAGCCGGGATATGCCCTCCAGGGCCACGCCCACAT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACAGGAGATGTGGGCGTaGCCCTGGAGGGCATATCCC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTQEMWA*PWRAYP
Trigger: GGGATATGCCCTCCAGGGCCACGCCCACATCTCCTG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATACTGCAGCAGATACTGCGGAGGCTGGGTTCTGTTTCCAGTTCTATCCACATGCAGGAGATGTGGGCGTaGCCCTGGAGGGCATATCCC +
Preference number: 4 (lower is better)
Translates to: ILQQILRRLGSVSSSIHMQEMWA*PWRAYP
Trigger: GGGATATGCCCTCCAGGGCCACGCCCACATCTCCTG...CATGTGGATAGAACTGGAAACAGAACCCAGCCTCCGCAGTATCTGCTGCAGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCAGGAGATGTGGGCGTaGCCCTGGAGGGCATATCCC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLQEMWA*PWRAYP
Trigger: GGGATATGCCCTCCAGGGCCACGCCCACATCTCCTG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGCATGCAGGAGATGTaGGCGTGGCCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGMQEM*AWPWRA
Trigger: TGCCCTCCAGGGCCACGCCCACATCTCCTGCATGCC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAGCAGTCCATGTTACTaGGGTAGTTGCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSSPCY*GSCLGS
Trigger: GCTTCCCAGGCAACTACCCCAGTAACATGGACTGCT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCTATGTAGTCGTGGTTaGGCTCGGTGGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGLCSRG*ARWRSS
Trigger: TGAACTTCTCCACCGAGCCCAACCACGACTACATAG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACCTATGTAGTCGTGGTTaGGCTCGGTGGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHLCSRG*ARWRSS
Trigger: TGAACTTCTCCACCGAGCCCAACCACGACTACATAG...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGTGGGAGTGGTCGCTGTaGAAATACACGGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: ISGATGVPNERGMGTEQMWEWSL*KYTVVS
Trigger: CGAGACCACCGTGTATTTCCACAGCGACCACTCCCA...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTGGTGCTGTTTGCTGTaGCCCATCCCAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEWCCLL*PIPDGD
Trigger: ATCACCATCTGGGATGGGCCACAGCAAACAGCACCA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGAAGACGCCGAGCCGTaGTGCTGTTTGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLEDAEP*CCLLWP
Trigger: GGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTTCACATATCGGGGGTaGTCCTTCAAACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCFTYRG*SFKLQV
Trigger: TACCTGCAGTTTGAAGGACCACCCCCGATATGTGAA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTTCACATATCGGGGGTaGTCCTTCAAACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEFTYRG*SFKLQV
Trigger: TACCTGCAGTTTGAAGGACCACCCCCGATATGTGAA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTCAGGATCACGCCTGTaGAGTCTGTCAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSGSRL*SLSEAH
Trigger: ATGAGCTTCTGACAGACTCCACAGGCGTGATCCTGA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCACTGCAGCTGTACATaGCCTTGGTTCCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEHCSCT*PWFPLC
Trigger: ACACAGTGGGAACCAAGGCCATGTACAGCTGCAGTG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCCAGACACTCTGCAGTaGCCTCAGCGCCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSPDTLQ*PQRLPG
Trigger: TCCAGGCAGGCGCTGAGGCCACTGCAGAGTGTCTGG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCCAGACACTCTGCAGTaGCCTCAGCGCCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLPDTLQ*PQRLPG
Trigger: TCCAGGCAGGCGCTGAGGCCACTGCAGAGTGTCTGG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACTTTGCAGACGGGCTTaGTTCCATTCCATGTCCGGT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLCRRA*FHSMSG
Trigger: ACCGGACATGGAATGGAACCAAGCCCGTCTGCAAAG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTCGGATCTATGCAGCTaGGCTGGGTGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASDLCS*AGCHSM
Trigger: CATGGAGTGGCACCCAGCCCAGCTGCATAGATCCGA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCCAGGGCCCCGACGTTaGCATGCGTTGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMPGPRR*HALASL
Trigger: CAGAGACGCCAACGCATGCCAACGTCGGGGCCCTGG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGGCTTGGGTGAGCGGTaGCTCCCGGGCAGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLGLGER*LPGSVD
Trigger: ATCAACACTGCCCGGGAGCCACCGCTCACCCAAGCC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGATGTGGCCCGAACATTaGTGTTCTCGTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEMWPEH*CSRGQH
Trigger: ATGCTGGCCACGAGAACACCAATGTTCGGGCCACAT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAATGTGGCCCGAACATTaGTGTTCTCGTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGMWPEH*CSRGQH
Trigger: ATGCTGGCCACGAGAACACCAATGTTCGGGCCACAT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGATGATGTCTGTGGGCTaGATGTTGCGGTCGTACATT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEMMSVG*MLRSYI
Trigger: AATGTACGACCGCAACATCCAGCCCACAGACATCAT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCTACTTCCTGCCCCCTaGGGAACGGCTGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFLLPAP*GTAAGG
Trigger: GCCTCCAGCAGCCGTTCCCCAGGGGGCAGGAAGTAG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAACGAAGATGGGCACTaGGCACTGTGCTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLANEDGH*ALCSGE
Trigger: CTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCAACGAAGATGGGCACTaGGCACTGTGCTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRNEDGH*ALCSGE
Trigger: CTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCTGCCGCTGTGCAGATaGGCCGTTCATCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLPLCR*AVHQQT
Trigger: TGTCTGCTGATGAACGGCCCATCTGCACAGCGGCAG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTGGCTTTCCAGACCTaGCCACAGTGCTACTGTAGA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELAFQT*PQCYCR
Trigger: TCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACTGGCTTTCCAGACCTaGCCACAGTGCTACTGTAGA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLAFQT*PQCYCR
Trigger: TCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCTAGGTGGGCTTTGTCCCAGTaGTGTCTCCTTGCTCTTAAG +
Preference number: 4 (lower is better)
Translates to: AVVTTCKVPRDGAPGLARWALSQ*CLLALK
Trigger: CTTAAGAGCAAGGAGACACCACTGGGACAAAGCCCA...CCTAGCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCGCTGGCCAGGCATTaGGACCTAGCAGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPLARH*DLAAPS
Trigger: TGAGGGGGCTGCTAGGTCCCAATGCCTGGCCAGCGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR CCA 90 bp TCCCACATTGCACTCACCCTGGACGATAGCTCCTGGGAATGGCAGTCACAGCTGCCAATGAGAGGGGCATaGGAACTGAGCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SHIALTLDDSSWEWQSQLPMRGA*ELSRWR
Trigger: TCTCCATCTGCTCAGTTCCCATGCCCCTCTCATTGG...CAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 72 bp CACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTaGCTGGCTATGGTCAGCGGCTGCTGGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HSVVLIQDLPGL*LAMVSGCWEPR
Trigger: CCTTGGCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCGCTGGATCCTAACCTaGAATCCGAGCCTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKERWILT*NPSLVF
Trigger: AAAGACTAGGCTCGGATTTCAGGTTAGGATCCAGCG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATCACTTTCATACAGGTaGTCCGCTTGGACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSLSYR*SAWTLA
Trigger: TGCAAGGGTCCAAGCGGATCACCTGTATGAAAGTGA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCCTTCCACCCTGCTGGATTAGATGGTGTCAGGGGTGGCAATGACGGTGAGCAGGCATTGTTGTCATACTaGATGGGGAAATTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PFHPAGLDGVRGGNDGEQALLSY*MGKLGE
Trigger: CTCCCCCAATTTCCCCATTCAGTATGACAACAATGC...CTGCTCACCGTCATTGCCACCCCTGACACCATCTAATCCAGCAGGGTGGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGCATTGTTGTCATACTaGATGGGGAAATTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGALLSY*MGKLGE
Trigger: CTCCCCCAATTTCCCCATTCAGTATGACAACAATGC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAGTGTGTCACCGTGGTaGAACCGGGAGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSVSPW*NREPSL
Trigger: GAGGGAAGGCTCCCGGTTTCACCACGGTGACACACT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTATTCTTTTGGCATGTaGTTGCCTTCTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCYSFGM*LPSVPP
Trigger: TGGTGGGACAGAAGGCAATCACATGCCAAAAGAATA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCCACGTCAATGTCGTTaGAGGCCAGGTGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSPRQCR*RPGGCG
Trigger: GCCGCATCCACCTGGCCTTCAACGACATTGACGTGG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCCACGTCAATGTCGTTaGAGGCCAGGTGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLPRQCR*RPGGCG
Trigger: GCCGCATCCACCTGGCCTTCAACGACATTGACGTGG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGATCCAGACAGTGGTCTaGCTGCAGTGTTATAGTCTC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRIQTVV*LQCYSL
Trigger: GAGACTATAACACTGCAGTCAGACCACTGTCTGGAT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAACACACCCTTGCCATaGGATGTTTCGATAATCCAG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAENTPLP*DVSIIQ
Trigger: CTGGATTATCGAAACATCTCATGGCAAGGGTGTGTT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAAGCGGACCTGGGCAGTaGAGTTGCCATAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTSGPGQ*SCHRAQ
Trigger: CTGGGCTCTATGGCAACTTCACTGCCCAGGTCCGCT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCTCCAAGTCGTACTCTaGGAAGGTGATGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRLQVVL*EGDVES
Trigger: GGATTCAACATCACCTTCTCAGAGTACGACTTGGAG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACAGCAAAGTACCCTaGGTGCCTGTGACTGAATTC +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGDSKVP*VPVTEF
Trigger: GAATTCAGTCACAGGCACTCAGGGTACTTTGCTGTC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGCCCTGGCTTTCAGCTaGATTCCCTTCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLALAFS*IPFPGW
Trigger: CCAGCCAGGGAAGGGAATTCAGCTGAAAGCCAGGGC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGCCCTGGCTTTCAGCTaGATTCCCTTCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTALAFS*IPFPGW
Trigger: CCAGCCAGGGAAGGGAATTCAGCTGAAAGCCAGGGC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAATCCAGGGTCACAGCTaGAGGACACGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTIQGHS*RTRSSL
Trigger: CAGGGAGCTCCGTGTCCTTCAGCTGTGACCCTGGAT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGTGGACACTGAAAATTaGATGGCAAAGCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGVDTEN*MAKPCL
Trigger: CAAGCAGGGCTTTGCCATTCAATTTTCAGTGTCCAC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAATTTGGTGAGAGGATaGCTCCAGATGGTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGNLVRG*LQMVLS
Trigger: TGACAGGACCATCTGGAGTCATCCTCTCACCAAATT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCGTGGCAGTAGTAGGTaGCGGAGGAGCCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSRGSSR*RRSPAS
Trigger: TGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCCTCCACCACGTCGTTaGGGGCCGTGTGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSPPPRR*GPCERR
Trigger: CCTTCTTTCACACGGCCCTCAACGACGTGGTGGAGG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAGGCACGGTTGTTCCTaGGAAACTCCCCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLARHGCS*ETPQHG
Trigger: ACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAATGGCCATGCTCCGGGTaGAGACGCCGAGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKWPCSG*RRRAVV
Trigger: CACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCA...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCATTCTTCATTCTCTGTaGCGACTTCGGCGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCILHSL*RLRRWG
Trigger: TCCCCAACGCCGAAGTCGTCACAGAGAATGAAGAAT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACTGAATAGCGGATCTTaGAGCCCTTCCGATTGTAGG +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLNSGS*SPSDCR
Trigger: CCTACAATCGGAAGGGCTTCAAGATCCGCTATTCAG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTCCATGTCCCATCTaGCTGGCAAAACCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRTPCPI*LAKPAW
Trigger: CCACGCAGGTTTTGCCAGTCAGATGGGACATGGAGT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCTGACTCCAGCAGCCTaGGGTCCAGTCTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLTPAA*GPVFES
Trigger: GCTTTCAAAGACTGGACCTCAGGCTGCTGGAGTCAG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCGGGTTTCTGCACTCTaGCCGCATGATGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRRVSAL*PHDGMC
Trigger: ACACATCCCATCATGCGGTCAGAGTGCAGAAACCCG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTTCCTCATGGGATGGTaGTGGGTATATGGCGTAGAT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGFLMGW*WVYGVD
Trigger: ATCTACGCCATATACCCATCACCATCCCATGAGGAA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGATTAGATGGTGTCAGGGGTGGCAATGACGGTGAGCAGGAAATGTCTGGGTCTCCTCAAAGGCGAGCTTaGTCACCTGTAGGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GLDGVRGGNDGEQEMSGSPQRRA*SPVGQF
Trigger: GAACTGGCCTACAGGTGATCAAGCTCGCCTTTGAGG...AGACCCAGACATTTCCTGCTCACCGTCATTGCCACCCCTGACACCATCTAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGTCCCATTGGGACCGTaGAGTTGGAACGTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAVPLGP*SWNVQF
Trigger: GAACTGCACGTTCCAACTGCACGGTCCCAATGGGAC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGTCCCATTGGGACCGTaGAGTTGGAACGTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRVPLGP*SWNVQF
Trigger: GAACTGCACGTTCCAACTGCACGGTCCCAATGGGAC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCAGGCATCATCAGCTCTaGAGGAAGGCAGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRRHHQL*RKAGGS
Trigger: ACTTCCCCCTGCCTTCCTGCAGAGCTGATGATGCCT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTCTGGCTGTTGTCTTTaGTGGGCATCAGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKESGCCL*WASASH
Trigger: GTGTGAAGCTGATGCCCAGCAAAGACAACAGCCAGA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTCTGGCTGTTGTCTTTaGTGGGCATCAGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSGCCL*WASASH
Trigger: GTGTGAAGCTGATGCCCAGCAAAGACAACAGCCAGA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCGAGCCTAGTCTTTTaGCCCTTTCGGGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPSLVF*PFRVCQ
Trigger: CTGGCATACCCGAAAGGGGCAAAAGACTAGGCTCGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTTGGAGGGGTTGAGTaGTGTGATGATCCACACACA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELGGVE*CDDPHT
Trigger: TGTGTGTGGATCATCACAGCACTCAACCCCTCCAAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTTGGAGGGGTTGAGTaGTGTGATGATCCACACACA +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLGGVE*CDDPHT
Trigger: TGTGTGTGGATCATCACAGCACTCAACCCCTCCAAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGAAGGAGATGGAGCTaGCCAGCTGGAGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFGRRWS*PAGGCP
Trigger: GGGACAGCCTCCAGCTGGGCAGCTCCATCTCCTTCC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAATCAAGCCACAGACTaGTGGATGTGCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAENQATD*WMCCSK
Trigger: CTTTGAACAGCACATCCAGCAGTCTGTGGCTTGATT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGATCCCAGGGTCATTaGAGGACGTTGCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGSQGH*RTLLWT
Trigger: TGTCCACAGCAACGTCCTGCAATGACCCTGGGATCC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAACCCCGCAGGGAGCGATaGATGTTGGCGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKPRRER*MLAGWA
Trigger: AGCCCAGCCCGCCAACATGCATCGCTCCCTGCGGGG...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCAGAGGCTGTTGCTGCTaGTTTCAATGCGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETRGCCC*FQCGLG
Trigger: TCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCT...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCACTGTTCCGGGCATaGAGGAGATGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFALFRA*RRCGRG
Trigger: GCCACGCCCACATCTCCTGCATGCCCGGAACAGTGC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGCGGTAGCCGGCGTTaGAGCCAAAGTGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFGGSRR*SQSGWS
Trigger: GCTCCATCCACTTTGGCTGCAACGCCGGCTACCGCC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGGTACAGATGGCCATaGTGTGTCCCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGYRWP*CVPPGG
Trigger: ACCGCCTGGTGGGACACAGCATGGCCATCTGTACCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGTGTCCAGACACTCTaGAGTGGCCTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLCVQTL*SGLSAC
Trigger: GCAGGCGCTGAGGCCACTGCAGAGTGTCTGGACACA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCATTGGTACACCACACTaGCCCGGTAGCTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCIGTPH*PGSCSS
Trigger: AGAACTACAGCTACCGGGGCAGTGTGGTGTACCAAT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGCGGAAGCCAGCATTaGATTGGTACACCACACTGC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGGSQH*IGTPHC
Trigger: GCAGTGTGGTGTACCAATGCAATGCTGGCTTCCGCC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGCAGCTGGGCTGGGTaGCACTCCATGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLCSWAG*HSMSHL
Trigger: CAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTGGGGTAATCCTTGCTaGCGCTGTGCAGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSWGNPC*RCADGP
Trigger: CGGCCCATCTGCACAGCGGCAGCAAGGATTACCCCA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTCCTGGCCAGACTCCTaGCCTATCCTCCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSWPDS*PILPGS
Trigger: AGAGCCGGGGAGGATAGGGCAGGAGTCTGGCCAGGA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTCCTTGCCCCGAAGCTaGCTACGCGGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSLPRS*LRGDSR
Trigger: TCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCTATGGTCAGCGGCTaGTGGGAGCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFAMVSG*WEPRSQ
Trigger: CTGGCTCCTTGGCTCCCAGCAGCCGCTGACCATAGC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCGTCTACCTGCCAAGGTaGCTGCGTGTCTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETVYLPR*LRVCPV
Trigger: AACTGGACAGACACGCAGGCACCTTGGCAGGTAGAC...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGACTGGAACACAAGCTaGATTCTGTGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEDWNTS*ILCCSS
Trigger: GGAAGAGCAGCACAGAATCCAGCTTGTGTTCCAGTC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCGCAGATTCTCTGGCTaGGGTGGACCATCAAACACC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRRRFSG*GGPSNT
Trigger: GGTGTTTGATGGTCCACCCCAGCCAGAGAATCTGCG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCAAGGTTGAACCCTGCTaGATGCCATTGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRKVEPC*MPLGSL
Trigger: GAGGCTGCCCAATGGCATCCAGCAGGGTTCAACCTT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAAGGTTGAACCCTGCTaGATGCCATTGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAKVEPC*MPLGSL
Trigger: GAGGCTGCCCAATGGCATCCAGCAGGGTTCAACCTT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTATGGAGGAGGGAAGCTaGTTTCCTGAGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAMEEGS*FPEKVP
Trigger: GGGCACCTTCTCAGGAAACCAGCTTCCCTCCTCCAT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCATGGAGGAGGGAAGCTaGTTTCCTGAGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRMEEGS*FPEKVP
Trigger: GGGCACCTTCTCAGGAAACCAGCTTCCCTCCTCCAT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCCGTTTGCCATTTACTaGAACGCCAGGATCCGGGCA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAPFAIY*NARIRA
Trigger: TGCCCGGATCCTGGCGTTCCAGTAAATGGCAAACGG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCGTTTGCCATTTACTaGAACGCCAGGATCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPFAIY*NARIRA
Trigger: TGCCCGGATCCTGGCGTTCCAGTAAATGGCAAACGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTAGCCCGGAGAGAGGATaGTGCCGCTGGGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFSPERG*CRWAKS
Trigger: TGACTTCGCCCAGCGGCACCATCCTCTCTCCGGGCT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGACGCTGTCCATTTACTaGGATTCCTGGATCCAGACA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRTLSIY*DSWIQT
Trigger: TGTCTGGATCCAGGAATCCCAGTAAATGGACAGCGT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGCAGTTCAAGTTGTTaGGGTAGAAGTCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGCSSSC*GRSQGT
Trigger: GGTTCCCTGACTTCTACCCCAACAACTTGAACTGCA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCTTGTAGCCAAACTTaGGGGTTCCTGGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPCSQT*GFLGPH
Trigger: GTGAGGACCCAGGAACCCCCAAGTTTGGCTACAAGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCCTTGTAGCCAAACTTaGGGGTTCCTGGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAPCSQT*GFLGPH
Trigger: GTGAGGACCCAGGAACCCCCAAGTTTGGCTACAAGG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAGCAGATCTGTCCACTaGTGTAGTTCTGGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSRSVH*CSSGGS
Trigger: ACTACCCCCAGAACTACACCAGTGGACAGATCTGCT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCAGTGATTCTCCTGTATaGGAGCCCGAGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETSDSPV*EPEREL
Trigger: CAGCTCCCTCTCGGGCTCCCATACAGGAGAATCACT...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGGAAGCCTCTGGCTaGTGCGAGGCCTTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFVEASG*CEAFGA
Trigger: AGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTCCAC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGAGGCACTCGATCTCTaGCGACCCCTGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLEALDL*RPLQGI
Trigger: TATGCCCTGCAGGGGTCGCCAGAGATCGAGTGCCTC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTACACGGTGGTCTCGTaGGACGTGGAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLYTVVS*DVERRE
Trigger: CTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTGGGAGTGGTCGCTGTaGAAATACACGGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAWEWSL*KYTVVS
Trigger: CGAGACCACCGTGTATTTCCACAGCGACCACTCCCA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACTCCAGCTTGAATCCTaGCCGATTCTGGGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPLQLES*PILGVV
Trigger: GACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAG...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCTCCAGCTTGAATCCTaGCCGATTCTGGGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLALQLES*PILGVV
Trigger: GACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGATTGGCAAAGGGCTCTaGGTCTGGGCACTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: ISGATGVPNERGMGTEQMIGKGL*VWALLK
Trigger: CTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAAT...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGGGCATTTGGTGAGTaGATAAGCGGAGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAERAFGE*ISGESY
Trigger: ATAGCTTTCTCCGCTTATCCACTCACCAAATGCCCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGGGCATTTGGTGAGTaGATAAGCGGAGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCRAFGE*ISGESY
Trigger: ATAGCTTTCTCCGCTTATCCACTCACCAAATGCCCT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTCAGGATCACGCCTGTaGAGTCTGTCAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSGSRL*SLSEAH
Trigger: ATGAGCTTCTGACAGACTCCACAGGCGTGATCCTGA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCATGGAGTGGAGCCCTaGGCAGGCTGCAGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMHGVEP*AGCSKG
Trigger: CCCCTTACTGCAGCCTGCCCAGGGCTCCACTCCATG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGATGAAGCCATGGAGTaGAGCCCTGGGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSDEAME*SPGQAA
Trigger: TGCAGCCTGCCCAGGGCTCCACTCCATGGCTTCATC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGATGAAGCCATGGAGTaGAGCCCTGGGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLDEAME*SPGQAA
Trigger: TGCAGCCTGCCCAGGGCTCCACTCCATGGCTTCATC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGGCTGGGTGCTGGTCTaGCCTAGGATGAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSGWVLV*PRMKPW
Trigger: CCATGGCTTCATCCTAGGCCAGACCAGCACCCAGCC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTATGGAGCCCCCGGGCTaGGTGCTGGTCTGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPMEPPG*VLVWPR
Trigger: CCTAGGCCAGACCAGCACCCAGCCCGGGGGCTCCAT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTACACCATTCCATTCTTaGGGGCCTCAGGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLATPFHS*GPQEAH
Trigger: GTGGGCTTCCTGAGGCCCCCAAGAATGGAATGGTGT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAGCTGTACATGGCCTTaGTTCCCACTGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKESCTWP*FPLCTP
Trigger: AGGAGTACACAGTGGGAACCAAGGCCATGTACAGCT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCAGACACTCTGCAGTaGCCTCAGCGCCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPDTLQ*PQRLPG
Trigger: TCCAGGCAGGCGCTGAGGCCACTGCAGAGTGTCTGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCGCTCCACGAGCCATTaGCTTGACAGGTGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLRSTSH*LDRCAL
Trigger: CAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACGCTCCACGAGCCATTaGCTTGACAGGTGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTRSTSH*LDRCAL
Trigger: CAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGGGATGAGCGGAGGTaGCTTGCACATGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGDERR*LAHESF
Trigger: AAAGCTCTCATGTGCAAGCCACCTCCGCTCATCCCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGCGGGCAGGGAGAGCTaGTACCCCTCCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPAGRES*YPSRQA
Trigger: TGCCTGCCTGGAGGGGTACCAGCTCTCCCTGCCCGC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACTGGCAAAACCTGCGTaGAGAGCCCACCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLAKPA*RAHQHQ
Trigger: CTGGTGCTGGTGGGCTCTCCACGCAGGTTTTGCCAG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGACGTTGGCATGCGTTaGCGTCTCTGGCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLDVGMR*RLWLPA
Trigger: TGCAGGCAGCCAGAGACGCCAACGCATGCCAACGTC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATGGTGTAGTGGACTTTaGGGCAGACTGATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGWCSGL*GRLIWV
Trigger: AACCCAGATCAGTCTGCCCCAAAGTCCACTACACCA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTGGTGTAGTGGACTTTaGGGCAGACTGATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEWCSGL*GRLIWV
Trigger: AACCCAGATCAGTCTGCCCCAAAGTCCACTACACCA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCACTCGCAAGGAGCTaGAGAGGTGTGACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPLARS*RGVTFS
Trigger: GCTGAAAGTCACACCTCTCCAGCTCCTTGCGAGTGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTGTGTCTGCTGGAAATaGACGCCTCTCACTTTCCTC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKECVCWK*TPLTFL
Trigger: GAGGAAAGTGAGAGGCGTCCATTTCCAGCAGACACA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTGTGTCTGCTGGAAATaGACGCCTCTCACTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCCVCWK*TPLTFL
Trigger: GAGGAAAGTGAGAGGCGTCCATTTCCAGCAGACACA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTCCTCGAGCATCTCATaGAACTTTACAAGGAGACGC +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSSSIS*NFTRRR
Trigger: GCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 72 bp TCTGAGCCTGGTGGGCTTTGTCCCAGTGGTGTCTCCTaGCTCTTAAGGATCACCAAGAAGGGTAAGACGGTG +
Preference number: 4 (lower is better)
Translates to: SEPGGLCPSGVS*LLRITKKGKTV
Trigger: CACCGTCTTACCCTTCTTGGTGATCCTTAAGAGCAAGGAGACACCACTGGGACAAAGCCCACCAGGCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGTGTGTCACCGTGGTaGAACCGGGAGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSVSPW*NREPSL
Trigger: GAGGGAAGGCTCCCGGTTTCACCACGGTGACACACT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGCAGGTGATGGTCTCTaGGCCCTGAGTCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTAGDGL*ALSPKE
Trigger: TTCCTTGGGACTCAGGGCTCAGAGACCATCACCTGC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGATCCAGACAGTGGTCTaGCTGCAGTGTTATAGTCTC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEIQTVV*LQCYSL
Trigger: GAGACTATAACACTGCAGTCAGACCACTGTCTGGAT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGCGGACCTGGGCAGTaGAGTTGCCATAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSGPGQ*SCHRAQ
Trigger: CTGGGCTCTATGGCAACTTCACTGCCCAGGTCCGCT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGTTGAATCCTTCATATaGCATGGAGAAATCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPVESFI*HGEIRD
Trigger: ATCTCTGATTTCTCCATGTCATATGAAGGATTCAAC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGTGGACACTGAAAATTaGATGGCAAAGCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCVDTEN*MAKPCL
Trigger: CAAGCAGGGCTTTGCCATTCAATTTTCAGTGTCCAC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCCGATCTTCACACAGCTaGTCTCTGCACTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETRSSHS*SLHFPA
Trigger: TGCAGGGAAGTGCAGAGATCAGCTGTGTGAAGATCG...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTTCTGGGTAATTTGGTaGGAGGATGACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEFWVIW*EDDSRW
Trigger: CCATCTGGAGTCATCCTCTCACCAAATTACCCAGAA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATCGTTGAGGGCCGTGTaGAAGAAGGCGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTSLRAV*KKANWP
Trigger: TGGCCAGTTCGCCTTCTTTCACACGGCCCTCAACGA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCACACACGTGGGCGCTaGGACATTCCATTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSHTRGR*DIPLGQ
Trigger: TTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGCTCTGTCACAAAACTaGCAACTTGGATCTGGATGC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCALSQN*QLGSGC
Trigger: GCATCCAGATCCAAGTTGTCAGTTTTGTGACAGAGC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTGCCATGTTGACACGTaGGGACAGGGTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSCHVDT*GQGGQS
Trigger: TGACTGGCCACCCTGTCCTCACGTGTCAACATGGCA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCGGTTGGTGCCATGTTaGCACGTGAGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMRLVPC*HVRTGW
Trigger: CCACCCTGTCCTCACGTGTCAACATGGCACCAACCG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGCCAATGGGCACGGTaGTCAGCCAGACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGQWAR*SARHSP
Trigger: AGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCAGGACCTGGTTGGATaGACTCTGCACTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEQDLVG*TLHCFL
Trigger: AAGAAAACAGTGCAGAGTTCATCCAACCAGGTCCTG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGAGGAGGGCATTTGGTaGGTGGATAAGCGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAEEGIW*VDKRRK
Trigger: CTTTCTCCGCTTATCCACTCACCAAATGCCCTCCTC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACAGAGGACTCTGTCCTaGTGGACCATCAAAAATCTC +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGQRTLS*WTIKNL
Trigger: GAGATTTTTGATGGTCCATCAGGACAGAGTCCTCTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTAGCCAGGGTCACAGATaGGCATCAGCTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFSQGHR*ASAGPG
Trigger: TCCAGGCCCAGCTGATGCTCATCTGTGACCCTGGCT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCACGAGCCATTGGCTTaGCAGGTGCGCTCTGACGAT +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLHEPLA*QVRSDD
Trigger: ATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCTTCCCATTGGGGATaGGCGGAGGTGGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPSHWG*AEVACT
Trigger: TGTGCAAGCCACCTCCGCTCATCCCCAATGGGAAGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCCATCTAAAGCCCAGTaGTCATCTTTGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPPSKAQ*SSLNLF
Trigger: GAATAAGTTCAAAGATGATCACTGGGCTTTAGATGG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATTCCTCATGGGATGGTaGTGGGTATATGGCGTAGAT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGFLMGW*WVYGVD
Trigger: ATCTACGCCATATACCCATCACCATCCCATGAGGAA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTTAAACTGGTTACCCTaGGTGAGGCCGTTGACAGGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLNWLP*VRPLTG
Trigger: CCCTGTCAACGGCCTCACTCAGGGTAACCAGTTTAA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGCCTTGGGCACTGACTaGATAGTCGCTGATGAGGCG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTALGTD*IVADEA
Trigger: CGCCTCATCAGCGACTATGCAGTCAGTGCCCAAGGC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCACTGAATCCGCGCTaGCGGTGGTTGCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFALNPR*RWLPSD
Trigger: ATCGGATGGCAACCACCGGCAGCGCGGATTCAGTGC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCAGTGCTACAGTCGACATTCCTGCCAGAAATAAGGACCCCACCAGCAACGTTCCAGGGTCACCGCAACTaGCCTGCTCGATCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SVLQSTFLPEIRTPPATFQGHRN*PARSLH
Trigger: ATGAAGAGATCGAGCAGGGCAGTTGCGGTGACCCTG...GAACGTTGCTGGTGGGGTCCTTATTTCTGGCAGGAATGTCGACTGTAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCACAGTGGAGGTGGTTaGCATAGTCCTCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAHSGGG*HSPLGS
Trigger: ACTACCCAGAGGACTATGGCAACCACCTCCACTGTG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTTCGGAGAGTTCGAATaGCCTGGCTTTCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEFGEFE*PGFQLN
Trigger: ATTCAGCTGAAAGCCAGGGCATTCGAACTCTCCGAA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTCAAAGCTGGAAAAGTaGAGTTCAAAGCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSKLEK*SSKPLL
Trigger: CAGCAAGGGCTTTGAACTGCACTTTTCCAGCTTTGA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAAGTGTAGCCCAATGGTaGAGCCGGCCTCTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTSVAQW*SRPLLR
Trigger: TCGAAGCAGAGGCCGGCTGCACCATTGGGCTACACT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAGTGTAGCCCAATGGTaGAGCCGGCCTCTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSVAQW*SRPLLR
Trigger: TCGAAGCAGAGGCCGGCTGCACCATTGGGCTACACT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACTCCGACTCCCATTCTaGGGGATCCCAGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLRLPF*GIPGSL
Trigger: CAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGTTGGCGGGCTGGGCTaGCAGAAGAACCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMVGGLG*QKNLFS
Trigger: CGAGAACAGGTTCTTCTGGCAGCCCAGCCCGCCAAC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTCACAGATGCATCGCTaGGGAAGGCGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSQMHR*GRRGRG
Trigger: GCCTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACCACCGAGAAGTCACTaGCCAGCCTCTTGCCATAGC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTPPRSH*PASCHS
Trigger: GCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGGCATAGCCGGAGTTaGATTCGAAGCGGACGATGG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGHSRS*IRSGRW
Trigger: CCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCAAAAGCCCACGGGCAGTaGTATTTTCCAGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPKAHGQ*YFPGAV
Trigger: GACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTT...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGGTAGGTTCCAAGTTTaGAGGTCAGAATTTCATTCC +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEGRFQV*RSEFHS
Trigger: GGAATGAAATTCTGACCTGCAAACTTGGAACCTACC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGTAGGTTCCAAGTTTaGAGGTCAGAATTTCATTCC +
Preference number: 4 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGRFQV*RSEFHS
Trigger: GGAATGAAATTCTGACCTGCAAACTTGGAACCTACC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATCAAACTCATCATATTaGTTCTCGCTGAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: QGASTNRGRPGELNPCPESNSSY*FSLRKY
Trigger: GTACTTCCTCAGCGAGAAGCAATATGATGAGTTTGA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAGCCTCCATCGGCCATaGTCCACGCTGATGCTACTG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSLHRP*STLMLL
Trigger: CAGTAGCATCAGCGTGGAGCATGGCCGATGGAGGCT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGAGAAGATGGCTGTTaGCCCGTAGACAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGEDGC*PVDRQC
Trigger: ACACTGTCTGTCTACGGGGCAACAGCCATCTTCTCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGAGATGCGCACAGACATaGCGATCAGGCGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLRCAQT*RSGGSQ
Trigger: CTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCCACCAGAGTACGCTTaGCGATGCAGCTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLPPEYA*RCSCTA
Trigger: TGCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCATGTCCGGTCCTTGGTaGAGCTCAGCACAGATACTC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRMSGPW*SSAQIL
Trigger: GAGTATCTGTGCTGAGCTGCACCAAGGACCGGACAT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCTGTGGGCTGGATGTTaGGGTCGTACATTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLWAGC*GRTLGS
Trigger: AGAACCCAATGTACGACCGCAACATCCAGCCCACAG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTCCTTGCCCCGAAGCTaGCTACGCGGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSLPRS*LRGDSR
Trigger: TCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTTCCAATCTAGAATTTaGTTAAGAACCAGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPFQSRI*LRTRCR
Trigger: GCGACACCTGGTTCTTAAGCAAATTCTAGATTGGAA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCCAGGGGTAGGCTCCTaGCTCTGTCAGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMPGVGS*LCQPPL
Trigger: CAATGGAGGCTGACAGAGGCAGGAGCCTACCCCTGG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGTGAAGGGCCTCATCTaGCCTGTTCCCTTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSVKGLI*PVPFQA
Trigger: GGCTTGGAAGGGAACAGGGCAGATGAGGCCCTTCAC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTGGTGGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCTGCTGGATCACACATGCGGGCTTTaGAAAGAGGACCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: AGGVYSLTNLTVPSTLLDHTCGL*KEDLWT
Trigger: AGTCCACAGGTCCTCTTTGCAAAGCCCGCATGTGTG...ATCCAGCAGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp GCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCTAGGAGCATCCATTGTCCTTaGTGTTTCCCAGAAGACAAC +
Preference number: 4 (lower is better)
Translates to: AVVTTCKVPRDGAPGLARSIHCP*CFPEDN
Trigger: GTTGTCTTCTGGGAAACAGCAAGGACAATGGATGCT...CCTAGCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp TCAGTGCTACAGTCGACATTCCTGCCAGAAATAAGGACCCCACCAGCAACGTTCGCTGTTGTTACAACCTaGAAGGTTCCCAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: SVLQSTFLPEIRTPPATFAVVTT*KVPRDG
Trigger: CCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGC...GAACGTTGCTGGTGGGGTCCTTATTTCTGGCAGGAATGTCGACTGTAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAATTGGGCAGCCTCCCTaGGTTCCCACATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTIGQPP*VPTCVA
Trigger: AGCCACACATGTGGGAACCCAGGGAGGCTGCCCAAT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCAGTCGGCATTGTTATaGTACTCCGAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRQSALL*YSEGKW
Trigger: CCACTTCCCCTCGGAGTACCATAACAATGCCGACTG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAATCCGCGCTGCCGGTaGTTGCCATCCGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSNPRCR*LPSDVK
Trigger: CTTCACATCGGATGGCAACCACCGGCAGCGCGGATT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGGTATGCCAGGGTCTaGACACATATTATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGYARV*THIMSL
Trigger: CAAGGACATAATATGTGTCCAGACCCTGGCATACCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTCGTTGCAGGTGAACTaGACGCTGGATCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASLQVN*TLDPNL
Trigger: CAGGTTAGGATCCAGCGTCCAGTTCACCTGCAACGA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCATTGGTTATTCTTTTaGCATGTGATTGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHWLFF*HVIAFC
Trigger: ACAGAAGGCAATCACATGCCAAAAGAATAACCAATG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGTGGAGTGGTCAGTCTaGAACTCGAGACGGGCCACG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMVEWSV*NSRRAT
Trigger: CGTGGCCCGTCTCGAGTTCCAGACTGACCACTCCAC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGAGGATGGTGCCGCTaGGCGAAGTCAGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMRGWCR*AKSGDH
Trigger: GTGGTCACCTGACTTCGCCCAGCGGCACCATCCTCT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCTCAGCAACACACCTTaGCAGAGGCGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLSNTP*QRRAPQ
Trigger: CTGTGGAGCTCGCCTCTGCCAAGGTGTGTTGCTGAG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACTCAGCAACACACCTTaGCAGAGGCGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLSNTP*QRRAPQ
Trigger: CTGTGGAGCTCGCCTCTGCCAAGGTGTGTTGCTGAG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACTGAATTCCCTTCCCTaGCTGGGTCTGGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPLNSLP*LGLDGV
Trigger: TACTCCATCCAGACCCAGCCAGGGAAGGGAATTCAG...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAGAGTTCGAATGCCCTaGCTTTCAGCTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGRVRMP*LSAEFP
Trigger: AGGGAATTCAGCTGAAAGCCAGGGCATTCGAACTCT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCAAGCCACAGACTGCTaGATGTGCTGTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEQATDC*MCCSKS
Trigger: TGACTTTGAACAGCACATCCAGCAGTCTGTGGCTTG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAAACTTGGGGGTTCCTaGGTCCTCACATTTGATGAG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEKLGGS*VLTFDE
Trigger: CTCATCAAATGTGAGGACCCAGGAACCCCCAAGTTT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATACTCGGCGACACAGGTaGGCAGAGGCCGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHTRRHR*AEAGPR
Trigger: CCTGGGACCGGCCTCTGCCCACCTGTGTCGCCGAGT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGGAAGTGTAGCCCAATaGTGCAGCCGGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSGSVAQ*CSRPLL
Trigger: AAGCAGAGGCCGGCTGCACCATTGGGCTACACTTCC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTGCACTGCGTGGCGCTaGTTCGAGGAACCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMCTAWR*FEEPLG
Trigger: ACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAATTCGAAGCGGACGATaGCCCCCACCGAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTIRSGR*PPPRSH
Trigger: GTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAAT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCTGACAACTTGGATCTaGATGCCAGCGCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLLTTWI*MPAPSG
Trigger: CCCCGAAGGCGCTGGCATCCAGATCCAAGTTGTCAG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAACAAAACTGACAACTTaGATCTGGATGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGTKLTT*IWMPAP
Trigger: AGGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTATCCCGGCTCACACTaGAAAGACACCACATCATTC +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEYPGSH*KDTTSF
Trigger: GAATGATGTGGTGTCTTTCCAGTGTGAGCCGGGATA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTATCCCGGCTCACACTaGAAAGACACCACATCATTC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCYPGSH*KDTTSF
Trigger: GAATGATGTGGTGTCTTTCCAGTGTGAGCCGGGATA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTGTGGAAATACACGGTaGTCTCGTGGGACGTGGAGA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLACGNTR*SRGTWR
Trigger: TCTCCACGTCCCACGAGACCACCGTGTATTTCCACA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAAAGGGCTCTGGGTCTaGGCACTCTTGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGKGLWV*ALLKFI
Trigger: TATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTATTGGCAAAGGGCTCTaGGTCTGGGCACTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAIGKGL*VWALLK
Trigger: CTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAAT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTTGAGGCGGACGCCATaGCCAATGGGCACGGTGATC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMLRRTP*PMGTVI
Trigger: GATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCATGGTGCTGTTTGCTGTaGCCCATCCCAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPWCCLL*PIPDGD
Trigger: ATCACCATCTGGGATGGGCCACAGCAAACAGCACCA...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCAGAAGCTCATTTGTTaGACAGTGCACTTCACATAT +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPQKLIC*TVHFTY
Trigger: ATATGTGAAGTGCACTGTCCAACAAATGAGCTTCTG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCCTAGGATGAAGCCATaGAGTGGAGCCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMPRMKP*SGALGR
Trigger: CCTGCCCAGGGCTCCACTCCATGGCTTCATCCTAGG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGCTGGGTGCTGGTCTaGCCTAGGATGAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFGWVLV*PRMKPW
Trigger: CCATGGCTTCATCCTAGGCCAGACCAGCACCCAGCC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGCGTTGCAGCCAAAGTaGATGGAGCCCCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPALQPK*MEPPGW
Trigger: CCAGCCCGGGGGCTCCATCCACTTTGGCTGCAACGC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCACTCCAGAGCCCATTaGCCATGCACTCACGCACCC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFHSRAH*PCTHAP
Trigger: GGGTGCGTGAGTGCATGGCCAATGGGCTCTGGAGTG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCGCAAACTCCCACGCTaGTTCCTGAGCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLRKLPR*FLSSEG
Trigger: TCCCTCACTGCTCAGGAACCAGCGTGGGAGTTTGCG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACCGAAGGCCATTGGCTaGAATCCCAGGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTPKAIG*NPRVTT
Trigger: TGTGGTGACCCTGGGATTCCAGCCAATGGCCTTCGG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCCGAAGGCCATTGGCTaGAATCCCAGGGTCACCACA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSPKAIG*NPRVTT
Trigger: TGTGGTGACCCTGGGATTCCAGCCAATGGCCTTCGG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCATGTCCCATCTGACTaGCAAAACCTGCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAHVPSD*QNLRGE
Trigger: CTCTCCACGCAGGTTTTGCCAGTCAGATGGGACATG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTCGGATCTATGCAGCTaGGCTGGGTGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSDLCS*AGCHSM
Trigger: CATGGAGTGGCACCCAGCCCAGCTGCATAGATCCGA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTATGTGGCCCGAACATTaGTGTTCTCGTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAMWPEH*CSRGQH
Trigger: ATGCTGGCCACGAGAACACCAATGTTCGGGCCACAT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGTTGCGGTCGTACATTaGGTTCTCAAATGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRVAVVH*VLKCGP
Trigger: CGGGCCACATTTGAGAACCCAATGTACGACCGCAAC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGGCGGCCAGGCCGGGTaGCTATACTGCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPGGQAG*LYCCAH
Trigger: GTGTGCACAGCAGTATAGCCACCCGGCCTGGCCGCC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCAACCGTGGGAGGCCTaGGGAGTTGAATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFQPWEA*GVESLP
Trigger: GGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGTCTTTTGCTGGCTATaGTCAGCGGCTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTVFCWL*SAAAGS
Trigger: GCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGAC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTCCTCGAGCATCTCATaGAACTTTACAAGGAGACGC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSSSIS*NFTRRR
Trigger: GCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GGCTGGTGGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCTGCTGGAACAGTTACTGGAGGCTaGTGGTGTCTACAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: GWWCLQPYKLDSPFHPAGTVTGG*WCLQPY
Trigger: GTAAGGCTGTAGACACCACCAGCCTCCAGTAACTGT...TCCAGCAGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGTGTCCACAGGTAATTaGCACACAGAAAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEVSTGN*HTERGL
Trigger: AAGACCCCTTTCTGTGTGCCAATTACCTGTGGACAC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGCTGCTCTTCCGCGGTaGTGGTCCACGTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPAALPR*WSTCSW
Trigger: CCAACTGCACGTGGACCATCACCGCGGAAGAGCAGC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTATGGTGGCTGGCAGCTaGAAGCCTGTGAGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFMVAGS*KPVSLV
Trigger: TACGAGGCTCACAGGCTTTCAGCTGCCAGCCACCAT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCCCCAAATGTCAGGAGCACTTGTTCTCAGTGCTACAGTCGACATTCCTGCCAGGCTGGCACTCAAACTTaGGTGTGTCACCGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SPNVRSTCSQCYSRHSCQAGTQT*VCHRGE
Trigger: TTCACCACGGTGACACACTCAAGTTTGAGTGCCAGC...CTGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTGACATTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCGACAGCAAAGTACCCTaGGTGCCTGTGACTGAATTC +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETDSKVP*VPVTEF
Trigger: GAATTCAGTCACAGGCACTCAGGGTACTTTGCTGTC...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATAGCTGGATACCCGGGTaGCAGCACCTGCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHSWIPG*QHLPRH
Trigger: GTGTCGGGGCAGGTGCTGTCACCCGGGTATCCAGCT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCAGGACGACCGAGTTaGAGGTGCTATGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFAGRPS*RCYAGP
Trigger: AGGACCTGCATAGCACCTTCAACTCGGTCGTCCTGC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTGGCTGTGGCCGTCGTaGACCTCCACCACGTCGTTG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPWLWPS*TSTTSL
Trigger: CAACGACGTGGTGGAGGTTCACGACGGCCACAGCCA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAGATACGCTGATATCTaGGTAGAAATGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: ALFPSKPLEVERNVRGAERYADI*VEMKVE
Trigger: CTCTACCTTCATTTCTACTCAGATATCAGCGTATCT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGCGATCCGCCCACCTCGGCCTCTGTGTTTCCTGTGCTTCTTAGCTCTTTCCACCAGCTGCAGATACGCTaGTATCTGAGTAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: GDPPTSASVFPVLLSSFHQLQIR*YLSRNE
Trigger: TTCATTTCTACTCAGATATCAGCGTATCTGCAGCTG...GTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGGCCGAGGTGGGCGGATCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGAAGCTCGCTTCCACTaGATCTTCCCATCATGCGGC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLEARFH*IFPSCG
Trigger: GCCGCATGATGGGAAGATTCAGTGGAAGCGAGCTTC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGCACTCGAAGGTCACTaGTTGTCCCACGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTALEGH*LSHVVA
Trigger: GGCTACAACGTGGGACAATCAGTGACCTTCGAGTGC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAGGGTGGCCAGTCAATTaGTACCCCGGGAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKGWPVN*YPGRHS
Trigger: CGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCC...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTGCCATGTTGACACGTaGGGACAGGGTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFCHVDT*GQGGQS
Trigger: TGACTGGCCACCCTGTCCTCACGTGTCAACATGGCA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGCCGTTGGAAGAAGTaGTGTTCCCGCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLCRWKK*CSRHKG
Trigger: TCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTGCCGTTGGAAGAAGTaGTGTTCCCGCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSCRWKK*CSRHKG
Trigger: TCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGCAGTCACAGCTGCTTAGGTTCTTTACATCCTTGTTTCTCTCTGTTGCTTCCGGCCAATGGGCACGGTaGTCAGCCAGACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: WQSQLLRFFTSLFLSVASGQWAR*SARHSP
Trigger: AGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCC...GGAAGCAACAGAGAGAAACAAGGATGTAAAGAACCTAAGCAGCTGTGACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGACAATCAGGGGAGCTaGGTAATTCCCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLDNQGS*VIPTEG
Trigger: GCCCTCAGTGGGAATTACTCAGCTCCCCTGATTGTC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCATTTGCCATTGGCCTaGCAGCGGATGACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSHLPLA*QRMTLW
Trigger: CCAAAGGGTCATCCGCTGTCAGGCCAATGGCAAATG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCCCAAACGGATGCCATaGGCCGGGATCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPPKRMP*AGIPGS
Trigger: TGACCCTGGGATCCCGGCTCATGGCATCCGTTTGGG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAAACCAGGCCATCACTaGACACAACTCGGGCATTAC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAKPGHH*TQLGHY
Trigger: GTAATGCCCGAGTTGTGTTCAGTGATGGCCTGGTTT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGAGAAGGAGACAGATaGCCTGTAGGAGAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGEGDR*PVGEAS
Trigger: CGAGGCTTCTCCTACAGGTCATCTGTCTCCTTCTCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCAGAGCCTTGGTAGATaGAGGTGGCTCCGGAGGACT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFQSLGR*RWLRRT
Trigger: AGTCCTCCGGAGCCACCTTCATCTACCAAGGCTCTG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCCGCTGGCGTGGACCTaGCGAACACTATTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSPLAWT*RTLFSW
Trigger: CCAAGAAAATAGTGTTCGTCAGGTCCACGCCAGCGG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR TCA 90 bp ATAACACTGTATAGTCACACCAGAGCAGATACTGTAGCAGATACTGCAGCAGATGGCCTGGGGCTGTGCTaGGCCTCCTTTGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ITLYSHTRADTVADTAADGLGLC*ASFAWF
Trigger: GAACCAGGCAAAGGAGGCTCAGCACAGCCCCAGGCC...ATCTGCTGCAGTATCTGCTACAGTATCTGCTCTGGTGTGACTATACAGTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACGTGCAGTTGGAACGTaGAGTTCTGGCCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTRAVGT*SSGQLI
Trigger: GATCAGCTGGCCAGAACTGCACGTTCCAACTGCACG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAGAGAGGGTGGTGGCTaGACTAACAATGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSREGGG*TNNGGW
Trigger: CCAGCCACCATTGTTAGTGCAGCCACCACCCTCTCT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCCAGGATGGTCCATGTaGAGTCGGCATTGTTATGGT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAPGWSM*SRHCYG
Trigger: ACCATAACAATGCCGACTGCACATGGACCATCCTGG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCTTTTGGCATGTGATTaGCTTCTGTCCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLALLACD*LLSHQL
Trigger: GAGCTGGTGGGACAGAAGGCAATCACATGCCAAAAG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGATTAGATGGTGTCAGGGGTGGCAATGACGGTGAGCAGGAAATGTCTGGGTCTCTTTTGGCATGTGATTaGCTTCTGTCCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLDGVRGGNDGEQEMSGSLLACD*LLSHQL
Trigger: GAGCTGGTGGGACAGAAGGCAATCACATGCCAAAAG...AGACCCAGACATTTCCTGCTCACCGTCATTGCCACCCCTGACACCATCTAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGCAAGCCCTTCCGGATaGTGTAGGCTGGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPASPSG*CRLGPR
Trigger: CCGAGGTCCCAGCCTACAGCATCCGGAAGGGCTTGC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCAATCAAGCCACAGACTaGTGGATGTGCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCNQATD*WMCCSK
Trigger: CTTTGAACAGCACATCCAGCAGTCTGTGGCTTGATT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCGGACACGGAGCTCCCTaGAAAATGACCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETGHGAP*KMTFIM
Trigger: CATGATGAAGGTCATTTTGCAGGGAGCTCCGTGTCC...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGACACGGAGCTCCCTaGAAAATGACCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGHGAP*KMTFIM
Trigger: CATGATGAAGGTCATTTTGCAGGGAGCTCCGTGTCC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCAAGTCAGTGCTGAACTaGAGGACGACCGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETKSVLN*RTTELK
Trigger: CTTCAACTCGGTCGTCCTGCAGTTCAGCACTGACTT...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAAGTCAGTGCTGAACTaGAGGACGACCGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAKSVLN*RTTELK
Trigger: CTTCAACTCGGTCGTCCTGCAGTTCAGCACTGACTT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCTCCGACTCCCATTCTaGGGGATCCCAGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMLRLPF*GIPGSL
Trigger: CAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACGAGGAAGAGGCTGTTaGTGCTGCTTTCAATGCGGC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTRGRGC*CCFQCG
Trigger: GCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTGAAGCCTCTGGCTGGTaGGAGGCCTTTGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTEASGW*EAFGAE
Trigger: TTCAGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTC...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAACACTGCCCAGCCTCTTaGCATAGCGGGGTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKHCPAS*HSGVPA
Trigger: TGCCGGAACCCCGCTATGGCAAGAGGCTGGGCAGTG...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCAGGTTCCGGACAACTaGTCAGGCCCACCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLQVPDN*SGPPFC
Trigger: ACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGGCAGAAGGAGCATTGTGCCCTTAGGCAAGCACTCTCAATGAAAGACCTTGCTCAGCTCCCCTCACAATaGCATTGGCAAAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RQKEHCALRQALSMKDLAQLPSQ*HWQRAL
Trigger: CAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTG...AGCAAGGTCTTTCATTGAGAGTGCTTGCCTAAGGGCACAATGCTCCTTCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACAGCTCCCCTCACAATaGCATTGGCAAAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTQLPSQ*HWQRAL
Trigger: CAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGTGGGACATTGCGGTTaGTCCATAGGCCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTVGHCG*SIGLCP
Trigger: TGGACACAGGCCTATGGAGCAACCGCAATGTCCCAC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCACCAGAGTACGCTTaGCGATGCAGCTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPPEYA*RCSCTA
Trigger: TGCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCGGCTGCCACTGAGCTaGTGTTGGAAGCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFRLPLS*CWKQSG
Trigger: GCCACTTTGCTTCCAACAGCAGCTCAGTGGCAGCCG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCATGAAGCATCCTTCATaGGCACTTCTAGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCMKHPS*ALLVLK
Trigger: CTTCAAAACTAGAAGTGCGCATGAAGGATGCTTCAT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTCCTTGCTGCCGCTGTaGAGATGGGCCGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFSLLPL*RWAVHQ
Trigger: CTGATGAACGGCCCATCTGCACAGCGGCAGCAAGGA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTTCTCTCAAGGACCCTaGTGCTGCCCCCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFFSQGP*CCPQTW
Trigger: CCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGAGAA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGTACTGGGGCAGGCTTaGTCCCCTGTTCTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMVLGQA*SPVLSR
Trigger: CCTTGAGAGAACAGGGGAGCAAGCCTGCCCCAGTAC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGACACACAGGTGTCTTaGCTGGCTTTCCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLDTQVS*LAFQTW
Trigger: CCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGACACACAGGTGTCTTaGCTGGCTTTCCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTDTQVS*LAFQTW
Trigger: CCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAACCTGCCAGGTCTTTTaGTGGCTATGGTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTTCQVF*WLWSAA
Trigger: AGCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGAAGGGCCTCATCTaGCCTGTTCCCTTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFVKGLI*PVPFQA
Trigger: GGCTTGGAAGGGAACAGGGCAGATGAGGCCCTTCAC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGGAAATGTCTGGGTCTGAGCCTGGTGGGCTTTGTCCCAGTGGTGTCTCCTTGTTAGACCCTCCTTGTTaGATTGTATGTTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QEMSGSEPGGLCPSGVSLLDPPC*IVCSLG
Trigger: ACCCAGGGAACATACAATGCAACAAGGAGGGTCTAA...CAAGGAGACACCACTGGGACAAAGCCCACCAGGCTCAGACCCAGACATTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACAATGTACAAACAGCTaGCAAGTGCCCGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPQCTNS*QVPGES
Trigger: GCTTTCTCCGGGCACTTGGCAGCTGTTTGTACATTG...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTCCAGGGCAAAGGACTaGAACACAAGCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASRAKD*NTSWIL
Trigger: CAGAATCCAGCTTGTGTTCCAGTCCTTTGCCCTGGA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAGCCCGGAGAGAGGATaGTGCCGCTGGGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSPERG*CRWAKS
Trigger: TGACTTCGCCCAGCGGCACCATCCTCTCTCCGGGCT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCCATCATCTCAGAATaGCTAAAAACTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPIISE*LKTPSK
Trigger: TTTGCTGGGAGTTTTTAGCCATTCTGAGATGATGGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCACACTGGAACACTGTaGAGTCGCCGGCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMHTGTL*SRRLPN
Trigger: GTTGGGAAGCCGGCGACTCCACAGTGTTCCAGTGTG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTCACACTCCTTGCCTaGCGGGTAGGGTTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFVTLLA*RVGFWV
Trigger: TACCCAGAACCCTACCCGCCAGGCAAGGAGTGTGAC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGGGGGCTGTGCAGACTaGCCGGGGATTGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPGGCAD*PGIVPH
Trigger: GTGTGGAACAATCCCCGGCCAGTCTGCACAGCCCCC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGAGTGATTCTCCTGTATaGGAGCCCGAGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLSDSPV*EPEREL
Trigger: CAGCTCCCTCTCGGGCTCCCATACAGGAGAATCACT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAGTGGAAGCCTCTGGCTaGTGCGAGGCCTTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKVEASG*CEAFGA
Trigger: AGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTCCAC...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCTGACAACTTGGATCTaGATGCCAGCGCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFLTTWI*MPAPSG
Trigger: CCCCGAAGGCGCTGGCATCCAGATCCAAGTTGTCAG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGACAAAACTGACAACTTaGATCTGGATGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ISGATGVPNERGMGTEQMTKLTT*IWMPAP
Trigger: AGGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGT...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTATGTGGGCGTGGCCCTaGAGGGCATATCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPMWAWP*RAYPGS
Trigger: TGAGCCGGGATATGCCCTCCAGGGCCACGCCCACAT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCCTATGTAGTCGTGGTTaGGCTCGGTGGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETLCSRG*ARWRSS
Trigger: TGAACTTCTCCACCGAGCCCAACCACGACTACATAG...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTCCCATCATGCGGCTaGTCTCATAGGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSFPSCG*SHRGHS
Trigger: GGAATGGCCCCTATGAGACCAGCCGCATGATGGGAA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGAGAGGAGGGAGCTTaGAAGCTCGCTTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGEEGA*KLASTE
Trigger: TTCAGTGGAAGCGAGCTTCCAAGCTCCCTCCTCTCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGGCAGAAGGAGCATTGTGCCCTTAGGCAAGCACTCTCAATGAAAGACCTTGCTCTCCAGCTTGAATCCTaGCCGATTCTGGGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: RQKEHCALRQALSMKDLALQLES*PILGVV
Trigger: GACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAG...AGCAAGGTCTTTCATTGAGAGTGCTTGCCTAAGGGCACAATGCTCCTTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGGCTGCATCACGGTaGAACTTGAGCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFVAASR*NLSRTW
Trigger: CCAGGTCCTGCTCAAGTTCCACCGTGATGCAGCCAC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCTTGACAGAGAGGGATaGCTTCGCTCCACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLDREG*LRSTGG
Trigger: ACCACCTGTGGAGCGAAGCCATCCCTCTCTGTCAAG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTACACCATTCCATTCTTaGGGGCCTCAGGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSTPFHS*GPQEAH
Trigger: GTGGGCTTCCTGAGGCCCCCAAGAATGGAATGGTGT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCAGCTGTACATGGCCTTaGTTCCCACTGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRSCTWP*FPLCTP
Trigger: AGGAGTACACAGTGGGAACCAAGGCCATGTACAGCT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACACAGGGACACACTGTaGTGGGACATTGCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTHRDTL*WDIAVA
Trigger: AGCAACCGCAATGTCCCACCACAGTGTGTCCCTGTG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTGCACTCACGCACCCTaGAGCCCACCAGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMCTHAP*SPPVCI
Trigger: GATACACACTGGTGGGCTCCAGGGTGCGTGAGTGCA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTGCACTCACGCACCCTaGAGCCCACCAGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFCTHAP*SPPVCI
Trigger: GATACACACTGGTGGGCTCCAGGGTGCGTGAGTGCA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGCGCATCACAGTGCCTaGATCAAAGCTGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTAHHSA*IKAVPQ
Trigger: TTGGGGGACAGCTTTGATCCAGGCACTGTGATGCGC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGCGCATCACAGTGCCTaGATCAAAGCTGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSAHHSA*IKAVPQ
Trigger: TTGGGGGACAGCTTTGATCCAGGCACTGTGATGCGC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAGCACCAGAGGGGGATaGCAGGAGAAGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSTRGG*QEKETD
Trigger: ATCTGTCTCCTTCTCCTGCCATCCCCCTCTGGTGCT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCTGTATCCCAAACTGTaGCACACCAGGGTCCGCACA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLLYPKL*HTRVRT
Trigger: TGTGCGGACCCTGGTGTGCCACAGTTTGGGATACAG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCCAGGAATCAAGGCTTaGGTGAGCGGTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPPGIKA*VSGGSR
Trigger: CCGGGAGCCACCGCTCACCCAAGCCTTGATTCCTGG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATCCACAGGGAATTCTTaGCAAAAACATCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSTGNS*QKHPQE
Trigger: TTCCTGGGGATGTTTTTGCCAAGAATTCCCTGTGGA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTTGCTGTTGGCAACTTaGAAGCCAGTCACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLLLAT*KPVTLS
Trigger: GCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAAACTGCCCAAAGCCTTaGCCCTTGACAGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTNCPKP*PLTEPW
Trigger: CCAAGGCTCTGTCAAGGGCCAAGGCTTTGGGCAGTT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCAAAGTGGCGGCCAATaGACTCGGGGTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMQSGGQ*TRGLTP
Trigger: TGGAGTCAGACCCCGAGTCCATTGGCCGCCACTTTG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCTGTTGGAAGCAAAGTaGCGGCCAATGGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFLLEAK*RPMDSG
Trigger: CCCCGAGTCCATTGGCCGCCACTTTGCTTCCAACAG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATCATCAGCAGACAGCTaGTTTCTGCACGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTSSADS*FLHADR
Trigger: CCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGATGA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTTGACCTTGGGCTCCTaGCCAGACTCCTGCCCTATC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMLTLGS*PDSCPI
Trigger: GATAGGGCAGGAGTCTGGCCAGGAGCCCAAGGTCAA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTGGCATCCTGTCTaGGCCACAGACTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRTWHPV*ATDLSS
Trigger: AGAAGACAAGTCTGTGGCCCAGACAGGATGCCAAGT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCACAGGTGTCTTGCCTaGCTTTCCAGACCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFHRCLA*LSRPGH
Trigger: GTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTGTG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGTCTTTTGCTGGCTATaGTCAGCGGCTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMVFCWL*SAAAGS
Trigger: GCTCCCAGCAGCCGCTGACCATAGCCAGCAAAAGAC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGCCAGGTCTTTTGCTaGCTATGGTCAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLCQVFC*LWSAAA
Trigger: AGCAGCCGCTGACCATAGCCAGCAAAAGACCTGGCA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGAGTGTGAGTGTGTCTaGATTGGCCCTCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSECECV*IGPLPP
Trigger: TGGAGGGAGAGGGCCAATCCAGACACACTCACACTC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTCCCTTCCAAGCCTCTaGAGGTGGAGAGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRSLPSL*RWREMS
Trigger: TGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCCCACATTGCACTCACCCTGGACGATAGCTCCTGGGAATGGCAGTCACAGCTGCAGAGCCTTAAAGCCTaGATTTCATTAGTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: SHIALTLDDSSWEWQSQLQSLKA*ISLVER
Trigger: TCGCTCCACTAATGAAATCCAGGCTTTAAGGCTCTG...CAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAACCGAGGTTGAAGGTTaGACCCTGCTGGATGCCATT +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTTEVEG*TLLDAI
Trigger: AATGGCATCCAGCAGGGTTCAACCTTCAACCTCGGT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCTTGGTATTGGGCACTaGATCCGCGCTGCCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPLGIGH*IRAAGG
Trigger: ACCACCGGCAGCGCGGATTCAGTGCCCAATACCAAG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGCATTGTTGTCATACTaGATGGGGAAATTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAALLSY*MGKLGE
Trigger: CTCCCCCAATTTCCCCATTCAGTATGACAACAATGC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGCTGGCACTCAAACTTaGGTGTGTCACCGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSAGTQT*VCHRGE
Trigger: TTCACCACGGTGACACACTCAAGTTTGAGTGCCAGC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCTGGGCGAAGTCAGGTaGCCACCACAGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPLGEVR*PPQGAS
Trigger: TGAAGCTCCCTGTGGTGGTCACCTGACTTCGCCCAG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACACTGGAGCCTTGAATaGAGCCACCACAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTHWSLE*SHHREL
Trigger: AAGCTCTCTGTGGTGGCTTCATTCAAGGCTCCAGTG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGTCCCACTGGAGCCTTaGATGAAGCCACCACAGAGA +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMVPLEP*MKPPQR
Trigger: TCTCTGTGGTGGCTTCATTCAAGGCTCCAGTGGGAC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTATCCAGGGTCACAGCTaGAGGACACGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPIQGHS*RTRSSL
Trigger: CAGGGAGCTCCGTGTCCTTCAGCTGTGACCCTGGAT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGATGCGCAGCACGTCGTaGACCTCCTCTGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMMRSTS*TSSVSN
Trigger: GTTTGACACAGAGGAGGTTCACGACGTGCTGCGCAT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCGTGGACACTGAAAATTaGATGGCAAAGCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETVDTEN*MAKPCL
Trigger: CAAGCAGGGCTTTGCCATTCAATTTTCAGTGTCCAC...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCGATCTTCACACAGCTaGTCTCTGCACTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLRSSHS*SLHFPA
Trigger: TGCAGGGAAGTGCAGAGATCAGCTGTGTGAAGATCG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCATTCTGGGTAATTTGGTaGGAGGATGACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPFWVIW*EDDSRW
Trigger: CCATCTGGAGTCATCCTCTCACCAAATTACCCAGAA...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGATGACGTAGTCTGGTaGGACGGTCACTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSDDVVW*DGHFPV
Trigger: GACTGGAAAGTGACCGTCTCACCAGACTACGTCATC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATTTCTGTATAGTCAATaGCGAAGCCAGCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGFLYSQ*RSQHCS
Trigger: TGAGCAATGCTGGCTTCGTCATTGACTATACAGAAA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATTGGCTGTGGCCGTCGTaGACCTCCACCACGTCGTTG +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHWLWPS*TSTTSL
Trigger: CAACGACGTGGTGGAGGTTCACGACGGCCACAGCCA...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCAGCCCGAGAGGGAGCTaGGGAGCCGCGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVSPRGS*GAASAG
Trigger: GCCAGCACTCGCGGCTCCTCAGCTCCCTCTCGGGCT...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATTGCCCCTGCGCTCTGTaGGGTTGCCTCCACACGGCA +
Preference number: 4 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNCPCAL*GCLHTA
Trigger: TGCCGTGTGGAGGCAACCTCACAGAGCGCAGGGGCA...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCAGAGGACTCTGTCCTaGTGGACCATCAAAAATCTC +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRQRTLS*WTIKNL
Trigger: GAGATTTTTGATGGTCCATCAGGACAGAGTCCTCTG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAGTTGCTTGAGCTGGTaGCAATCAGGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSCLSW*QSGELS
Trigger: ACTCAGCTCCCCTGATTGTCACCAGCTCAAGCAACT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCACAGGAAAGAGCTTaGCAGAGAGGGATGGCTTCG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPQERA*QRGMAS
Trigger: CGAAGCCATCCCTCTCTGTCAAGCTCTTTCCTGTGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAGCTGGGCCTGGAACTaGTACTGTGTCTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASWAWN*YCVSKI
Trigger: TATCTTTGAGACACAGTATCAGTTCCAGGCCCAGCT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCAGTTTTGTTGTACCTaGAGTCATTGCCCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRQFCCT*SHCPAE
Trigger: TTCGGCTGGGCAATGACTTCAGGTACAACAAAACTG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCCTTCCCATTGGGGATaGGCGGAGGTGGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPPSHWG*AEVACT
Trigger: TGTGCAAGCCACCTCCGCTCATCCCCAATGGGAAGG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGAGAAGGAGACAGATaGCCTGTAGGAGAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGEGDR*PVGEAS
Trigger: CGAGGCTTCTCCTACAGGTCATCTGTCTCCTTCTCC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCATCTAAAGCCCAGTaGTCATCTTTGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPSKAQ*SSLNLF
Trigger: GAATAAGTTCAAAGATGATCACTGGGCTTTAGATGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACTGAGGTCCAGTCTTTaGAAGCCGAACTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLRSSL*KPNCPK
Trigger: CTTTGGGCAGTTCGGCTTTCAAAGACTGGACCTCAG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCGGGTTTCTGCACTCTaGCCGCATGATGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMRVSAL*PHDGMC
Trigger: ACACATCCCATCATGCGGTCAGAGTGCAGAAACCCG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTTTCAATATGTGACATaGATCTCTGAGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCFQYVT*ISEASM
Trigger: CATGCTGGCCTCAGAGATTCATGTCACATATTGAAA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAGGGGTGCGGAGGGTaGTGCCCAGCAGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQGCGG*CPAECW
Trigger: CCAGCACTCTGCTGGGCATCACCCTCCGCACCCCTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCCCCAAATGTCAGGAGCACTTGTTCTCAGTGCTACAGTCGACATTCCTGCCAGAGGGTAAGACGGTGTTaGAGAGCATCCCCAAATGTC +
Preference number: 4 (lower is better)
Translates to: SPNVRSTCSQCYSRHSCQRVRRC*RASPNV
Trigger: GACATTTGGGGATGCTCTTCAACACCGTCTTACCCT...CTGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTGACATTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGAGTGGAGCTTGGTCTaGGTGGCAAGGCAGCGGACT +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPEWSLV*VARQRT
Trigger: AGTCCGCTGCCTTGCCACTCAGACCAAGCTCCACTC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR TCA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCGAGGGGCATGGGAACTaGGCAGATGGAGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: FIKALIPFMRALLSDLIAEGHGN*ADGEGG
Trigger: TCCGCCCTCTCCATCTGCTCAGTTCCCATGCCCCTC...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGCTGGATTCTGTGCTaGTCTTCCGCGGTGATGGTC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSWILC*SSAVMV
Trigger: GACCATCACCGCGGAAGAGCAGCACAGAATCCAGCT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTACAAGCTGGATTCTGTaGTGCTCTTCCGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSTSWIL*CSSAVM
Trigger: CATCACCGCGGAAGAGCAGCACAGAATCCAGCTTGT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAACAAGCTGGATTCTGTaGTGCTCTTCCGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTTSWIL*CSSAVM
Trigger: CATCACCGCGGAAGAGCAGCACAGAATCCAGCTTGT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCCGAGCCTAGTCTTTTaGCCCTTTCGGGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMPSLVF*PFRVCQ
Trigger: CTGGCATACCCGAAAGGGGCAAAAGACTAGGCTCGG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCAGGGTCACCGCAACTaGCCTGCTCGATCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFQGHRN*PARSLH
Trigger: ATGAAGAGATCGAGCAGGGCAGTTGCGGTGACCCTG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTTCGGAGAGTTCGAATaGCCTGGCTTTCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAFGEFE*PGFQLN
Trigger: ATTCAGCTGAAAGCCAGGGCATTCGAACTCTCCGAA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAGCTCAGGGTCGAGGTaGCCTCAACTTCGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSSGSR*PQLRSP
Trigger: GGGGCTACGAAGTTGAGGGCACCTCGACCCTGAGCT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGAAGCCTCTGGCTGGTaGGAGGCCTTTGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPEASGW*EAFGAE
Trigger: TTCAGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGCAGTCACAGCTGCTTAGGTTCTTTACATCCTTGTTTCTCTCTGTTGCTTCCCCACCGAGAAGTCACTaGCCAGCCTCTTGCCATAGC +
Preference number: 4 (lower is better)
Translates to: WQSQLLRFFTSLFLSVASPPRSH*PASCHS
Trigger: GCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGG...GGAAGCAACAGAGAGAAACAAGGATGTAAAGAACCTAAGCAGCTGTGACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTAGAGCTGGTTGGAGGTaGTGTTCAGAAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFRAGWR*CSEGQA
Trigger: TGCCTGCCCTTCTGAACAGCACCTCCAACCAGCTCT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATAACACTGTATAGTCACACCAGAGCAGATACTGTAGCAGATACTGCAGCAGATGCACTGTTCCGGGCATaGAGGAGATGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: ITLYSHTRADTVADTAADALFRA*RRCGRG
Trigger: GCCACGCCCACATCTCCTGCATGCCCGGAACAGTGC...ATCTGCTGCAGTATCTGCTACAGTATCTGCTCTGGTGTGACTATACAGTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGCACTGTTCCGGGCATaGAGGAGATGTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLALFRA*RRCGRG
Trigger: GCCACGCCCACATCTCCTGCATGCCCGGAACAGTGC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCCAGAGGGCTCTGTCTaGAGCAGGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPPEGSV*SRLRLR
Trigger: CCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCTGG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAGCCGTGGTGCTGTTTaGTGTGGCCCATCCCAGATG +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTSRGAV*CGPSQM
Trigger: CATCTGGGATGGGCCACAGCAAACAGCACCACGGCT...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGTAGGTTCCAAGTTTaGAGGTCAGAATTTCATTCC +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCGRFQV*RSEFHS
Trigger: GGAATGAAATTCTGACCTGCAAACTTGGAACCTACC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGTGGTAGCCTTCACTaGAGCTGTACATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFGGSLH*SCTWPW
Trigger: CCAAGGCCATGTACAGCTGCAGTGAAGGCTACCACC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGTGGTAGCCTTCACTaGAGCTGTACATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGGSLH*SCTWPW
Trigger: CCAAGGCCATGTACAGCTGCAGTGAAGGCTACCACC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCCCCGAGGCTCCATTTaGCATTGGCCTGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPPRGSI*HWPDSG
Trigger: TCCGCTGTCAGGCCAATGGCAAATGGAGCCTCGGGG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGAGAAGATGGCTGTTaGCCCGTAGACAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGEDGC*PVDRQC
Trigger: ACACTGTCTGTCTACGGGGCAACAGCCATCTTCTCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGGAGAAGATGGCTGTTaGCCCGTAGACAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSGEDGC*PVDRQC
Trigger: ACACTGTCTGTCTACGGGGCAACAGCCATCTTCTCC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAGAGCCCATTGGCCATaGACTCACGCACCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPRAHWP*THAPWS
Trigger: GCTCCAGGGTGCGTGAGTGCATGGCCAATGGGCTCT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTATGTCCGGTCCTTGGTaGAGCTCAGCACAGATACTC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSMSGPW*SSAQIL
Trigger: GAGTATCTGTGCTGAGCTGCACCAAGGACCGGACAT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCTGAGCATGGCTGGCTaGTTCTTCCCCTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLSMAG*FFPWYS
Trigger: TGAATACCAGGGGAAGAAGCAGCCAGCCATGCTCAG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCACAGATCCACAAGTTaGTTTGCTATTTTAAATCCA +
Preference number: 4 (lower is better)
Translates to: PGELNPCPEAAYAETAEPHRSTS*FAILNP
Trigger: TGGATTTAAAATAGCAAAGCAACTTGTGGATCTGTG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTCCTTGCCCCGAAGCTaGCTACGCGGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSLPRS*LRGDSR
Trigger: TCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTTCCAATCTAGAATTTaGTTAAGAACCAGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRFQSRI*LRTRCR
Trigger: GCGACACCTGGTTCTTAAGCAAATTCTAGATTGGAA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAGCCTCCATTGTGTCTaGTGGAAATGGACGCCTCTC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSLHCV*WKWTPL
Trigger: GAGAGGCGTCCATTTCCAGCAGACACAATGGAGGCT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTGCCCCACCAGCAGGTaGTCCTCGAGCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPCPTSR*SSSISW
Trigger: CCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCTTAACCCCCATCAGCTaGATCCAGAAAGCAACTCAC +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETLTPIS*IQKATH
Trigger: GTGAGTTGCTTTCTGGATGCAGCTGATGGGGGTTAA...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTATTCTCTGGCTGGGGTaGACCATCAAACACCGACAG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSILWLG*TIKHRQ
Trigger: CTGTCGGTGTTTGATGGTCCACCCCAGCCAGAGAAT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCAGTCGGCATTGTTATaGTACTCCGAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLQSALL*YSEGKW
Trigger: CCACTTCCCCTCGGAGTACCATAACAATGCCGACTG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGATTTGCTTCTTGACTTaGTATTGGGCACTGAATCCG +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEICFLT*YWALNP
Trigger: CGGATTCAGTGCCCAATACCAAGTCAAGAAGCAAAT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCATTTGCTTCTTGACTTaGTATTGGGCACTGAATCCG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCICFLT*YWALNP
Trigger: CGGATTCAGTGCCCAATACCAAGTCAAGAAGCAAAT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGGTATGCCAGGGTCTaGACACATATTATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGYARV*THIMSL
Trigger: CAAGGACATAATATGTGTCCAGACCCTGGCATACCC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGTTGCCATAGTCCTCTaGGTAGTTGGGAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTVAIVL*VVGRQD
Trigger: GTCCTGTCTCCCAACTACCCAGAGGACTATGGCAAC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCTGGATCCAGACAGTaGTCTGACTGCAGTGTTATA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPGSRQ*SDCSVI
Trigger: TATAACACTGCAGTCAGACCACTGTCTGGATCCAGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGAAGTCAGGGAACCCTaGCGACAAGATGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFEVREP*RQDGPT
Trigger: AGTGGGACCATCTTGTCGCCAGGGTTCCCTGACTTC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAGCTGCCTCAGGGGCTaGGTGAAGCTGCCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSCLRG*VKLPFS
Trigger: TGAGAACGGCAGCTTCACCCAGCCCCTGAGGCAGCT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCAGAGTTCGAATGCCCTaGCTTTCAGCTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETRVRMP*LSAEFP
Trigger: AGGGAATTCAGCTGAAAGCCAGGGCATTCGAACTCT...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCAGAGTTCGAATGCCCTaGCTTTCAGCTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRRVRMP*LSAEFP
Trigger: AGGGAATTCAGCTGAAAGCCAGGGCATTCGAACTCT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCAAACTTGGGGGTTCCTaGGTCCTCACATTTGATGAG +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETKLGGS*VLTFDE
Trigger: CTCATCAAATGTGAGGACCCAGGAACCCCCAAGTTT...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAAACTTGGGGGTTCCTaGGTCCTCACATTTGATGAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAKLGGS*VLTFDE
Trigger: CTCATCAAATGTGAGGACCCAGGAACCCCCAAGTTT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCTTGTAGCCAAACTTaGGGGTTCCTGGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPCSQT*GFLGPH
Trigger: GTGAGGACCCAGGAACCCCCAAGTTTGGCTACAAGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATTGCTATGCAGGTCCTTaGGCAGGGCCGGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHCYAGP*AGPGHS
Trigger: TGAGTGGCCCGGCCCTGCCCAAGGACCTGCATAGCA...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAGGGGGCTGTGCAGACTaGCCGGGGATTGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPGGCAD*PGIVPH
Trigger: GTGTGGAACAATCCCCGGCCAGTCTGCACAGCCCCC...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTATTCGAAGCGGACGATaGCCCCCACCGAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTIRSGR*PPPRSH
Trigger: GTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAAT...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTGTTGAGGTACGGCTCTaGGAAGCCAGGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTVEVRL*EARGQD
Trigger: ATCCTGTCCCCTGGCTTCCCAGAGCCGTACCTCAAC...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGAAGGTAGAGCTGGTTaGAGGTGCTGTTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLEGRAG*RCCSEG
Trigger: CCCTTCTGAACAGCACCTCCAACCAGCTCTACCTTC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGAAGGTAGAGCTGGTTaGAGGTGCTGTTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSEGRAG*RCCSEG
Trigger: CCCTTCTGAACAGCACCTCCAACCAGCTCTACCTTC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGAGAGGAGGGAGCTTaGAAGCTCGCTTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGEEGA*KLASTE
Trigger: TTCAGTGGAAGCGAGCTTCCAAGCTCCCTCCTCTCC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAATACACGGTGGTCTCGTaGGACGTGGAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKYTVVS*DVERRE
Trigger: CTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTA...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTGGGAGTGGTCGCTGTaGAAATACACGGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMWEWSL*KYTVVS
Trigger: CGAGACCACCGTGTATTTCCACAGCGACCACTCCCA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAAATCCTGGCCGATTCTaGGAGTGGTCGCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTNPGRF*EWSLWK
Trigger: TTTCCACAGCGACCACTCCCAGAATCGGCCAGGATT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCTCCAGCTTGAATCCTaGCCGATTCTGGGAGTGGTC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFLQLES*PILGVV
Trigger: GACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAATTGGCAAAGGGCTCTaGGTCTGGGCACTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTIGKGL*VWALLK
Trigger: CTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAAT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATCACTTGGGCAGGGGGTaGTCCCAGTTCCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHHLGRG*SQFRLV
Trigger: CACCAACCGGAACTGGGACCACCCCCTGCCCAAGTG...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp AGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTGAAGACGCCGAGCCGTaGTGCTGTTTGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RLQCGDSVGLFYKGTNPIEDAEP*CCLLWP
Trigger: GGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTC...AATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCAACTTGAGCAGGACCTaGTTGGATGAACTCTGCACT +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETNLSRT*LDELCT
Trigger: AGTGCAGAGTTCATCCAACCAGGTCCTGCTCAAGTT...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGGCTGGGTGCTGGTCTaGCCTAGGATGAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPGWVLV*PRMKPW
Trigger: CCATGGCTTCATCCTAGGCCAGACCAGCACCCAGCC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCACTGCAGCTGTACATaGCCTTGGTTCCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLHCSCT*PWFPLC
Trigger: ACACAGTGGGAACCAAGGCCATGTACAGCTGCAGTG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCACAGGGACACACTGTaGTGGGACATTGCGGTTGCT +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMHRDTL*WDIAVA
Trigger: AGCAACCGCAATGTCCCACCACAGTGTGTCCCTGTG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCACTCCAGAGCCCATTaGCCATGCACTCACGCACCC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPHSRAH*PCTHAP
Trigger: GGGTGCGTGAGTGCATGGCCAATGGGCTCTGGAGTG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAAGCCAGCATTGCATTaGTACACCACACTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMKPALH*YTTLPR
Trigger: CCGGGGCAGTGTGGTGTACCAATGCAATGCTGGCTT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGCACCAGAGGGGGATaGCAGGAGAAGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSTRGG*QEKETD
Trigger: ATCTGTCTCCTTCTCCTGCCATCCCCCTCTGGTGCT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGACGTTGGCATGCGTTaGCGTCTCTGGCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPDVGMR*RLWLPA
Trigger: TGCAGGCAGCCAGAGACGCCAACGCATGCCAACGTC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTAGCTCCACGCCACTGTaGTCGATCATGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFSSTPL*SIMVAL
Trigger: CAATGCCACCATGATCGACCACAGTGGCGTGGAGCT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCACTCGCAAGGAGCTaGAGAGGTGTGACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPLARS*RGVTFS
Trigger: GCTGAAAGTCACACCTCTCCAGCTCCTTGCGAGTGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCCAAGCCTCTGGAGGTaGAGAGAAATGTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMPSLWR*REMSGV
Trigger: CACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAATATGGCGTAGATGGTaGGTGAAGGGCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTIWRRW*VKGLIC
Trigger: GCAGATGAGGCCCTTCACCCACCATCTACGCCATAT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTATGGTGATGGGTATATaGCGTAGATGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAMVMGI*RRWWVK
Trigger: CTTCACCCACCATCTACGCCATATACCCATCACCAT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGGAGCACTTGTTCTCAGTGCTACAGTCGACATTCCTGCCAGAAATAAGGACCCTTACACACGCAGCCTaGCTTCTTAGCCGACCATTG +
Preference number: 4 (lower is better)
Translates to: QEHLFSVLQSTFLPEIRTLTHAA*LLSRPL
Trigger: CAATGGTCGGCTAAGAAGCCAGGCTGCGTGTGTAAG...GGTCCTTATTTCTGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp GGATTAGATGGTGTCAGGGGTGGCAATGACGGTGAGCAGGAAATGTCTGGGTCTGTTACTGGAGGCTGGTaGTGTCTACAGCCTTACAAA +
Preference number: 4 (lower is better)
Translates to: GLDGVRGGNDGEQEMSGSVTGGW*CLQPYK
Trigger: TTTGTAAGGCTGTAGACACCACCAGCCTCCAGTAAC...AGACCCAGACATTTCCTGCTCACCGTCATTGCCACCCCTGACACCATCTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTACCGAGGTTGAAGGTTaGACCCTGCTGGATGCCATT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFTEVEG*TLLDAI
Trigger: AATGGCATCCAGCAGGGTTCAACCTTCAACCTCGGT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCCCCAAATGTCAGGAGCACTTGTTCTCAGTGCTACAGTCGACATTCCTGCCACTTCATAAGAAGCCTTaGATCCCAGGGAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: IPKCQEHLFSVLQSTFLPLHKKP*IPGNCH
Trigger: GTGGCAGTTCCCTGGGATTCAAGGCTTCTTATGAAG...TGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTGACATTTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACTTCATAAGAAGCCTTaGATCCCAGGGAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLHKKP*IPGNCH
Trigger: GTGGCAGTTCCCTGGGATTCAAGGCTTCTTATGAAG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTATTCTTTTGGCATGTaGTTGCCTTCTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRYSFGM*LPSVPP
Trigger: TGGTGGGACAGAAGGCAATCACATGCCAAAAGAATA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACCCGATCAAGGGCGCTaGGTAAGTCCGCCCATCGCG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPPDQGR*VSPPIA
Trigger: CGCGATGGGCGGACTTACTCAGCGCCCTTGATCGGG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAACACACCCTTGCCATaGGATGTTTCGATAATCCAG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLANTPLP*DVSIIQ
Trigger: CTGGATTATCGAAACATCTCATGGCAAGGGTGTGTT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAAATCCAGGGTCACAGCTaGAGGACACGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQIQGHS*RTRSSL
Trigger: CAGGGAGCTCCGTGTCCTTCAGCTGTGACCCTGGAT...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGATGACGTAGTCTGGTaGGACGGTCACTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFDDVVW*DGHFPV
Trigger: GACTGGAAAGTGACCGTCTCACCAGACTACGTCATC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCTCCACCACGTCGTTaGGGGCCGTGTGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLPPPRR*GPCERR
Trigger: CCTTCTTTCACACGGCCCTCAACGACGTGGTGGAGG...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCACACACGTGGGCGCTaGGACATTCCATTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPHTRGR*DIPLGQ
Trigger: TTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATGCCCCTGCGCTCTGTaGGGTTGCCTCCACACGGCA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPCPCAL*GCLHTA
Trigger: TGCCGTGTGGAGGCAACCTCACAGAGCGCAGGGGCA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCAGATACGCTGATATCTaGGTAGAAATGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCRYADI*VEMKVE
Trigger: CTCTACCTTCATTTCTACTCAGATATCAGCGTATCT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTCCTGATACTCCAGCTTaGATCCTGGCCGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTPDTPA*ILADSG
Trigger: CCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGG...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATGGGTGGCCAGTCAATTaGTACCCCGGGAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNGWPVN*YPGRHS
Trigger: CGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCC...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCACGGTTGGTGCCATGTTaGCACGTGAGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPRLVPC*HVRTGW
Trigger: CCACCCTGTCCTCACGTGTCAACATGGCACCAACCG...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TGGCAGTCACAGCTGCTTAGGTTCTTTACATCCTTGTTTCTCTCTGTTGCTTCCTGCCGTTGGAAGAAGTaGTGTTCCCGCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: WQSQLLRFFTSLFLSVASCRWKK*CSRHKG
Trigger: TCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCA...GGAAGCAACAGAGAGAAACAAGGATGTAAAGAACCTAAGCAGCTGTGACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGGCCAATGGGCACGGTaGTCAGCCAGACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLGQWAR*SARHSP
Trigger: AGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGGAAGTACTCCACTGTaGGGGAGATGTTATAGTCGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLGSTPL*GRCYSR
Trigger: CCGACTATAACATCTCCCTCACAGTGGAGTACTTCC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGTAGGCGTGATCAGATaGCCAACGCAGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMVGVIR*PTQVHR
Trigger: TCTGTGTACCTGCGTTGGTCATCTGATCACGCCTAC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCTGAATAGCGGATCTTaGAGCCCTTCCGATTGTAGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLLNSGS*SPSDCR
Trigger: CCTACAATCGGAAGGGCTTCAAGATCCGCTATTCAG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGAAACCAGGCCATCACTaGACACAACTCGGGCATTAC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLKPGHH*TQLGHY
Trigger: GTAATGCCCGAGTTGTGTTCAGTGATGGCCTGGTTT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCACAGATACTCTATGTaGCTCCATCATATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRHRYSM*LHHIAR
Trigger: CCTGGCTATATGATGGAGTCACATAGAGTATCTGTG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGCATAAGTCACACTTaGGCCCCACATGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGISHT*APHEVR
Trigger: TCTGACTTCATGTGGGGCTCAAGTGTGACTTATGCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGATCGCGGCTGCCACTaGGCTGCTGTTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPDRGCH*AAVGSK
Trigger: TTTGCTTCCAACAGCAGCTCAGTGGCAGCCGCGATC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGTGACATGAATCTCTaGGGCCAGCATGTCACACGT +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLCDMNL*GQHVTR
Trigger: ACGTGTGACATGCTGGCCTCAGAGATTCATGTCACA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGATTAGATGGTGTCAGGGGTGGCAATGACGGTGAGCAGGAAATGTCTGGGTCTCTCAGTCTTAGACTTTaGGTTTCCACACTTAGACCC +
Preference number: 4 (lower is better)
Translates to: GLDGVRGGNDGEQEMSGSLSLRL*VSTLRP
Trigger: GGGTCTAAGTGTGGAAACTCAAAGTCTAAGACTGAG...AGACCCAGACATTTCCTGCTCACCGTCATTGCCACCCCTGACACCATCTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGCCTTGGGCACTGACTaGATAGTCGCTGATGAGGCG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPALGTD*IVADEA
Trigger: CGCCTCATCAGCGACTATGCAGTCAGTGCCCAAGGC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGAAGAAGCCAAGGTTaGAGCTGTAGCGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGRSQG*SCSGPC
Trigger: ACAAGGTCCGCTACAGCTGCAACCTTGGCTTCTTCC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCCATCCGATGTGAAGTaGAGTCGCAGCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMPSDVK*SRSQFL
Trigger: CAAGAACTGGCTGCGACTGCACTTCACATCGGATGG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCATCCGATGTGAAGTaGAGTCGCAGCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPSDVK*SRSQFL
Trigger: CAAGAACTGGCTGCGACTGCACTTCACATCGGATGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTCTGGCTGTTGTCTTTaGTGGGCATCAGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSGCCL*WASASH
Trigger: GTGTGAAGCTGATGCCCAGCAAAGACAACAGCCAGA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTGCCCCTTTCGGGTATaGCAGGGTCTGGACACATAT +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMCPFRV*QGLDTY
Trigger: ATATGTGTCCAGACCCTGGCATACCCGAAAGGGGCA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AATAAGGACCCCACCAGCAACGTTCCGAGGAGTAGAATAAACCAACCAGAGTGCCTTGGAGGGGTTGAGTaGTGTGATGATCCACACACA +
Preference number: 4 (lower is better)
Translates to: NKDPTSNVPRSRINQPECLGGVE*CDDPHT
Trigger: TGTGTGTGGATCATCACAGCACTCAACCCCTCCAAG...GCACTCTGGTTGGTTTATTCTACTCCTCGGAACGTTGCTGGTGGGGTCCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCTTTTGGCATGTGATTaGCTTCTGTCCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLLLACD*LLSHQL
Trigger: GAGCTGGTGGGACAGAAGGCAATCACATGCCAAAAG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGGTTTCCTGAGAAGGTaGCCAGGACGGGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPGFLRR*PGRAPR
Trigger: CCGAGGCGCCCGTCCTGGGCACCTTCTCAGGAAACC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTGTCCCCAAACCGTTTaGCATTTACTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSCPQTV*HLLERQ
Trigger: CTGGCGTTCCAGTAAATGGCAAACGGTTTGGGGACA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATGTCCCCAAACCGTTTaGCATTTACTGGAACGCCAG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTCPQTV*HLLERQ
Trigger: CTGGCGTTCCAGTAAATGGCAAACGGTTTGGGGACA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCATCAAAGCTGGAAAAGTaGAGTTCAAAGCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPSKLEK*SSKPLL
Trigger: CAGCAAGGGCTTTGAACTGCACTTTTCCAGCTTTGA...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGGACACGGAGCTCCCTaGAAAATGACCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSGHGAP*KMTFIM
Trigger: CATGATGAAGGTCATTTTGCAGGGAGCTCCGTGTCC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAGGTGCAGCCGGCCTCTaGTTCGATGGTCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPGAAGL*FDGPDA
Trigger: TGCATCTGGACCATCGAAGCAGAGGCCGGCTGCACC...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCACAGGCCCATCCCAGATaGGCAGCACGTCGTGAACCT +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPQAHPR*AARREP
Trigger: AGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTG...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGAAGTCAGTGCTGAACTaGAGGACGACCGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLKSVLN*RTTELK
Trigger: CTTCAACTCGGTCGTCCTGCAGTTCAGCACTGACTT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGTTGGCGGGCTGGGCTaGCAGAAGAACCTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLVGGLG*QKNLFS
Trigger: CGAGAACAGGTTCTTCTGGCAGCCCAGCCCGCCAAC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTAGCTCAGGGTCGAGGTaGCCTCAACTTCGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLSSGSR*PQLRSP
Trigger: GGGGCTACGAAGTTGAGGGCACCTCGACCCTGAGCT...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp GTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGGGGCATAGCCGGAGTTaGATTCGAAGCGGACGATGG +
Preference number: 4 (lower is better)
Translates to: VILWVSFIKALIPFMRALGHSRS*IRSGRW
Trigger: CCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCC...CAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTCAACTTGGATCTGGATaGCAGCGCCTTCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LWVSFIKALIPFMRALLSQLGSG*QRLRGP
Trigger: TGGTCCCCGAAGGCGCTGGCATCCAGATCCAAGTTG...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCCCAGAGGGCTCTGTCTaGAGCAGGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: FIKALIPFMRALLSDLIAPEGSV*SRLRLR
Trigger: CCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCTGG...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACCAGAGGGCTCTGTCTaGAGCAGGCTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQPEGSV*SRLRLR
Trigger: CCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCTGG...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGCCCACACATGCGGGTaGTGTTTCCCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPAHTCG*CFPPEY
Trigger: GTACTCTGGTGGGAAACAGCACCCGCATGTGTGGGC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGCCTTGCAGGTGCGGTaGTCGGAGCCACCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPALQVR*SEPPLR
Trigger: CCTCAAGGGTGGCTCCGAGCACCGCACCTGCAAGGC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCAGACCTGGCCACAGTaGTACTGTAGAGATTCATCG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLQTWPQ*YCRDSS
Trigger: CGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCAGACCTGGCCACAGTaGTACTGTAGAGATTCATCG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSQTWPQ*YCRDSS
Trigger: CGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCTGTCCCTCCGCTCCTaGACATTTCTATTTGCTATT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLSLRS*TFLFAI
Trigger: AATAGCAAATAGAAATGTGCAGGAGCGGAGGGACAG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCTGTCCCTCCGCTCCTaGACATTTCTATTTGCTATT +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLALSLRS*TFLFAI
Trigger: AATAGCAAATAGAAATGTGCAGGAGCGGAGGGACAG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGGAAATGTCTGGGTCTGAGCCTGGTGGGCTTTGTCCCAGTGGTGTCTCCTTGTGTCTTCTGTCCTTATaGAAATTTGATCACATGGGC +
Preference number: 4 (lower is better)
Translates to: QEMSGSEPGGLCPSGVSLCLLSL*KFDHMG
Trigger: GCCCATGTGATCAAATTTGCATAAGGACAGAAGACA...CAAGGAGACACCACTGGGACAAAGCCCACCAGGCTCAGACCCAGACATTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp ACCAAGAAGGGTAAGACGGTGTTGAAGAGCATCCCCAAATGTCAGGAGCACTTGCGGAAAGTCAGATTTTaGTGCCCAAAGCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TKKGKTVLKSIPKCQEHLRKVRF*CPKPSA
Trigger: AGCTGAGGGCTTTGGGCAGCAAAATCTGACTTTCCG...CAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGTCTTACCCTTCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAGCATGTCACTCCATTaGCCGCTGGCCAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSMSLH*PLARHW
Trigger: CCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGGTCTTAGTGTGTTTCTaGAAGTGCACGCATGATGTA +
Preference number: 4 (lower is better)
Translates to: ISGATGVPNERGMGTEQMVLVCF*KCTHDV
Trigger: TACATCATGCGTGCACTTGCAGAAACACACTAAGAC...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGACCTTTTATACTCTGTaGCTGGAGCTAAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: ISGATGVPNERGMGTEQMTFYTL*LELRIS
Trigger: GGAAATCCTTAGCTCCAGGCACAGAGTATAAAAGGT...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp GACAGACAAAGTTACATAGCTTGCATGTGTCAGAGCCAAGGTTTGAACCCGTCTGTGCTGAGCCTCCTTTaGCTGGTTCTGGTACAGGTG +
Preference number: 4 (lower is better)
Translates to: DRQSYIACMCQSQGLNPSVLSLL*LVLVQV
Trigger: CACCTGTACCAGAACCAGGCAAAGGAGGCTCAGCAC...AGACGGGTTCAAACCTTGGCTCTGACACATGCAAGCTATGTAACTTTGTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTGCAGTTGGCGTAATTaGGGTAGCCATATGGGAACC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSCSWRN*GSHMGT
Trigger: GGTTCCCATATGGCTACCCCAATTACGCCAACTGCA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGCAGTTGGCGTAATTaGGGTAGCCATATGGGAACC +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLCSWRN*GSHMGT
Trigger: GGTTCCCATATGGCTACCCCAATTACGCCAACTGCA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTGGTCCACGTGCAGTTaGCGTAATTGGGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFWSTCS*RNWGSH
Trigger: ATGGCTACCCCAATTACGCCAACTGCACGTGGACCA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCGTACGCAGATTCTCTaGCTGGGGTGGACCATCAAA +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMRTQIL*LGWTIK
Trigger: TTTGATGGTCCACCCCAGCCAGAGAATCTGCGTACG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTCCCACATGTGTGGCTaGGGAGAACTTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSHMCG*GELHRW
Trigger: CCACCTATGAAGTTCTCCCCAGCCACACATGTGGGA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTCCCACATGTGTGGCTaGGGAGAACTTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFSHMCG*GELHRW
Trigger: CCACCTATGAAGTTCTCCCCAGCCACACATGTGGGA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGCTCAAAGGCGGGCTaGCACTCAAACTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSSKAG*HSNLSV
Trigger: CACACTCAAGTTTGAGTGCCAGCCCGCCTTTGAGCT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCTCATTGGTTATTCTTTTaGCATGTGATTGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: AAVVTTCKVPRDGAPGLAHWLFF*HVIAFC
Trigger: ACAGAAGGCAATCACATGCCAAAAGAATAACCAATG...AGCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCATTGGTTATTCTTTTaGCATGTGATTGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGHWLFF*HVIAFC
Trigger: ACAGAAGGCAATCACATGCCAAAAGAATAACCAATG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATGGCCACTTTCCAGGTaGAAGGTGTGGAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTWPLSR*KVWKVK
Trigger: CTTCACTTTCCACACCTTCCACCTGGAAAGTGGCCA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACACTGAAAATTGAATaGCAAAGCCCTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRTLKIE*QSPACW
Trigger: CCAGCAAGCAGGGCTTTGCCATTCAATTTTCAGTGT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTGCAGGACGTTGCTGTaGACACTGAAAATTGAATGG +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRCRTLL*TLKIEW
Trigger: CCATTCAATTTTCAGTGTCCACAGCAACGTCCTGCA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTGCAGGACGTTGCTGTaGACACTGAAAATTGAATGG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLACRTLL*TLKIEW
Trigger: CCATTCAATTTTCAGTGTCCACAGCAACGTCCTGCA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAGAGGCACTCGATCTCTaGCGACCCCTGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPEALDL*RPLQGI
Trigger: TATGCCCTGCAGGGGTCGCCAGAGATCGAGTGCCTC...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGGCTGAGACATTCCATTaGGCCAAGGCCCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: VILWVSFIKALIPFMRALAETFH*AKAPGT
Trigger: TGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGC...CAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGCTGAGACATTCCATTaGGCCAAGGCCCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPAETFH*AKAPGT
Trigger: TGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGCAGTCCATGTTACTaGGGTAGTTGCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSSPCY*GSCLGS
Trigger: GCTTCCCAGGCAACTACCCCAGTAACATGGACTGCT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCTATGTAGTCGTGGTTaGGCTCGGTGGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLCSRG*ARWRSS
Trigger: TGAACTTCTCCACCGAGCCCAACCACGACTACATAG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GACAGACAAAGTTACATAGCTTGCATGTGTCAGAGCCAAGGTTTGAACCCGTCTTTCCCATCATGCGGCTaGTCTCATAGGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: DRQSYIACMCQSQGLNPSFPSCG*SHRGHS
Trigger: GGAATGGCCCCTATGAGACCAGCCGCATGATGGGAA...AGACGGGTTCAAACCTTGGCTCTGACACATGCAAGCTATGTAACTTTGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGTGGCTGCATCACGGTaGAACTTGAGCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LWVSFIKALIPFMRALLSVAASR*NLSRTW
Trigger: CCAGGTCCTGCTCAAGTTCCACCGTGATGCAGCCAC...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGAATTGCAGGAGAAGATaGCTGTTGCCCCGTAGACAG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLNCRRR*LLPRRQ
Trigger: CTGTCTACGGGGCAACAGCCATCTTCTCCTGCAATT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTGCACTCACGCACCCTaGAGCCCACCAGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPCTHAP*SPPVCI
Trigger: GATACACACTGGTGGGCTCCAGGGTGCGTGAGTGCA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTAACTCGGGCATTACTTaGAGTCCCAGGGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFNSGIT*SPRVPT
Trigger: TGTGGGAACCCTGGGACTCCAAGTAATGCCCGAGTT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTCGGATCTATGCAGCTaGGCTGGGTGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSDLCS*AGCHSM
Trigger: CATGGAGTGGCACCCAGCCCAGCTGCATAGATCCGA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTTGACCTTGGGCTCCTaGCCAGACTCCTGCCCTATC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPLTLGS*PDSCPI
Trigger: GATAGGGCAGGAGTCTGGCCAGGAGCCCAAGGTCAA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGACTTGGCATCCTGTCTaGGCCACAGACTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLTWHPV*ATDLSS
Trigger: AGAAGACAAGTCTGTGGCCCAGACAGGATGCCAAGT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCTCCATTGTGTCTGCTaGAAATGGACGCCTCTCACT +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLHCVC*KWTPLT
Trigger: AGTGAGAGGCGTCCATTTCCAGCAGACACAATGGAG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATGCCCAGCAGAGTGCTaGGTGCCCCACCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPCPAEC*VPHQQV
Trigger: CACCTGCTGGTGGGGCACCCAGCACTCTGCTGGGCA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTCCCTTCCAAGCCTCTaGAGGTGGAGAGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSLPSL*RWREMS
Trigger: TGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCATGTCTGTCCAGTTGTTaGACTGTCTACAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPCLSSC*TVYRNA
Trigger: GGCATTTCTGTAGACAGTCCAACAACTGGACAGACA...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR CAA 72 bp ACGGTGTTGAAGAGCATCCCCAAATGTCAGGAGCACTaGTTCTCAGTGCTACAGTCGACATTCCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: TVLKSIPKCQEH*FSVLQSTFLPE
Trigger: TTCTGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR CAA 72 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTaGTCTGACCTAATTGCCTCCCAAGGCCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: FIKALIPFMRAL*SDLIASQGPTS
Trigger: GGAGGTGGGGCCTTGGGAGGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGCCTTCTGTCCCAGTaGCTTCCAGAAAGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSLLSQ*LPESRN
Trigger: GTTACGACTTTCTGGAAGTCACTGGGACAGAAGGCT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCTTCATAAGAAGCCTTaGATCCCAGGGAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMLHKKP*IPGNCH
Trigger: GTGGCAGTTCCCTGGGATTCAAGGCTTCTTATGAAG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGTCCCACTGGAGCCTTaGATGAAGCCACCACAGAGA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPVPLEP*MKPPQR
Trigger: TCTCTGTGGTGGCTTCATTCAAGGCTCCAGTGGGAC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGCCATCATAAACCTTaGGGACATCTCCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLCHHKP*GHLLRR
Trigger: TCTCCGAAGGAGATGTCCTCAAGGTTTATGATGGCA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAATGCGCAGCACGTCGTaGACCTCCTCTGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKMRSTS*TSSVSN
Trigger: GTTTGACACAGAGGAGGTTCACGACGTGCTGCGCAT...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAAATTTGGTGAGAGGATaGCTCCAGATGGTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTNLVRG*LQMVLS
Trigger: TGACAGGACCATCTGGAGTCATCCTCTCACCAAATT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAATTTGGTGAGAGGATaGCTCCAGATGGTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSNLVRG*LQMVLS
Trigger: TGACAGGACCATCTGGAGTCATCCTCTCACCAAATT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTTCTGGGTAATTTGGTaGGAGGATGACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLFWVIW*EDDSRW
Trigger: CCATCTGGAGTCATCCTCTCACCAAATTACCCAGAA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCATTTCTGTATAGTCAATaGCGAAGCCAGCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPFLYSQ*RSQHCS
Trigger: TGAGCAATGCTGGCTTCGTCATTGACTATACAGAAA...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCATCGTTGAGGGCCGTGTaGAAGAAGGCGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPSLRAV*KKANWP
Trigger: TGGCCAGTTCGCCTTCTTTCACACGGCCCTCAACGA...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAAGGCACGGTTGTTCCTaGGAAACTCCCCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKRHGCS*ETPQHG
Trigger: ACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCT...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCAGCTGCAGATACGCTaGTATCTGAGTAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAQLQIR*YLSRNE
Trigger: TTCATTTCTACTCAGATATCAGCGTATCTGCAGCTG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCCAGCTGCAGATACGCTaGTATCTGAGTAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETQLQIR*YLSRNE
Trigger: TTCATTTCTACTCAGATATCAGCGTATCTGCAGCTG...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp GTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGGAAGCTCGCTTCCACTaGATCTTCCCATCATGCGGC +
Preference number: 4 (lower is better)
Translates to: VILWVSFIKALIPFMRALEARFH*IFPSCG
Trigger: GCCGCATGATGGGAAGATTCAGTGGAAGCGAGCTTC...CAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCATGCCATGTTGACACGTaGGGACAGGGTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPCHVDT*GQGGQS
Trigger: TGACTGGCCACCCTGTCCTCACGTGTCAACATGGCA...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATCGGTTGGTGCCATGTTaGCACGTGAGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNRLVPC*HVRTGW
Trigger: CCACCCTGTCCTCACGTGTCAACATGGCACCAACCG...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTGCCGTTGGAAGAAGTaGTGTTCCCGCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPCRWKK*CSRHKG
Trigger: TCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCCACAGGAAAGAGCTTaGCAGAGAGGGATGGCTTCG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPPQERA*QRGMAS
Trigger: CGAAGCCATCCCTCTCTGTCAAGCTCTTTCCTGTGG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACCCAAACGGATGCCATaGGCCGGGATCCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPPKRMP*AGIPGS
Trigger: TGACCCTGGGATCCCGGCTCATGGCATCCGTTTGGG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATTGACAGGTGCGCTCTaGCGATCCCCGGAGCACGTG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLTGAL*RSPEHV
Trigger: CACGTGCTCCGGGGATCGTCAGAGCGCACCTGTCAA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCAGTTTTGTTGTACCTaGAGTCATTGCCCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSQFCCT*SHCPAE
Trigger: TTCGGCTGGGCAATGACTTCAGGTACAACAAAACTG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACAGTTTTGTTGTACCTaGAGTCATTGCCCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTQFCCT*SHCPAE
Trigger: TTCGGCTGGGCAATGACTTCAGGTACAACAAAACTG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCGATCATGGTGGCATTaGCCTTGCTGTTGGCAACTT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFRSWWH*PCCWQL
Trigger: AAGTTGCCAACAGCAAGGTCAATGCCACCATGATCG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTCCATAGGACGTGAATaGAGGAGAGGTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSIGRE*RRGVCV
Trigger: AACACACACACCTCTCCTTCATTCACGTCCTATGGA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAAGTGTAGCCCAATGGTaGAGCCGGCCTCTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPSVAQW*SRPLLR
Trigger: TCGAAGCAGAGGCCGGCTGCACCATTGGGCTACACT...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTCCGACTCCCATTCTaGGGGATCCCAGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQLRLPF*GIPGSL
Trigger: CAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAG...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAACGAGGAAGAGGCTGTTaGTGCTGCTTTCAATGCGGC +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKRGRGC*CCFQCG
Trigger: GCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCG...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTTCACAGATGCATCGCTaGGGAAGGCGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLSQMHR*GRRGRG
Trigger: GCCTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGA...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp GTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGCAGGTTCCGGACAACTaGTCAGGCCCACCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VILWVSFIKALIPFMRALQVPDN*SGPPFC
Trigger: ACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTG...CAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTAGCCGTGGTGCTGTTTaGTGTGGCCCATCCCAGATG +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLSRGAV*CGPSQM
Trigger: CATCTGGGATGGGCCACAGCAAACAGCACCACGGCT...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGTGTGTATCCGGAATTaGAGGAGAAGATGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTVCIRN*RRRWLL
Trigger: CAACAGCCATCTTCTCCTGCAATTCCGGATACACAC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGCTTGCCTGTCCAGCTaGCATCCGCCTTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPACLSS*HPPCRC
Trigger: GCACCTGCAAGGCGGATGGCAGCTGGACAGGCAAGC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCTAGGATTAGATGGTATATTTaGAGTCTGTTGAAACATGCC +
Preference number: 4 (lower is better)
Translates to: AVVTTCKVPRDGAPGLARIRWYI*SLLKHA
Trigger: GGCATGTTTCAACAGACTGCAAATATACCATCTAAT...CCTAGCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp ACCAAGAAGGGTAAGACGGTGTTGAAGAGCATCCCCAAATGTCAGGAGCACTTGAGCACTTGTTCTCAGTaGTACAGTCGACATTCCTGC +
Preference number: 4 (lower is better)
Translates to: TKKGKTVLKSIPKCQEHLSTCSQ*YSRHSC
Trigger: GCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCT...CAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGTCTTACCCTTCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGACTGGAACACAAGCTaGATTCTGTGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFDWNTS*ILCCSS
Trigger: GGAAGAGCAGCACAGAATCCAGCTTGTGTTCCAGTC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTCCAGGGCAAAGGACTaGAACACAAGCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSRAKD*NTSWIL
Trigger: CAGAATCCAGCTTGTGTTCCAGTCCTTTGCCCTGGA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGGGTATGCCAGGGTCTaGACACATATTATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLGYARV*THIMSL
Trigger: CAAGGACATAATATGTGTCCAGACCCTGGCATACCC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCATTGGTTATTCTTTTaGCATGTGATTGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCHWLFF*HVIAFC
Trigger: ACAGAAGGCAATCACATGCCAAAAGAATAACCAATG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAGCCCCTCTTCCCTGTaGAGTGGTCAGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSPSSL*SGQSGT
Trigger: AGTTCCAGACTGACCACTCCACAGGGAAGAGGGGCT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAGCCCGGAGAGAGGATaGTGCCGCTGGGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSPERG*CRWAKS
Trigger: TGACTTCGCCCAGCGGCACCATCCTCTCTCCGGGCT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCCTGGATCCAGACAGTaGTCTGACTGCAGTGTTATA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSPGSRQ*SDCSVI
Trigger: TATAACACTGCAGTCAGACCACTGTCTGGATCCAGG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGACGCTGTCCATTTACTaGGATTCCTGGATCCAGACA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLTLSIY*DSWIQT
Trigger: TGTCTGGATCCAGGAATCCCAGTAAATGGACAGCGT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAGGGCCCGGCTCCACTaGAAGTTGGGCTCACACTCC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPRARLH*KLGSHS
Trigger: GGAGTGTGAGCCCAACTTCCAGTGGAGCCGGGCCCT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCTGGCTGGGTCTGGATaGAGTAGATGCATTCATGAT +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLLAGSG*SRCIHD
Trigger: ATCATGAATGCATCTACTCCATCCAGACCCAGCCAG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACTGGCTGGGTCTGGATaGAGTAGATGCATTCATGAT +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLAGSG*SRCIHD
Trigger: ATCATGAATGCATCTACTCCATCCAGACCCAGCCAG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCCCATCATCTCAGAATaGCTAAAAACTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAPIISE*LKTPSK
Trigger: TTTGCTGGGAGTTTTTAGCCATTCTGAGATGATGGG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACACACTGGAACACTGTaGAGTCGCCGGCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQHTGTL*SRRLPN
Trigger: GTTGGGAAGCCGGCGACTCCACAGTGTTCCAGTGTG...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATGTCACACTCCTTGCCTaGCGGGTAGGGTTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHVTLLA*RVGFWV
Trigger: TACCCAGAACCCTACCCGCCAGGCAAGGAGTGTGAC...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAGCAGATCTGTCCACTaGTGTAGTTCTGGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSRSVH*CSSGGS
Trigger: ACTACCCCCAGAACTACACCAGTGGACAGATCTGCT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGTGGAAGCCTCTGGCTaGTGCGAGGCCTTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPVEASG*CEAFGA
Trigger: AGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTCCAC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCCAAAGTGGAAGCCTCTaGCTGGTGCGAGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: FIKALIPFMRALLSDLIAQSGSL*LVRGLW
Trigger: CCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTG...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCAAAGTGGAAGCCTCTaGCTGGTGCGAGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLQSGSL*LVRGLW
Trigger: CCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTG...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATCAGAGCTGCACTGCGTaGCGCTGGTTCGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNQSCTA*RWFEEP
Trigger: CGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTG...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAGAGCTGCACTGCGTaGCGCTGGTTCGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQSCTA*RWFEEP
Trigger: CGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATGAGGCACTCGATCTCTaGCGACCCCTGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNEALDL*RPLQGI
Trigger: TATGCCCTGCAGGGGTCGCCAGAGATCGAGTGCCTC...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAAGCTGAGACATTCCATTaGGCCAAGGCCCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQAETFH*AKAPGT
Trigger: TGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGC...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATGTTGAGGTACGGCTCTaGGAAGCCAGGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHVEVRL*EARGQD
Trigger: ATCCTGTCCCCTGGCTTCCCAGAGCCGTACCTCAAC...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTGACAACTTGGATCTaGATGCCAGCGCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQLTTWI*MPAPSG
Trigger: CCCCGAAGGCGCTGGCATCCAGATCCAAGTTGTCAG...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATAACACTGTATAGTCACACCAGAGCAGATACTGTAGCAGATACTGCAGCAGATTCTTCACCCCGTTACTaGGCACAGCAGGTTCCGGAC +
Preference number: 4 (lower is better)
Translates to: ITLYSHTRADTVADTAADSSPRY*AQQVPD
Trigger: GTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAGA...ATCTGCTGCAGTATCTGCTACAGTATCTGCTCTGGTGTGACTATACAGTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTTCTTCACCCCGTTACTaGGCACAGCAGGTTCCGGAC +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLSSPRY*AQQVPD
Trigger: GTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAGA...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCGGCATGCAGGAGATGTaGGCGTGGCCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVGMQEM*AWPWRA
Trigger: TGCCCTCCAGGGCCACGCCCACATCTCCTGCATGCC...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAAAAGGGCTCTGGGTCTaGGCACTCTTGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTKGLWV*ALLKFI
Trigger: TATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTTGGTGCTGTTTGCTGTaGCCCATCCCAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTWCCLL*PIPDGD
Trigger: ATCACCATCTGGGATGGGCCACAGCAAACAGCACCA...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAACTTGAGCAGGACCTaGTTGGATGAACTCTGCACT +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSNLSRT*LDELCT
Trigger: AGTGCAGAGTTCATCCAACCAGGTCCTGCTCAAGTT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAAGTGGCTGCATCACGGTaGAACTTGAGCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQVAASR*NLSRTW
Trigger: CCAGGTCCTGCTCAAGTTCCACCGTGATGCAGCCAC...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGGCAGGTCCTGGTGGTaGAGCCCTGAAGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPGRSWW*SPEAGS
Trigger: GCTACCTGCTTCAGGGCTCCACCACCAGGACCTGCC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTTGCTGTTGGCAACTTaGAAGCCAGTCACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFLLLAT*KPVTLS
Trigger: GCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTACTTGGCATCCTGTCTaGGCCACAGACTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFTWHPV*ATDLSS
Trigger: AGAAGACAAGTCTGTGGCCCAGACAGGATGCCAAGT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTGGGGCAGACTGATCTaGGTTTGCATTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFWGRLI*VCILTP
Trigger: TGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCCTCTCACTTTCCTCTaGCCACTCTTAACATCAGTC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSPLTFL*PLLTSV
Trigger: GACTGATGTTAAGAGTGGCCAGAGGAAAGTGAGAGG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCTGGTGGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCTGCTGGATAAACTGTTTATATCCTaGCAAGGCCAGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: AGGVYSLTNLTVPSTLLDKLFIS*QGQFPT
Trigger: TGTGGGAAACTGGCCTTGCCAGGATATAAACAGTTT...ATCCAGCAGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCATTGTTGTCATACTaGATGGGGAAATTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFALLSY*MGKLGE
Trigger: CTCCCCCAATTTCCCCATTCAGTATGACAACAATGC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTATTCTTTTGGCATGTaGTTGCCTTCTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSYSFGM*LPSVPP
Trigger: TGGTGGGACAGAAGGCAATCACATGCCAAAAGAATA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CAGGAGCACTTGTTCTCAGTGCTACAGTCGACATTCCTGCCAGAAATAAGGACCTATTCTTTTGGCATGTaGTTGCCTTCTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: QEHLFSVLQSTFLPEIRTYSFGM*LPSVPP
Trigger: TGGTGGGACAGAAGGCAATCACATGCCAAAAGAATA...GGTCCTTATTTCTGGCAGGAATGTCGACTGTAGCACTGAGAACAAGTGCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGATCCAGACAGTGGTCTaGCTGCAGTGTTATAGTCTC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMIQTVV*LQCYSL
Trigger: GAGACTATAACACTGCAGTCAGACCACTGTCTGGAT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCACTGGAGCCTTGAATaGAGCCACCACAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPHWSLE*SHHREL
Trigger: AAGCTCTCTGTGGTGGCTTCATTCAAGGCTCCAGTG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAATCCAGGGTCACAGCTaGAGGACACGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPIQGHS*RTRSSL
Trigger: CAGGGAGCTCCGTGTCCTTCAGCTGTGACCCTGGAT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAGATGACGTAGTCTGGTaGGACGGTCACTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKDDVVW*DGHFPV
Trigger: GACTGGAAAGTGACCGTCTCACCAGACTACGTCATC...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACGTGGCAGTAGTAGGTaGCGGAGGAGCCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPRGSSR*RRSPAS
Trigger: TGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGAACTTAATGAGAACTTaGTTGGAGGTGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMNLMRT*LEVAKG
Trigger: GCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATCCTGATACTCCAGCTTaGATCCTGGCCGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHPDTPA*ILADSG
Trigger: CCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGG...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTTGCCGTTGGAAGAAGTaGTGTTCCCGCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLCRWKK*CSRHKG
Trigger: TCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCA...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATCATCACGGTGGAACTTaGGCAGGACCTGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHHHGGT*AGPGWM
Trigger: CATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATG...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTCCCACGCTGGTTCCTaGGCAGTGAGGGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMSHAGS*AVREGA
Trigger: GGCTCCCTCCCTCACTGCTCAGGAACCAGCGTGGGA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGGCCAGCTTCACAGCTaGAGCGCATCACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPGQLHS*SASQCL
Trigger: CAGGCACTGTGATGCGCTTCAGCTGTGAAGCTGGCC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTATTGTTTTGAAAGCTaGCCGTACCTCCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMYCFES*PYLPLF
Trigger: GAAGAGGGGGAGGTACGGTCAGCTTTCAAAACAATA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTTCCCAGGACCCAAATaGCTTTTTAATCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLFPGPK*LFNPLG
Trigger: ACCCAGTGGATTAAAAAGTCATTTGGGTCCTGGGAA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGGAAGAAGCCAAGGTTaGAGCTGTAGCGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPGRSQG*SCSGPC
Trigger: ACAAGGTCCGCTACAGCTGCAACCTTGGCTTCTTCC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCCATCCGATGTGAAGTaGAGTCGCAGCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPPSDVK*SRSQFL
Trigger: CAAGAACTGGCTGCGACTGCACTTCACATCGGATGG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTCAAAGCTGGAAAAGTaGAGTTCAAAGCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLSKLEK*SSKPLL
Trigger: CAGCAAGGGCTTTGAACTGCACTTTTCCAGCTTTGA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAGGAAGAGGCTGTTGCTaGTGCTTTCAATGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPGRGCC*CFQCGL
Trigger: CAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCC...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATAGCATTGCTCACAGATaGATCGCTGCGGAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHSIAHR*IAAEGE
Trigger: CTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATAGAGCTGGTTGGAGGTaGTGTTCAGAAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHRAGWR*CSEGQA
Trigger: TGCCTGCCCTTCTGAACAGCACCTCCAACCAGCTCT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACAGGTTCCGGACAACTaGTCAGGCCCACCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQQVPDN*SGPPFC
Trigger: ACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTG...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAAAGCCCACGGGCAGTaGTATTTTCCAGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPKAHGQ*YFPGAV
Trigger: GACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCAGCTCCCCTCACAATaGCATTGGCAAAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLQLPSQ*HWQRAL
Trigger: CAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTG...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATGTCCCCCAAACGGATaGCATGAGCCGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPCPPNG*HEPGSQ
Trigger: CTGGGATCCCGGCTCATGGCATCCGTTTGGGGGACA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCTCTGTCTTTACCTTTaGAGGCTTCTGTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLCLYL*RLLFSH
Trigger: ATGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGAAAGTGGCCCTAAATaGTATACTTTGATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEESGPK*YTLIPK
Trigger: TTTAGGAATCAAAGTATAGCATTTAGGGCCACTTTC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTTCCAATCTAGAATTTaGTTAAGAACCAGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAFQSRI*LRTRCR
Trigger: GCGACACCTGGTTCTTAAGCAAATTCTAGATTGGAA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTACCTGCCAAGGTGCCTaGGTGTCTGTCCAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLTCQGA*VSVQLL
Trigger: CAACAACTGGACAGACACGCAGGCACCTTGGCAGGT...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAGTTTGCCTGTCTACCTaGCAAGGTGCCTGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPVCLST*QGACVS
Trigger: AGACACGCAGGCACCTTGGCAGGTAGACAGGCAAAC...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTCTCAACTGTCCCATTaGGACCGTGCAGTTGGAACG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSQLSH*DRAVGT
Trigger: CGTTCCAACTGCACGGTCCCAATGGGACAGTTGAGA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGGCTGTTGTCTTTGCTaGGCATCAGCTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPGCCLC*ASASHL
Trigger: GAGGTGTGAAGCTGATGCCCAGCAAAGACAACAGCC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTTCTTAGCCGACCATTaGTTATTCTTTTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAFLADH*LFFWHV
Trigger: CACATGCCAAAAGAATAACCAATGGTCGGCTAAGAA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGTTGCCATAGTCCTCTaGGTAGTTGGGAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPVAIVL*VVGRQD
Trigger: GTCCTGTCTCCCAACTACCCAGAGGACTATGGCAAC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAGCTGCCTCAGGGGCTaGGTGAAGCTGCCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSCLRG*VKLPFS
Trigger: TGAGAACGGCAGCTTCACCCAGCCCCTGAGGCAGCT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCAAGCCACAGACTGCTaGATGTGCTGTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMQATDC*MCCSKS
Trigger: TGACTTTGAACAGCACATCCAGCAGTCTGTGGCTTG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCTTGTAGCCAAACTTaGGGGTTCCTGGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLPCSQT*GFLGPH
Trigger: GTGAGGACCCAGGAACCCCCAAGTTTGGCTACAAGG...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAACACTGAAAATTGAATaGCAAAGCCCTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTTLKIE*QSPACW
Trigger: CCAGCAAGCAGGGCTTTGCCATTCAATTTTCAGTGT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCGGGAGCGATGCATGTTaGCGGGCTGGGCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVGSDAC*RAGLPE
Trigger: TTCTGGCAGCCCAGCCCGCCAACATGCATCGCTCCC...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGCTTTCAATGCGGCCTaGGAGCTGGGAGCCATAGAA +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLAFNAA*ELGAIE
Trigger: TTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAGAAACTCCCCAGCATaGTTACAGTGTTATCTGCAC +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSRNSPA*LQCYLH
Trigger: GTGCAGATAACACTGTAACCATGCTGGGGAGTTTCT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGAGCAGTCCATGTTACTaGGGTAGTTGCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VILWVSFIKALIPFMRALSSPCY*GSCLGS
Trigger: GCTTCCCAGGCAACTACCCCAGTAACATGGACTGCT...CAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCCGTGGTTGGGCTCGGTaGAGAAGTTCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: FIKALIPFMRALLSDLIARGWAR*RSSGTG
Trigger: TCCAGTTCCTGAACTTCTCCACCGAGCCCAACCACG...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCACGTGGTTGGGCTCGGTaGAGAAGTTCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPRGWAR*RSSGTG
Trigger: TCCAGTTCCTGAACTTCTCCACCGAGCCCAACCACG...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAGGAGAGGAGGGAGCTTaGAAGCTCGCTTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPGEEGA*KLASTE
Trigger: TTCAGTGGAAGCGAGCTTCCAAGCTCCCTCCTCTCC...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATACACGGTGGTCTCGTaGGACGTGGAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPYTVVS*DVERRE
Trigger: CTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATTACACGGTGGTCTCGTaGGACGTGGAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNYTVVS*DVERRE
Trigger: CTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTA...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATTGGGAGTGGTCGCTGTaGAAATACACGGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHWEWSL*KYTVVS
Trigger: CGAGACCACCGTGTATTTCCACAGCGACCACTCCCA...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAATTGGCAAAGGGCTCTaGGTCTGGGCACTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKIGKGL*VWALLK
Trigger: CTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAAT...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATTTGAGGCGGACGCCATaGCCAATGGGCACGGTGATC +
Preference number: 4 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNLRRTP*PMGTVI
Trigger: GATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAA...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCATGTCCCATCTGACTaGCAAAACCTGCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPHVPSD*QNLRGE
Trigger: CTCTCCACGCAGGTTTTGCCAGTCAGATGGGACATG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAGGGTCCGCACACGTaGTCAGGGTCGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQGPHT*SGSDLC
Trigger: GCATAGATCCGACCCTGACCACGTGTGCGGACCCTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTCCACAGGGAATTCTTaGCAAAAACATCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLSTGNS*QKHPQE
Trigger: TTCCTGGGGATGTTTTTGCCAAGAATTCCCTGTGGA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTATGATGTCTGTGGGCTaGATGTTGCGGTCGTACATT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFMMSVG*MLRSYI
Trigger: AATGTACGACCGCAACATCCAGCCCACAGACATCAT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCTCTCACTTTCCTCTaGCCACTCTTAACATCAGTC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPLTFL*PLLTSV
Trigger: GACTGATGTTAAGAGTGGCCAGAGGAAAGTGAGAGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAGGGCAGATGTGTGCGTaGAGGGGTGTCACAATGTAC +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPGQMCA*RGVTMY
Trigger: GTACATTGTGACACCCCTCCACGCACACATCTGCCC...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAAATGGAGTGGAGCTTaGTCTGAGTGGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPKWSGA*SEWQGS
Trigger: GCTGCCTTGCCACTCAGACCAAGCTCCACTCCATTT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR CCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGGAGCTTATAGAAAATaGAGTGGAGCTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSGAYRK*SGAWSE
Trigger: CTCAGACCAAGCTCCACTCCATTTTCTATAAGCTCC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR TCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATTACCCTGAGTGCCTGTaGCTGAATTCCCACACTCAG +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHYPECL*LNSHTQ
Trigger: CTGAGTGTGGGAATTCAGTCACAGGCACTCAGGGTA...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTTCTGTATAGTCAATaGCGAAGCCAGCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSFLYSQ*RSQHCS
Trigger: TGAGCAATGCTGGCTTCGTCATTGACTATACAGAAA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GACAGACAAAGTTACATAGCTTGCATGTGTCAGAGCCAAGGTTTGAACCCGTCTAACTTAATGAGAACTTaGTTGGAGGTGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: DRQSYIACMCQSQGLNPSNLMRT*LEVAKG
Trigger: GCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTT...AGACGGGTTCAAACCTTGGCTCTGACACATGCAAGCTATGTAACTTTGTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp TGGCAGTCACAGCTGCTTAGGTTCTTTACATCCTTGTTTCTCTCTGTTGCTTCCGCTCTGTCACAAAACTaGCAACTTGGATCTGGATGC +
Preference number: 4 (lower is better)
Translates to: WQSQLLRFFTSLFLSVASALSQN*QLGSGC
Trigger: GCATCCAGATCCAAGTTGTCAGTTTTGTGACAGAGC...GGAAGCAACAGAGAGAAACAAGGATGTAAAGAACCTAAGCAGCTGTGACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGGAAGTACTCCACTGTaGGGGAGATGTTATAGTCGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPGSTPL*GRCYSR
Trigger: CCGACTATAACATCTCCCTCACAGTGGAGTACTTCC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCTGAATAGCGGATCTTaGAGCCCTTCCGATTGTAGG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPLNSGS*SPSDCR
Trigger: CCTACAATCGGAAGGGCTTCAAGATCCGCTATTCAG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAAACCAGGCCATCACTaGACACAACTCGGGCATTAC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPKPGHH*TQLGHY
Trigger: GTAATGCCCGAGTTGTGTTCAGTGATGGCCTGGTTT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCACAGATACTCTATGTaGCTCCATCATATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFHRYSM*LHHIAR
Trigger: CCTGGCTATATGATGGAGTCACATAGAGTATCTGTG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAACACAGGGAAACACTaGGGCAGCTCTCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPNTGKH*GSSPVQ
Trigger: CTGGACCGGAGAGCTGCCTCAGTGTTTCCCTGTGTT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTTCAATATGTGACATaGATCTCTGAGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSFQYVT*ISEASM
Trigger: CATGCTGGCCTCAGAGATTCATGTCACATATTGAAA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATCCAAGAGAGAACATCTaGTTGCCCCTGCTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHPRENI*LPLLQS
Trigger: TGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGG...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp GACAGACAAAGTTACATAGCTTGCATGTGTCAGAGCCAAGGTTTGAACCCGTCTGGCAAGCACTCTCAATaGAAGACCTTGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: DRQSYIACMCQSQGLNPSGKHSQ*KTLLRR
Trigger: TCTTCTCAGCAAGGTCTTTCATTGAGAGTGCTTGCC...AGACGGGTTCAAACCTTGGCTCTGACACATGCAAGCTATGTAACTTTGTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATTGAACCCTGCTGGATaGCATTGGGCAGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLNPAG*HWAASL
Trigger: CAGGGAGGCTGCCCAATGGCATCCAGCAGGGTTCAA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTCAAAGCTGGAAAAGTaGAGTTCAAAGCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFSKLEK*SSKPLL
Trigger: CAGCAAGGGCTTTGAACTGCACTTTTCCAGCTTTGA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAGTGTAGCCCAATGGTaGAGCCGGCCTCTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSVAQW*SRPLLR
Trigger: TCGAAGCAGAGGCCGGCTGCACCATTGGGCTACACT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATCACAGATGCATCGCTaGGGAAGGCGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSQMHR*GRRGRG
Trigger: GCCTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCACTGCCCAGCCTCTTaGCATAGCGGGGTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMHCPAS*HSGVPA
Trigger: TGCCGGAACCCCGCTATGGCAAGAGGCTGGGCAGTG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATAGAGCTGGTTGGAGGTaGTGTTCAGAAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNRAGWR*CSEGQA
Trigger: TGCCTGCCCTTCTGAACAGCACCTCCAACCAGCTCT...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ATAACACTGTATAGTCACACCAGAGCAGATACTGTAGCAGATACTGCAGCAGATTGTTCCCCCACACTGTaGAATACAGAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ITLYSHTRADTVADTAADCSPTL*NTEWRR
Trigger: CCTCCTCCACTCTGTATTGCACAGTGTGGGGGAACA...ATCTGCTGCAGTATCTGCTACAGTATCTGCTCTGGTGTGACTATACAGTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCATGTTCCCCCACACTGTaGAATACAGAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPCSPTL*NTEWRR
Trigger: CCTCCTCCACTCTGTATTGCACAGTGTGGGGGAACA...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACATTGGCTTGACAGGTaGGCTCTGACGATCCCCGGA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPHWLDR*ALTIPG
Trigger: TCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGACTCCACACTCAGGCTaGGAGCCGCTCCACGAGCCA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMTPHSG*EPLHEP
Trigger: TGGCTCGTGGAGCGGCTCGCAGCCTGAGTGTGGAGT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAACATCTGATTGCCCCTaGTGCAGTCAGCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPTSDCP*CSQLRC
Trigger: ACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGT...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACCAGCTCAGCCAGGATaGTCCATGTGCAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPPAQPG*SMCSRH
Trigger: ATGCCGACTGCACATGGACCATCCTGGCTGAGCTGG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAGGGGCCTCGAAGGTaGGCATCACACATGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMEGPRR*ASHMRA
Trigger: AGCCCGCATGTGTGATGCCCACCTTCGAGGCCCCTC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCAGTGCTACAGTCGACATTCCTGCCAGAAATAAGGACCCCACCAGCAACGTTCTTCTTAGCCGACCATTaGTTATTCTTTTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: SVLQSTFLPEIRTPPATFFLADH*LFFWHV
Trigger: CACATGCCAAAAGAATAACCAATGGTCGGCTAAGAA...GAACGTTGCTGGTGGGGTCCTTATTTCTGGCAGGAATGTCGACTGTAGCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCCGGATGCTGTAGGCTaGGACCTCGGGCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMPDAVG*DLGLLT
Trigger: TGTGAGGAGCCCGAGGTCCCAGCCTACAGCATCCGG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTGCTATGCAGGTCCTTaGGCAGGGCCGGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMCYAGP*AGPGHS
Trigger: TGAGTGGCCCGGCCCTGCCCAAGGACCTGCATAGCA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACACACTGGAACACTGTaGAGTCGCCGGCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPHTGTL*SRRLPN
Trigger: GTTGGGAAGCCGGCGACTCCACAGTGTTCCAGTGTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAAGAAGGTAGAGCTGGTTaGAGGTGCTGTTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQEGRAG*RCCSEG
Trigger: CCCTTCTGAACAGCACCTCCAACCAGCTCTACCTTC...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATAGCAGTCCATGTTACTaGGGTAGTTGCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHSSPCY*GSCLGS
Trigger: GCTTCCCAGGCAACTACCCCAGTAACATGGACTGCT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAATGTGGAAATACACGGTaGTCTCGTGGGACGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQCGNTR*SRGTWR
Trigger: TCTCCACGTCCCACGAGACCACCGTGTATTTCCACA...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATAACACTGTATAGTCACACCAGAGCAGATACTGTAGCAGATACTGCAGCAGATAATCCTGGCCGATTCTaGGAGTGGTCGCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ITLYSHTRADTVADTAADNPGRF*EWSLWK
Trigger: TTTCCACAGCGACCACTCCCAGAATCGGCCAGGATT...ATCTGCTGCAGTATCTGCTACAGTATCTGCTCTGGTGTGACTATACAGTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAAAATCCTGGCCGATTCTaGGAGTGGTCGCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQNPGRF*EWSLWK
Trigger: TTTCCACAGCGACCACTCCCAGAATCGGCCAGGATT...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAAAGTGGCGGCCAATaGACTCGGGGTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQSGGQ*TRGLTP
Trigger: TGGAGTCAGACCCCGAGTCCATTGGCCGCCACTTTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCATCTCTTCTCTGTGTaGGGAACAGGGCATGAAGCA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPHLFSV*GTGHEA
Trigger: TGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCGGTTGTTGTATTCCTTaGGAACCTTTGGATGTAAAT +
Preference number: 4 (lower is better)
Translates to: AARLHKGRGRGTEGPSETGCCIP*EPLDVN
Trigger: ATTTACATCCAAAGGTTCCCAAGGAATACAACAACC...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCGATAGCTCCTGGGAATaGCAGTCACAGCTGCTTAGG +
Preference number: 4 (lower is better)
Translates to: FIKALIPFMRALLSDLIADSSWE*QSQLLR
Trigger: CCTAAGCAGCTGTGACTGCCATTCCCAGGAGCTATC...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATGAAATAAGGATGGCCTaGGGCTGTGCTGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNEIRMA*GCAEPP
Trigger: AGGAGGCTCAGCACAGCCCCAGGCCATCCTTATTTC...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 72 bp TTGCTCTTAAGGATCACCAAGAAGGGTAAGACGGTGTaGAAGAGCATCCCCAAATGTCAGGAGCACTTGTTC +
Preference number: 4 (lower is better)
Translates to: LLLRITKKGKTV*KSIPKCQEHLF
Trigger: GAACAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGTCTTACCCTTCTTGGTGATCCTTAAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
3UTR CAA 72 bp AGGCTGGGTTCTGTTTCCAGTTCTATCCACATGGTTTaGGGCAAGTACTTGAGCCTTCCTTTGCCCTATTTC +
Preference number: 4 (lower is better)
Translates to: RLGSVSSSIHMV*GKYLSLPLPYF
Trigger: GAAATAGGGCAAAGGAAGGCTCAAGTACTTGCCCAAAACCATGTGGATAGAACTGGAAACAGAACCCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTTCTGGTCCCCATCCTaGCCACCATCACCGACCGTC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMFWSPS*PPSPTV
Trigger: GACGGTCGGTGATGGTGGTCAGGATGGGGACCAGAA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGCCCTGGCTTTCAGCTaGATTCCCTTCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMALAFS*IPFPGW
Trigger: CCAGCCAGGGAAGGGAATTCAGCTGAAAGCCAGGGC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTGGTCCAGATGCAGTTaGGATTGTGTTCATAGGGAG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPWSRCS*DCVHRE
Trigger: CTCCCTATGAACACAATCTCAACTGCATCTGGACCA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCGCAGGACGACCGAGTTaGAGGTGCTATGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVAGRPS*RCYAGP
Trigger: AGGACCTGCATAGCACCTTCAACTCGGTCGTCCTGC...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCCACACACGTGGGCGCTaGGACATTCCATTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVHTRGR*DIPLGQ
Trigger: TTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTG...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGCTCTGTCACAAAACTaGCAACTTGGATCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPALSQN*QLGSGC
Trigger: GCATCCAGATCCAAGTTGTCAGTTTTGTGACAGAGC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACCTGATACTCCAGCTTaGATCCTGGCCGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPPDTPA*ILADSG
Trigger: CCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACATTTGCCATTGGCCTaGCAGCGGATGACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPHLPLA*QRMTLW
Trigger: CCAAAGGGTCATCCGCTGTCAGGCCAATGGCAAATG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAACTCCATGTCCCATCTaGCTGGCAAAACCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPTPCPI*LAKPAW
Trigger: CCACGCAGGTTTTGCCAGTCAGATGGGACATGGAGT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTTTCAATATGTGACATaGATCTCTGAGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFFQYVT*ISEASM
Trigger: CATGCTGGCCTCAGAGATTCATGTCACATATTGAAA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTTTTTGGGCAAGTACTTaGGCCTTCCTTTGCCCTATT +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTFWAST*AFLCPI
Trigger: AATAGGGCAAAGGAAGGCTCAAGTACTTGCCCAAAA...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp GACAGACAAAGTTACATAGCTTGCATGTGTCAGAGCCAAGGTTTGAACCCGTCTAAGGCTTCAGTGTGGTaGTTCTGTGGGTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: DRQSYIACMCQSQGLNPSKASVW*FCGSLL
Trigger: TAAAAGAGACCCACAGAATCACCACACTGAAGCCTT...AGACGGGTTCAAACCTTGGCTCTGACACATGCAAGCTATGTAACTTTGTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAGCTGGATTCTGTGCTaGTCTTCCGCGGTGATGGTC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSWILC*SSAVMV
Trigger: GACCATCACCGCGGAAGAGCAGCACAGAATCCAGCT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAGGTTCCGGACAACTaGTCAGGCCCACCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQVPDN*SGPPFC
Trigger: ACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp GGGGTTAGAATATTTGCCTTACTACCTCACAGAATTCTTACAGGTCACAAACTCAAAGCCCACGGGCAGTaGTATTTTCCAGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: GVRIFALLPHRILTGHKLKAHGQ*YFPGAV
Trigger: GACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTT...GAGTTTGTGACCTGTAAGAATTCTGTGAGGTAGTAAGGCAAATATTCTAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAGCTCCCCTCACAATaGCATTGGCAAAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQLPSQ*HWQRAL
Trigger: CAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGTGTGTATCCGGAATTaGAGGAGAAGATGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPVCIRN*RRRWLL
Trigger: CAACAGCCATCTTCTCCTGCAATTCCGGATACACAC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGGCGGAAGCCAGCATTaGATTGGTACACCACACTGC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPGGSQH*IGTPHC
Trigger: GCAGTGTGGTGTACCAATGCAATGCTGGCTTCCGCC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTATGAAGCATCCTTCATaGGCACTTCTAGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSMKHPS*ALLVLK
Trigger: CTTCAAAACTAGAAGTGCGCATGAAGGATGCTTCAT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCTACCTATGGTGCTaGCTGCTTTGTTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLPYLWC*LLCFCL
Trigger: GAGACAGAAACAAAGCAGGCAGCACCATAGGTAGGG...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTTCTTAGCCGACCATTaGTTATTCTTTTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLFLADH*LFFWHV
Trigger: CACATGCCAAAAGAATAACCAATGGTCGGCTAAGAA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAGAGTTCGAATGCCCTaGCTTTCAGCTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPRVRMP*LSAEFP
Trigger: AGGGAATTCAGCTGAAAGCCAGGGCATTCGAACTCT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCTGCATGTTGGCGGGCTaGGCTGCCAGAAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVCMLAG*AARRTC
Trigger: ACAGGTTCTTCTGGCAGCCCAGCCCGCCAACATGCA...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGCTTTCAATGCGGCCTaGGAGCTGGGAGCCATAGAA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPAFNAA*ELGAIE
Trigger: TTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTAGCAGATCTGTCCACTaGTGTAGTTCTGGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLSRSVH*CSSGGS
Trigger: ACTACCCCCAGAACTACACCAGTGGACAGATCTGCT...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTATCCCGGCTCACACTaGAAAGACACCACATCATTC +
Preference number: 4 (lower is better)
Translates to: VILWVSFIKALIPFMRALYPGSH*KDTTSF
Trigger: GAATGATGTGGTGTCTTTCCAGTGTGAGCCGGGATA...CAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAATATCCCGGCTCACACTaGAAAGACACCACATCATTC +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKYPGSH*KDTTSF
Trigger: GAATGATGTGGTGTCTTTCCAGTGTGAGCCGGGATA...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCCTGTGCAATACAGAGTaGAGGAGGGTAGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: FIKALIPFMRALLSDLIALCNTE*RRVVPS
Trigger: CGATGGAACTACCCTCCTCCACTCTGTATTGCACAG...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCACTGTGCAATACAGAGTaGAGGAGGGTAGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPLCNTE*RRVVPS
Trigger: CGATGGAACTACCCTCCTCCACTCTGTATTGCACAG...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACGTGGTTGGGCTCGGTaGAGAAGTTCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPRGWAR*RSSGTG
Trigger: TCCAGTTCCTGAACTTCTCCACCGAGCCCAACCACG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATGGAGAGGAGGGAGCTTaGAAGCTCGCTTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNGEEGA*KLASTE
Trigger: TTCAGTGGAAGCGAGCTTCCAAGCTCCCTCCTCTCC...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTAAAGGGCTCTGGGTCTaGGCACTCTTGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: LWVSFIKALIPFMRALLSKGLWV*ALLKFI
Trigger: TATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTT...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCAGCCAGACACAGTCCTaGGAGCTGGAGTACGGGCTA +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVSQTQS*ELEYGL
Trigger: TAGCCCGTACTCCAGCTCCCAGGACTGTGTCTGGCT...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTAACTTGAGCAGGACCTaGTTGGATGAACTCTGCACT +
Preference number: 4 (lower is better)
Translates to: LWVSFIKALIPFMRALLSNLSRT*LDELCT
Trigger: AGTGCAGAGTTCATCCAACCAGGTCCTGCTCAAGTT...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCCAGCCGAAGGCCATTaGCTGGAATCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMPAEGH*LESQGH
Trigger: GTGACCCTGGGATTCCAGCCAATGGCCTTCGGCTGG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGGGGATGAGCGGAGGTaGCTTGCACATGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPGDERR*LAHESF
Trigger: AAAGCTCTCATGTGCAAGCCACCTCCGCTCATCCCC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACTGTATCCCAAACTGTaGCACACCAGGGTCCGCACA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLYPKL*HTRVRT
Trigger: TGTGCGGACCCTGGTGTGCCACAGTTTGGGATACAG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTTGGGAGGCAGGTCCTaGTGGTGGAGCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMLGGRS*WWSPEA
Trigger: TGCTTCAGGGCTCCACCACCAGGACCTGCCTCCCAA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCAACCGTGGGAGGCCTaGGGAGTTGAATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMQPWEA*GVESLP
Trigger: GGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCAGGAACAAGAGACCTaGCCTACCACCAAGGTAACT +
Preference number: 4 (lower is better)
Translates to: RLQCGDSVGLFYKGTNPIQEQET*PTTKVT
Trigger: AGTTACCTTGGTGGTAGGCCAGGTCTCTTGTTCCTG...AATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCTTGGGTGGTGGCTTTaGACTTGCCATCTAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMLGWWL*TCHLGP
Trigger: CGGCCCTAGATGGCAAGTTCAAAGCCACCACCCAAG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGTTGAATCCTTCATATaGCATGGAGAAATCAGAGAT +
Preference number: 4 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTVESFI*HGEIRD
Trigger: ATCTCTGATTTCTCCATGTCATATGAAGGATTCAAC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTTGCCATCATAAACCTTaGGGACATCTCCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLCHHKP*GHLLRR
Trigger: TCTCCGAAGGAGATGTCCTCAAGGTTTATGATGGCA...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCATGGTCCAGATGCAGTTaGGATTGTGTTCATAGGGAG +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPWSRCS*DCVHRE
Trigger: CTCCCTATGAACACAATCTCAACTGCATCTGGACCA...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTCGTTGAGGGCCGTGTaGAAGAAGGCGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMSLRAV*KKANWP
Trigger: TGGCCAGTTCGCCTTCTTTCACACGGCCCTCAACGA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTAACTTAATGAGAACTTaGTTGGAGGTGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLNLMRT*LEVAKG
Trigger: GCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTT...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAGCTCTGTCACAAAACTaGCAACTTGGATCTGGATGC +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPALSQN*QLGSGC
Trigger: GCATCCAGATCCAAGTTGTCAGTTTTGTGACAGAGC...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCGAAGCTCGCTTCCACTaGATCTTCCCATCATGCGGC +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVEARFH*IFPSCG
Trigger: GCCGCATGATGGGAAGATTCAGTGGAAGCGAGCTTC...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCGCACTCGAAGGTCACTaGTTGTCCCACGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVALEGH*LSHVVA
Trigger: GGCTACAACGTGGGACAATCAGTGACCTTCGAGTGC...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCAGGACCTGGTTGGATaGACTCTGCACTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLQDLVG*TLHCFL
Trigger: AAGAAAACAGTGCAGAGTTCATCCAACCAGGTCCTG...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCATCTAAAGCCCAGTaGTCATCTTTGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPSKAQ*SSLNLF
Trigger: GAATAAGTTCAAAGATGATCACTGGGCTTTAGATGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCAGAGCCTTGGTAGATaGAGGTGGCTCCGGAGGACT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMQSLGR*RWLRRT
Trigger: AGTCCTCCGGAGCCACCTTCATCTACCAAGGCTCTG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGCCACTCTGTTGTTTTaGTTCAGGACCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPATLLF*FRTCQV
Trigger: GACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GGGGTTAGAATATTTGCCTTACTACCTCACAGAATTCTTACAGGTCACAAACTCCTTAGCTCTTTCCACTaGGAAGGCTTCAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GVRIFALLPHRILTGHKLLSSFH*EGFSVV
Trigger: CACCACACTGAAGCCTTCTCAGTGGAAAGAGCTAAG...GAGTTTGTGACCTGTAAGAATTCTGTGAGGTAGTAAGGCAAATATTCTAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAACAAGCTGGATTCTGTaGTGCTCTTCCGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPTSWIL*CSSAVM
Trigger: CATCACCGCGGAAGAGCAGCACAGAATCCAGCTTGT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATTGAAGGTTGAACCCTaGTGGATGCCATTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLKVEP*WMPLGS
Trigger: GCTGCCCAATGGCATCCAGCAGGGTTCAACCTTCAA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGGCCATATGCAGGTATaGCAGGGTCACCGCAACTGC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMGHMQV*QGHRNC
Trigger: GCAGTTGCGGTGACCCTGGCATACCTGCATATGGCC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCGAGATCCAGTTAGCTaGCTCAGGGGCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRDPVS*LRGWVK
Trigger: CTTCACCCAGCCCCTGAGGCAGCTAACTGGATCTCG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTTTCGGAGAGTTCGAATaGCCTGGCTTTCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLFGEFE*PGFQLN
Trigger: ATTCAGCTGAAAGCCAGGGCATTCGAACTCTCCGAA...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGCAGTTCAAAGCCCTTaGTGGTGTTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLAVQSP*WCFQHQ
Trigger: CTGATGCTGAAAACACCAGCAAGGGCTTTGAACTGC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCGGATCCCAGGGTCATTaGAGGACGTTGCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVGSQGH*RTLLWT
Trigger: TGTCCACAGCAACGTCCTGCAATGACCCTGGGATCC...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCCACCGAGAAGTCACTaGCCAGCCTCTTGCCATAGC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMPPRSH*PASCHS
Trigger: GCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGTTACAGTGTTATCTaGACCATCAAATACTTCCAG +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFGYSVI*TIKYFQ
Trigger: CTGGAAGTATTTGATGGTGCAGATAACACTGTAACC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGTTACAGTGTTATCTaGACCATCAAATACTTCCAG +
Preference number: 4 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGYSVI*TIKYFQ
Trigger: CTGGAAGTATTTGATGGTGCAGATAACACTGTAACC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTCAAACTCATCATATTaGTTCTCGCTGAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFSNSSY*FSLRKY
Trigger: GTACTTCCTCAGCGAGAAGCAATATGATGAGTTTGA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGCTGTACCGCACCACTaGTCCCACAGTATAACTGTC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPAVPHH*SHSITV
Trigger: GACAGTTATACTGTGGGAGCAGTGGTGCGGTACAGC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAGTACGCTTGCCGATaGAGCTGTACCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMEYACR*SCTAPL
Trigger: CAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCCACCAGAGTACGCTTaGCGATGCAGCTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMPPEYA*RCSCTA
Trigger: TGCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCATTGGCTTGACAGGTaGGCTCTGACGATCCCCGGA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMHWLDR*ALTIPG
Trigger: TCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ACCAAGAAGGGTAAGACGGTGTTGAAGAGCATCCCCAAATGTCAGGAGCACTTGCAGTCTGTTGAAACATaGCTCAAGTATTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: TKKGKTVLKSIPKCQEHLQSVET*LKYFFH
Trigger: GTGAAAGAAATACTTGAGGCATGTTTCAACAGACTG...CAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGTCTTACCCTTCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR GCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATCTTCCCTACCTATGGTaGTGCCTGCTTTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHLPYLW*CLLCFC
Trigger: ACAGAAACAAAGCAGGCAGCACCATAGGTAGGGAAG...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATTGGGGAAGGGACCTGTaGAAGGTTTTACACAGCTGG +
Preference number: 4 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNWGRDL*KVLHSW
Trigger: CCAGCTGTGTAAAACCTTGCACAGGTCCCTTCCCCA...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTCCTCTGTGTTTCCTGTaGTTCTTAGCTCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: LWVSFIKALIPFMRALLSPLCFL*FLALST
Trigger: AGTGGAAAGAGCTAAGAAGCACAGGAAACACAGAGG...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGCCATATGGGAACCCTaGGCTCTCAACTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPAIWEP*ALNCPI
Trigger: AATGGGACAGTTGAGAGCCCAGGGTTCCCATATGGC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTGGCTGGGTCTGGATaGAGTAGATGCATTCATGAT +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQLAGSG*SRCIHD
Trigger: ATCATGAATGCATCTACTCCATCCAGACCCAGCCAG...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCAGTTCTGGGGGTAGTTaGGGGACAAGACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVSSGGS*GTRPLR
Trigger: ACGGAGTGGTCTTGTCCCCCAACTACCCCCAGAACT...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGATTCGAAGCGGACGATaGCCCCCACCGAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMIRSGR*PPPRSH
Trigger: GTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAAT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGCTGAGACATTCCATTaGGCCAAGGCCCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMAETFH*AKAPGT
Trigger: TGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGTTGAGGTACGGCTCTaGGAAGCCAGGGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMVEVRL*EARGQD
Trigger: ATCCTGTCCCCTGGCTTCCCAGAGCCGTACCTCAAC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAACAAAACTGACAACTTaGATCTGGATGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPTKLTT*IWMPAP
Trigger: AGGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGT...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTAGAAACTCCCCAGCATaGTTACAGTGTTATCTGCAC +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPRNSPA*LQCYLH
Trigger: GTGCAGATAACACTGTAACCATGCTGGGGAGTTTCT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCTTCCCATCATGCGGCTaGTCTCATAGGGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVFPSCG*SHRGHS
Trigger: GGAATGGCCCCTATGAGACCAGCCGCATGATGGGAA...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATTGTGGAAATACACGGTaGTCTCGTGGGACGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNCGNTR*SRGTWR
Trigger: TCTCCACGTCCCACGAGACCACCGTGTATTTCCACA...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTAAAGGGCTCTGGGTCTaGGCACTCTTGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLKGLWV*ALLKFI
Trigger: TATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTT...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAGCCAGACACAGTCCTaGGAGCTGGAGTACGGGCTA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMSQTQS*ELEYGL
Trigger: TAGCCCGTACTCCAGCTCCCAGGACTGTGTCTGGCT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATCCATGTCCGGTCCTTaGTGCAGCTCAGCACAGATA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSMSGP*CSSAQI
Trigger: TATCTGTGCTGAGCTGCACCAAGGACCGGACATGGA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACTTTGCAGACGGGCTTaGTTCCATTCCATGTCCGGT +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLCRRA*FHSMSG
Trigger: ACCGGACATGGAATGGAACCAAGCCCGTCTGCAAAG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTCTATGCAGCTGGGCTaGGTGCCACTCCATGTCCCA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMSMQLG*VPLHVP
Trigger: TGGGACATGGAGTGGCACCCAGCCCAGCTGCATAGA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGTTGCGGTCGTACATTaGGTTCTCAAATGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPVAVVH*VLKCGP
Trigger: CGGGCCACATTTGAGAACCCAATGTACGACCGCAAC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATAAGGTTTTACACAGCTaGCCCAAGGTGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNKVLHS*PKVELG
Trigger: TCCCAGCTCCACCTTGGGCCAGCTGTGTAAAACCTT...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 72 bp CAAAGTTACATAGCTTGCATGTGTCAGAGCCAAGGTTaGAACCCGTCTGTGACTCTGAAGTCCATACTCTTA +
Preference number: 4 (lower is better)
Translates to: QSYIACMCQSQG*NPSVTLKSILL
Trigger: TAAGAGTATGGACTTCAGAGTCACAGACGGGTTCAAACCTTGGCTCTGACACATGCAAGCTATGTAACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACTTCATAAGAAGCCTTaGATCCCAGGGAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLHKKP*IPGNCH
Trigger: GTGGCAGTTCCCTGGGATTCAAGGCTTCTTATGAAG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTTGAATCCTTCATATaGCATGGAGAAATCAGAGAT +
Preference number: 4 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFVESFI*HGEIRD
Trigger: ATCTCTGATTTCTCCATGTCATATGAAGGATTCAAC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGATGCGCAGCACGTCGTaGACCTCCTCTGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMMRSTS*TSSVSN
Trigger: GTTTGACACAGAGGAGGTTCACGACGTGCTGCGCAT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTTTCTGTATAGTCAATaGCGAAGCCAGCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPFLYSQ*RSQHCS
Trigger: TGAGCAATGCTGGCTTCGTCATTGACTATACAGAAA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TATTTCTTCATTTGTAAAGTGGGGGTTAGAATATTTGCCTTACTACCTCACAGAGCACTCGAAGGTCACTaGTTGTCCCACGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: YFFICKVGVRIFALLPHRALEGH*LSHVVA
Trigger: GGCTACAACGTGGGACAATCAGTGACCTTCGAGTGC...TCTGTGAGGTAGTAAGGCAAATATTCTAACCCCCACTTTACAAATGAAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGGAGAAGGAGACAGATaGCCTGTAGGAGAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMGEGDR*PVGEAS
Trigger: CGAGGCTTCTCCTACAGGTCATCTGTCTCCTTCTCC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCAGTCACAAGTCAAAATaGCAGAGCCTTAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FIKALIPFMRALLSDLIASHKSK*QSLKAW
Trigger: CCAGGCTTTAAGGCTCTGTCATTTTGACTTGTGACT...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAGAGAGGGTGGTGGCTaGACTAACAATGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMREGGG*TNNGGW
Trigger: CCAGCCACCATTGTTAGTGCAGCCACCACCCTCTCT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCCGAGCCTAGTCTTTTaGCCCTTTCGGGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMPSLVF*PFRVCQ
Trigger: CTGGCATACCCGAAAGGGGCAAAAGACTAGGCTCGG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATAATCAAGCCACAGACTaGTGGATGTGCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHNQATD*WMCCSK
Trigger: CTTTGAACAGCACATCCAGCAGTCTGTGGCTTGATT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAGAGGCTGTTGCTGCTaGTTTCAATGCGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRGCCC*FQCGLG
Trigger: TCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCGAGGAAGAGGCTGTTaGTGCTGCTTTCAATGCGGC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRGRGC*CCFQCG
Trigger: GCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGGTGGTAGCCTTCACTaGAGCTGTACATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMGGSLH*SCTWPW
Trigger: CCAAGGCCATGTACAGCTGCAGTGAAGGCTACCACC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCACAGATCCACAAGTTaGTTTGCTATTTTAAATCCA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSHRSTS*FAILNP
Trigger: TGGATTTAAAATAGCAAAGCAACTTGTGGATCTGTG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGAAAGTGGCCCTAAATaGTATACTTTGATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSESGPK*YTLIPK
Trigger: TTTAGGAATCAAAGTATAGCATTTAGGGCCACTTTC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATCCAGGGCAAAGGACTaGAACACAAGCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSRAKD*NTSWIL
Trigger: CAGAATCCAGCTTGTGTTCCAGTCCTTTGCCCTGGA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCGCAGATTCTCTGGCTaGGGTGGACCATCAAACACC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRRFSG*GGPSNT
Trigger: GGTGTTTGATGGTCCACCCCAGCCAGAGAATCTGCG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATTCTTGACTTGGTATTaGGCACTGAATCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPFLTWY*ALNPRC
Trigger: GCAGCGCGGATTCAGTGCCCAATACCAAGTCAAGAA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAACACTGAAAATTGAATaGCAAAGCCCTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPTLKIE*QSPACW
Trigger: CCAGCAAGCAGGGCTTTGCCATTCAATTTTCAGTGT...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATAACACTGTATAGTCACACCAGAGCAGATACTGTAGCAGATACTGCAGCAGATAGAAACTCCCCAGCATaGTTACAGTGTTATCTGCAC +
Preference number: 4 (lower is better)
Translates to: ITLYSHTRADTVADTAADRNSPA*LQCYLH
Trigger: GTGCAGATAACACTGTAACCATGCTGGGGAGTTTCT...ATCTGCTGCAGTATCTGCTACAGTATCTGCTCTGGTGTGACTATACAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAAGAAACTCCCCAGCATaGTTACAGTGTTATCTGCAC +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPRNSPA*LQCYLH
Trigger: GTGCAGATAACACTGTAACCATGCTGGGGAGTTTCT...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACTGTGCAATACAGAGTaGAGGAGGGTAGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLCNTE*RRVVPS
Trigger: CGATGGAACTACCCTCCTCCACTCTGTATTGCACAG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACGGGAGGAGTTGAGTTaGTTCTTTCCAACTCCGAGA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPREELS*FFPTPR
Trigger: TCTCGGAGTTGGAAAGAACCAACTCAACTCCTCCCG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAATTGCAGGAGAAGATaGCTGTTGCCCCGTAGACAG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPNCRRR*LLPRRQ
Trigger: CTGTCTACGGGGCAACAGCCATCTTCTCCTGCAATT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
3UTR CAA 72 bp ATCCACATGGTTTTGGGCAAGTACTTGAGCCTTCCTTaGCCCTATTTCTTCATTTGTAAAGTGGGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: IHMVLGKYLSLP*PYFFICKVGVR
Trigger: TCTAACCCCCACTTTACAAATGAAGAAATAGGGCAAAGGAAGGCTCAAGTACTTGCCCAAAACCATGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGCTGGCACTCAAACTTaGGTGTGTCACCGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMAGTQT*VCHRGE
Trigger: TTCACCACGGTGACACACTCAAGTTTGAGTGCCAGC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAACTTAATGAGAACTTaGTTGGAGGTGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPNLMRT*LEVAKG
Trigger: GCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAAGATACGCTGATATCTaGGTAGAAATGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKRYADI*VEMKVE
Trigger: CTCTACCTTCATTTCTACTCAGATATCAGCGTATCT...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAGTTGCTTGAGCTGGTaGCAATCAGGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMSCLSW*QSGELS
Trigger: ACTCAGCTCCCCTGATTGTCACCAGCTCAAGCAACT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGCCACTCTGTTGTTTTaGTTCAGGACCTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMATLLF*FRTCQV
Trigger: GACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATGAAAGACCTTGCTaGGAAGAACTTGGAAATAAG +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTNERPC*EELGNK
Trigger: CTTATTTCCAAGTTCTTCTCAGCAAGGTCTTTCATT...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTGCCCCTTTCGGGTATaGCAGGGTCTGGACACATAT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMCPFRV*QGLDTY
Trigger: ATATGTGTCCAGACCCTGGCATACCCGAAAGGGGCA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTGTTCCCCCACACTGTaGAATACAGAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMCSPTL*NTEWRR
Trigger: CCTCCTCCACTCTGTATTGCACAGTGTGGGGGAACA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAACGGAAGAGGACTGTaGTTCCAACCTGGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMNGRGL*FQPGSP
Trigger: AGGGCTACCAGGTTGGAAGCACAGTCCTCTTCCGTT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGTGTGTTTCTGCAAGTaGACGCATGATGTAATAACA +
Preference number: 4 (lower is better)
Translates to: LWVSFIKALIPFMRALLSVCFCK*THDVIT
Trigger: TGTTATTACATCATGCGTGCACTTGCAGAAACACAC...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ATAACACTGTATAGTCACACCAGAGCAGATACTGTAGCAGATACTGCAGCAGATCAAAGTTACATAGCTTaGATGTGTCAGAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ITLYSHTRADTVADTAADQSYIA*MCQSQG
Trigger: ACCTTGGCTCTGACACATGCAAGCTATGTAACTTTG...ATCTGCTGCAGTATCTGCTACAGTATCTGCTCTGGTGTGACTATACAGTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGATTGGGGTAGCCATATaGGAACCCTGGGCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMIGVAI*EPWALN
Trigger: GTTGAGAGCCCAGGGTTCCCATATGGCTACCCCAAT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTTCTTAGCCGACCATTaGTTATTCTTTTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPFLADH*LFFWHV
Trigger: CACATGCCAAAAGAATAACCAATGGTCGGCTAAGAA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCTGAATTCCCTTCCCTaGCTGGGTCTGGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMLNSLP*LGLDGV
Trigger: TACTCCATCCAGACCCAGCCAGGGAAGGGAATTCAG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCACCCATCATCTCAGAATaGCTAAAAACTCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPPIISE*LKTPSK
Trigger: TTTGCTGGGAGTTTTTAGCCATTCTGAGATGATGGG...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAAACTTGGGGGTTCCTaGGTCCTCACATTTGATGAG +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPKLGGS*VLTFDE
Trigger: CTCATCAAATGTGAGGACCCAGGAACCCCCAAGTTT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATATCCCGGCTCACACTaGAAAGACACCACATCATTC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPYPGSH*KDTTSF
Trigger: GAATGATGTGGTGTCTTTCCAGTGTGAGCCGGGATA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTCCATGTCCGGTCCTTaGTGCAGCTCAGCACAGATA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMSMSGP*CSSAQI
Trigger: TATCTGTGCTGAGCTGCACCAAGGACCGGACATGGA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACCTCTCACTTTCCTCTaGCCACTCTTAACATCAGTC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPPLTFL*PLLTSV
Trigger: GACTGATGTTAAGAGTGGCCAGAGGAAAGTGAGAGG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAGCCTTCTGTCCCAGTaGCTTCCAGAAAGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMSLLSQ*LPESRN
Trigger: GTTACGACTTTCTGGAAGTCACTGGGACAGAAGGCT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCGCTGGATCCTAACCTaGAATCCGAGCCTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRWILT*NPSLVF
Trigger: AAAGACTAGGCTCGGATTTCAGGTTAGGATCCAGCG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGACAGCAAAGTACCCTaGGTGCCTGTGACTGAATTC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMDSKVP*VPVTEF
Trigger: GAATTCAGTCACAGGCACTCAGGGTACTTTGCTGTC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCAATTTGGTGAGAGGATaGCTCCAGATGGTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVNLVRG*LQMVLS
Trigger: TGACAGGACCATCTGGAGTCATCCTCTCACCAAATT...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp AGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTAGATACGCTGATATCTaGGTAGAAATGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RLQCGDSVGLFYKGTNPIRYADI*VEMKVE
Trigger: CTCTACCTTCATTTCTACTCAGATATCAGCGTATCT...AATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGATTCTTCATTCTCTGTaGCGACTTCGGCGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMILHSL*RLRRWG
Trigger: TCCCCAACGCCGAAGTCGTCACAGAGAATGAAGAAT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGGAAGTACTCCACTGTaGGGGAGATGTTATAGTCGG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMGSTPL*GRCYSR
Trigger: CCGACTATAACATCTCCCTCACAGTGGAGTACTTCC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCGATCATGGTGGCATTaGCCTTGCTGTTGGCAACTT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRSWWH*PCCWQL
Trigger: AAGTTGCCAACAGCAAGGTCAATGCCACCATGATCG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCTCTTCCATAGGACGTaGATGAAGGAGAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMLFHRT*MKERCV
Trigger: CACACACCTCTCCTTCATTCACGTCCTATGGAAGAG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATTCCCAGGACCCAAATaGCTTTTTAATCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPFPGPK*LFNPLG
Trigger: ACCCAGTGGATTAAAAAGTCATTTGGGTCCTGGGAA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGCCCAGGTTCATACATaGATGATTTGTAATGACTGT +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLAQVHT*MICNDC
Trigger: ACAGTCATTACAAATCATTCATGTATGAACCTGGGC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGATTGGTACACCACACTaGCCCGGTAGCTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMIGTPH*PGSCSS
Trigger: AGAACTACAGCTACCGGGGCAGTGTGGTGTACCAAT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCAGACCTGGCCACAGTaGTACTGTAGAGATTCATCG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMQTWPQ*YCRDSS
Trigger: CGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAAAGAGTCTCACTATGTTaGCCAGGTTCATACATGAAT +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQRVSLC*PGSYMN
Trigger: ATTCATGTATGAACCTGGGCAACATAGTGAGACTCT...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTTCTTGACTTGGTATTaGGCACTGAATCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMFLTWY*ALNPRC
Trigger: GCAGCGCGGATTCAGTGCCCAATACCAAGTCAAGAA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCCAAGCCACAGACTGCTaGATGTGCTGTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVQATDC*MCCSKS
Trigger: TGACTTTGAACAGCACATCCAGCAGTCTGTGGCTTG...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAGCTGTACATGGCCTTaGTTCCCACTGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMSCTWP*FPLCTP
Trigger: AGGAGTACACAGTGGGAACCAAGGCCATGTACAGCT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAATTCCCACACTCAGCTaGAAAGAGAATCACAATAAC +
Preference number: 4 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPIPTLS*KENHNN
Trigger: GTTATTGTGATTCTCTTTCCAGCTGAGTGTGGGAAT...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTACTCTTATCACTCTATaGGAAAGTCACAAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTTLITL*ESHKSK
Trigger: TTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGT...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp AGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTAGTGTGGTGATTCTGTaGGTCTCTTTTATAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RLQCGDSVGLFYKGTNPISVVIL*VSFIKA
Trigger: TGCCTTTATAAAAGAGACCCACAGAATCACCACACT...AATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAACTTAATGAGAACTTaGTTGGAGGTGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMNLMRT*LEVAKG
Trigger: GCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGCTCTGTCACAAAACTaGCAACTTGGATCTGGATGC +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMALSQN*QLGSGC
Trigger: GCATCCAGATCCAAGTTGTCAGTTTTGTGACAGAGC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAGCTGCAGATACGCTaGTATCTGAGTAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQLQIR*YLSRNE
Trigger: TTCATTTCTACTCAGATATCAGCGTATCTGCAGCTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR TCA 90 bp TATTTCTTCATTTGTAAAGTGGGGGTTAGAATATTTGCCTTACTACCTCACAGACAGGACCTGGTTGGATaGACTCTGCACTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: YFFICKVGVRIFALLPHRQDLVG*TLHCFL
Trigger: AAGAAAACAGTGCAGAGTTCATCCAACCAGGTCCTG...TCTGTGAGGTAGTAAGGCAAATATTCTAACCCCCACTTTACAAATGAAGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATGGTTACAGTGTTATCTaGACCATCAAATACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNGYSVI*TIKYFQ
Trigger: CTGGAAGTATTTGATGGTGCAGATAACACTGTAACC...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCTGCAGGACGTTGCTGTaGACACTGAAAATTGAATGG +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVCRTLL*TLKIEW
Trigger: CCATTCAATTTTCAGTGTCCACAGCAACGTCCTGCA...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TATTTCTTCATTTGTAAAGTGGGGGTTAGAATATTTGCCTTACTACCTCACAGAAGATACTGCGGAGGCTaGGTTCTGTTTCCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: YFFICKVGVRIFALLPHRRYCGG*VLFPVL
Trigger: TAGAACTGGAAACAGAACCCAGCCTCCGCAGTATCT...TCTGTGAGGTAGTAAGGCAAATATTCTAACCCCCACTTTACAAATGAAGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 72 bp GTTTCCAGTTCTATCCACATGGTTTTGGGCAAGTACTaGAGCCTTCCTTTGCCCTATTTCTTCATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: VSSSIHMVLGKY*SLPLPYFFICK
Trigger: TTTACAAATGAAGAAATAGGGCAAAGGAAGGCTCAAGTACTTGCCCAAAACCATGTGGATAGAACTGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATCAAACTCATCATATTaGTTCTCGCTGAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSNSSY*FSLRKY
Trigger: GTACTTCCTCAGCGAGAAGCAATATGATGAGTTTGA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACTCTGTCTTTACCTTTaGAGGCTTCTGTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLCLYL*RLLFSH
Trigger: ATGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATAGAGCAGCAATCCATTaGACTTGGATTTTTATCTTT +
Preference number: 4 (lower is better)
Translates to: PGKSRISWVLFQLPKREHRAAIH*TWIFIF
Trigger: AAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACAGAAGCTCATTTGTTaGACAGTGCACTTCACATAT +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPQKLIC*TVHFTY
Trigger: ATATGTGAAGTGCACTGTCCAACAAATGAGCTTCTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTCCACAGGGAATTCTTaGCAAAAACATCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMSTGNS*QKHPQE
Trigger: TTCCTGGGGATGTTTTTGCCAAGAATTCCCTGTGGA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CCA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGCAATCCATTGCACTTaGATTTTTATCTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLAIHCT*IFIFSG
Trigger: TCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAAGATTGTTCTACTTTTTaGTCCACATGGAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQDCSTF*STWKVE
Trigger: TTCTACTTTCCATGTGGACCAAAAAGTAGAACAATC...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR CAA 72 bp ATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTaGGTCCACATGGAAAGTAGAAGAGCAGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: IILFLHIGLFYF*VHMESRRAAIH
Trigger: ATGGATTGCTGCTCTTCTACTTTCCATGTGGACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR TCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCAGCTGCAGATACGCTaGTATCTGAGTAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMQLQIR*YLSRNE
Trigger: TTCATTTCTACTCAGATATCAGCGTATCTGCAGCTG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCGGTTACAGTGTTATCTaGACCATCAAATACTTCCAG +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVGYSVI*TIKYFQ
Trigger: CTGGAAGTATTTGATGGTGCAGATAACACTGTAACC...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCGAACACTATTTTCTTaGTGTCCAGGATCTGTACAG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRTLFS*CPGSVQ
Trigger: CTGTACAGATCCTGGACACCAAGAAAATAGTGTTCG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619121.4
3UTR CAA 72 bp CCTATTTCTTCATTTGTAAAGTGGGGGTTAGAATATTaGCCTTACTACCTCACAGAATTCTTACAGGTCACA +
Preference number: 4 (lower is better)
Translates to: PISSFVKWGLEY*PYYLTEFLQVT
Trigger: TGTGACCTGTAAGAATTCTGTGAGGTAGTAAGGCAAATATTCTAACCCCCACTTTACAAATGAAGAAATAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373377.1
3UTR CAA 72 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATaGTTCTACTTTTTGGTCCACATGGAAAGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIG*FYFLVHMESRR
Trigger: TCTTCTACTTTCCATGTGGACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR GCA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGGTTACAGTGTTATCTaGACCATCAAATACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMGYSVI*TIKYFQ
Trigger: CTGGAAGTATTTGATGGTGCAGATAACACTGTAACC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGAAAGTGGCCCTAAATaGTATACTTTGATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPESGPK*YTLIPK
Trigger: TTTAGGAATCAAAGTATAGCATTTAGGGCCACTTTC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR GCA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCTCATGCACATATCTTTaGATAATTCCCAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVSCTYL*IIPRSR
Trigger: CCTACTTCTGGGAATTATGCAAAGATATGTGCATGA...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
3UTR CAA 72 bp TCTCATCTGTCAAAGGGGAATAACAAATCCTACATTTaGGTGTTATTGTGCAGACTAGAAATACTACAGGTA +
Preference number: 4 (lower is better)
Translates to: SHLSKGNNKSYI*VLLCRLEILQV
Trigger: TACCTGTAGTATTTCTAGTCTGCACAATAACACCAAAATGTAGGATTTGTTATTCCCCTTTGACAGATGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.8
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp GGGTACAGATGGCCATGCTGTGTCCCACCAGGCGGTAGCCGGCGTTaGAGCCAAAGTGGATGGAGCCCCCGGGCTGGGTGCTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: GYRWPCCVPPGGSRR*SQSGWSPRAGCWSG
Trigger: GCCAGACCAGCACCCAGCCCGGGGGCTCCATCCACTTTGGCTGCAACGCCGGCTACCGCCTGGTGGGACACAGCATGGCCATCTGTACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp GGGTCGAGGTGCCCTCAACTTCGTAGCCCCCGTGGCAGTAGTAGGTaGCGGAGGAGCCCAGCTTCAGGTCGGACCCCACCCGTGTGCCGT +
Preference number: 5 (lower is better)
Translates to: GSRCPQLRSPRGSSR*RRSPASGRTPPVCR
Trigger: ACGGCACACGGGTGGGGTCCGACCTGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACGGGGGCTACGAAGTTGAGGGCACCTCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp CGCTCCACAGGTGGTAGCCCTGGGGGTGCCGGGTACAGATGGCCATaGTGTGTCCCACCAGGCGGTAGCCGGCGTTGCAGCCAAAGTGGA +
Preference number: 5 (lower is better)
Translates to: RSTGGSPGGAGYRWP*CVPPGGSRRCSQSG
Trigger: TCCACTTTGGCTGCAACGCCGGCTACCGCCTGGTGGGACACAGCATGGCCATCTGTACCCGGCACCCCCAGGGCTACCACCTGTGGAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp TGGCTTCGCTCCACAGGTGGTAGCCCTGGGGGTGCCGGGTACAGATaGCCATGCTGTGTCCCACCAGGCGGTAGCCGGCGTTGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: WLRSTGGSPGGAGYR*PCCVPPGGSRRCSQ
Trigger: TTGGCTGCAACGCCGGCTACCGCCTGGTGGGACACAGCATGGCCATCTGTACCCGGCACCCCCAGGGCTACCACCTGTGGAGCGAAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GGGGCGGGGACGGTCCCATGTGCCATCTCCCTGGCAGCTGAGCACTaGGGTGCCCAGGAGGTAGAAGCCGTGGTTGCACCGGTAAGACAC +
Preference number: 5 (lower is better)
Translates to: GAGTVPCAISLAAEH*GAQEVEAVVAPVRH
Trigger: GTGTCTTACCGGTGCAACCACGGCTTCTACCTCCTGGGCACCCCAGTGCTCAGCTGCCAGGGAGATGGCACATGGGACCGTCCCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS TCA 90 bp ACGGCTCTGGGAAGCCAGGGGACAGGATGGTGCCCCTGCGCTCTGTaGGGTTGCCTCCACACGGCACCACACACGTGGGCGCTGAGACAT +
Preference number: 5 (lower is better)
Translates to: TALGSQGTGWCPCAL*GCLHTAPHTWALRH
Trigger: ATGTCTCAGCGCCCACGTGTGTGGTGCCGTGTGGAGGCAACCTCACAGAGCGCAGGGGCACCATCCTGTCCCCTGGCTTCCCAGAGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GCGACCCCTGCAGGGCATAGCCGGAGTTGCATTCGAAGCGGACGATaGCCCCCACCGAGAAGTCACTGCCCAGCCTCTTGCCATAGCGGG +
Preference number: 5 (lower is better)
Translates to: ATPAGHSRSCIRSGR*PPPRSHCPASCHSG
Trigger: CCCGCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCCTGCAGGGGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GTAGCCCATGGAGGGCAAATCCAGGGCCCCGACGTTGGCATGCGTTaGCGTCTCTGGCTGCCTGCAGTGGTGGGGGACACAGTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VAHGGQIQGPDVGMR*RLWLPAVVGDTVRW
Trigger: CCACCTGACTGTGTCCCCCACCACTGCAGGCAGCCAGAGACGCCAACGCATGCCAACGTCGGGGCCCTGGATTTGCCCTCCATGGGCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAAGGGTGGCCAGTCAATaGATACCCCGGGAGGCACTC +
Preference number: 5 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSRVASQ*IPREAL
Trigger: GAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACCGGTTGGTGCCATGTaGACACGTGAGGACAGGGTG +
Preference number: 5 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSPVGAM*TREDRV
Trigger: CACCCTGTCCTCACGTGTCAACATGGCACCAACCGG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp TGGCCAAGGGCAGTGATTCTCCTGTATGGGAGCCCGAGAGGGAGCTaGGGAGCCGCGAGTGCTGGCTGTGGCCGTCGTGAACCTCCACCA +
Preference number: 5 (lower is better)
Translates to: WPRAVILLYGSPRGS*GAASAGCGRREPPP
Trigger: TGGTGGAGGTTCACGACGGCCACAGCCAGCACTCGCGGCTCCTCAGCTCCCTCTCGGGCTCCCATACAGGAGAATCACTGCCCTTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp AGGCTGCGAGCCGCTCCACGAGCCATTGGCTTGACAGGTGCGCTCTaGCGATCCCCGGAGCACGTGGCCAGCTTCACAGCTGAAGCGCAT +
Preference number: 5 (lower is better)
Translates to: RLRAAPRAIGLTGAL*RSPEHVASFTAEAH
Trigger: ATGCGCTTCAGCTGTGAAGCTGGCCACGTGCTCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCGGCTCGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp GGAGGCACTCGATCTCTGGCGACCCCTGCAGGGCATAGCCGGAGTTaGATTCGAAGCGGACGATGGCCCCCACCGAGAAGTCACTGCCCA +
Preference number: 5 (lower is better)
Translates to: GGTRSLATPAGHSRS*IRSGRWPPPRSHCP
Trigger: TGGGCAGTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCCTGCAGGGGTCGCCAGAGATCGAGTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CGGACGCCATGGCCAATGGGCACGGTGATCAGCCAGACACAGTCCTaGGAGCTGGAGTACGGGCTAGGGAACCCCGGGGAGTACACAGTG +
Preference number: 5 (lower is better)
Translates to: RTPWPMGTVISQTQS*ELEYGLGNPGEYTV
Trigger: CACTGTGTACTCCCCGGGGTTCCCTAGCCCGTACTCCAGCTCCCAGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCCATGGCGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CCAGAGGGCTCTGTCTGCAGCAGGCTGAGGTTGAGGCGGACGCCATaGCCAATGGGCACGGTGATCAGCCAGACACAGTCCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PEGSVCSRLRLRRTP*PMGTVISQTQSWEL
Trigger: CAGCTCCCAGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS CCA 90 bp GGCACCAGGATCGCGGCTGCCACTGAGCTGCTGTTGGAAGCAAAGTaGCGGCCAATGGACTCGGGGTCTGACTCCAGCAGCCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GTRIAAATELLLEAK*RPMDSGSDSSSLRS
Trigger: GGACCTCAGGCTGCTGGAGTCAGACCCCGAGTCCATTGGCCGCCACTTTGCTTCCAACAGCAGCTCAGTGGCAGCCGCGATCCTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGTGGTGGCTTTGAACTaGCCATCTAGGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPVVALN*PSRAGG
Trigger: GCCCCCGGCCCTAGATGGCAAGTTCAAAGCCACCAC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAACTCAGCAACACACCTaGGCAGAGGCGAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSTQQHT*AEASST
Trigger: TGTGGAGCTCGCCTCTGCCAAGGTGTGTTGCTGAGT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGGGAGCGATGCATGTaGGCGGGCTGGGCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPRERCM*AGWAAR
Trigger: TCTGGCAGCCCAGCCCGCCAACATGCATCGCTCCCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAGCTTTGCAGACGGGCTaGGTTCCATTCCATGTCCGG +
Preference number: 5 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSALQTG*VPFHVR
Trigger: CCGGACATGGAATGGAACCAAGCCCGTCTGCAAAGC...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCCCAGGAATCAAGGCTaGGGTGAGCGGTGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPPRNQG*GERWLP
Trigger: CGGGAGCCACCGCTCACCCAAGCCTTGATTCCTGGG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCTGCTGCCCCCAGACTaGGCATCCTGTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLLPPD*ASCLGH
Trigger: GTGGCCCAGACAGGATGCCAAGTCTGGGGGCAGCAG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp ATCACTCCACACTCAGGCTGCGAGCCGCTCCACGAGCCATTGGCTTaGCAGGTGCGCTCTGACGATCCCCGGAGCACGTGGCCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: ITPHSGCEPLHEPLA*QVRSDDPRSTWPAS
Trigger: TGAAGCTGGCCACGTGCTCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCGGCTCGCAGCCTGAGTGTGGAGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp AACACTGAGGCAGCTCTCCGGTCCAGGACCCATTTCCCTCACAGGTaGACACCGCGGGCAGGGAGAGCTGGTACCCCTCCAGGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: NTEAALRSRTHFPHR*TPRAGRAGTPPGRH
Trigger: ATGCCTGCCTGGAGGGGTACCAGCTCTCCCTGCCCGCGGTGTTCACCTGTGAGGGAAATGGGTCCTGGACCGGAGAGCTGCCTCAGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp GGTCGGATCTATGCAGCTGGGCTGGGTGCCACTCCATGTCCCATCTaGCTGGCAAAACCTGCGTGGAGAGCCCACCAGCACCAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GRIYAAGLGATPCPI*LAKPAWRAHQHQRG
Trigger: CCCCCTCTGGTGCTGGTGGGCTCTCCACGCAGGTTTTGCCAGTCAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCATAGATCCGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp TACAGAGTGGAGGAGGGTAGTTCCATCGCCGCACTGTTCCGGGCATaGAGGAGATGTGGGCGTGGCCCTGGAGGGCATATCCCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: YRVEEGSSIAALFRA*RRCGRGPGGHIPAH
Trigger: GTGAGCCGGGATATGCCCTCCAGGGCCACGCCCACATCTCCTGCATGCCCGGAACAGTGCGGCGATGGAACTACCCTCCTCCACTCTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CATCCTTGTAGAAGCCAGGCCAGCCCGGAGAGAGGATGGTGCCGCTaGGCGAAGTCAGGTGACCACCACAGGGAGCTTCACACCGCAGCA +
Preference number: 5 (lower is better)
Translates to: HPCRSQASPERGWCR*AKSGDHHRELHTAA
Trigger: TGCTGCGGTGTGAAGCTCCCTGTGGTGGTCACCTGACTTCGCCCAGCGGCACCATCCTCTCTCCGGGCTGGCCTGGCTTCTACAAGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp AAGAGATCACTCCACACTCAGGCTGCGAGCCGCTCCACGAGCCATTaGCTTGACAGGTGCGCTCTGACGATCCCCGGAGCACGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: KRSLHTQAASRSTSH*LDRCALTIPGARGQ
Trigger: CTGGCCACGTGCTCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCGGCTCGCAGCCTGAGTGTGGAGTGATCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGTGGTGGCTTTGAACTaGCCATCTAGGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEVVALN*PSRAGG
Trigger: GCCCCCGGCCCTAGATGGCAAGTTCAAAGCCACCAC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCAACCTTGTCACCGAGGTaGAAGGTTGAACCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSTLSPR*KVEPCW
Trigger: CCAGCAGGGTTCAACCTTCAACCTCGGTGACAAGGT...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCGCGCTGCCGGTGGTaGCCATCCGATGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCPRCRW*PSDVKC
Trigger: GCACTTCACATCGGATGGCAACCACCGGCAGCGCGG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCCGGTTGGTGCCATGTaGACACGTGAGGACAGGGTG +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPPVGAM*TREDRV
Trigger: CACCCTGTCCTCACGTGTCAACATGGCACCAACCGG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGCAGCAGGCTGAGGTaGAGGCGGACGCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAECSRLR*RRTPWP
Trigger: TGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAGCCGTGGTGCTGTTaGCTGTGGCCCATCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPEPWCC*LWPIPD
Trigger: ATCTGGGATGGGCCACAGCAAACAGCACCACGGCTC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGTGACGACTTCGGCGTaGGGGAGGATGGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPVTTSA*GRMVGG
Trigger: TCCTCCCACCATCCTCCCCAACGCCGAAGTCGTCAC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCATTCCATGTCCGGTCCTaGGTGCAGCTCAGCACAGAT +
Preference number: 5 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSFHVRS*VQLSTD
Trigger: ATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAA...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCGACGTTGGCATGCGTaGGCGTCTCTGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAERRWHA*ASLAAC
Trigger: GCAGGCAGCCAGAGACGCCAACGCATGCCAACGTCG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGCTCGGAGCCACCCTaGAGGGAGAAGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAECSEPP*REKPSW
Trigger: CCAGGAGGGCTTCTCCCTCAAGGGTGGCTCCGAGCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGGCAGATGGGCGGCTaGCCTGTCCAGCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCRQMGG*PVQLPS
Trigger: GGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCCT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCCAGGAATCAAGGCTaGGGTGAGCGGTGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCPRNQG*GERWLP
Trigger: CGGGAGCCACCGCTCACCCAAGCCTTGATTCCTGGG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGACCTGCCAGGTCTTTaGCTGGCTATGGTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPDLPGL*LAMVSG
Trigger: GCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGTC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACCCGCTGGCCAGGCATaGGGACCTAGCAGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGPAGQA*GPSSPL
Trigger: GAGGGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS TCA 90 bp TGGGCAGGGGGTGGTCCCAGTTCCGGTTGGTGCCATGTTGACACGTaGGGACAGGGTGGCCAGTCAATTGATACCCCGGGAGGCACTCGA +
Preference number: 5 (lower is better)
Translates to: WAGGGPSSGWCHVDT*GQGGQSIDTPGGTR
Trigger: TCGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCTGTCCTCACGTGTCAACATGGCACCAACCGGAACTGGGACCACCCCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp TGGGCACTGAATCCGCGCTGCCGGTGGTTGCCATCCGATGTGAAGTaGAGTCGCAGCCAGTTCTTGCTGCTGATAACGGGGGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: WALNPRCRWLPSDVK*SRSQFLLLITGAGR
Trigger: CCTCCCAGCCCCCGTTATCAGCAGCAAGAACTGGCTGCGACTGCACTTCACATCGGATGGCAACCACCGGCAGCGCGGATTCAGTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp TCAAGGCATCCTTGTAGAAGCCAGGCCAGCCCGGAGAGAGGATGGTaGCGCTGGGCGAAGTCAGGTGACCACCACAGGGAGCTTCACACC +
Preference number: 5 (lower is better)
Translates to: SRHPCRSQASPERGW*RWAKSGDHHRELHT
Trigger: GGTGTGAAGCTCCCTGTGGTGGTCACCTGACTTCGCCCAGCGGCACCATCCTCTCTCCGGGCTGGCCTGGCTTCTACAAGGATGCCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp AGAAGGTCAAGGTGTCGCCCACGCCAAACTGCAAGCCCTTCCGGATaGTGTAGGCTGGGACCTCGGGCTCCTCACAGGGCTCCAAGTCGT +
Preference number: 5 (lower is better)
Translates to: RRSRCRPRQTASPSG*CRLGPRAPHRAPSR
Trigger: ACGACTTGGAGCCCTGTGAGGAGCCCGAGGTCCCAGCCTACAGCATCCGGAAGGGCTTGCAGTTTGGCGTGGGCGACACCTTGACCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp GAGGGAGGGAGCCAGTCCAGTGTCCATCCAGCCCACACATGCGGGTaGTGTTTCCCACCAGAGTACGCTTGCCGATGCAGCTGTACCGCA +
Preference number: 5 (lower is better)
Translates to: EGGSQSSVHPAHTCG*CFPPEYACRCSCTA
Trigger: TGCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGGGAAACAGCACCCGCATGTGTGGGCTGGATGGACACTGGACTGGCTCCCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp ACGGGCCCCTGCCTCTCAGTGAAGACCCTGGCGTGGCCTCCTCCCTaGTCACTTACACACGCAGCCTGGCTTCTTAGCCGACCATTGGTT +
Preference number: 5 (lower is better)
Translates to: TGPCLSVKTLAWPPP*SLTHAAWLLSRPLV
Trigger: AACCAATGGTCGGCTAAGAAGCCAGGCTGCGTGTGTAAGTGAGCAGGGAGGAGGCCACGCCAGGGTCTTCACTGAGAGGCAGGGGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS CCA 90 bp AGCTCAAGGCATCCTTGTAGAAGCCAGGCCAGCCCGGAGAGAGGATaGTGCCGCTGGGCGAAGTCAGGTGACCACCACAGGGAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: SSRHPCRSQASPERG*CRWAKSGDHHRELH
Trigger: GTGAAGCTCCCTGTGGTGGTCACCTGACTTCGCCCAGCGGCACCATCCTCTCTCCGGGCTGGCCTGGCTTCTACAAGGATGCCTTGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CCGGAGCACGTGGCCAGCTTCACAGCTGAAGCGCATCACAGTGCCTaGATCAAAGCTGTCCCCCAAACGGATGCCATGAGCCGGGATCCC +
Preference number: 5 (lower is better)
Translates to: PEHVASFTAEAHHSA*IKAVPQTDAMSRDP
Trigger: GGGATCCCGGCTCATGGCATCCGTTTGGGGGACAGCTTTGATCCAGGCACTGTGATGCGCTTCAGCTGTGAAGCTGGCCACGTGCTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GGATCTATGCAGCTGGGCTGGGTGCCACTCCATGTCCCATCTGACTaGCAAAACCTGCGTGGAGAGCCCACCAGCACCAGAGGGGGATGG +
Preference number: 5 (lower is better)
Translates to: GSMQLGWVPLHVPSD*QNLRGEPTSTRGGW
Trigger: CCATCCCCCTCTGGTGCTGGTGGGCTCTCCACGCAGGTTTTGCCAGTCAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCATAGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GTGGTGGGGGACACAGTCAGGTGGGGTTCCACTCCAGGTCAGGTTTaGGAGGCAGGTCCTGGTGGTGGAGCCCTGAAGCAGGTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: VVGDTVRWGSTPGQV*EAGPGGGALKQVAF
Trigger: AAAGGCTACCTGCTTCAGGGCTCCACCACCAGGACCTGCCTCCCAAACCTGACCTGGAGTGGAACCCCACCTGACTGTGTCCCCCACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACTGTCCCCAAACCGTTaGCCATTTACTGGAACGCCA +
Preference number: 5 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSLSPNR*PFTGTP
Trigger: TGGCGTTCCAGTAAATGGCAAACGGTTTGGGGACAG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGGATCCCAGGGTCATaGCAGGACGTTGCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGIPGS*QDVAVD
Trigger: GTCCACAGCAACGTCCTGCAATGACCCTGGGATCCC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACGCAGGTACACAGAGTaGCTTGAGCTGGTGACAATC +
Preference number: 5 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSRRYTE*LELVTI
Trigger: GATTGTCACCAGCTCAAGCAACTCTGTGTACCTGCG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCCACCAGAGTACGCTaGCCGATGCAGCTGTACCGC +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCPTRVR*PMQLYR
Trigger: GCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGGG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCACTCCAGGTCAGGTTaGGGAGGCAGGTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEHSRSG*GGRSWW
Trigger: CCACCAGGACCTGCCTCCCAAACCTGACCTGGAGTG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTCCAGGGCCCCGACGTaGGCATGCGTTGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSRAPT*ACVGVS
Trigger: AGAGACGCCAACGCATGCCAACGTCGGGGCCCTGGA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTGCTCGGAGCCACCCTaGAGGGAGAAGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRCSEPP*REKPSW
Trigger: CCAGGAGGGCTTCTCCCTCAAGGGTGGCTCCGAGCA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCAGCTGCCATCCGCCTaGCAGGTGCGGTGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCQLPSA*QVRCSE
Trigger: CTCCGAGCACCGCACCTGCAAGGCGGATGGCAGCTG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGGGAGGCCTGGGGAGTaGAATCCTTGCCCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEGRPGE*NPCPEA
Trigger: AGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGTGAGTGTGTCTGGATaGGCCCTCTCCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEVSVSG*ALSLQA
Trigger: GGCCTGGAGGGAGAGGGCCAATCCAGACACACTCAC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCTGGGTCTCCTCCCGCCTaGGAGGGGTTGAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: AAVVTTCKVPRDGAPGLAGSPPA*EGLSAV
Trigger: CACAGCACTCAACCCCTCCAAGGCGGGAGGAGACCC...AGCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS TCA 90 bp AGTGGTCAGTCTGGAACTCGAGACGGGCCACGTGGCCACTGCTTGTaGTGGAGGAGGGAAGCTGGTTTCCTGAGAAGGTGCCCAGGACGG +
Preference number: 5 (lower is better)
Translates to: SGQSGTRDGPRGHCL*WRREAGFLRRCPGR
Trigger: CCGTCCTGGGCACCTTCTCAGGAAACCAGCTTCCCTCCTCCATCACAAGCAGTGGCCACGTGGCCCGTCTCGAGTTCCAGACTGACCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp AGGTGCGCTCTGACGATCCCCGGAGCACGTGGCCAGCTTCACAGCTaGAGCGCATCACAGTGCCTGGATCAAAGCTGTCCCCCAAACGGA +
Preference number: 5 (lower is better)
Translates to: RCALTIPGARGQLHS*SASQCLDQSCPPNG
Trigger: TCCGTTTGGGGGACAGCTTTGATCCAGGCACTGTGATGCGCTTCAGCTGTGAAGCTGGCCACGTGCTCCGGGGATCGTCAGAGCGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp GAGTGTGTCACCGTGGTGAAACCGGGAGCCTTCCCTCCGGCCATATaGAGGTATGCCAGGGTCACCGCAACTGCCCTGCTCGATCTCTTC +
Preference number: 5 (lower is better)
Translates to: ECVTVVKPGAFPPAI*RYARVTATALLDLF
Trigger: GAAGAGATCGAGCAGGGCAGTTGCGGTGACCCTGGCATACCTGCATATGGCCGGAGGGAAGGCTCCCGGTTTCACCACGGTGACACACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000338325.1
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp AGTCACTGCCCAGCCTCTTGCCATAGCGGGGTTCCGGCACAGAGCTaGACTGCGTGGCGCTGGTTCGAGGAACCGCTTGGTAGACAAAGT +
Preference number: 5 (lower is better)
Translates to: SHCPASCHSGVPAQS*TAWRWFEEPLGRQS
Trigger: ACTTTGTCTACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTGTGCCGGAACCCCGCTATGGCAAGAGGCTGGGCAGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp TGTGGCCCATCCCAGATGGTGATGAAATCTCCAGAGGGCTCTGTCTaGAGCAGGCTGAGGTTGAGGCGGACGCCATGGCCAATGGGCACG +
Preference number: 5 (lower is better)
Translates to: CGPSQMVMKSPEGSV*SRLRLRRTPWPMGT
Trigger: CGTGCCCATTGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCTGGAGATTTCATCACCATCTGGGATGGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS GCA 90 bp AGCAGTGAGGGAGGGAGCCAGTCCAGTGTCCATCCAGCCCACACATaGGGGTGCTGTTTCCCACCAGAGTACGCTTGCCGATGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SSEGGSQSSVHPAHT*GCCFPPEYACRCSC
Trigger: ACAGCTGCATCGGCAAGCGTACTCTGGTGGGAAACAGCACCCGCATGTGTGGGCTGGATGGACACTGGACTGGCTCCCTCCCTCACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CACAGAGAGCTTCACAACTGGGCAGGGCCCGGCTCCACTGGAAGTTaGGCTCACACTCCAGAGGCTCCCCGTCACTTAATGTGTAGCCCG +
Preference number: 5 (lower is better)
Translates to: HRELHNWAGPGSTGS*AHTPEAPRHLMCSP
Trigger: CGGGCTACACATTAAGTGACGGGGAGCCTCTGGAGTGTGAGCCCAACTTCCAGTGGAGCCGGGCCCTGCCCAGTTGTGAAGCTCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CTGCACTTCCCTGCAGCGCGTAGCCAGGGTCACACTGGAACACTGTaGAGTCGCCGGCTTCCCAACTGTCACCACTCCGACTCCCATTCT +
Preference number: 5 (lower is better)
Translates to: LHFPAARSQGHTGTL*SRRLPNCHHSDSHS
Trigger: AGAATGGGAGTCGGAGTGGTGACAGTTGGGAAGCCGGCGACTCCACAGTGTTCCAGTGTGACCCTGGCTACGCGCTGCAGGGAAGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CTGCAGGTGGGCAGCATGTCACTCCATTGCCCGCTGGCCAGGCATTaGGACCTAGCAGCCCCCTCAGCCATATACCCAGGGTTGCAAACA +
Preference number: 5 (lower is better)
Translates to: LQVGSMSLHCPLARH*DLAAPSAIYPGLQT
Trigger: TGTTTGCAACCCTGGGTATATGGCTGAGGGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCCCACCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTCCGAGCCTAGTCTTTaGCCCCTTTCGGGTATGCCA +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPSEPSL*PLSGMP
Trigger: TGGCATACCCGAAAGGGGCAAAAGACTAGGCTCGGA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGACGGGCTGGTGAAGTaGAAGAAGCAGGAGAACACG +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPDGLVK*KKQENT
Trigger: CGTGTTCTCCTGCTTCTTCAACTTCACCAGCCCGTC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCCACGTCAATGTCGTaGAAGGCCAGGTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSTSMS*KARWMR
Trigger: CCGCATCCACCTGGCCTTCAACGACATTGACGTGGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATGCAGGACGACCGAGTaGAAGGTGCTATGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPECRTTE*KVLCRS
Trigger: GGACCTGCATAGCACCTTCAACTCGGTCGTCCTGCA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGGATCCCAGGGTCATaGCAGGACGTTGCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGIPGS*QDVAVD
Trigger: GTCCACAGCAACGTCCTGCAATGACCCTGGGATCCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGCGAGGAAGAGGCTGTaGCTGCTGCTTTCAATGCGG +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEARKRL*LLLSMR
Trigger: CCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGCTGGTGCGAGGCCTTaGGCGCTGAACTTAATGAGA +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPAGARP*ALNLMR
Trigger: TCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGAGCCGTGGTGCTGTTaGCTGTGGCCCATCCCAGAT +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGEPWCC*LWPIPD
Trigger: ATCTGGGATGGGCCACAGCAAACAGCACCACGGCTC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACACTGTGGTGGGACATaGCGGTTGCTCCATAGGCCT +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEHCGGT*RLLHRP
Trigger: AGGCCTATGGAGCAACCGCAATGTCCCACCACAGTG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCAGGAGAAGATGGCTGTaGCCCCGTAGACAGACAGTG +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPRRRWL*PRRQTV
Trigger: CACTGTCTGTCTACGGGGCAACAGCCATCTTCTCCT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGAAGCCAGCATTGCATaGGTACACCACACTGCCCCG +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEEASIA*VHHTAP
Trigger: CGGGGCAGTGTGGTGTACCAATGCAATGCTGGCTTC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCCACCAGAGTACGCTaGCCGATGCAGCTGTACCGC +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPTRVR*PMQLYR
Trigger: GCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGCTTTGCAGACGGGCTaGGTTCCATTCCATGTCCGG +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEALQTG*VPFHVR
Trigger: CCGGACATGGAATGGAACCAAGCCCGTCTGCAAAGC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTCCAGGGCCCCGACGTaGGCATGCGTTGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKESRAPT*ACVGVS
Trigger: AGAGACGCCAACGCATGCCAACGTCGGGGCCCTGGA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAGGCAGATGGGCGGCTaGCCTGTCCAGCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGRQMGG*PVQLPS
Trigger: GGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCCT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAGGCAGATGGGCGGCTaGCCTGTCCAGCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKERQMGG*PVQLPS
Trigger: GGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCCT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTCTGTGGGCTGGATGTaGCGGTCGTACATTGGGTTC +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPSVGWM*RSYIGF
Trigger: GAACCCAATGTACGACCGCAACATCCAGCCCACAGA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGGGAGGCCTGGGGAGTaGAATCCTTGCCCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGGRPGE*NPCPEA
Trigger: AGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTACAGGGGCTTAAGCTaGTGGGGGCCTTCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEYRGLS*WGPSRG
Trigger: TCCTCGGGAAGGCCCCCACAAGCTTAAGCCCCTGTA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCAGCATGTCACTCCATaGCCCGCTGGCCAGGCATTG +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCQHVTP*PAGQAL
Trigger: CAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS TCA 90 bp ACTCCTTGCCTGGCGGGTAGGGTTCTGGGTAATTTGGTGAGAGGATaGCTCCAGATGGTCCTGTCAGGTCTCCCCCGCAGGGAGCGATGC +
Preference number: 5 (lower is better)
Translates to: TPCLAGRVLGNLVRG*LQMVLSGLPRRERC
Trigger: GCATCGCTCCCTGCGGGGGAGACCTGACAGGACCATCTGGAGTCATCCTCTCACCAAATTACCCAGAACCCTACCCGCCAGGCAAGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp CCAGTCACACTCCTTGCCTGGCGGGTAGGGTTCTGGGTAATTTGGTaGGAGGATGACTCCAGATGGTCCTGTCAGGTCTCCCCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: PVTLLAWRVGFWVIW*EDDSRWSCQVSPAG
Trigger: CCCTGCGGGGGAGACCTGACAGGACCATCTGGAGTCATCCTCTCACCAAATTACCCAGAACCCTACCCGCCAGGCAAGGAGTGTGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp CGCAATAATGAGGGCGATGAAAGGCACCAGGATCGCGGCTGCCACTaGGCTGCTGTTGGAAGCAAAGTGGCGGCCAATGGACTCGGGGTC +
Preference number: 5 (lower is better)
Translates to: RNNEGDERHQDRGCH*AAVGSKVAANGLGV
Trigger: GACCCCGAGTCCATTGGCCGCCACTTTGCTTCCAACAGCAGCTCAGTGGCAGCCGCGATCCTGGTGCCTTTCATCGCCCTCATTATTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp GCTGGGGAGAACTTCATAGGTGGCGTGGAAGCCTTGGGCACTGACTaGATAGTCGCTGATGAGGCGCAGAGAGAGGGTGGTGGCTGCACT +
Preference number: 5 (lower is better)
Translates to: AGENFIGGVEALGTD*IVADEAQREGGGCT
Trigger: AGTGCAGCCACCACCCTCTCTCTGCGCCTCATCAGCGACTATGCAGTCAGTGCCCAAGGCTTCCACGCCACCTATGAAGTTCTCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp GTCAGGTCTCCCCCGCAGGGAGCGATGCATGTTGGCGGGCTGGGCTaGCAGAAGAACCTGTTCTCGATCTTCACACAGCTGATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: VRSPPQGAMHVGGLG*QKNLFSIFTQLISA
Trigger: TGCAGAGATCAGCTGTGTGAAGATCGAGAACAGGTTCTTCTGGCAGCCCAGCCCGCCAACATGCATCGCTCCCTGCGGGGGAGACCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp AAGCCACCACAGAGAGCTTCACAACTGGGCAGGGCCCGGCTCCACTaGAAGTTGGGCTCACACTCCAGAGGCTCCCCGTCACTTAATGTG +
Preference number: 5 (lower is better)
Translates to: KPPQRASQLGRARLH*KLGSHSRGSPSLNV
Trigger: CACATTAAGTGACGGGGAGCCTCTGGAGTGTGAGCCCAACTTCCAGTGGAGCCGGGCCCTGCCCAGTTGTGAAGCTCTCTGTGGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTCTGGCCAGCTGATCTaGGGTGGTGGCTTTGAACTT +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPSGQLI*GGGFEL
Trigger: AAGTTCAAAGCCACCACCCAAGATCAGCTGGCCAGA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGACGTCTTCTGGCTGTaGTCTTTGCTGGGCATCAGC +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPDVFWL*SLLGIS
Trigger: GCTGATGCCCAGCAAAGACAACAGCCAGAAGACGTC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGATCCGCTTGGACCCTaGCAGGTCATAGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEDPLGP*QVIALV
Trigger: AACGAGGGCTATGACCTGCAAGGGTCCAAGCGGATC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCATCACCTTGGAGGGGTaGAGTGCTGTGATGATCCAC +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPITLEG*SAVMIH
Trigger: GTGGATCATCACAGCACTCAACCCCTCCAAGGTGAT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGCGAGCTTGATCACCTaGGAGGGGTTGAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCASLIT*EGLSAV
Trigger: CACAGCACTCAACCCCTCCAAGGTGATCAAGCTCGC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATCCTCAAAGGCGAGCTaGATCACCTTGGAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPESSKAS*ITLEGL
Trigger: CAACCCCTCCAAGGTGATCAAGCTCGCCTTTGAGGA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTCCACGTCAATGTCGTaGAAGGCCAGGTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGSTSMS*KARWMR
Trigger: CCGCATCCACCTGGCCTTCAACGACATTGACGTGGA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGTCCCACTGGAGCCTaGAATGAAGCCACCACAGAG +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGPTGA*NEATTE
Trigger: CTCTGTGGTGGCTTCATTCAAGGCTCCAGTGGGACC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGCAGGACGACCGAGTaGAAGGTGCTATGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCCRTTE*KVLCRS
Trigger: GGACCTGCATAGCACCTTCAACTCGGTCGTCCTGCA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCATGACGAAGCCAGCATaGCTCACAGATGCATCGCTG +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPMTKPA*LTDASL
Trigger: CAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCAT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACAGACTGGCCGGGGATaGTTCCACACGGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGQTGRG*FHTGFP
Trigger: TGGGAAGCCCGTGTGGAACAATCCCCGGCCAGTCTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGGTTCGAGGAACCGCTaGGTAGACAAAGTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPGSRNR*VDKVEA
Trigger: GGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACTGCGCTCTGTGAGGTaGCCTCCACACGGCACCACA +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLRSVR*PPHGTT
Trigger: TGTGGTGCCGTGTGGAGGCAACCTCACAGAGCGCAG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCCACAAAACTGACAACTaGGATCTGGATGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPHKTDN*DLDASA
Trigger: GGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGTG...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGAAGGGCAGGCACGGTaGTTCCTGAGAAACTCCCCA +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCEGQAR*FLRNSP
Trigger: TGGGGAGTTTCTCAGGAACAACCGTGCCTGCCCTTC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCCCCTCACAATGCCATaGGCAAAGGGCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCPLTMP*AKGSGS
Trigger: AGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGAGCCGTGGTGCTGTTaGCTGTGGCCCATCCCAGAT +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGEPWCC*LWPIPD
Trigger: ATCTGGGATGGGCCACAGCAAACAGCACCACGGCTC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAACACCATTCCATTCTaGGGGGCCTCAGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPENTIPF*GASGSP
Trigger: TGGGCTTCCTGAGGCCCCCAAGAATGGAATGGTGTT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGGTGGGACATTGCGGTaGCTCCATAGGCCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRGGTLR*LHRPVS
Trigger: GGACACAGGCCTATGGAGCAACCGCAATGTCCCACC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCACAGCGGATGACCCTTaGGCCAGTATAGTAGTAGCC +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPTADDP*ASIVVA
Trigger: GGCTACTACTATACTGGCCAAAGGGTCATCCGCTGT...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGGAGAAGATGGCTGTaGCCCCGTAGACAGACAGTG +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPRRRWL*PRRQTV
Trigger: CACTGTCTGTCTACGGGGCAACAGCCATCTTCTCCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGGCGGAAGCCAGCATaGCATTGGTACACCACACTG +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPRRKPA*HWYTTL
Trigger: CAGTGTGGTGTACCAATGCAATGCTGGCTTCCGCCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTTGTACCTGAAGTCATaGCCCAGCCGAAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPLYLKS*PSRRPL
Trigger: CAATGGCCTTCGGCTGGGCAATGACTTCAGGTACAA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTTGCACATGAGAGCTTaGCAGACGGGCTTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPLHMRA*QTGLVP
Trigger: TGGAACCAAGCCCGTCTGCAAAGCTCTCATGTGCAA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCATGAGCGGAGGTGGCTaGCACATGAGAGCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPMSGGG*HMRALQ
Trigger: CTGCAAAGCTCTCATGTGCAAGCCACCTCCGCTCAT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCACTCCAGGTCAGGTTaGGGAGGCAGGTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCHSRSG*GGRSWW
Trigger: CCACCAGGACCTGCCTCCCAAACCTGACCTGGAGTG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGCATTGACCTTGCTGTaGGCAACTTGGAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPALTLL*ATWKPV
Trigger: GACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGC...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGCCCTTGACAGAGCCTaGGTAGATGAAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCALDRA*VDEGGS
Trigger: GGAGCCACCTTCATCTACCAAGGCTCTGTCAAGGGC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGAACTGCCCAAAGCCTaGGCCCTTGACAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEELPKA*ALDRAL
Trigger: CAAGGCTCTGTCAAGGGCCAAGGCTTTGGGCAGTTC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCTGTGGGCTGGATGTaGCGGTCGTACATTGGGTTC +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSVGWM*RSYIGF
Trigger: GAACCCAATGTACGACCGCAACATCCAGCCCACAGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCAGCCAGACTTGACCTaGGGCTCCTGGCCAGACTCC +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEQPDLT*GSWPDS
Trigger: GGAGTCTGGCCAGGAGCCCAAGGTCAAGTCTGGCTG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGGAGGCCTGGGGAGTaGAATCCTTGCCCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGRPGE*NPCPEA
Trigger: AGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGACCTGCCAGGTCTTTaGCTGGCTATGGTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGDLPGL*LAMVSG
Trigger: GCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGTC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCCCCGCCTTGGAGGGGTaGAGTGCTGTGATGATCCAC +
Preference number: 5 (lower is better)
Translates to: CSCCYNLQGSQGRGPWISPALEG*SAVMIH
Trigger: GTGGATCATCACAGCACTCAACCCCTCCAAGGCGGG...GCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS TCA 90 bp GGAAGAAGCCAAGGTTGCAGCTGTAGCGGACCTTGTCACCGAGGTTaGAGGTTGAACCCTGCTGGATGCCATTGGGCAGCCTCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: GRSQGCSCSGPCHRG*RLNPAGCHWAASLG
Trigger: ACCCAGGGAGGCTGCCCAATGGCATCCAGCAGGGTTCAACCTTCAACCTCGGTGACAAGGTCCGCTACAGCTGCAACCTTGGCTTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp GAACTGGGGAACCTGGGTCCCGTGGTAAACCCCGATCAAGGGCGCTaGGTAAGTCCGCCCATCGCGTACTTCCAGGGTGTCATAGTTGAC +
Preference number: 5 (lower is better)
Translates to: ELGNLGPVVNPDQGR*VSPPIAYFQGVIVD
Trigger: GTCAACTATGACACCCTGGAAGTACGCGATGGGCGGACTTACTCAGCGCCCTTGATCGGGGTTTACCACGGGACCCAGGTTCCCCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp AGAACCCCGCTCTCCACAGGCCCATCCCAGATGCGCAGCACGTCGTaGACCTCCTCTGTGTCAAACACCAGGAAGTGTAGCCCAATGGTG +
Preference number: 5 (lower is better)
Translates to: RTPLSTGPSQMRSTS*TSSVSNTRKCSPMV
Trigger: CACCATTGGGCTACACTTCCTGGTGTTTGACACAGAGGAGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTGTGGAGAGCGGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp TCTCGTGGGACGTGGAGAGGAGGGAGCTTGGAAGCTCGCTTCCACTaGATCTTCCCATCATGCGGCTGGTCTCATAGGGGCCATTCCGGA +
Preference number: 5 (lower is better)
Translates to: SRGTWRGGSLEARFH*IFPSCGWSHRGHSG
Trigger: TCCGGAATGGCCCCTATGAGACCAGCCGCATGATGGGAAGATTCAGTGGAAGCGAGCTTCCAAGCTCCCTCCTCTCCACGTCCCACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp GGTAGAAGCCGTGGTTGCACCGGTAAGACACAGTGGTGCCGAAGCTaGACCTGTGCGGGCCGCTGGCGTGGACCTGACGAACACTATTTT +
Preference number: 5 (lower is better)
Translates to: GRSRGCTGKTQWCRS*TCAGRWRGPDEHYF
Trigger: AAAATAGTGTTCGTCAGGTCCACGCCAGCGGCCCGCACAGGTTCAGCTTCGGCACCACTGTGTCTTACCGGTGCAACCACGGCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS GCA 90 bp CACCGTGGTGAAACCGGGAGCCTTCCCTCCGGCCATATGCAGGTATaGCAGGGTCACCGCAACTGCCCTGCTCGATCTCTTCATAAGAAG +
Preference number: 5 (lower is better)
Translates to: HRGETGSLPSGHMQV*QGHRNCPARSLHKK
Trigger: CTTCTTATGAAGAGATCGAGCAGGGCAGTTGCGGTGACCCTGGCATACCTGCATATGGCCGGAGGGAAGGCTCCCGGTTTCACCACGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000338325.1
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp TGCTCACAGATGCATCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTaGTGCTTTCAATGCGGCCTGGGAGCTGGGAGCCATAGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: CSQMHRCGRRGRGCC*CFQCGLGAGSHRSF
Trigger: GAAGCTTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp CATTGCTCACAGATGCATCGCTGCGGAAGGCGAGGAAGAGGCTGTTaGTGCTGCTTTCAATGCGGCCTGGGAGCTGGGAGCCATAGAAGC +
Preference number: 5 (lower is better)
Translates to: HCSQMHRCGRRGRGC*CCFQCGLGAGSHRS
Trigger: GCTTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGAGCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp GCCCACACATGCGGGTGCTGTTTCCCACCAGAGTACGCTTGCCGATaGAGCTGTACCGCACCACTGCTCCCACAGTATAACTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: AHTCGCCFPPEYACR*SCTAPLLPQYNCLQ
Trigger: CTGGAGACAGTTATACTGTGGGAGCAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGGGAAACAGCACCCGCATGTGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GATGAGGCGCAGAGAGAGGGTGGTGGCTGCACTAACAATGGTGGCTaGCAGCTGAAAGCCTGTGAGCCTCGTACGCAGATTCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: DEAQREGGGCTNNGG*QLKACEPRTQILWL
Trigger: CAGCCAGAGAATCTGCGTACGAGGCTCACAGGCTTTCAGCTGCCAGCCACCATTGTTAGTGCAGCCACCACCCTCTCTCTGCGCCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GGAGCTGCCCAGCTGGAGGCTGTCCCCAAACCGTTTGCCATTTACTaGAACGCCAGGATCCGGGCACTCGTTGTGTCGGAAGGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: GAAQLEAVPKPFAIY*NARIRALVVSEGGK
Trigger: TTTACCACCTTCCGACACAACGAGTGCCCGGATCCTGGCGTTCCAGTAAATGGCAAACGGTTTGGGGACAGCCTCCAGCTGGGCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GCGGAAGGCGAGGAAGAGGCTGTTGCTGCTGCTTTCAATGCGGCCTaGGAGCTGGGAGCCATAGAAGCTTCCTATGAGAGGGCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: AEGEEEAVAAAFNAA*ELGAIEASYERAER
Trigger: TCTCTCAGCCCTCTCATAGGAAGCTTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GGCCGATTCTGGGAGTGGTCGCTGTGGAAATACACGGTGGTCTCGTaGGACGTGGAGAGGAGGGAGCTTGGAAGCTCGCTTCCACTGAAT +
Preference number: 5 (lower is better)
Translates to: GRFWEWSLWKYTVVS*DVERRELGSSLPLN
Trigger: ATTCAGTGGAAGCGAGCTTCCAAGCTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTATTTCCACAGCGACCACTCCCAGAATCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCTCTCAACTGTCCCATaGGGACCGTGCAGTTGGAAC +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELSTVP*GPCSWN
Trigger: GTTCCAACTGCACGGTCCCAATGGGACAGTTGAGAG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAGTCGCAGCCAGTTCTaGCTGCTGATAACGGGGGCT +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSRSQF*LLITGA
Trigger: AGCCCCCGTTATCAGCAGCAAGAACTGGCTGCGACT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCGCGCTGCCGGTGGTaGCCATCCGATGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPRCRW*PSDVKC
Trigger: GCACTTCACATCGGATGGCAACCACCGGCAGCGCGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCATCACCTTGGAGGGGTaGAGTGCTGTGATGATCCAC +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPITLEG*SAVMIH
Trigger: GTGGATCATCACAGCACTCAACCCCTCCAAGGTGAT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGCGAGCTTGATCACCTaGGAGGGGTTGAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGASLIT*EGLSAV
Trigger: CACAGCACTCAACCCCTCCAAGGTGATCAAGCTCGC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGGGTTCGAGGAACCGCTaGGTAGACAAAGTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEGSRNR*VDKVEA
Trigger: GGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACC...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCACGGGAGGAGTTGAGTaGGTTCTTTCCAACTCCGAG +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPTGGVE*VLSNSE
Trigger: CTCGGAGTTGGAAAGAACCAACTCAACTCCTCCCGT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCCCCTCACAATGCCATaGGCAAAGGGCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGPLTMP*AKGSGS
Trigger: AGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAGGGTGGCCAGTCAATaGATACCCCGGGAGGCACTC +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGRVASQ*IPREAL
Trigger: GAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGAGTACACAGTGCCGTaGGAAGAAGTGATGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPEYTVP*EEVMFP
Trigger: CGGGAACATCACTTCTTCCAACGGCACTGTGTACTC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGAGTACACAGTGCCGTaGGAAGAAGTGATGTTCCCG +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEEYTVP*EEVMFP
Trigger: CGGGAACATCACTTCTTCCAACGGCACTGTGTACTC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCCTCTGCACTGTTTTCTaGGCCATGCTCCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCLCTVF*AMLRVK
Trigger: CTTCACCCGGAGCATGGCCAAGAAAACAGTGCAGAG...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCGCAGGTACACAGAGTaGCTTGAGCTGGTGACAATC +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPRRYTE*LELVTI
Trigger: GATTGTCACCAGCTCAAGCAACTCTGTGTACCTGCG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAACACCATTCCATTCTaGGGGGCCTCAGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCNTIPF*GASGSP
Trigger: TGGGCTTCCTGAGGCCCCCAAGAATGGAATGGTGTT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGAACACCATTCCATTCTaGGGGGCCTCAGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAENTIPF*GASGSP
Trigger: TGGGCTTCCTGAGGCCCCCAAGAATGGAATGGTGTT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGTGGGACATTGCGGTaGCTCCATAGGCCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGGTLR*LHRPVS
Trigger: GGACACAGGCCTATGGAGCAACCGCAATGTCCCACC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTTCCATGTCCGGTCCTaGGTGCAGCTCAGCACAGAT +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGFHVRS*VQLSTD
Trigger: ATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTTCCAGGGCCCCGACGTaGGCATGCGTTGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLASRAPT*ACVGVS
Trigger: AGAGACGCCAACGCATGCCAACGTCGGGGCCCTGGA...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTGCTCGGAGCCACCCTaGAGGGAGAAGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRCSEPP*REKPSW
Trigger: CCAGGAGGGCTTCTCCCTCAAGGGTGGCTCCGAGCA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACTTGCTGTTGGCAACTaGGAAGCCAGTCACTCTGAG +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPELAVGN*EASHSE
Trigger: CTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGCATTGACCTTGCTGTaGGCAACTTGGAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEALTLL*ATWKPV
Trigger: GACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGAACTGCCCAAAGCCTaGGCCCTTGACAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGELPKA*ALDRAL
Trigger: CAAGGCTCTGTCAAGGGCCAAGGCTTTGGGCAGTTC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATGGGGAGTTGAATCCTaGCCCCGAAGCTGCCTACGC +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGWGVES*PRSCLR
Trigger: GCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGTGGGGAGTTGAATCCTaGCCCCGAAGCTGCCTACGC +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEWGVES*PRSCLR
Trigger: GCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCA...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAAGGGAGCATAAGAAATaGGGAGGGGAGCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEREHKK*GGELPA
Trigger: TGCAGGAAGCTCCCCTCCCAATTTCTTATGCTCCCT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTAGGAAACGGGCCCCTGCCTCTCAGTGAAGACCCTGGCGTGGCCTCCTCCCTGAAATGTCAGGAGCACTaGTTCTCAGTGCTACAGTCG +
Preference number: 5 (lower is better)
Translates to: LGNGPLPLSEDPGVASSLKCQEH*FSVLQS
Trigger: CGACTGTAGCACTGAGAACAAGTGCTCCTGACATTT...CAGGGAGGAGGCCACGCCAGGGTCTTCACTGAGAGGCAGGGGCCCGTTTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAGGCCGTTGACAGGGTaGCCTGGGTGTCCACAGGTA +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKERPLTG*PGCPQV
Trigger: TACCTGTGGACACCCAGGCAACCCTGTCAACGGCCT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS TCA 90 bp ACTCCAGAGGCTCCCCGTCACTTAATGTGTAGCCCGAGTCACAGCTaGAGGTCACCAGCGCGCCCACGTAGAAGTCATTCCCATGACGCT +
Preference number: 5 (lower is better)
Translates to: TPEAPRHLMCSPSHS*RSPARPRRSHSHDA
Trigger: AGCGTCATGGGAATGACTTCTACGTGGGCGCGCTGGTGACCTTCAGCTGTGACTCGGGCTACACATTAAGTGACGGGGAGCCTCTGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp AGGGTGGCCAGTCAATTGATACCCCGGGAGGCACTCGAAGGTCACTaGTTGTCCCACGTTGTAGCCAGCTCCCCTCACAATGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: RVASQLIPREALEGH*LSHVVASSPHNAIG
Trigger: GCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTGGGACAATCAGTGACCTTCGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp ACTGACTGCATAGTCGCTGATGAGGCGCAGAGAGAGGGTGGTGGCTaGACTAACAATGGTGGCTGGCAGCTGAAAGCCTGTGAGCCTCGT +
Preference number: 5 (lower is better)
Translates to: TDCIVADEAQREGGG*TNNGGWQLKACEPR
Trigger: ACGAGGCTCACAGGCTTTCAGCTGCCAGCCACCATTGTTAGTGCAGCCACCACCCTCTCTCTGCGCCTCATCAGCGACTATGCAGTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp TCACAGATGCATCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTGCTaGTTTCAATGCGGCCTGGGAGCTGGGAGCCATAGAAGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: SQMHRCGRRGRGCCC*FQCGLGAGSHRSFL
Trigger: TAGGAAGCTTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp CCATGCACTCACGCACCCTGGAGCCCACCAGTGTGTATCCGGAATTaGAGGAGAAGATGGCTGTTGCCCCGTAGACAGACAGTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: PCTHAPWSPPVCIRN*RRRWLLPRRQTVFR
Trigger: TCGGAACACTGTCTGTCTACGGGGCAACAGCCATCTTCTCCTGCAATTCCGGATACACACTGGTGGGCTCCAGGGTGCGTGAGTGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS GCA 90 bp TCTTGCCCGACCAGTGATGATCCTGCTGGCAGATGCGCACAGACATaGCGATCAGGCGGAAGCCAGCATTGCATTGGTACACCACACTGC +
Preference number: 5 (lower is better)
Translates to: SCPTSDDPAGRCAQT*RSGGSQHCIGTPHC
Trigger: GCAGTGTGGTGTACCAATGCAATGCTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGTCGGGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS GCA 90 bp CACAGAAAGGGGTCTTGCCCGACCAGTGATGATCCTGCTGGCAGATaGGCACAGACATGCCGATCAGGCGGAAGCCAGCATTGCATTGGT +
Preference number: 5 (lower is better)
Translates to: HRKGSCPTSDDPAGR*AQTCRSGGSQHCIG
Trigger: ACCAATGCAATGCTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGTCGGGCAAGACCCCTTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS GCA 90 bp GTTTCCCACCAGAGTACGCTTGCCGATGCAGCTGTACCGCACCACTaGTCCCACAGTATAACTGTCTCCAGACATCTGGGAGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: VSHQSTLADAAVPHH*SHSITVSRHLGVRR
Trigger: CCGCCTCACTCCCAGATGTCTGGAGACAGTTATACTGTGGGAGCAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp CATCCAGCCCACACATGCGGGTGCTGTTTCCCACCAGAGTACGCTTaGCGATGCAGCTGTACCGCACCACTGCTCCCACAGTATAACTGT +
Preference number: 5 (lower is better)
Translates to: HPAHTCGCCFPPEYA*RCSCTAPLLPQYNC
Trigger: ACAGTTATACTGTGGGAGCAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGGGAAACAGCACCCGCATGTGTGGGCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp TCTGTACAGTTGATGATTCTGCAGGTGGGCAGCATGTCACTCCATTaGCCGCTGGCCAGGCATTGGGACCTAGCAGCCCCCTCAGCCATA +
Preference number: 5 (lower is better)
Translates to: SVQLMILQVGSMSLH*PLARHWDLAAPSAI
Trigger: TATGGCTGAGGGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCCCACCTGCAGAATCATCAACTGTACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS CCA 90 bp CGGAAGGTGGTAAAAGTGATGTTGAAGCCCCTCTTCCCTGTGGAGTaGTCAGTCTGGAACTCGAGACGGGCCACGTGGCCACTGCTTGTG +
Preference number: 5 (lower is better)
Translates to: RKVVKVMLKPLFPVE*SVWNSRRATWPLLV
Trigger: CACAAGCAGTGGCCACGTGGCCCGTCTCGAGTTCCAGACTGACCACTCCACAGGGAAGAGGGGCTTCAACATCACTTTTACCACCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CCACATCATTCACCAAGTAGCGCTCGCCAGTCTTCACCCCGTTACTaGGCACAGCAGGTTCCGGACAACTGCTCAGGCCCACCGTTTTGT +
Preference number: 5 (lower is better)
Translates to: PHHSPSSARQSSPRY*AQQVPDNCSGPPFC
Trigger: ACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAGACTGGCGAGCGCTACTTGGTGAATGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GTGGAAATACACGGTGGTCTCGTGGGACGTGGAGAGGAGGGAGCTTaGAAGCTCGCTTCCACTGAATCTTCCCATCATGCGGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: VEIHGGLVGRGEEGA*KLASTESSHHAAGL
Trigger: GAGACCAGCCGCATGATGGGAAGATTCAGTGGAAGCGAGCTTCCAAGCTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTATTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CTGCACTGTTTTCTTGGCCATGCTCCGGGTGAAGACGCCGAGCCGTaGTGCTGTTTGCTGTGGCCCATCCCAGATGGTGATGAAATCTCC +
Preference number: 5 (lower is better)
Translates to: LHCFLGHAPGEDAEP*CCLLWPIPDGDEIS
Trigger: GGAGATTTCATCACCATCTGGGATGGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAGAAAACAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGTGGTGGCTTTGAACTaGCCATCTAGGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAVVALN*PSRAGG
Trigger: GCCCCCGGCCCTAGATGGCAAGTTCAAAGCCACCAC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTCTTGGGTGGTGGCTTaGAACTTGCCATCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSWVVA*NLPSRA
Trigger: GGCCCTAGATGGCAAGTTCAAAGCCACCACCCAAGA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGACCTTGTCACCGAGGTaGAAGGTTGAACCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRTLSPR*KVEPCW
Trigger: CCAGCAGGGTTCAACCTTCAACCTCGGTGACAAGGT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAAGTCGCAGCCAGTTCTaGCTGCTGATAACGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGSRSQF*LLITGA
Trigger: AGCCCCCGTTATCAGCAGCAAGAACTGGCTGCGACT...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGACGTCTTCTGGCTGTaGTCTTTGCTGGGCATCAGC +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGDVFWL*SLLGIS
Trigger: GCTGATGCCCAGCAAAGACAACAGCCAGAAGACGTC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTCCGAGCCTAGTCTTTaGCCCCTTTCGGGTATGCCA +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSEPSL*PLSGMP
Trigger: TGGCATACCCGAAAGGGGCAAAAGACTAGGCTCGGA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGACGGGCTGGTGAAGTaGAAGAAGCAGGAGAACACG +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRDGLVK*KKQENT
Trigger: CGTGTTCTCCTGCTTCTTCAACTTCACCAGCCCGTC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAGTGGTAAAAGTGATGTaGAAGCCCCTCTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEVVKVM*KPLFPV
Trigger: CACAGGGAAGAGGGGCTTCAACATCACTTTTACCAC...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCACTCAGCAACACACCTaGGCAGAGGCGAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCTQQHT*AEASST
Trigger: TGTGGAGCTCGCCTCTGCCAAGGTGTGTTGCTGAGT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGCGAGGAAGAGGCTGTaGCTGCTGCTTTCAATGCGG +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCARKRL*LLLSMR
Trigger: CCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACTGCGCTCTGTGAGGTaGCCTCCACACGGCACCACA +
Preference number: 5 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPLRSVR*PPHGTT
Trigger: TGTGGTGCCGTGTGGAGGCAACCTCACAGAGCGCAG...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCTGCGCTCTGTGAGGTaGCCTCCACACGGCACCACA +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLALRSVR*PPHGTT
Trigger: TGTGGTGCCGTGTGGAGGCAACCTCACAGAGCGCAG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAAGGGCAGGCACGGTaGTTCCTGAGAAACTCCCCA +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGEGQAR*FLRNSP
Trigger: TGGGGAGTTTCTCAGGAACAACCGTGCCTGCCCTTC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCTCAGGCCCACCGTTTaGTACTCCAAGTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGLRPTV*YSKWKP
Trigger: TGGCTTCCACTTGGAGTACAAAACGGTGGGCCTGAG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTTGAGCAGGACCTGGTaGGATGAACTCTGCACTGTT +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPLSRTW*DELCTV
Trigger: AACAGTGCAGAGTTCATCCAACCAGGTCCTGCTCAA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGTGACGACTTCGGCGTaGGGGAGGATGGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRVTTSA*GRMVGG
Trigger: TCCTCCCACCATCCTCCCCAACGCCGAAGTCGTCAC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GGGGTGCCGTGTCCCAGAGGTGGTGTGGCCAGGGGTAGGCTCCTGCCTCTGTCACTCAAACTCATCATATaGCTTCTCGCTGAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: GVPCPRGGVARGRLLPLSLKLII*LLAEEV
Trigger: TACTTCCTCAGCGAGAAGCAATATGATGAGTTTGAG...TGACAGAGGCAGGAGCCTACCCCTGGCCACACCACCTCTGGGACACGGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCAGCTGTACATGGCCTaGGTTCCCACTGTGTACTCC +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRQLYMA*VPTVYS
Trigger: GGAGTACACAGTGGGAACCAAGGCCATGTACAGCTG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCCATTGATGTGTCCGTaGACAATGGGCTCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGPLMCP*TMGSGV
Trigger: GACTCCTGAGCCCATTGTCAACGGACACATCAATGG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGGCGGAAGCCAGCATaGCATTGGTACACCACACTG +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRRRKPA*HWYTTL
Trigger: CAGTGTGGTGTACCAATGCAATGCTGGCTTCCGCCT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCCACCAGAGTACGCTaGCCGATGCAGCTGTACCGC +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPTRVR*PMQLYR
Trigger: GCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTTGTACCTGAAGTCATaGCCCAGCCGAAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAELYLKS*PSRRPL
Trigger: CAATGGCCTTCGGCTGGGCAATGACTTCAGGTACAA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGCTTTGCAGACGGGCTaGGTTCCATTCCATGTCCGG +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEALQTG*VPFHVR
Trigger: CCGGACATGGAATGGAACCAAGCCCGTCTGCAAAGC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGGCTCCCGGGCAGTGTaGATGGGTCTCCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSGSRAV*MGLPLG
Trigger: GCCCAGTGGGAGACCCATCAACACTGCCCGGGAGCC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAAATGGTGGCATTGACCTaGCTGTTGGCAACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEMVALT*LLATWK
Trigger: CTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCAT...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTCGATCATGGTGGCATaGACCTTGCTGTTGGCAACT +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSIMVA*TLLLAT
Trigger: AGTTGCCAACAGCAAGGTCAATGCCACCATGATCGA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCCTTGACAGAGCCTaGGTAGATGAAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGALDRA*VDEGGS
Trigger: GGAGCCACCTTCATCTACCAAGGCTCTGTCAAGGGC...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAATGTGGCCCGAACATaGGTGTTCTCGTGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRNVART*VFSWPA
Trigger: TGCTGGCCACGAGAACACCAATGTTCGGGCCACATT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTGTTGCGGTCGTACATaGGGTTCTCAAATGTGGCCC +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCCCGRT*GSQMWP
Trigger: GGGCCACATTTGAGAACCCAATGTACGACCGCAACA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCAGCCAGACTTGACCTaGGGCTCCTGGCCAGACTCC +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRQPDLT*GSWPDS
Trigger: GGAGTCTGGCCAGGAGCCCAAGGTCAAGTCTGGCTG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCAGCCACTCTGTTGTTTaGATTCAGGACCTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPSHSVV*IQDLPG
Trigger: ACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCT...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGTGAGTGTGTCTGGATaGGCCCTCTCCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAVSVSG*ALSLQA
Trigger: GGCCTGGAGGGAGAGGGCCAATCCAGACACACTCAC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGGAGCTTCCTGCACTaGTTTCCAGCCAAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGSFLH*FPAKER
Trigger: TCTTTCCTTGGCTGGAAACAAGTGCAGGAAGCTCCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGGGGAGCTTCCTGCACTaGTTTCCAGCCAAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGGSFLH*FPAKER
Trigger: TCTTTCCTTGGCTGGAAACAAGTGCAGGAAGCTCCC...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp CCTCTGGCTGGTGCGAGGCCTTTGGCGCTGAACTTAATGAGAACTTaGTTGGAGGTGGCCAAGGGCAGTGATTCTCCTGTATGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PLAGARPLALNLMRT*LEVAKGSDSPVWEP
Trigger: GGGCTCCCATACAGGAGAATCACTGCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGCCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp CACTGTTTTCTTGGCCATGCTCCGGGTGAAGACGCCGAGCCGTGGTaGTGTTTGCTGTGGCCCATCCCAGATGGTGATGAAATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HCFLGHAPGEDAEPW*CLLWPIPDGDEISR
Trigger: TCTGGAGATTTCATCACCATCTGGGATGGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAGAAAACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS CCA 90 bp CAGCTGAAAGCCTGTGAGCCTCGTACGCAGATTCTCTGGCTGGGGTaGACCATCAAACACCGACAGGACATCAAAGTCCTCTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QLKACEPRTQILWLG*TIKHRQDIKVLFQG
Trigger: GCCCTGGAAGAGGACTTTGATGTCCTGTCGGTGTTTGATGGTCCACCCCAGCCAGAGAATCTGCGTACGAGGCTCACAGGCTTTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CTCGCTGGCCATGATGTCTGTGGGCTGGATGTTGCGGTCGTACATTaGGTTCTCAAATGTGGCCCGAACATTGGTGTTCTCGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LAGHDVCGLDVAVVH*VLKCGPNIGVLVAS
Trigger: GCTGGCCACGAGAACACCAATGTTCGGGCCACATTTGAGAACCCAATGTACGACCGCAACATCCAGCCCACAGACATCATGGCCAGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GTGCTGACTGTGAACTCCGCCTCGCTGGCCATGATGTCTGTGGGCTaGATGTTGCGGTCGTACATTGGGTTCTCAAATGTGGCCCGAACA +
Preference number: 5 (lower is better)
Translates to: VLTVNSASLAMMSVG*MLRSYIGFSNVART
Trigger: TGTTCGGGCCACATTTGAGAACCCAATGTACGACCGCAACATCCAGCCCACAGACATCATGGCCAGCGAGGCGGAGTTCACAGTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGGTGGCGTGGAAGCCTaGGGCACTGACTGCATAGTC +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAGGVEA*GTDCIV
Trigger: GACTATGCAGTCAGTGCCCAAGGCTTCCACGCCACC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACCGCGCTGCCGGTGGTaGCCATCCGATGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTPRCRW*PSDVKC
Trigger: GCACTTCACATCGGATGGCAACCACCGGCAGCGCGG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCTTCTTGACTTGGTATaGGGCACTGAATCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRLLDLV*GTESAL
Trigger: CAGCGCGGATTCAGTGCCCAATACCAAGTCAAGAAG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGTTCTGGCTGTTGTCTTaGCTGGGCATCAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGFWLLS*LGISFT
Trigger: TGTGAAGCTGATGCCCAGCAAAGACAACAGCCAGAA...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGATCACCTTGGAGGGGTaGAGTGCTGTGATGATCCAC +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRITLEG*SAVMIH
Trigger: GTGGATCATCACAGCACTCAACCCCTCCAAGGTGAT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTCCTCAAAGGCGAGCTaGATCACCTTGGAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCSSKAS*ITLEGL
Trigger: CAACCCCTCCAAGGTGATCAAGCTCGCCTTTGAGGA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGACGGGCTGGTGAAGTaGAAGAAGCAGGAGAACACG +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEDGLVK*KKQENT
Trigger: CGTGTTCTCCTGCTTCTTCAACTTCACCAGCCCGTC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGATGACGAAGCCAGCATaGCTCACAGATGCATCGCTG +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRMTKPA*LTDASL
Trigger: CAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCAT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGCTGGTGCGAGGCCTTaGGCGCTGAACTTAATGAGA +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCAGARP*ALNLMR
Trigger: TCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCACAAAACTGACAACTaGGATCTGGATGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGHKTDN*DLDASA
Trigger: GGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGTG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACTCAGGCCCACCGTTTaGTACTCCAAGTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLRPTV*YSKWKP
Trigger: TGGCTTCCACTTGGAGTACAAAACGGTGGGCCTGAG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGCCCCTCACAATGCCATaGGCAAAGGGCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: ISGATGVPNERGMGTEQMPLTMP*AKGSGS
Trigger: AGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGG...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCCCGGTTGGTGCCATGTaGACACGTGAGGACAGGGTG +
Preference number: 5 (lower is better)
Translates to: AARLHKGRGRGTEGPSETPVGAM*TREDRV
Trigger: CACCCTGTCCTCACGTGTCAACATGGCACCAACCGG...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGGAGTACACAGTGCCGTaGGAAGAAGTGATGTTCCCG +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGEYTVP*EEVMFP
Trigger: CGGGAACATCACTTCTTCCAACGGCACTGTGTACTC...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATACTGCAGCAGATACTGCGGAGGCTGGGTTCTGTTTCCAGTTCTATCCACATGTGCAGCAGGCTGAGGTaGAGGCGGACGCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: ILQQILRRLGSVSSSIHMCSRLR*RRTPWP
Trigger: TGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCA...CATGTGGATAGAACTGGAAACAGAACCCAGCCTCCGCAGTATCTGCTGCAGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGCAGCAGGCTGAGGTaGAGGCGGACGCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLCSRLR*RRTPWP
Trigger: TGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCA...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTCTGCACTGTTTTCTaGGCCATGCTCCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELCTVF*AMLRVK
Trigger: CTTCACCCGGAGCATGGCCAAGAAAACAGTGCAGAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACTGTCAGAAGCTCATTaGTTGGACAGTGCACTTCAC +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPELSEAH*LDSALH
Trigger: GTGAAGTGCACTGTCCAACAAATGAGCTTCTGACAG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAGGAGAAGATGGCTGTaGCCCCGTAGACAGACAGTG +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKERRRWL*PRRQTV
Trigger: CACTGTCTGTCTACGGGGCAACAGCCATCTTCTCCT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCGACGTTGGCATGCGTaGGCGTCTCTGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLRRWHA*ASLAAC
Trigger: GCAGGCAGCCAGAGACGCCAACGCATGCCAACGTCG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCAGCTGCCATCCGCCTaGCAGGTGCGGTGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMQLPSA*QVRCSE
Trigger: CTCCGAGCACCGCACCTGCAAGGCGGATGGCAGCTG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTTCCACAGGGAATTCTaGGCAAAAACATCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPFHREF*AKTSPG
Trigger: TCCTGGGGATGTTTTTGCCAAGAATTCCCTGTGGAA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGCCTGAGGTCCAGTCTTaGAAAGCCGAACTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRPEVQS*KAELPK
Trigger: TTTGGGCAGTTCGGCTTTCAAAGACTGGACCTCAGG...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAACCATTGAAAGGAACTTaGGGTCTTCTCCTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEPLKGT*GLLLCL
Trigger: CAAGCACAGGAGAAGACCCAAAGTTCCTTTCAATGG...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTGTTGCGGTCGTACATaGGGTTCTCAAATGTGGCCC +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRCCGRT*GSQMWP
Trigger: GGGCCACATTTGAGAACCCAATGTACGACCGCAACA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAGCCACTCTGTTGTTTaGATTCAGGACCTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSHSVV*IQDLPG
Trigger: ACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAGGGAGCATAAGAAATaGGGAGGGGAGCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGREHKK*GGELPA
Trigger: TGCAGGAAGCTCCCCTCCCAATTTCTTATGCTCCCT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCCTTCCACCCTGCTGGATTAGATGGTGTCAGGGGTGGCAATGACGGTGAGCAGACCCTCCTTGTTGCATaGTATGTTCCCTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PFHPAGLDGVRGGNDGEQTLLVA*YVPWVS
Trigger: GGAGACCCAGGGAACATACAATGCAACAAGGAGGGT...CTGCTCACCGTCATTGCCACCCCTGACACCATCTAATCCAGCAGGGTGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGGGTCTGGGCACTCTaGAAGTTCATAGGCCTGATA +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEWVWAL*KFIGLI
Trigger: TATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCGCCATATACCCAGGGTaGCAAACAAACTTGACCACA +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPAIYPG*QTNLTT
Trigger: TGTGGTCAAGTTTGTTTGCAACCCTGGGTATATGGC...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS TCA 90 bp AGTTGGAACGTGCAGTTCTGGCCAGCTGATCTTGGGTGGTGGCTTTaGACTTGCCATCTAGGGCCGGGGGCGATGCTTATGAGCCTCATT +
Preference number: 5 (lower is better)
Translates to: SWNVQFWPADLGWWL*TCHLGPGAMLMSLI
Trigger: AATGAGGCTCATAAGCATCGCCCCCGGCCCTAGATGGCAAGTTCAAAGCCACCACCCAAGATCAGCTGGCCAGAACTGCACGTTCCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp ACAGTGGTGCCGAAGCTGAACCTGTGCGGGCCGCTGGCGTGGACCTaGCGAACACTATTTTCTTGGTGTCCAGGATCTGTACAGTTGATG +
Preference number: 5 (lower is better)
Translates to: TVVPKLNLCGPLAWT*RTLFSWCPGSVQLM
Trigger: CATCAACTGTACAGATCCTGGACACCAAGAAAATAGTGTTCGTCAGGTCCACGCCAGCGGCCCGCACAGGTTCAGCTTCGGCACCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS GCA 90 bp CCTGAGTCCCAAGGAAGCCTTCATCACAGAGGAAGGAGATGGAGCTaGCCAGCTGGAGGCTGTCCCCAAACCGTTTGCCATTTACTGGAA +
Preference number: 5 (lower is better)
Translates to: PESQGSLHHRGRRWS*PAGGCPQTVCHLLE
Trigger: TTCCAGTAAATGGCAAACGGTTTGGGGACAGCCTCCAGCTGGGCAGCTCCATCTCCTTCCTCTGTGATGAAGGCTTCCTTGGGACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp CTTCACTGCAGCTGTACATGGCCTTGGTTCCCACTGTGTACTCCTTaGCAAACACCATTCCATTCTTGGGGGCCTCAGGAAGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: LHCSCTWPWFPLCTP*QTPFHSWGPQEAHR
Trigger: CCTGTGGGCTTCCTGAGGCCCCCAAGAATGGAATGGTGTTTGGCAAGGAGTACACAGTGGGAACCAAGGCCATGTACAGCTGCAGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CGCCTGCCTGGAGGTGGTAGCCTTCACTGCAGCTGTACATGGCCTTaGTTCCCACTGTGTACTCCTTGCCAAACACCATTCCATTCTTGG +
Preference number: 5 (lower is better)
Translates to: RLPGGGSLHCSCTWP*FPLCTPCQTPFHSW
Trigger: CCAAGAATGGAATGGTGTTTGGCAAGGAGTACACAGTGGGAACCAAGGCCATGTACAGCTGCAGTGAAGGCTACCACCTCCAGGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GCTTCCAACCTGGTAGCCCTGAGAATTGTTCTGTATCCCAAACTGTaGCACACCAGGGTCCGCACACGTGGTCAGGGTCGGATCTATGCA +
Preference number: 5 (lower is better)
Translates to: ASNLVALRIVLYPKL*HTRVRTRGQGRIYA
Trigger: TGCATAGATCCGACCCTGACCACGTGTGCGGACCCTGGTGTGCCACAGTTTGGGATACAGAACAATTCTCAGGGCTACCAGGTTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GACCTTGCTGTTGGCAACTTGGAAGCCAGTCACTCTGAGCATGGCTaGCTGCTTCTTCCCCTGGTATTCATAGGCCCCTTTCCACAGGGA +
Preference number: 5 (lower is better)
Translates to: DLAVGNLEASHSEHG*LLLPLVFIGPFPQG
Trigger: TCCCTGTGGAAAGGGGCCTATGAATACCAGGGGAAGAAGCAGCCAGCCATGCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCATTGGGACCGTGCAGTaGGAACGTGCAGTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRIGTVQ*ERAVLA
Trigger: GGCCAGAACTGCACGTTCCAACTGCACGGTCCCAAT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGATCCGCTTGGACCCTaGCAGGTCATAGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRDPLGP*QVIALV
Trigger: AACGAGGGCTATGACCTGCAAGGGTCCAAGCGGATC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGCGAGCTTGATCACCTaGGAGGGGTTGAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAASLIT*EGLSAV
Trigger: CACAGCACTCAACCCCTCCAAGGTGATCAAGCTCGC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACTGTCCCCAAACCGTTaGCCATTTACTGGAACGCCA +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLSPNR*PFTGTP
Trigger: TGGCGTTCCAGTAAATGGCAAACGGTTTGGGGACAG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCATGACGAAGCCAGCATaGCTCACAGATGCATCGCTG +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCMTKPA*LTDASL
Trigger: CAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCAT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGACCCGTGTGCCGTTCTaGATGGAACCAGGATCAAAA +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGTRVPF*MEPGSK
Trigger: TTTTGATCCTGGTTCCATCAAGAACGGCACACGGGT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGACCCGTGTGCCGTTCTaGATGGAACCAGGATCAAAA +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRTRVPF*MEPGSK
Trigger: TTTTGATCCTGGTTCCATCAAGAACGGCACACGGGT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCAGACTGGCCGGGGATaGTTCCACACGGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLQTGRG*FHTGFP
Trigger: TGGGAAGCCCGTGTGGAACAATCCCCGGCCAGTCTG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCTGCGCTCTGTGAGGTaGCCTCCACACGGCACCACA +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLRSVR*PPHGTT
Trigger: TGTGGTGCCGTGTGGAGGCAACCTCACAGAGCGCAG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCATCTTCCACACACAGTaGAGGCTGTTGAGGTACGGC +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCIFHTQ*RLLRYG
Trigger: GCCGTACCTCAACAGCCTCAACTGTGTGTGGAAGAT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACACAAAACTGACAACTaGGATCTGGATGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGHKTDN*DLDASA
Trigger: GGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGTG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGAAGGGCAGGCACGGTaGTTCCTGAGAAACTCCCCA +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAEGQAR*FLRNSP
Trigger: TGGGGAGTTTCTCAGGAACAACCGTGCCTGCCCTTC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTAGTGGAGCGACAGGTGTGCCCAATGAGAGGGGCATGGGAACTGAGCAGATGCTCAGGCCCACCGTTTaGTACTCCAAGTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: ISGATGVPNERGMGTEQMLRPTV*YSKWKP
Trigger: TGGCTTCCACTTGGAGTACAAAACGGTGGGCCTGAG...CATCTGCTCAGTTCCCATGCCCCTCTCATTGGGCACACCTGTCGCTCCACTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGTCTGGGCACTCTaGAAGTTCATAGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGWVWAL*KFIGFT
Trigger: TGTGAAGCCTATGAACTTCAAGAGTGCCCAGACCCA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTTGAGCAGGACCTGGTaGGATGAACTCTGCACTGTT +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGLSRTW*DELCTV
Trigger: AACAGTGCAGAGTTCATCCAACCAGGTCCTGCTCAA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCCCACTGTGTACTCCTaGCCAAACACCATTCCATTC +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGPTVYS*PNTIPF
Trigger: GAATGGAATGGTGTTTGGCAAGGAGTACACAGTGGG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCACTGTGGTGGGACATaGCGGTTGCTCCATAGGCCT +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRHCGGT*RLLHRP
Trigger: AGGCCTATGGAGCAACCGCAATGTCCCACCACAGTG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCACTGTGGTGGGACATaGCGGTTGCTCCATAGGCCT +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAHCGGT*RLLHRP
Trigger: AGGCCTATGGAGCAACCGCAATGTCCCACCACAGTG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACAGCGGATGACCCTTaGGCCAGTATAGTAGTAGCC +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKETADDP*ASIVVA
Trigger: GGCTACTACTATACTGGCCAAAGGGTCATCCGCTGT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACCATTGATGTGTCCGTaGACAATGGGCTCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGPLMCP*TMGSGV
Trigger: GACTCCTGAGCCCATTGTCAACGGACACATCAATGG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGAAGCCAGCATTGCATaGGTACACCACACTGCCCCG +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMREASIA*VHHTAP
Trigger: CGGGGCAGTGTGGTGTACCAATGCAATGCTGGCTTC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCAAGCAGGTAGCCTTTTaGACAACGGAAGAGGACTGT +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCKQVAF*TTEEDC
Trigger: ACAGTCCTCTTCCGTTGTCAAAAAGGCTACCTGCTT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCTTGCTGTTGGCAACTaGGAAGCCAGTCACTCTGAG +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKELAVGN*EASHSE
Trigger: CTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTCGATCATGGTGGCATaGACCTTGCTGTTGGCAACT +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSIMVA*TLLLAT
Trigger: AGTTGCCAACAGCAAGGTCAATGCCACCATGATCGA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCCTGAGGTCCAGTCTTaGAAAGCCGAACTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCPEVQS*KAELPK
Trigger: TTTGGGCAGTTCGGCTTTCAAAGACTGGACCTCAGG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGATGTTGCGGTCGTACATaGGGTTCTCAAATGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGCCGRT*GSQMWP
Trigger: GGGCCACATTTGAGAACCCAATGTACGACCGCAACA...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGCCAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCTGCGCACTTCTAGTTTaGAAGCCTTTATGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: SQGASTNRGRPGELNPCPCALLV*KPLWSL
Trigger: AAGAGACCATAAAGGCTTCAAAACTAGAAGTGCGCA...GGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCTGCTGCCCCCAGACTaGGCATCCTGTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMLLPPD*ASCLGH
Trigger: GTGGCCCAGACAGGATGCCAAGTCTGGGGGCAGCAG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCAGACTGATCTGGGTTaGCATTCTGACTCCACACTT +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGQTDLG*HSDSTL
Trigger: AAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGAGCCACTCTGTTGTTTaGATTCAGGACCTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSHSVV*IQDLPG
Trigger: ACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCT...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTCTGTCAGCCTCCATaGTGTCTGCTGGAAATGGAC +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLCQPP*CLLEMD
Trigger: GTCCATTTCCAGCAGACACAATGGAGGCTGACAGAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCTCTTAGACCCTCCTTGTaGCATTGTATGTTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: AAVVTTCKVPRDGAPGLALRPSL*HCMFPG
Trigger: CCCAGGGAACATACAATGCAACAAGGAGGGTCTAAG...AGCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS TCA 90 bp CAAAGGACTGGAACACAAGCTGGATTCTGTGCTGCTCTTCCGCGGTaGTGGTCCACGTGCAGTTGGCGTAATTGGGGTAGCCATATGGGA +
Preference number: 5 (lower is better)
Translates to: QRTGTQAGFCAALPR*WSTCSWRNWGSHMG
Trigger: TCCCATATGGCTACCCCAATTACGCCAACTGCACGTGGACCATCACCGCGGAAGAGCAGCACAGAATCCAGCTTGTGTTCCAGTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp AGTTCACAGGAAAGTTGGGGGACAGCAAAGTACCCTGAGTGCCTGTaGCTGAATTCCCACACTCAGCAACACACCTTGGCAGAGGCGAGC +
Preference number: 5 (lower is better)
Translates to: SSQESWGTAKYPECL*LNSHTQQHTLAEAS
Trigger: GCTCGCCTCTGCCAAGGTGTGTTGCTGAGTGTGGGAATTCAGTCACAGGCACTCAGGGTACTTTGCTGTCCCCCAACTTTCCTGTGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp CCGCAGGCTGTATCCAGGGTCACAGCTGAAGGACACGGAGCTCCCTaGAAAATGACCTTCATCATGAACCTTGTAGCCAAACTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PQAVSRVTAEGHGAP*KMTFIMNLVAKLGG
Trigger: ACCCCCAAGTTTGGCTACAAGGTTCATGATGAAGGTCATTTTGCAGGGAGCTCCGTGTCCTTCAGCTGTGACCCTGGATACAGCCTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp CGAAGGTCACTGATTGTCCCACGTTGTAGCCAGCTCCCCTCACAATaGCATTGGCAAAGGGCTCTGGGTCTGGGCACTCTTGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: RRSLIVPRCSQLPSQ*HWQRALGLGTLEVH
Trigger: ATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTGGGACAATCAGTGACCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp AGGACATCAAAGTCCTCTTCCAGGGCAAAGGACTGGAACACAAGCTaGATTCTGTGCTGCTCTTCCGCGGTGATGGTCCACGTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RTSKSSSRAKDWNTS*ILCCSSAVMVHVQL
Trigger: CAACTGCACGTGGACCATCACCGCGGAAGAGCAGCACAGAATCCAGCTTGTGTTCCAGTCCTTTGCCCTGGAAGAGGACTTTGATGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp ATTTGCTTCTTGACTTGGTATTGGGCACTGAATCCGCGCTGCCGGTaGTTGCCATCCGATGTGAAGTGCAGTCGCAGCCAGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ICFLTWYWALNPRCR*LPSDVKCSRSQFLL
Trigger: CAGCAAGAACTGGCTGCGACTGCACTTCACATCGGATGGCAACCACCGGCAGCGCGGATTCAGTGCCCAATACCAAGTCAAGAAGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GGCTGGTCTCATAGGGGCCATTCCGGATTTCTATGTAGTCGTGGTTaGGCTCGGTGGAGAAGTTCAGGAACTGGATGTGAGCTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: GWSHRGHSGFLCSRG*ARWRSSGTGCELQS
Trigger: GCTTTGGAGCTCACATCCAGTTCCTGAACTTCTCCACCGAGCCCAACCACGACTACATAGAAATCCGGAATGGCCCCTATGAGACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp CACGTTGTAGCCAGCTCCCCTCACAATGCCATTGGCAAAGGGCTCTaGGTCTGGGCACTCTTGAAGTTCATAGGCTTCACAACCAGGATC +
Preference number: 5 (lower is better)
Translates to: HVVASSPHNAIGKGL*VWALLKFIGFTTRI
Trigger: GATCCTGGTTGTGAAGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS CCA 90 bp GCTGGAGAAAACCAGGCCATCACTGAACACAACTCGGGCATTACTTaGAGTCCCAGGGTTCCCACAAGAGATCACTCCACACTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AGENQAITEHNSGIT*SPRVPTRDHSTLRL
Trigger: CAGCCTGAGTGTGGAGTGATCTCTTGTGGGAACCCTGGGACTCCAAGTAATGCCCGAGTTGTGTTCAGTGATGGCCTGGTTTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GTAGCCAGCTCCCCTCACAATGCCATTGGCAAAGGGCTCTGGGTCTaGGCACTCTTGAAGTTCATAGGCCTGATACTCCAGCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: VASSPHNAIGKGLWV*ALLKFIGLILQLES
Trigger: GGATTCAAGCTGGAGTATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000619121.4
CDS CCA 90 bp CACGTTGTAGCCAGCTCCCCTCACAATGCCATTGGCAAAGGGCTCTaGGTCTGGGCACTCTTGAAGTTCATAGGCCTGATACTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: HVVASSPHNAIGKGL*VWALLKFIGLILQL
Trigger: AAGCTGGAGTATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000619121.4
CDS CCA 90 bp TCACTGATTGTCCCACGTTGTAGCCAGCTCCCCTCACAATGCCATTaGCAAAGGGCTCTGGGTCTGGGCACTCTTGAAGTTCATAGGCCT +
Preference number: 5 (lower is better)
Translates to: SLIVPRCSQLPSQCH*QRALGLGTLEVHRP
Trigger: AGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTGGGACAATCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGTGGCGTGGAAGCCTaGGGCACTGACTGCATAGTC +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGGVEA*GTDCIV
Trigger: GACTATGCAGTCAGTGCCCAAGGCTTCCACGCCACC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGACGTCTTCTGGCTGTaGTCTTTGCTGGGCATCAGC +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRDVFWL*SLLGIS
Trigger: GCTGATGCCCAGCAAAGACAACAGCCAGAAGACGTC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCCCATTGGTTATTCTTTaGGCATGTGATTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPPLVIL*ACDCLL
Trigger: CAGAAGGCAATCACATGCCAAAAGAATAACCAATGG...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGATCCGGGCACTCGTaGTGTCGGAAGGTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGSGHS*CRKVVK
Trigger: TTTTACCACCTTCCGACACAACGAGTGCCCGGATCC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTGCTGGTGCGAGGCCTTaGGCGCTGAACTTAATGAGA +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAAGARP*ALNLMR
Trigger: TCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGC...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCGGTTCGAGGAACCGCTaGGTAGACAAAGTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: AARLHKGRGRGTEGPSETGSRNR*VDKVEA
Trigger: GGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACC...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCAAGGGACTTCACACTaGGGCAGGGGGTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFQGTSH*GRGWSQ
Trigger: CTGGGACCACCCCCTGCCCAAGTGTGAAGTCCCTTG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCCTCTGCACTGTTTTCTaGGCCATGCTCCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: AARLHKGRGRGTEGPSETLCTVF*AMLRVK
Trigger: CTTCACCCGGAGCATGGCCAAGAAAACAGTGCAGAG...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCAGCATCACGGTGGAACTaGAGCAGGACCTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPASRWN*SRTWLD
Trigger: ATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATGC...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGACGACTTCGGCGTaGGGGAGGATGGTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFVTTSA*GRMVGG
Trigger: TCCTCCCACCATCCTCCCCAACGCCGAAGTCGTCAC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGCCCACTGTGTACTCCTaGCCAAACACCATTCCATTC +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEPTVYS*PNTIPF
Trigger: GAATGGAATGGTGTTTGGCAAGGAGTACACAGTGGG...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGAGTGTGTATCCGGAATaGCAGGAGAAGATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSVYPE*QEKMAV
Trigger: AACAGCCATCTTCTCCTGCAATTCCGGATACACACT...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAAGGAGCCAGCACCAACCGTGGGAGGCCTGGGGAGTTGAATCCTTGCCCCGAATATGTCACAGTTTTGTaGTACCTGAAGTCATTGCCC +
Preference number: 5 (lower is better)
Translates to: QGASTNRGRPGELNPCPEYVTVL*YLKSLP
Trigger: GGGCAATGACTTCAGGTACAACAAAACTGTGACATA...TTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTGGGGAGTTGAATCCTTGCCCCGAAGCTGCCTACGCGGAGACAGCAGAACCCTATGTCACAGTTTTGTaGTACCTGAAGTCATTGCCC +
Preference number: 5 (lower is better)
Translates to: PGELNPCPEAAYAETAEPYVTVL*YLKSLP
Trigger: GGGCAATGACTTCAGGTACAACAAAACTGTGACATA...GGGTTCTGCTGTCTCCGCGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTATGAGCGGAGGTGGCTaGCACATGAGAGCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAMSGGG*HMRALQ
Trigger: CTGCAAAGCTCTCATGTGCAAGCCACCTCCGCTCAT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTAATGTGGCCCGAACATaGGTGTTCTCGTGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLANVART*VFSWPA
Trigger: TGCTGGCCACGAGAACACCAATGTTCGGGCCACATT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCAGCCAGACTTGACCTaGGGCTCCTGGCCAGACTCC +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMQPDLT*GSWPDS
Trigger: GGAGTCTGGCCAGGAGCCCAAGGTCAAGTCTGGCTG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTCTTCTCTTTGTCAGTaGACAGCCAGACTTGACCTT +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSSLCQ*TARLDL
Trigger: AAGGTCAAGTCTGGCTGTCAACTGACAAAGAGAAGA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGTCTGGGCCACAGACTaGTCTTCTCTTCTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCVWATD*SSLLFV
Trigger: GACAAAGAGAAGAGAAGACAAGTCTGTGGCCCAGAC...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGTGAGTGTGTCTGGATaGGCCCTCTCCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFVSVSG*ALSLQA
Trigger: GGCCTGGAGGGAGAGGGCCAATCCAGACACACTCAC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTGGTGGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCTGCTGGATTCACACATGCGGGCTTaGCAAAGAGGACCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: AGGVYSLTNLTVPSTLLDSHMRA*QRGPVD
Trigger: GTCCACAGGTCCTCTTTGCAAAGCCCGCATGTGTGA...ATCCAGCAGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp TCCCACATTGCACTCACCCTGGACGATAGCTCCTGGGAATGGCAGTCACAGCTGTGGGTCTGGGCACTCTaGAAGTTCATAGGCCTGATA +
Preference number: 5 (lower is better)
Translates to: SHIALTLDDSSWEWQSQLWVWAL*KFIGLI
Trigger: TATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCA...CAGCTGTGACTGCCATTCCCAGGAGCTATCGTCCAGGGTGAGTGCAATGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAACTTGACCACATCGTaGAGGTTAAACTGGTTACCC +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGNLTTS*RLNWLP
Trigger: GGGTAACCAGTTTAACCTCAACGATGTGGTCAAGTT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCGGGTTGCAAACAAACTaGACCACATCGTTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCGLQTN*TTSLRL
Trigger: TAACCTCAACGATGTGGTCAAGTTTGTTTGCAACCC...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS TCA 90 bp AAGCTGGGGCACAGGTATAGGGATGATCCAGCCAGTGAGTTGATGTaGATGAGTGGACTTGGCACCAAGGTTTGGGCTTCTGTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: KLGHRYRDDPASELM*MSGLGTKVWASVPL
Trigger: GAGAGGCACAGAAGCCCAAACCTTGGTGCCAAGTCCACTCATTCACATCAACTCACTGGCTGGATCATCCCTATACCTGTGCCCCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489419.1
CDS GCA 90 bp AACTGTCACCACTCCGACTCCCATTCTGCGGGATCCCAGGGTCATTaGAGGACGTTGCTGTGGACACTGAAAATTGAATGGCAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: NCHHSDSHSAGSQGH*RTLLWTLKIEWQSP
Trigger: AGGGCTTTGCCATTCAATTTTCAGTGTCCACAGCAACGTCCTGCAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAGTGGTGACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp CGGGTTTTCTGTATAGTCAATGACGAAGCCAGCATTGCTCACAGATaGATCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTGCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: RVFCIVNDEASIAHR*IAAEGEEEAVAAAF
Trigger: GAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCATTGACTATACAGAAAACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp GGTTCGAGGAACCGCTTGGTAGACAAAGTGGAAGCCTCTGGCTGGTaGGAGGCCTTTGGCGCTGAACTTAATGAGAACTTGATTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GSRNRLVDKVEASGW*EAFGAELNENLIGG
Trigger: ACCTCCAATCAAGTTCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp TCAAACACCGACAGGACATCAAAGTCCTCTTCCAGGGCAAAGGACTaGAACACAAGCTGGATTCTGTGCTGCTCTTCCGCGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: SNTDRTSKSSSRAKD*NTSWILCCSSAVMV
Trigger: GACCATCACCGCGGAAGAGCAGCACAGAATCCAGCTTGTGTTCCAGTCCTTTGCCCTGGAAGAGGACTTTGATGTCCTGTCGGTGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GCTGGTTCGAGGAACCGCTTGGTAGACAAAGTGGAAGCCTCTGGCTaGTGCGAGGCCTTTGGCGCTGAACTTAATGAGAACTTGATTGGA +
Preference number: 5 (lower is better)
Translates to: AGSRNRLVDKVEASG*CEAFGAELNENLIG
Trigger: TCCAATCAAGTTCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp GTAGCCAGCTCCCCTCACAATGCCATTGGCAAAGGGCTCTGGGTCTaGGCACTCTTGAAGTTCATAGGCTTCACAACCAGGATCAAGATC +
Preference number: 5 (lower is better)
Translates to: VASSPHNAIGKGLWV*ALLKFIGFTTRIKI
Trigger: GATCTTGATCCTGGTTGTGAAGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS CCA 90 bp TCACTGATTGTCCCACGTTGTAGCCAGCTCCCCTCACAATGCCATTaGCAAAGGGCTCTGGGTCTGGGCACTCTTGAAGTTCATAGGCTT +
Preference number: 5 (lower is better)
Translates to: SLIVPRCSQLPSQCH*QRALGLGTLEVHRL
Trigger: AAGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTGGGACAATCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS CCA 90 bp AGTTTTGTTGTACCTGAAGTCATTGCCCAGCCGAAGGCCATTGGCTaGAATCCCAGGGTCACCACAGTTTATGACGAGGCACTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SFVVPEVIAQPKAIG*NPRVTTVYDEALRV
Trigger: GACCCTGAGTGCCTCGTCATAAACTGTGGTGACCCTGGGATTCCAGCCAATGGCCTTCGGCTGGGCAATGACTTCAGGTACAACAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp TGGGCACTCTTGAAGTTCATAGGCCTGATACTCCAGCTTGAATCCTaGCCGATTCTGGGAGTGGTCGCTGTGGAAATACACGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: WALLKFIGLILQLES*PILGVVAVEIHGGL
Trigger: GAGACCACCGTGTATTTCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGGCCTATGAACTTCAAGAGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAATTGGGACCGTGCAGTaGGAACGTGCAGTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTIGTVQ*ERAVLA
Trigger: GGCCAGAACTGCACGTTCCAACTGCACGGTCCCAAT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGTGGCGTGGAAGCCTaGGGCACTGACTGCATAGTC +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFGGVEA*GTDCIV
Trigger: GACTATGCAGTCAGTGCCCAAGGCTTCCACGCCACC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGAATTTGCTTCTTGACTaGGTATTGGGCACTGAATCC +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGNLLLD*VLGTES
Trigger: GGATTCAGTGCCCAATACCAAGTCAAGAAGCAAATT...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCGAAGAGGAGCCACATTaGATGATTGGTGCTGACAAT +
Preference number: 5 (lower is better)
Translates to: CSCCYNLQGSQGRGPWISEEEPH*MIGADN
Trigger: ATTGTCAGCACCAATCATCAAATGTGGCTCCTCTTC...GCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGGAAGAGGAGCCACATTaGATGATTGGTGCTGACAAT +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWREEEPH*MIGADN
Trigger: ATTGTCAGCACCAATCATCAAATGTGGCTCCTCTTC...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGCCATTGGTTATTCTTTaGGCATGTGATTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAEPLVIL*ACDCLL
Trigger: CAGAAGGCAATCACATGCCAAAAGAATAACCAATGG...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTGGGGGCTTCTTAGCCGACCATaGGTTATTCTTTTGGCATGT +
Preference number: 5 (lower is better)
Translates to: APRASHGTLQGDAGEGWGLLSRP*VILLAC
Trigger: ACATGCCAAAAGAATAACCAATGGTCGGCTAAGAAG...CCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGGTCCCACTGGAGCCTaGAATGAAGCCACCACAGAG +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLGPTGA*NEATTE
Trigger: CTCTGTGGTGGCTTCATTCAAGGCTCCAGTGGGACC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGGGTCATTGCAGGACGTaGCTGTGGACACTGAAAATT +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKEGHCRT*LWTLKI
Trigger: AATTTTCAGTGTCCACAGCAACGTCCTGCAATGACC...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAAGGGAGCGATGCATGTaGGCGGGCTGGGCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKRERCM*AGWAAR
Trigger: TCTGGCAGCCCAGCCCGCCAACATGCATCGCTCCCT...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GCAGCCAGACTTCACAAAGGTAGAGGACGAGGAACTGAAGGGCCATCAGAAACCATGACGAAGCCAGCATaGCTCACAGATGCATCGCTG +
Preference number: 5 (lower is better)
Translates to: AARLHKGRGRGTEGPSETMTKPA*LTDASL
Trigger: CAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCAT...GGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCCCCTCACAATGCCATaGGCAAAGGGCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSPLTMP*AKGSGS
Trigger: AGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAATGCAGCAGGCTGAGGTaGAGGCGGACGCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKCSRLR*RRTPWP
Trigger: TGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCA...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCTCAGAAGCTCATTTGTaGGACAGTGCACTTCACATA +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCSEAHL*DSALHI
Trigger: TATGTGAAGTGCACTGTCCAACAAATGAGCTTCTGA...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCCATTGATGTGTCCGTaGACAATGGGCTCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRPLMCP*TMGSGV
Trigger: GACTCCTGAGCCCATTGTCAACGGACACATCAATGG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGAAGCCAGCATTGCATaGGTACACCACACTGCCCCG +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSEASIA*VHHTAP
Trigger: CGGGGCAGTGTGGTGTACCAATGCAATGCTGGCTTC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCTTGTACCTGAAGTCATaGCCCAGCCGAAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLYLKS*PSRRPL
Trigger: CAATGGCCTTCGGCTGGGCAATGACTTCAGGTACAA...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCCCACCACCTTCCCATaGGGGATGAGCGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPPTTFP*GMSGGG
Trigger: GCCACCTCCGCTCATCCCCAATGGGAAGGTGGTGGG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCTTGCTGTTGGCAACTaGGAAGCCAGTCACTCTGAG +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLALAVGN*EASHSE
Trigger: CTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGTGCGCACTTCTAGTTTaGAAGCCTTTATGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAECALLV*KPLWSL
Trigger: AAGAGACCATAAAGGCTTCAAAACTAGAAGTGCGCA...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGACCTGCCAGGTCTTTaGCTGGCTATGGTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFDLPGL*LAMVSG
Trigger: GCCGCTGACCATAGCCAGCAAAAGACCTGGCAGGTC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTACAGGGGCTTAAGCTaGTGGGGGCCTTCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFYRGLS*WGPSRG
Trigger: TCCTCGGGAAGGCCCCCACAAGCTTAAGCCCCTGTA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCGGGAGCTTCCTGCACTaGTTTCCAGCCAAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRGSFLH*FPAKER
Trigger: TCTTTCCTTGGCTGGAAACAAGTGCAGGAAGCTCCC...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCAGTGCTACAGTCGACATTCCTGCCAGAAATAAGGACCCCACCAGCAACGTTCCCGGAAAGTCAGATTTaGCTGCCCAAAGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SVLQSTFLPEIRTPPATFPESQI*LPKALS
Trigger: GCTGAGGGCTTTGGGCAGCAAAATCTGACTTTCCGG...GAACGTTGCTGGTGGGGTCCTTATTTCTGGCAGGAATGTCGACTGTAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp GGATTAGATGGTGTCAGGGGTGGCAATGACGGTGAGCAGGAAATGTCTGGGTCTGGCACACAGCATCCATaGTCCTTGCTGTTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: GLDGVRGGNDGEQEMSGSGTQHP*SLLFPR
Trigger: TCTGGGAAACAGCAAGGACAATGGATGCTGTGTGCC...AGACCCAGACATTTCCTGCTCACCGTCATTGCCACCCCTGACACCATCTAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS GCA 90 bp GTTGCCATCATAAACCTTGAGGACATCTCCTTCGGAGAGTTCGAATaGCCTGGCTTTCAGCTGAATTCCCTTCCCTGGCTGGGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: VAIINLEDISFGEFE*PGFQLNSLPWLGLD
Trigger: ATCCAGACCCAGCCAGGGAAGGGAATTCAGCTGAAAGCCAGGGCATTCGAACTCTCCGAAGGAGATGTCCTCAAGGTTTATGATGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp GAGCTTTGCAGACGGGCTTGGTTCCATTCCATGTCCGGTCCTTGGTaGAGCTCAGCACAGATACTCTATGTGACTCCATCATATAGCCAG +
Preference number: 5 (lower is better)
Translates to: ELCRRAWFHSMSGPW*SSAQILYVTPSYSQ
Trigger: CTGGCTATATGATGGAGTCACATAGAGTATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAATGGAACCAAGCCCGTCTGCAAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 90 bp ACTGGGGATAGCTTCCAGGGTAGCTCTGGCTCAGGATCACGCCTGTaGAGTCTGTCAGAAGCTCATTTGTTGGACAGTGCACTTCACATA +
Preference number: 5 (lower is better)
Translates to: TGDSFQGSSGSGSRL*SLSEAHLLDSALHI
Trigger: TATGTGAAGTGCACTGTCCAACAAATGAGCTTCTGACAGACTCCACAGGCGTGATCCTGAGCCAGAGCTACCCTGGAAGCTATCCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCTCTCAACTGTCCCATaGGGACCGTGCAGTTGGAAC +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLSTVP*GPCSWN
Trigger: GTTCCAACTGCACGGTCCCAATGGGACAGTTGAGAG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGACCTTGTCACCGAGGTaGAAGGTTGAACCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLTLSPR*KVEPCW
Trigger: CCAGCAGGGTTCAACCTTCAACCTCGGTGACAAGGT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGATCCGCTTGGACCCTaGCAGGTCATAGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFDPLGP*QVIALV
Trigger: AACGAGGGCTATGACCTGCAAGGGTCCAAGCGGATC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGCTGTTGTTACAACCTGCAAGGTTCCCAGGGACGGGGCCCCTGGATTAGCTCTTCTTAGCCGACCATaGGTTATTCTTTTGGCATGT +
Preference number: 5 (lower is better)
Translates to: AAVVTTCKVPRDGAPGLALLSRP*VILLAC
Trigger: ACATGCCAAAAGAATAACCAATGGTCGGCTAAGAAG...AGCTAATCCAGGGGCCCCGTCCCTGGGAACCTTGCAGGTTGTAACAACAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTCCACGTCAATGTCGTaGAAGGCCAGGTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFSTSMS*KARWMR
Trigger: CCGCATCCACCTGGCCTTCAACGACATTGACGTGGA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGGATCCGGGCACTCGTaGTGTCGGAAGGTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTGSGHS*CRKVVK
Trigger: TTTTACCACCTTCCGACACAACGAGTGCCCGGATCC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGGTCCCACTGGAGCCTaGAATGAAGCCACCACAGAG +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMGPTGA*NEATTE
Trigger: CTCTGTGGTGGCTTCATTCAAGGCTCCAGTGGGACC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCAGACTGGCCGGGGATaGTTCCACACGGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPQTGRG*FHTGFP
Trigger: TGGGAAGCCCGTGTGGAACAATCCCCGGCCAGTCTG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGCATCACGGTGGAACTaGAGCAGGACCTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLASRWN*SRTWLD
Trigger: ATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATGC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAGCATCACGGTGGAACTaGAGCAGGACCTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTASRWN*SRTWLD
Trigger: ATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATGC...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGTCAGAAGCTCATTTGTaGGACAGTGCACTTCACATA +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGSEAHL*DSALHI
Trigger: TATGTGAAGTGCACTGTCCAACAAATGAGCTTCTGA...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCTTTTCAGGACACGGCAGGAGTCCTCTCCAGGGTAACTGGCATAGATGGCGGTCAGAAGCTCATTTGTaGGACAGTGCACTTCACATA +
Preference number: 5 (lower is better)
Translates to: AFSGHGRSPLQGNWHRWRSEAHL*DSALHI
Trigger: TATGTGAAGTGCACTGTCCAACAAATGAGCTTCTGA...CCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGTCCTGAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGACGCAGGGGAGGGGCTCAAACTCATCATATaGCTTCTCGCTGAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: AGAPRASHGTLQGDAGEGLKLII*LLAEEV
Trigger: TACTTCCTCAGCGAGAAGCAATATGATGAGTTTGAG...CCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACCCACAGGAAAGAGCTaGACAGAGAGGGATGGCTTC +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTPTGKS*TERDGF
Trigger: GAAGCCATCCCTCTCTGTCAAGCTCTTTCCTGTGGG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACACAGCTGTACATGGCCTaGGTTCCCACTGTGTACTCC +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTQLYMA*VPTVYS
Trigger: GGAGTACACAGTGGGAACCAAGGCCATGTACAGCTG...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTATGGTGGCATTGACCTaGCTGTTGGCAACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAMVALT*LLATWK
Trigger: CTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCAT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGCCCTTGACAGAGCCTaGGTAGATGAAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMALDRA*VDEGGS
Trigger: GGAGCCACCTTCATCTACCAAGGCTCTGTCAAGGGC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAAATGTGGCCCGAACATaGGTGTTCTCGTGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTNVART*VFSWPA
Trigger: TGCTGGCCACGAGAACACCAATGTTCGGGCCACATT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCTGTCTTCTCTTCTCTTaGTCAGTTGACAGCCAGACT +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCCLLFS*SVDSQT
Trigger: AGTCTGGCTGTCAACTGACAAAGAGAAGAGAAGACA...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCAGTGCTACAGTCGACATTCCTGCCAGAAATAAGGACCCCACCAGCAACGTTCCCCAGTGGTGTCTCCTaGCTCTTAAGGATCACCAAG +
Preference number: 5 (lower is better)
Translates to: SVLQSTFLPEIRTPPATFPSGVS*LLRITK
Trigger: CTTGGTGATCCTTAAGAGCAAGGAGACACCACTGGG...GAACGTTGCTGGTGGGGTCCTTATTTCTGGCAGGAATGTCGACTGTAGCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCAAAGATGACAAGTCGTTaGCCTGTCTACCTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPKMTSR*PVYLPR
Trigger: CCTTGGCAGGTAGACAGGCAAACGACTTGTCATCTT...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS TCA 90 bp GGCCCACCGTTTTGTACTCCAAGTGGAAGCCAGCTGCAGATACGCTaGTATCTGAGTAGAAATGAAGGTAGAGCTGGTTGGAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GPPFCTPSGSQLQIR*YLSRNEGRAGWRCC
Trigger: ACAGCACCTCCAACCAGCTCTACCTTCATTTCTACTCAGATATCAGCGTATCTGCAGCTGGCTTCCACTTGGAGTACAAAACGGTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp TCAAACTCCTCAAAGGCGAGCTTGATCACCTGTAGGCCAGTTCCATaGACAGGGTTAGGCACACAGCATCCATTGTCCTTGCTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: SNSSKASLITCRPVP*TGLGTQHPLSLLFP
Trigger: GGGAAACAGCAAGGACAATGGATGCTGTGTGCCTAACCCTGTTCATGGAACTGGCCTACAGGTGATCAAGCTCGCCTTTGAGGAGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS CCA 90 bp AATCTGGTGGGAGTAAGTCAAATCCTGATACTCCAGCTTGAATCCTaGCCGATTCTGGGAGTGGTCGCTGTGGAAATACACGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: NLVGVSQILILQLES*PILGVVAVEIHGGL
Trigger: GAGACCACCGTGTATTTCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGGATTTGACTTACTCCCACCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS CCA 90 bp GATCAAGATCCCAGACATAGGAAGCGGCGACGGGAGGAGTTGAGTTaGTTCTTTCCAACTCCGAGAGATCAAAACCTCTCAGGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: DQDPRHRKRRREELS*FFPTPRDQNLSGRK
Trigger: CTTCCTTCCTGAGAGGTTTTGATCTCTCGGAGTTGGAAAGAACCAACTCAACTCCTCCCGTCGCCGCTTCCTATGTCTGGGATCTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTCTGGCCAGCTGATCTaGGGTGGTGGCTTTGAACTT +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSGQLI*GGGFEL
Trigger: AAGTTCAAAGCCACCACCCAAGATCAGCTGGCCAGA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCTTCTTGACTTGGTATaGGGCACTGAATCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSLLDLV*GTESAL
Trigger: CAGCGCGGATTCAGTGCCCAATACCAAGTCAAGAAG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCAATTTGCTTCTTGACTaGGTATTGGGCACTGAATCC +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCNLLLD*VLGTES
Trigger: GGATTCAGTGCCCAATACCAAGTCAAGAAGCAAATT...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGAGAACTCAATTTGCTTCTaGACTTGGTATTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: WVPHQQVLLEHLMELYKENSICF*TWYWAL
Trigger: CAGTGCCCAATACCAAGTCAAGAAGCAAATTGAGTT...CTCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGGAAATGTCTGGGTCTGAGCCTGGTGGGCTTTGTCCCAGTGGTGTCTCCTTGCCATTGGTTATTCTTTaGGCATGTGATTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: QEMSGSEPGGLCPSGVSLPLVIL*ACDCLL
Trigger: CAGAAGGCAATCACATGCCAAAAGAATAACCAATGG...CAAGGAGACACCACTGGGACAAAGCCCACCAGGCTCAGACCCAGACATTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp CTGGGTGCCCCACCAGCAGGTGCTCCTCGAGCATCTCATGGAACTTTACAAGGACTTCTTAGCCGACCATaGGTTATTCTTTTGGCATGT +
Preference number: 5 (lower is better)
Translates to: LGAPPAGAPRASHGTLQGLLSRP*VILLAC
Trigger: ACATGCCAAAAGAATAACCAATGGTCGGCTAAGAAG...TCCTTGTAAAGTTCCATGAGATGCTCGAGGAGCACCTGCTGGTGGGGCACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATCTGCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCCTTCTTAGCCGACCATaGGTTATTCTTTTGGCATGT +
Preference number: 5 (lower is better)
Translates to: ICPVPFQASGGGEKCQGCLLSRP*VILLAC
Trigger: ACATGCCAAAAGAATAACCAATGGTCGGCTAAGAAG...GCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTACGGGAGGAGTTGAGTaGGTTCTTTCCAACTCCGAG +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSTGGVE*VLSNSE
Trigger: CTCGGAGTTGGAAAGAACCAACTCAACTCCTCCCGT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS-3UTR CAA 90 bp GTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGAGGGTGGCCAGTCAATaGATACCCCGGGAGGCACTC +
Preference number: 5 (lower is better)
Translates to: VILWVSFIKALIPFMRALRVASQ*IPREAL
Trigger: GAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCT...CAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTCCGGTTGGTGCCATGTaGACACGTGAGGACAGGGTG +
Preference number: 5 (lower is better)
Translates to: LWVSFIKALIPFMRALLSPVGAM*TREDRV
Trigger: CACCCTGTCCTCACGTGTCAACATGGCACCAACCGG...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCAAGGGACTTCACACTaGGGCAGGGGGTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLQGTSH*GRGWSQ
Trigger: CTGGGACCACCCCCTGCCCAAGTGTGAAGTCCCTTG...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GAGACGAACGAAGATGGGCACTGGGCACTGTGCTCAGGGGAGCCTACTTCCTGCACGATGTCACCTATATaGAATTCTTCATTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: ETNEDGHWALCSGEPTSCTMSPI*NSSFSV
Trigger: CACAGAGAATGAAGAATTCAATATAGGTGACATCGT...GCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCCTGTCAGAAGCTCATTaGTTGGACAGTGCACTTCAC +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRLSEAH*LDSALH
Trigger: GTGAAGTGCACTGTCCAACAAATGAGCTTCTGACAG...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCCCACAGGAAAGAGCTaGACAGAGAGGGATGGCTTC +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFPTGKS*TERDGF
Trigger: GAAGCCATCCCTCTCTGTCAAGCTCTTTCCTGTGGG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGCAGCTGTACATGGCCTaGGTTCCCACTGTGTACTCC +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMQLYMA*VPTVYS
Trigger: GGAGTACACAGTGGGAACCAAGGCCATGTACAGCTG...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTTCCATGTCCGGTCCTaGGTGCAGCTCAGCACAGAT +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMFHVRS*VQLSTD
Trigger: ATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATTGCACATGAGAGCTTaGCAGACGGGCTTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLHMRA*QTGLVP
Trigger: TGGAACCAAGCCCGTCTGCAAAGCTCTCATGTGCAA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTATGAGCGGAGGTGGCTaGCACATGAGAGCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFMSGGG*HMRALQ
Trigger: CTGCAAAGCTCTCATGTGCAAGCCACCTCCGCTCAT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGGCTCCCGGGCAGTGTaGATGGGTCTCCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPGSRAV*MGLPLG
Trigger: GCCCAGTGGGAGACCCATCAACACTGCCCGGGAGCC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTCCTGAGGTCCAGTCTTaGAAAGCCGAACTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSPEVQS*KAELPK
Trigger: TTTGGGCAGTTCGGCTTTCAAAGACTGGACCTCAGG...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GCCCTGTTCCCTTCCAAGCCTCTGGAGGTGGAGAGAAATGTCAGGGGTGCGGAGACACAGATCCACAAGTaGCTTTGCTATTTTAAATCC +
Preference number: 5 (lower is better)
Translates to: ALFPSKPLEVERNVRGAETQIHK*LCYFKS
Trigger: GGATTTAAAATAGCAAAGCAACTTGTGGATCTGTGT...CTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTCAGACTGATCTGGGTTaGCATTCTGACTCCACACTT +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLAQTDLG*HSDSTL
Trigger: AAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTG...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ACTGGAGGCTGGTGGTGTCTACAGCCTTACAAACTTGACAGTCCCTTCCACCCTCAGCATCCATTGTCCTaGCTGTTTCCCAGAAGACAA +
Preference number: 5 (lower is better)
Translates to: TGGWWCLQPYKLDSPFHPQHPLS*LFPRRQ
Trigger: TTGTCTTCTGGGAAACAGCAAGGACAATGGATGCTG...AGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTAGACACCACCAGCCTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp ACCAAGAAGGGTAAGACGGTGTTGAAGAGCATCCCCAAATGTCAGGAGCACTTGTCCTCAAAGGCGAGCTaGATCACCTGTAGGCCAGTT +
Preference number: 5 (lower is better)
Translates to: TKKGKTVLKSIPKCQEHLSSKAS*ITCRPV
Trigger: AACTGGCCTACAGGTGATCAAGCTCGCCTTTGAGGA...CAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGTCTTACCCTTCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS TCA 90 bp TCATATAGCCAGGGACACACTGATATGTCACAGTTTTGTTGTACCTaGAGTCATTGCCCAGCCGAAGGCCATTGGCTGGAATCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SYSQGHTDMSQFCCT*SHCPAEGHWLESQG
Trigger: ACCCTGGGATTCCAGCCAATGGCCTTCGGCTGGGCAATGACTTCAGGTACAACAAAACTGTGACATATCAGTGTGTCCCTGGCTATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 90 bp AACCTGACAAAGATGACAAGTCGTTTGCCTGTCTACCTGCCAAGGTaGCTGCGTGTCTGTCCAGTTGTTGGACTGTCTACAGAAATGCCT +
Preference number: 5 (lower is better)
Translates to: NLTKMTSRLPVYLPR*LRVCPVVGLSTEMP
Trigger: AGGCATTTCTGTAGACAGTCCAACAACTGGACAGACACGCAGGCACCTTGGCAGGTAGACAGGCAAACGACTTGTCATCTTTGTCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS CCA 90 bp TTGAAGAAGCAGGAGAACACGCAGCCTGGCTTCTTAGCCGACCATTaGTTATTCTTTTGGCATGTGATTGCCTTCTGTCCCACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LKKQENTQPGFLADH*LFFWHVIAFCPTSS
Trigger: TGAGCTGGTGGGACAGAAGGCAATCACATGCCAAAAGAATAACCAATGGTCGGCTAAGAAGCCAGGCTGCGTGTTCTCCTGCTTCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTCTGGCCAGCTGATCTaGGGTGGTGGCTTTGAACTT +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMSGQLI*GGGFEL
Trigger: AAGTTCAAAGCCACCACCCAAGATCAGCTGGCCAGA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTCTGGCTGTTGTCTTaGCTGGGCATCAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSFWLLS*LGISFT
Trigger: TGTGAAGCTGATGCCCAGCAAAGACAACAGCCAGAA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGTGGTAAAAGTGATGTaGAAGCCCCTCTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSVVKVM*KPLFPV
Trigger: CACAGGGAAGAGGGGCTTCAACATCACTTTTACCAC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTGCAGGACGACCGAGTaGAAGGTGCTATGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPCRTTE*KVLCRS
Trigger: GGACCTGCATAGCACCTTCAACTCGGTCGTCCTGCA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGGGATCCCAGGGTCATaGCAGGACGTTGCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLGIPGS*QDVAVD
Trigger: GTCCACAGCAACGTCCTGCAATGACCCTGGGATCCC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTGCTGGTGCGAGGCCTTaGGCGCTGAACTTAATGAGA +
Preference number: 5 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTAGARP*ALNLMR
Trigger: TCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGC...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTATCTTCCACACACAGTaGAGGCTGTTGAGGTACGGC +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFIFHTQ*RLLRYG
Trigger: GCCGTACCTCAACAGCCTCAACTGTGTGTGGAAGAT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAGAAGGGCAGGCACGGTaGTTCCTGAGAAACTCCCCA +
Preference number: 5 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKEGQAR*FLRNSP
Trigger: TGGGGAGTTTCTCAGGAACAACCGTGCCTGCCCTTC...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTAGGGTGGCCAGTCAATaGATACCCCGGGAGGCACTC +
Preference number: 5 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLRVASQ*IPREAL
Trigger: GAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCT...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATCAAGGGACTTCACACTaGGGCAGGGGGTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNQGTSH*GRGWSQ
Trigger: CTGGGACCACCCCCTGCCCAAGTGTGAAGTCCCTTG...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp ATAACACTGTATAGTCACACCAGAGCAGATACTGTAGCAGATACTGCAGCAGATGAGCCGTGGTGCTGTTaGCTGTGGCCCATCCCAGAT +
Preference number: 5 (lower is better)
Translates to: ITLYSHTRADTVADTAADEPWCC*LWPIPD
Trigger: ATCTGGGATGGGCCACAGCAAACAGCACCACGGCTC...ATCTGCTGCAGTATCTGCTACAGTATCTGCTCTGGTGTGACTATACAGTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGAGCCGTGGTGCTGTTaGCTGTGGCCCATCCCAGAT +
Preference number: 5 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLEPWCC*LWPIPD
Trigger: ATCTGGGATGGGCCACAGCAAACAGCACCACGGCTC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GACAGACAAAGTTACATAGCTTGCATGTGTCAGAGCCAAGGTTTGAACCCGTCTCTCTGCACTGTTTTCTaGGCCATGCTCCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: DRQSYIACMCQSQGLNPSLCTVF*AMLRVK
Trigger: CTTCACCCGGAGCATGGCCAAGAAAACAGTGCAGAG...AGACGGGTTCAAACCTTGGCTCTGACACATGCAAGCTATGTAACTTTGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATTGAGCAGGACCTGGTaGGATGAACTCTGCACTGTT +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTLSRTW*DELCTV
Trigger: AACAGTGCAGAGTTCATCCAACCAGGTCCTGCTCAA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACCCACCACCTTCCCATaGGGGATGAGCGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPPTTFP*GMSGGG
Trigger: GCCACCTCCGCTCATCCCCAATGGGAAGGTGGTGGG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACCCAGGAATCAAGGCTaGGGTGAGCGGTGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPPRNQG*GERWLP
Trigger: CGGGAGCCACCGCTCACCCAAGCCTTGATTCCTGGG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGCATTGACCTTGCTGTaGGCAACTTGGAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMALTLL*ATWKPV
Trigger: GACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTATGGTGGCATTGACCTaGCTGTTGGCAACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSMVALT*LLATWK
Trigger: CTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCAT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTGTCTGGGCCACAGACTaGTCTTCTCTTCTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSVWATD*SSLLFV
Trigger: GACAAAGAGAAGAGAAGACAAGTCTGTGGCCCAGAC...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGATAGCCATTGTTTTTaGGGTACTGGGGCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLDSHCF*GTGAGL
Trigger: CAAGCCTGCCCCAGTACCCAAAAAACAATGGCTATC...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGGAAATGTCTGGGTCTGAGCCTGGTGGGCTTTGTCCCAGTGGTGTCTCCTTGATTAGGCTCATTTTCTaGCTTGTTCCAAGTCCCTTT +
Preference number: 5 (lower is better)
Translates to: QEMSGSEPGGLCPSGVSLIRLIF*LVPSPF
Trigger: AAAGGGACTTGGAACAAGCAAGAAAATGAGCCTAAT...CAAGGAGACACCACTGGGACAAAGCCCACCAGGCTCAGACCCAGACATTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp ACTTCCCAAGAGAGAACATCTGATTGCCCCTGCTGCAGTCAGCTCAGGTGTCCACAGAGTCTCACTATGTaGCCCAGGTTCATACATGAA +
Preference number: 5 (lower is better)
Translates to: TSQERTSDCPCCSQLRCPQSLTM*PRFIHE
Trigger: TTCATGTATGAACCTGGGCAACATAGTGAGACTCTG...TGGACACCTGAGCTGACTGCAGCAGGGGCAATCAGATGTTCTCTCTTGGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CCTCTTCATCTCTTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCAACTCAATTTGCTTCTaGACTTGGTATTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: PLHLFSVWGTGHEASFMRNSICF*TWYWAL
Trigger: CAGTGCCCAATACCAAGTCAAGAAGCAAATTGAGTT...GCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTTCTGGCTGTTGTCTTaGCTGGGCATCAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFFWLLS*LGISFT
Trigger: TGTGAAGCTGATGCCCAGCAAAGACAACAGCCAGAA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTCCTCAAAGGCGAGCTaGATCACCTTGGAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSSKAS*ITLEGL
Trigger: CAACCCCTCCAAGGTGATCAAGCTCGCCTTTGAGGA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGTGGTAAAAGTGATGTaGAAGCCCCTCTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMVVKVM*KPLFPV
Trigger: CACAGGGAAGAGGGGCTTCAACATCACTTTTACCAC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATGCAGTTCAAAGCCCTaGCTGGTGTTTTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTCSSKP*LVFSAS
Trigger: TGATGCTGAAAACACCAGCAAGGGCTTTGAACTGCA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAATGCAGGACGACCGAGTaGAAGGTGCTATGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQCRTTE*KVLCRS
Trigger: GGACCTGCATAGCACCTTCAACTCGGTCGTCCTGCA...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATGCGAGGAAGAGGCTGTaGCTGCTGCTTTCAATGCGG +
Preference number: 5 (lower is better)
Translates to: PGKSRISWVLFQLPKREHARKRL*LLLSMR
Trigger: CCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGC...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGGTTCGAGGAACCGCTaGGTAGACAAAGTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPGSRNR*VDKVEA
Trigger: GGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATCTGCGCTCTGTGAGGTaGCCTCCACACGGCACCACA +
Preference number: 5 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNLRSVR*PPHGTT
Trigger: TGTGGTGCCGTGTGGAGGCAACCTCACAGAGCGCAG...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTATCTTCCACACACAGTaGAGGCTGTTGAGGTACGGC +
Preference number: 5 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTIFHTQ*RLLRYG
Trigger: GCCGTACCTCAACAGCCTCAACTGTGTGTGGAAGAT...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp CCACTGAGAAGGCTTCAGTGTGGTGATTCTGTGGGTCTCTTTTATAAAGGCACTCACAAAACTGACAACTaGGATCTGGATGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: PLRRLQCGDSVGLFYKGTHKTDN*DLDASA
Trigger: GGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGTG...AGTGCCTTTATAAAAGAGACCCACAGAATCACCACACTGAAGCCTTCTCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTGGGTCTGGGCACTCTaGAAGTTCATAGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFWVWAL*KFIGFT
Trigger: TGTGAAGCCTATGAACTTCAAGAGTGCCCAGACCCA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS-3UTR CAA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCACCCCTCACAATGCCATaGGCAAAGGGCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPPLTMP*AKGSGS
Trigger: AGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGG...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGCTGTCAGAAGCTCATTaGTTGGACAGTGCACTTCAC +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLLSEAH*LDSALH
Trigger: GTGAAGTGCACTGTCCAACAAATGAGCTTCTGACAG...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCCCACAGGAAAGAGCTaGACAGAGAGGGATGGCTTC +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPPTGKS*TERDGF
Trigger: GAAGCCATCCCTCTCTGTCAAGCTCTTTCCTGTGGG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTAGTGTGTATCCGGAATaGCAGGAGAAGATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSSVYPE*QEKMAV
Trigger: AACAGCCATCTTCTCCTGCAATTCCGGATACACACT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGAAGCAGGTAGCCTTTTaGACAACGGAAGAGGACTGT +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLKQVAF*TTEEDC
Trigger: ACAGTCCTCTTCCGTTGTCAAAAAGGCTACCTGCTT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACAAAGCAGGTAGCCTTTTaGACAACGGAAGAGGACTGT +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTKQVAF*TTEEDC
Trigger: ACAGTCCTCTTCCGTTGTCAAAAAGGCTACCTGCTT...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACACTCCAGGTCAGGTTaGGGAGGCAGGTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPHSRSG*GGRSWW
Trigger: CCACCAGGACCTGCCTCCCAAACCTGACCTGGAGTG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGGCTCCCGGGCAGTGTaGATGGGTCTCCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMGSRAV*MGLPLG
Trigger: GCCCAGTGGGAGACCCATCAACACTGCCCGGGAGCC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTTCTGTGGGCTGGATGTaGCGGTCGTACATTGGGTTC +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPSVGWM*RSYIGF
Trigger: GAACCCAATGTACGACCGCAACATCCAGCCCACAGA...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGGATAGCCATTGTTTTTaGGGTACTGGGGCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMDSHCF*GTGAGL
Trigger: CAAGCCTGCCCCAGTACCCAAAAAACAATGGCTATC...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AAGAAGGGTAAGACGGTGTTGAAGAGCATCCCCAAATGTCAGGAGCACTTGTTCTACAGCCTTACAAACTaGACAGTCCCTTCCACCCTG +
Preference number: 5 (lower is better)
Translates to: KKGKTVLKSIPKCQEHLFYSLTN*TVPSTL
Trigger: CAGGGTGGAAGGGACTGTCAAGTTTGTAAGGCTGTA...GAACAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGTCTTACCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS TCA 90 bp CGTTTTGTACTCCAAGTGGAAGCCAGCTGCAGATACGCTGATATCTaGGTAGAAATGAAGGTAGAGCTGGTTGGAGGTGCTGTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: RFVLQVEASCRYADI*VEMKVELVGGAVQK
Trigger: CTTCTGAACAGCACCTCCAACCAGCTCTACCTTCATTTCTACTCAGATATCAGCGTATCTGCAGCTGGCTTCCACTTGGAGTACAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp CACAGGAAAGTTGGGGGACAGCAAAGTACCCTGAGTGCCTGTGACTaGATTCCCACACTCAGCTGGAAAGAGAATCACAATAACCATAGA +
Preference number: 5 (lower is better)
Translates to: HRKVGGQQSTLSACD*IPTLSWKENHNNHR
Trigger: TCTATGGTTATTGTGATTCTCTTTCCAGCTGAGTGTGGGAATTCAGTCACAGGCACTCAGGGTACTTTGCTGTCCCCCAACTTTCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS TCA 90 bp ACACAGCTGGCCCAAGGTGGAGCTGGGAGTAAAATCCAGCTTTCCTaGTTTCTGGTTAAAATATCTGCAGTGATCGGAGAAAGCTATGGC +
Preference number: 5 (lower is better)
Translates to: TQLAQGGAGSKIQLS*FLVKISAVIGESYG
Trigger: GCCATAGCTTTCTCCGATCACTGCAGATATTTTAACCAGAAATCAGGAAAGCTGGATTTTACTCCCAGCTCCACCTTGGGCCAGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS CCA 90 bp TTCGGAGAGTTCGAATGCCCTGGCTTTCAGCTGAATTCCCTTCCCTaGCTGGGTCTGGATGGAGTAGATGCATTCATGATTGTTATTGTA +
Preference number: 5 (lower is better)
Translates to: FGEFECPGFQLNSLP*LGLDGVDAFMIVIV
Trigger: TACAATAACAATCATGAATGCATCTACTCCATCCAGACCCAGCCAGGGAAGGGAATTCAGCTGAAAGCCAGGGCATTCGAACTCTCCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCTTCTTGACTTGGTATaGGGCACTGAATCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPLLDLV*GTESAL
Trigger: CAGCGCGGATTCAGTGCCCAATACCAAGTCAAGAAG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGGTCATTGCAGGACGTaGCTGTGGACACTGAAAATT +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFGHCRT*LWTLKI
Trigger: AATTTTCAGTGTCCACAGCAACGTCCTGCAATGACC...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAGGGAGCGATGCATGTaGGCGGGCTGGGCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRERCM*AGWAAR
Trigger: TCTGGCAGCCCAGCCCGCCAACATGCATCGCTCCCT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCCAGACTGGCCGGGGATaGTTCCACACGGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVQTGRG*FHTGFP
Trigger: TGGGAAGCCCGTGTGGAACAATCCCCGGCCAGTCTG...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATGCTGGTGCGAGGCCTTaGGCGCTGAACTTAATGAGA +
Preference number: 5 (lower is better)
Translates to: PGKSRISWVLFQLPKREHAGARP*ALNLMR
Trigger: TCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGC...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp TTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTGACCTAATTGCCGGTTCGAGGAACCGCTaGGTAGACAAAGTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: FIKALIPFMRALLSDLIAGSRNR*VDKVEA
Trigger: GGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACC...GGCAATTAGGTCAGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTGCAGCAGGCTGAGGTaGAGGCGGACGCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMCSRLR*RRTPWP
Trigger: TGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGGTGGGACATTGCGGTaGCTCCATAGGCCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPGGTLR*LHRPVS
Trigger: GGACACAGGCCTATGGAGCAACCGCAATGTCCCACC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCGACGTTGGCATGCGTaGGCGTCTCTGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRRWHA*ASLAAC
Trigger: GCAGGCAGCCAGAGACGCCAACGCATGCCAACGTCG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGTTCCACAGGGAATTCTaGGCAAAAACATCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMFHREF*AKTSPG
Trigger: TCCTGGGGATGTTTTTGCCAAGAATTCCCTGTGGAA...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CATGATGGGATGTGTCCTACTGTTACAGTCACCGAGTCACCATGTCCTCACACATCTTCTCTTTGTCAGTaGACAGCCAGACTTGACCTT +
Preference number: 5 (lower is better)
Translates to: HDGMCPTVTVTESPCPHTSSLCQ*TARLDL
Trigger: AAGGTCAAGTCTGGCTGTCAACTGACAAAGAGAAGA...TGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCTGCTGCCCCCAGACTaGGCATCCTGTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMLLPPD*ASCLGH
Trigger: GTGGCCCAGACAGGATGCCAAGTCTGGGGGCAGCAG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTCAGACTGATCTGGGTTaGCATTCTGACTCCACACTT +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFQTDLG*HSDSTL
Trigger: AAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTG...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATACAGGGGCTTAAGCTaGTGGGGGCCTTCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPYRGLS*WGPSRG
Trigger: TCCTCGGGAAGGCCCCCACAAGCTTAAGCCCCTGTA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCTCTGTCAGCCTCCATaGTGTCTGCTGGAAATGGAC +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPLCQPP*CLLEMD
Trigger: GTCCATTTCCAGCAGACACAATGGAGGCTGACAGAG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AATAAGGACCCCACCAGCAACGTTCCGAGGAGTAGAATAAACCAACCAGAGTGCGGCTCATTTTCTTGCTaGTTCCAAGTCCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: NKDPTSNVPRSRINQPECGSFSC*FQVPFF
Trigger: GAAGAAAGGGACTTGGAACAAGCAAGAAAATGAGCC...GCACTCTGGTTGGTTTATTCTACTCCTCGGAACGTTGCTGGTGGGGTCCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp ACCAAGAAGGGTAAGACGGTGTTGAAGAGCATCCCCAAATGTCAGGAGCACTTGACACTTAGACCCTCCTaGTTGCATTGTATGTTCCCT +
Preference number: 5 (lower is better)
Translates to: TKKGKTVLKSIPKCQEHLTLRPS*LHCMFP
Trigger: AGGGAACATACAATGCAACAAGGAGGGTCTAAGTGT...CAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGTCTTACCCTTCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp AAGAAGGGTAAGACGGTGTTGAAGAGCATCCCCAAATGTCAGGAGCACTTGTTCAAGGGTAAGACGGTGTaGAAGAGCATCCCCAAATGT +
Preference number: 5 (lower is better)
Translates to: KKGKTVLKSIPKCQEHLFKGKTV*KSIPKC
Trigger: ACATTTGGGGATGCTCTTCAACACCGTCTTACCCTT...GAACAAGTGCTCCTGACATTTGGGGATGCTCTTCAACACCGTCTTACCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS TCA 90 bp ATTCCATGTCCGGTCCTTGGTGCAGCTCAGCACAGATACTCTATGTaGCTCCATCATATAGCCAGGGACACACTGATATGTCACAGTTTT +
Preference number: 5 (lower is better)
Translates to: IPCPVLGAAQHRYSM*LHHIARDTLICHSF
Trigger: AAAACTGTGACATATCAGTGTGTCCCTGGCTATATGATGGAGTCACATAGAGTATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp TCACAGTTGTTTTCTGAACCTCCAGTAGAGTTCATCTTTCCCCACTaGGACCTCCACTCTGTTGACAGCAATATCTCCTCTCTACCCATC +
Preference number: 5 (lower is better)
Translates to: SQLFSEPPVEFIFPH*DLHSVDSNISSLPI
Trigger: GATGGGTAGAGAGGAGATATTGCTGTCAACAGAGTGGAGGTCTCAGTGGGGAAAGATGAACTCTACTGGAGGTTCAGAAAACAACTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAGTCGCAGCCAGTTCTaGCTGCTGATAACGGGGGCT +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSRSQF*LLITGA
Trigger: AGCCCCCGTTATCAGCAGCAAGAACTGGCTGCGACT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTTTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAAATCTTCCACACACAGTaGAGGCTGTTGAGGTACGGC +
Preference number: 5 (lower is better)
Translates to: SFQEMGPGKSRISWVLFQIFHTQ*RLLRYG
Trigger: GCCGTACCTCAACAGCCTCAACTGTGTGTGGAAGAT...TTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATGAAGGGCAGGCACGGTaGTTCCTGAGAAACTCCCCA +
Preference number: 5 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNEGQAR*FLRNSP
Trigger: TGGGGAGTTTCTCAGGAACAACCGTGCCTGCCCTTC...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCAAGGGACTTCACACTaGGGCAGGGGGTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMQGTSH*GRGWSQ
Trigger: CTGGGACCACCCCCTGCCCAAGTGTGAAGTCCCTTG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATGAGTACACAGTGCCGTaGGAAGAAGTGATGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PGKSRISWVLFQLPKREHEYTVP*EEVMFP
Trigger: CGGGAACATCACTTCTTCCAACGGCACTGTGTACTC...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GTGATTCTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGAGCAGGACCTGGTaGGATGAACTCTGCACTGTT +
Preference number: 5 (lower is better)
Translates to: VILWVSFIKALIPFMRALLSRTW*DELCTV
Trigger: AACAGTGCAGAGTTCATCCAACCAGGTCCTGCTCAA...CAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAGAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATGCATCACGGTGGAACTaGAGCAGGACCTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNASRWN*SRTWLD
Trigger: ATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATGC...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTATGTCACAGTTTTGTaGTACCTGAAGTCATTGCCC +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSYVTVL*YLKSLP
Trigger: GGGCAATGACTTCAGGTACAACAAAACTGTGACATA...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CAGACCTGGCCACAGTGCTACTGTAGAGATTCATCGGCTCCTCCCTTCTTAGCTACACAGATCCACAAGTaGCTTTGCTATTTTAAATCC +
Preference number: 5 (lower is better)
Translates to: QTWPQCYCRDSSAPPFLATQIHK*LCYFKS
Trigger: GGATTTAAAATAGCAAAGCAACTTGTGGATCTGTGT...AGCTAAGAAGGGAGGAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTTCTTCTCTTTGTCAGTaGACAGCCAGACTTGACCTT +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFSSLCQ*TARLDL
Trigger: AAGGTCAAGTCTGGCTGTCAACTGACAAAGAGAAGA...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGACTCTGTCTTTACCTTaGCAGGCTTCTGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLTLSLP*QASVFS
Trigger: TGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAGT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAATTCCCAGAAGTAGGATaGCTGGGTCCTAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKFPEVG*LGPRLL
Trigger: CAACAACCTAGGACCCAGCAATCCTACTTCTGGGAA...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS GCA 90 bp AGCTCCACCAGCACCATCTTACACCTCTTCCGGAAAGTCAGATTTTaGTGCCCAAAGCCCTCAGCTTCAGAATCAATTTATCTTGTACTT +
Preference number: 5 (lower is better)
Translates to: SSTSTILHLFRKVRF*CPKPSASESIYLVL
Trigger: AAGTACAAGATAAATTGATTCTGAAGCTGAGGGCTTTGGGCAGCAAAATCTGACTTTCCGGAAGAGGTGTAAGATGGTGCTGGTGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATCTTGGGTGGTGGCTTaGAACTTGCCATCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSWVVA*NLPSRA
Trigger: GGCCCTAGATGGCAAGTTCAAAGCCACCACCCAAGA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTAACTCAATTTGCTTCTaGACTTGGTATTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: FSVWGTGHEASFMRTSSFNSICF*TWYWAL
Trigger: CAGTGCCCAATACCAAGTCAAGAAGCAAATTGAGTT...AAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATCCGAGCCTAGTCTTTaGCCCCTTTCGGGTATGCCA +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSEPSL*PLSGMP
Trigger: TGGCATACCCGAAAGGGGCAAAAGACTAGGCTCGGA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GTAGGATTGCTGGGTCCTAGGTTGTTGTATTCCTTGGGAACCTTTGGATGTAAAGGTCATTGCAGGACGTaGCTGTGGACACTGAAAATT +
Preference number: 5 (lower is better)
Translates to: VGLLGPRLLYSLGTFGCKGHCRT*LWTLKI
Trigger: AATTTTCAGTGTCCACAGCAACGTCCTGCAATGACC...TTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGCAATCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCAACCCGTGTGCCGTTCTaGATGGAACCAGGATCAAAA +
Preference number: 5 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPTRVPF*MEPGSK
Trigger: TTTTGATCCTGGTTCCATCAAGAACGGCACACGGGT...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAGGGTGGCCAGTCAATaGATACCCCGGGAGGCACTC +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMRVASQ*IPREAL
Trigger: GAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCCGGTTGGTGCCATGTaGACACGTGAGGACAGGGTG +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMPVGAM*TREDRV
Trigger: CACCCTGTCCTCACGTGTCAACATGGCACCAACCGG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGGCCTACCACCAAGGTAACTTTACACCAAGCCTGTCAATATCTAGATATAATGAGTACACAGTGCCGTaGGAAGAAGTGATGTTCCCG +
Preference number: 5 (lower is better)
Translates to: LAYHQGNFTPSLSISRYNEYTVP*EEVMFP
Trigger: CGGGAACATCACTTCTTCCAACGGCACTGTGTACTC...ATTATATCTAGATATTGACAGGCTTGGTGTAAAGTTACCTTGGTGGTAGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACTCTGCACTGTTTTCTaGGCCATGCTCCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPLCTVF*AMLRVK
Trigger: CTTCACCCGGAGCATGGCCAAGAAAACAGTGCAGAG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGCATCACGGTGGAACTaGAGCAGGACCTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPASRWN*SRTWLD
Trigger: ATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATGC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCAGCCACTCTGTTGTTTTGATTCAGGACCTGCCAGGTCTTTTGCTGGCTATGACTCTGTCTTTACCTTaGCAGGCTTCTGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: FSHSVVLIQDLPGLLLAMTLSLP*QASVFS
Trigger: TGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAGT...CATAGCCAGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATATGGTGCTGCCTGCTTaGTTTCTGTCTCTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: PGKSRISWVLFQLPKREHMVLPA*FLSLVL
Trigger: CAGCACAAGAGACAGAAACAAAGCAGGCAGCACCAT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCATGGGTCTGGGCACTCTaGAAGTTCATAGGCCTGATA +
Preference number: 5 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPWVWAL*KFIGLI
Trigger: TATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCA...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS TCA 90 bp CAAAATCACAATATCTTCATTTGTGCACAAAAACACAGTGCTCCTTaGGAGGTCAGCAGAAGCCCTAGATCCCTTTGGAGAAGGAGAACC +
Preference number: 5 (lower is better)
Translates to: QNHNIFICAQKHSAP*EVSRSPRSLWRRRT
Trigger: GGTTCTCCTTCTCCAAAGGGATCTAGGGCTTCTGCTGACCTCTCAAGGAGCACTGTGTTTTTGTGCACAAATGAAGATATTGTGATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489419.1
CDS GCA 90 bp TCCACCAGCACCATCTTACACCTCTTCCGGAAAGTCAGATTTTGCTaGCCAAAGCCCTCAGCTTCAGAATCAATTTATCTTGTACTTGTT +
Preference number: 5 (lower is better)
Translates to: STSTILHLFRKVRFC*PKPSASESIYLVLV
Trigger: AACAAGTACAAGATAAATTGATTCTGAAGCTGAGGGCTTTGGGCAGCAAAATCTGACTTTCCGGAAGAGGTGTAAGATGGTGCTGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS CCA 90 bp AGCTCCTTCGGTCTTGTCTTCTGTCCTTATGCAAATTTGATCACATaGGCCACCATTAGGCTCATTTTCTTGCTTGTTCCAAGTCCCTTT +
Preference number: 5 (lower is better)
Translates to: SSFGLVFCPYANLIT*ATIRLIFLLVPSPF
Trigger: AAAGGGACTTGGAACAAGCAAGAAAATGAGCCTAATGGTGGCCCATGTGATCAAATTTGCATAAGGACAGAAGACAAGACCGAAGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGATTGGGACCGTGCAGTaGGAACGTGCAGTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMIGTVQ*ERAVLA
Trigger: GGCCAGAACTGCACGTTCCAACTGCACGGTCCCAAT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTGAAGAGGAGCCACATTaGATGATTGGTGCTGACAAT +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPEEEPH*MIGADN
Trigger: ATTGTCAGCACCAATCATCAAATGTGGCTCCTCTTC...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GAAGAGCAGCAATCCATTGCACTTGGATTTTTATCTTTTCAGGAGATGGGTCCATGCAGTTCAAAGCCCTaGCTGGTGTTTTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: EEQQSIALGFLSFQEMGPCSSKP*LVFSAS
Trigger: TGATGCTGAAAACACCAGCAAGGGCTTTGAACTGCA...TGGACCCATCTCCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGCGAGGAAGAGGCTGTaGCTGCTGCTTTCAATGCGG +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMARKRL*LLLSMR
Trigger: CCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCCTCAGGCCCACCGTTTaGTACTCCAAGTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVLRPTV*YSKWKP
Trigger: TGGCTTCCACTTGGAGTACAAAACGGTGGGCCTGAG...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp TCTCTGTGTGGGGAACAGGGCATGAAGCATCCTTCATGCGCACTTCTAGTTTTGACGATGTCACCTATATaGAATTCTTCATTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SLCGEQGMKHPSCALLVLTMSPI*NSSFSV
Trigger: CACAGAGAATGAAGAATTCAATATAGGTGACATCGT...CAAAACTAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACGCAGGTACACAGAGTaGCTTGAGCTGGTGACAATC +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPRRYTE*LELVTI
Trigger: GATTGTCACCAGCTCAAGCAACTCTGTGTACCTGCG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TGGGGCAGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTACACAGATCCACAAGTaGCTTTGCTATTTTAAATCC +
Preference number: 5 (lower is better)
Translates to: WGRLIWVCILTPHFLTLSTQIHK*LCYFKS
Trigger: GGATTTAAAATAGCAAAGCAACTTGTGGATCTGTGT...AGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCTGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTGTGTCTGTCCAGTTGTaGGACTGTCTACAGAAATGC +
Preference number: 5 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLVSVQL*DCLQKC
Trigger: GCATTTCTGTAGACAGTCCAACAACTGGACAGACAC...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCTGGGTCCTAGGTTGTaGTATTCCTTGGGAACCTTT +
Preference number: 5 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLLGPRL*YSLGTF
Trigger: AAAGGTTCCCAAGGAATACAACAACCTAGGACCCAG...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTACAAAGTTACATAGCTaGCATGTGTCAGAGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LWVSFIKALIPFMRALLSTKLHS*HVSEPR
Trigger: CCTTGGCTCTGACACATGCAAGCTATGTAACTTTGT...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS GCA 90 bp AGCTGGAAAGAGAATCACAATAACCATAGATTAACCCCCATCAGCTaGATCCAGAAAGCAACTCACAGCTCTGAAGAACCTGACAAAGAT +
Preference number: 5 (lower is better)
Translates to: SWKENHNNHRLTPIS*IQKATHSSEEPDKD
Trigger: ATCTTTGTCAGGTTCTTCAGAGCTGTGAGTTGCTTTCTGGATGCAGCTGATGGGGGTTAATCTATGGTTATTGTGATTCTCTTTCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGGATCCGGGCACTCGTaGTGTCGGAAGGTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMGSGHS*CRKVVK
Trigger: TTTTACCACCTTCCGACACAACGAGTGCCCGGATCC...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCCACAAAACTGACAACTaGGATCTGGATGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVHKTDN*DLDASA
Trigger: GGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGTG...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTCTCAAACTCATCATATaGCTTCTCGCTGAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPLKLII*LLAEEV
Trigger: TACTTCCTCAGCGAGAAGCAATATGATGAGTTTGAG...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATCGATCATGGTGGCATaGACCTTGCTGTTGGCAACT +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSIMVA*TLLLAT
Trigger: AGTTGCCAACAGCAAGGTCAATGCCACCATGATCGA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp GTCTCCTTGCTCTTAAGGATCACCAAGAAGGGTAAGACGGTGTTGAAGAGCATCGTATTTCTTTCACAGTaGTTTTCTGAACCTCCAGTA +
Preference number: 5 (lower is better)
Translates to: VSLLLRITKKGKTVLKSIVFLSQ*FSEPPV
Trigger: TACTGGAGGTTCAGAAAACAACTGTGAAAGAAATAC...GATGCTCTTCAACACCGTCTTACCCTTCTTGGTGATCCTTAAGAGCAAGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp AGACTGATCTGGGTTTGCATTCTGACTCCACACTTCCTAACTCTGTCTTTACCTACGAACACTATTTTCTaGGTGTCCAGGATCTGTACA +
Preference number: 5 (lower is better)
Translates to: RLIWVCILTPHFLTLSLPTNTIF*VSRICT
Trigger: TGTACAGATCCTGGACACCAAGAAAATAGTGTTCGT...AGGTAAAGACAGAGTTAGGAAGTGTGGAGTCAGAATGCAAACCCAGATCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619121.4
CDS-3UTR CAA 90 bp CTGTGGGTCTCTTTTATAAAGGCACTAATCCCATTCATGAGGGCTCTGTTGTCTAGGTTCTTTACATCCTaGTTTCTCTCTGTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LWVSFIKALIPFMRALLSRFFTS*FLSVAS
Trigger: GGAAGCAACAGAGAGAAACAAGGATGTAAAGAACCT...AGACAACAGAGCCCTCATGAATGGGATTAGTGCCTTTATAAAAGAGACCCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS TCA 90 bp TTGCTGTTTCCCAGAAGACAACTTCTATTCCTCAGTCTTAGACTTTaGGTTTCCACACTTAGACCCTCCTTGTTGCATTGTATGTTCCCT +
Preference number: 5 (lower is better)
Translates to: LLFPRRQLLFLSLRL*VSTLRPSLLHCMFP
Trigger: AGGGAACATACAATGCAACAAGGAGGGTCTAAGTGTGGAAACTCAAAGTCTAAGACTGAGGAATAGAAGTTGTCTTCTGGGAAACAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGGTCATTGCAGGACGTaGCTGTGGACACTGAAAATT +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPGHCRT*LWTLKI
Trigger: AATTTTCAGTGTCCACAGCAACGTCCTGCAATGACC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCTTGAGCAGGACCTGGTaGGATGAACTCTGCACTGTT +
Preference number: 5 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVLSRTW*DELCTV
Trigger: AACAGTGCAGAGTTCATCCAACCAGGTCCTGCTCAA...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAAGTGTGTATCCGGAATaGCAGGAGAAGATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPSVYPE*QEKMAV
Trigger: AACAGCCATCTTCTCCTGCAATTCCGGATACACACT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACCATTGAAAGGAACTTaGGGTCTTCTCCTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPPLKGT*GLLLCL
Trigger: CAAGCACAGGAGAAGACCCAAAGTTCCTTTCAATGG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCTCTGTCAGCCTCCATaGTGTCTGCTGGAAATGGAC +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMLCQPP*CLLEMD
Trigger: GTCCATTTCCAGCAGACACAATGGAGGCTGACAGAG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAGAAGAGGAGCCACATTaGATGATTGGTGCTGACAAT +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPEEEPH*MIGADN
Trigger: ATTGTCAGCACCAATCATCAAATGTGGCTCCTCTTC...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGACCCGTGTGCCGTTCTaGATGGAACCAGGATCAAAA +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMTRVPF*MEPGSK
Trigger: TTTTGATCCTGGTTCCATCAAGAACGGCACACGGGT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGCCCACTGTGTACTCCTaGCCAAACACCATTCCATTC +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMPTVYS*PNTIPF
Trigger: GAATGGAATGGTGTTTGGCAAGGAGTACACAGTGGG...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCATGTCTTCTCTTCTCTTaGTCAGTTGACAGCCAGACT +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPCLLFS*SVDSQT
Trigger: AGTCTGGCTGTCAACTGACAAAGAGAAGAGAAGACA...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTCCACTTCTCAATCATTCTCTTTCTGCACATAGGATTGTTCTACTTTTTGGTCTGCGTGTCTGTCCAGTaGTTGGACTGTCTACAGAAA +
Preference number: 5 (lower is better)
Translates to: FHFSIILFLHIGLFYFLVCVSVQ*LDCLQK
Trigger: TTTCTGTAGACAGTCCAACAACTGGACAGACACGCA...GACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTTTTCTGCACATAGGATaGTTCTACTTTTTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLFLHIG*FYFLVH
Trigger: GTGGACCAAAAAGTAGAACAATCCTATGTGCAGAAA...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATAGGTTGTTGTATTCCTaGGGAACCTTTGGATGTAAA +
Preference number: 5 (lower is better)
Translates to: PGKSRISWVLFQLPKREHRLLYS*GTFGCK
Trigger: TTTACATCCAAAGGTTCCCAAGGAATACAACAACCT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCACCATTGGTTATTCTTTaGGCATGTGATTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPPLVIL*ACDCLL
Trigger: CAGAAGGCAATCACATGCCAAAAGAATAACCAATGG...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGTGCAGTTCAAAGCCCTaGCTGGTGTTTTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMCSSKP*LVFSAS
Trigger: TGATGCTGAAAACACCAGCAAGGGCTTTGAACTGCA...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp ATTCCTAAACTCATGAACTTCCCAACAATTCTCATGGAATTCATGAACGACCCAACTCTGTCTTTACCTTaGCAGGCTTCTGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: IPKLMNFPTILMEFMNDPTLSLP*QASVFS
Trigger: TGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAGT...TGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS-3UTR CAA 90 bp TTTCAGGAGATGGGTCCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTAGCAATCCATTGCACTaGGATTTTTATCTTTTCAGG +
Preference number: 5 (lower is better)
Translates to: FQEMGPGKSRISWVLFQLSNPLH*DFYLFR
Trigger: CCTGAAAAGATAAAAATCCAAGTGCAATGGATTGCT...AAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp CCAGGCAAAAGTAGAATCTCTTGGGTCCTATTTCAACTTCCCAAGAGAGAACATAAGAGCAGCAATCCATaGCACTTGGATTTTTATCTT +
Preference number: 5 (lower is better)
Translates to: PGKSRISWVLFQLPKREHKSSNP*HLDFYL
Trigger: AAGATAAAAATCCAAGTGCAATGGATTGCTGCTCTT...ATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS-3UTR CAA 90 bp GTGACTCTGAAGTCCATACTCTTATCACTCTATGGGAAAGTCACAAGTCAAAATTTGTGCATAATAACATaGAGGCTCAGAAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: VTLKSILLSLYGKVTSQNLCIIT*RLRRVK
Trigger: TTTCACCCTTCTGAGCCTCAATGTTATTATGCACAA...ATTTTGACTTGTGACTTTCCCATAGAGTGATAAGAGTATGGACTTCAGAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS-3UTR CAA 90 bp CCTAAATGCTATACTTTGATTCCTAAACTCATGAACTTCCCAACAATTCTCATGAATTTGCTTCTTGACTaGGTATTGGGCACTGAATCC +
Preference number: 5 (lower is better)
Translates to: PKCYTLIPKLMNFPTILMNLLLD*VLGTES
Trigger: GGATTCAGTGCCCAATACCAAGTCAAGAAGCAAATT...CATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS TCA 90 bp GGAGTAAAATCCAGCTTTCCTGATTTCTGGTTAAAATATCTGCAGTaGTCTGTAAATTGCAAATATGTGCATCATTCCATAGATAGGCAC +
Preference number: 5 (lower is better)
Translates to: GVKSSFPDFWLKYLQ*SVNCKYVHHSIDRH
Trigger: GTGCCTATCTATGGAATGATGCACATATTTGCAATTTACAGATCACTGCAGATATTTTAACCAGAAATCAGGAAAGCTGGATTTTACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489419.1
CDS CAA 72 bp CTCCCACTGGGCCGGACCTCCAGGCAGATGGGCGGCTaGCCTGTCCAGCTGCCATCCGCCTTGCAGGTGCGG +
Preference number: 6 (lower is better)
Translates to: LPLGRTSRQMGG*PVQLPSALQVR
Trigger: CCGCACCTGCAAGGCGGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCCTGGAGGTCCGGCCCAGTGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp TGGCCATGCTGTGTCCCACCAGGCGGTAGCCGGCGTTaGAGCCAAAGTGGATGGAGCCCCCGGGCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: WPCCVPPGGSRR*SQSGWSPRAGC
Trigger: GCACCCAGCCCGGGGGCTCCATCCACTTTGGCTGCAACGCCGGCTACCGCCTGGTGGGACACAGCATGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp GGTGGTAGCCCTGGGGGTGCCGGGTACAGATGGCCATaGTGTGTCCCACCAGGCGGTAGCCGGCGTTGCAGC +
Preference number: 6 (lower is better)
Translates to: GGSPGGAGYRWP*CVPPGGSRRCS
Trigger: GCTGCAACGCCGGCTACCGCCTGGTGGGACACAGCATGGCCATCTGTACCCGGCACCCCCAGGGCTACCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp GGACCTCCAGGCAGATGGGCGGCTTGCCTGTCCAGCTaGCATCCGCCTTGCAGGTGCGGTGCTCGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: GPPGRWAACLSS*HPPCRCGARSH
Trigger: GTGGCTCCGAGCACCGCACCTGCAAGGCGGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCCTGGAGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CCACCAGGCGGTAGCCGGCGTTGCAGCCAAAGTGGATaGAGCCCCCGGGCTGGGTGCTGGTCTGGCCTAGGA +
Preference number: 6 (lower is better)
Translates to: PPGGSRRCSQSG*SPRAGCWSGLG
Trigger: TCCTAGGCCAGACCAGCACCCAGCCCGGGGGCTCCATCCACTTTGGCTGCAACGCCGGCTACCGCCTGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp ACCTCCAGGCAGATGGGCGGCTTGCCTGTCCAGCTGCCATCCGCCTaGCAGGTGCGGTGCTCGGAGCCACCCTTGAGGGAGAAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: TSRQMGGLPVQLPSA*QVRCSEPPLREKPS
Trigger: GGAGGGCTTCTCCCTCAAGGGTGGCTCCGAGCACCGCACCTGCAAGGCGGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCCTGGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp TCCCCAGGAATCAAGGCTTGGGTGAGCGGTGGCTCCCGGGCAGTGTaGATGGGTCTCCCACTGGGCCGGACCTCCAGGCAGATGGGCGGC +
Preference number: 6 (lower is better)
Translates to: SPGIKAWVSGGSRAV*MGLPLGRTSRQMGG
Trigger: GCCGCCCATCTGCCTGGAGGTCCGGCCCAGTGGGAGACCCATCAACACTGCCCGGGAGCCACCGCTCACCCAAGCCTTGATTCCTGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GGAAGCCAGGGGACAGGATGGTGCCCCTGCGCTCTGTaGGGTTGCCTCCACACGGCACCACACACGTGGGCG +
Preference number: 6 (lower is better)
Translates to: GSQGTGWCPCAL*GCLHTAPHTWA
Trigger: CGCCCACGTGTGTGGTGCCGTGTGGAGGCAACCTCACAGAGCGCAGGGGCACCATCCTGTCCCCTGGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TCCACAGGTGGTAGCCCTGGGGGTGCCGGGTACAGATaGCCATGCTGTGTCCCACCAGGCGGTAGCCGGCGT +
Preference number: 6 (lower is better)
Translates to: STGGSPGGAGYR*PCCVPPGGSRR
Trigger: ACGCCGGCTACCGCCTGGTGGGACACAGCATGGCCATCTGTACCCGGCACCCCCAGGGCTACCACCTGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp CCAGGGGACAGGATGGTGCCCCTGCGCTCTGTGAGGTaGCCTCCACACGGCACCACACACGTGGGCGCTGAG +
Preference number: 6 (lower is better)
Translates to: PGDRMVPLRSVR*PPHGTTHVGAE
Trigger: CTCAGCGCCCACGTGTGTGGTGCCGTGTGGAGGCAACCTCACAGAGCGCAGGGGCACCATCCTGTCCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp CAGATGGGCGGCTTGCCTGTCCAGCTGCCATCCGCCTaGCAGGTGCGGTGCTCGGAGCCACCCTTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: QMGGLPVQLPSA*QVRCSEPPLRE
Trigger: CTCCCTCAAGGGTGGCTCCGAGCACCGCACCTGCAAGGCGGATGGCAGCTGGACAGGCAAGCCGCCCATCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CACTCAGGCTGCGAGCCGCTCCACGAGCCATTGGCTTaGCAGGTGCGCTCTGACGATCCCCGGAGCACGTGG +
Preference number: 6 (lower is better)
Translates to: HSGCEPLHEPLA*QVRSDDPRSTW
Trigger: CCACGTGCTCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCGGCTCGCAGCCTGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CGATGGCCCCCACCGAGAAGTCACTGCCCAGCCTCTTaGCATAGCGGGGTTCCGGCACAGAGCTGCACTGCG +
Preference number: 6 (lower is better)
Translates to: RWPPPRSHCPAS*HSGVPAQSCTA
Trigger: CGCAGTGCAGCTCTGTGCCGGAACCCCGCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGGGGGCCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp GCTGCGAGCCGCTCCACGAGCCATTGGCTTGACAGGTaGGCTCTGACGATCCCCGGAGCACGTGGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: AASRSTSHWLDR*ALTIPGARGQL
Trigger: AAGCTGGCCACGTGCTCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCGGCTCGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp TTGCCTGTCCAGCTGCCATCCGCCTTGCAGGTGCGGTaGTCGGAGCCACCCTTGAGGGAGAAGCCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LPVQLPSALQVR*SEPPLREKPSW
Trigger: CCAGGAGGGCTTCTCCCTCAAGGGTGGCTCCGAGCACCGCACCTGCAAGGCGGATGGCAGCTGGACAGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TTGGGGGAGGTGATGATGCCCGAGGGGCCTCGAAGGTaGGCATCACACATGCGGGCTCGGCAGACTGGCCTG +
Preference number: 6 (lower is better)
Translates to: LGEVMMPEGPRR*ASHMRARQTGL
Trigger: CAGGCCAGTCTGCCGAGCCCGCATGTGTGATGCCCACCTTCGAGGCCCCTCGGGCATCATCACCTCCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GGAGGGCAAATCCAGGGCCCCGACGTTGGCATGCGTTaGCGTCTCTGGCTGCCTGCAGTGGTGGGGGACACA +
Preference number: 6 (lower is better)
Translates to: GGQIQGPDVGMR*RLWLPAVVGDT
Trigger: TGTGTCCCCCACCACTGCAGGCAGCCAGAGACGCCAACGCATGCCAACGTCGGGGCCCTGGATTTGCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp TGCCCTCAACTTCGTAGCCCCCGTGGCAGTAGTAGGTaGCGGAGGAGCCCAGCTTCAGGTCGGACCCCACCC +
Preference number: 6 (lower is better)
Translates to: CPQLRSPRGSSR*RRSPASGRTPP
Trigger: GGGTGGGGTCCGACCTGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACGGGGGCTACGAAGTTGAGGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GAGGTTGCCTCCACACGGCACCACACACGTGGGCGCTaGGACATTCCATTGGGCCAAGGCCCCAGGCACAGG +
Preference number: 6 (lower is better)
Translates to: EVASTRHHTRGR*DIPLGQGPRHR
Trigger: CCTGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTGGTGCCGTGTGGAGGCAACCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GCCGCTCCACGAGCCATTGGCTTGACAGGTGCGCTCTaGCGATCCCCGGAGCACGTGGCCAGCTTCACAGCT +
Preference number: 6 (lower is better)
Translates to: AAPRAIGLTGAL*RSPEHVASFTA
Trigger: AGCTGTGAAGCTGGCCACGTGCTCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GCAGCTCTCCGGTCCAGGACCCATTTCCCTCACAGGTaGACACCGCGGGCAGGGAGAGCTGGTACCCCTCCA +
Preference number: 6 (lower is better)
Translates to: AALRSRTHFPHR*TPRAGRAGTPP
Trigger: TGGAGGGGTACCAGCTCTCCCTGCCCGCGGTGTTCACCTGTGAGGGAAATGGGTCCTGGACCGGAGAGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CCTTGTAGAAGCCAGGCCAGCCCGGAGAGAGGATGGTaGCGCTGGGCGAAGTCAGGTGACCACCACAGGGAG +
Preference number: 6 (lower is better)
Translates to: PCRSQASPERGW*RWAKSGDHHRE
Trigger: CTCCCTGTGGTGGTCACCTGACTTCGCCCAGCGGCACCATCCTCTCTCCGGGCTGGCCTGGCTTCTACAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp AGGTGTCGCCCACGCCAAACTGCAAGCCCTTCCGGATaGTGTAGGCTGGGACCTCGGGCTCCTCACAGGGCT +
Preference number: 6 (lower is better)
Translates to: RCRPRQTASPSG*CRLGPRAPHRA
Trigger: AGCCCTGTGAGGAGCCCGAGGTCCCAGCCTACAGCATCCGGAAGGGCTTGCAGTTTGGCGTGGGCGACACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CCAGCCTCTTGCCATAGCGGGGTTCCGGCACAGAGCTaGACTGCGTGGCGCTGGTTCGAGGAACCGCTTGGT +
Preference number: 6 (lower is better)
Translates to: PASCHSGVPAQS*TAWRWFEEPLG
Trigger: ACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTGTGCCGGAACCCCGCTATGGCAAGAGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CAGTCGCAGCCAGTTCTTGCTGCTGATAACGGGGGCTaGGAGGCTGGCTCCGGTGAACCAGAGGGAGGAGCC +
Preference number: 6 (lower is better)
Translates to: QSQPVLAADNGG*EAGSGEPEGGA
Trigger: GGCTCCTCCCTCTGGTTCACCGGAGCCAGCCTCCCAGCCCCCGTTATCAGCAGCAAGAACTGGCTGCGACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp AGAAGCCAGGCCAGCCCGGAGAGAGGATGGTGCCGCTaGGCGAAGTCAGGTGACCACCACAGGGAGCTTCAC +
Preference number: 6 (lower is better)
Translates to: RSQASPERGWCR*AKSGDHHRELH
Trigger: GTGAAGCTCCCTGTGGTGGTCACCTGACTTCGCCCAGCGGCACCATCCTCTCTCCGGGCTGGCCTGGCTTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TGGCCAATGGGCACGGTGATCAGCCAGACACAGTCCTaGGAGCTGGAGTACGGGCTAGGGAACCCCGGGGAG +
Preference number: 6 (lower is better)
Translates to: WPMGTVISQTQS*ELEYGLGNPGE
Trigger: CTCCCCGGGGTTCCCTAGCCCGTACTCCAGCTCCCAGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CCGGCGTTGCAGCCAAAGTGGATGGAGCCCCCGGGCTaGGTGCTGGTCTGGCCTAGGATGAAGCCATGGAGT +
Preference number: 6 (lower is better)
Translates to: PALQPKWMEPPG*VLVWPRMKPWS
Trigger: ACTCCATGGCTTCATCCTAGGCCAGACCAGCACCCAGCCCGGGGGCTCCATCCACTTTGGCTGCAACGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CTCCACACTCAGGCTGCGAGCCGCTCCACGAGCCATTaGCTTGACAGGTGCGCTCTGACGATCCCCGGAGCA +
Preference number: 6 (lower is better)
Translates to: LHTQAASRSTSH*LDRCALTIPGA
Trigger: TGCTCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCGGCTCGCAGCCTGAGTGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp TGTAGCCCATGGAGGGCAAATCCAGGGCCCCGACGTTGGCATGCGTaGGCGTCTCTGGCTGCCTGCAGTGGTGGGGGACACAGTCAGGTG +
Preference number: 6 (lower is better)
Translates to: CSPWRANPGPRRWHA*ASLAACSGGGHSQV
Trigger: CACCTGACTGTGTCCCCCACCACTGCAGGCAGCCAGAGACGCCAACGCATGCCAACGTCGGGGCCCTGGATTTGCCCTCCATGGGCTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CGTGGTTGCACCGGTAAGACACAGTGGTGCCGAAGCTaGACCTGTGCGGGCCGCTGGCGTGGACCTGACGAA +
Preference number: 6 (lower is better)
Translates to: RGCTGKTQWCRS*TCAGRWRGPDE
Trigger: TTCGTCAGGTCCACGCCAGCGGCCCGCACAGGTTCAGCTTCGGCACCACTGTGTCTTACCGGTGCAACCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS GCA 72 bp ACCGTGGTGAAACCGGGAGCCTTCCCTCCGGCCATATaGAGGTATGCCAGGGTCACCGCAACTGCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: TVVKPGAFPPAI*RYARVTATALL
Trigger: GAGCAGGGCAGTTGCGGTGACCCTGGCATACCTGCATATGGCCGGAGGGAAGGCTCCCGGTTTCACCACGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000338325.1
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp GCGCTGATGGGAGCTGGCAGCCGAGATCCAGTTAGCTaGCTCAGGGGCTGGGTGAAGCTGCCGTTCTCAGTG +
Preference number: 6 (lower is better)
Translates to: ALMGAGSRDPVS*LRGWVKLPFSV
Trigger: CACTGAGAACGGCAGCTTCACCCAGCCCCTGAGGCAGCTAACTGGATCTCGGCTGCCAGCTCCCATCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp ATTCGAAGCGGACGATGGCCCCCACCGAGAAGTCACTaGCCAGCCTCTTGCCATAGCGGGGTTCCGGCACAG +
Preference number: 6 (lower is better)
Translates to: IRSGRWPPPRSH*PASCHSGVPAQ
Trigger: CTGTGCCGGAACCCCGCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CGATCTCTGGCGACCCCTGCAGGGCATAGCCGGAGTTaGATTCGAAGCGGACGATGGCCCCCACCGAGAAGT +
Preference number: 6 (lower is better)
Translates to: RSLATPAGHSRS*IRSGRWPPPRS
Trigger: ACTTCTCGGTGGGGGCCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCCTGCAGGGGTCGCCAGAGATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp GAGGAGGGTAGTTCCATCGCCGCACTGTTCCGGGCATaGAGGAGATGTGGGCGTGGCCCTGGAGGGCATATC +
Preference number: 6 (lower is better)
Translates to: EEGSSIAALFRA*RRCGRGPGGHI
Trigger: GATATGCCCTCCAGGGCCACGCCCACATCTCCTGCATGCCCGGAACAGTGCGGCGATGGAACTACCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CATCCTTGTAGAAGCCAGGCCAGCCCGGAGAGAGGATaGTGCCGCTGGGCGAAGTCAGGTGACCACCACAGG +
Preference number: 6 (lower is better)
Translates to: HPCRSQASPERG*CRWAKSGDHHR
Trigger: CCTGTGGTGGTCACCTGACTTCGCCCAGCGGCACCATCCTCTCTCCGGGCTGGCCTGGCTTCTACAAGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CAGAGAGCTTCACAACTGGGCAGGGCCCGGCTCCACTaGAAGTTGGGCTCACACTCCAGAGGCTCCCCGTCA +
Preference number: 6 (lower is better)
Translates to: QRASQLGRARLH*KLGSHSRGSPS
Trigger: TGACGGGGAGCCTCTGGAGTGTGAGCCCAACTTCCAGTGGAGCCGGGCCCTGCCCAGTTGTGAAGCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GCAGGGCATAGCCGGAGTTGCATTCGAAGCGGACGATaGCCCCCACCGAGAAGTCACTGCCCAGCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: AGHSRSCIRSGR*PPPRSHCPASC
Trigger: GCAAGAGGCTGGGCAGTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GGCAGCATGTCACTCCATTGCCCGCTGGCCAGGCATTaGGACCTAGCAGCCCCCTCAGCCATATACCCAGGG +
Preference number: 6 (lower is better)
Translates to: GSMSLHCPLARH*DLAAPSAIYPG
Trigger: CCCTGGGTATATGGCTGAGGGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS CAA 72 bp GGGCAGCATGTCACTCCATTGCCCGCTGGCCAGGCATaGGGACCTAGCAGCCCCCTCAGCCATATACCCAGG +
Preference number: 6 (lower is better)
Translates to: GQHVTPLPAGQA*GPSSPLSHIPR
Trigger: CCTGGGTATATGGCTGAGGGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS CAA 90 bp TGCCGGTGGTTGCCATCCGATGTGAAGTGCAGTCGCAGCCAGTTCTaGCTGCTGATAACGGGGGCTGGGAGGCTGGCTCCGGTGAACCAG +
Preference number: 6 (lower is better)
Translates to: CRWLPSDVKCSRSQF*LLITGAGRLAPVNQ
Trigger: CTGGTTCACCGGAGCCAGCCTCCCAGCCCCCGTTATCAGCAGCAAGAACTGGCTGCGACTGCACTTCACATCGGATGGCAACCACCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp GGAGGGAGCCAGTCCAGTGTCCATCCAGCCCACACATaGGGGTGCTGTTTCCCACCAGAGTACGCTTGCCGA +
Preference number: 6 (lower is better)
Translates to: GGSQSSVHPAHT*GCCFPPEYACR
Trigger: TCGGCAAGCGTACTCTGGTGGGAAACAGCACCCGCATGTGTGGGCTGGATGGACACTGGACTGGCTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CACGCCAAACTGCAAGCCCTTCCGGATGCTGTAGGCTaGGACCTCGGGCTCCTCACAGGGCTCCAAGTCGTA +
Preference number: 6 (lower is better)
Translates to: HAKLQALPDAVG*DLGLLTGLQVV
Trigger: TACGACTTGGAGCCCTGTGAGGAGCCCGAGGTCCCAGCCTACAGCATCCGGAAGGGCTTGCAGTTTGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TCTGTCTGCAGCAGGCTGAGGTTGAGGCGGACGCCATaGCCAATGGGCACGGTGATCAGCCAGACACAGTCC +
Preference number: 6 (lower is better)
Translates to: SVCSRLRLRRTP*PMGTVISQTQS
Trigger: GGACTGTGTCTGGCTGATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCAGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS CCA 72 bp CAGCTGGGCTGGGTGCCACTCCATGTCCCATCTGACTaGCAAAACCTGCGTGGAGAGCCCACCAGCACCAGA +
Preference number: 6 (lower is better)
Translates to: QLGWVPLHVPSD*QNLRGEPTSTR
Trigger: TCTGGTGCTGGTGGGCTCTCCACGCAGGTTTTGCCAGTCAGATGGGACATGGAGTGGCACCCAGCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GTATCCCAAACTGTGGCACACCAGGGTCCGCACACGTaGTCAGGGTCGGATCTATGCAGCTGGGCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: VSQTVAHQGPHT*SGSDLCSWAGC
Trigger: GCACCCAGCCCAGCTGCATAGATCCGACCCTGACCACGTGTGCGGACCCTGGTGTGCCACAGTTTGGGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp TCTGCAGGTGGGCAGCATGTCACTCCATTGCCCGCTGGCCAGGCATaGGGACCTAGCAGCCCCCTCAGCCATATACCCAGGGTTGCAAAC +
Preference number: 6 (lower is better)
Translates to: SAGGQHVTPLPAGQA*GPSSPLSHIPRVAN
Trigger: GTTTGCAACCCTGGGTATATGGCTGAGGGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCCCACCTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS TCA 72 bp GCGGGCTGGCACTCAAACTTGAGTGTGTCACCGTGGTaGAACCGGGAGCCTTCCCTCCGGCCATATGCAGGT +
Preference number: 6 (lower is better)
Translates to: AGWHSNLSVSPW*NREPSLRPYAG
Trigger: ACCTGCATATGGCCGGAGGGAAGGCTCCCGGTTTCACCACGGTGACACACTCAAGTTTGAGTGCCAGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000338325.1
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp AACCTGGGTCCCGTGGTAAACCCCGATCAAGGGCGCTaGGTAAGTCCGCCCATCGCGTACTTCCAGGGTGTC +
Preference number: 6 (lower is better)
Translates to: NLGPVVNPDQGR*VSPPIAYFQGV
Trigger: GACACCCTGGAAGTACGCGATGGGCGGACTTACTCAGCGCCCTTGATCGGGGTTTACCACGGGACCCAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GCTGGCTGTGGCCGTCGTGAACCTCCACCACGTCGTTaGGGGCCGTGTGAAAGAAGGCGAACTGGCCAAACA +
Preference number: 6 (lower is better)
Translates to: AGCGRREPPPRR*GPCERRRTGQT
Trigger: TGTTTGGCCAGTTCGCCTTCTTTCACACGGCCCTCAACGACGTGGTGGAGGTTCACGACGGCCACAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CTGACGATCCCCGGAGCACGTGGCCAGCTTCACAGCTaGAGCGCATCACAGTGCCTGGATCAAAGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: LTIPGARGQLHS*SASQCLDQSCP
Trigger: GGGACAGCTTTGATCCAGGCACTGTGATGCGCTTCAGCTGTGAAGCTGGCCACGTGCTCCGGGGATCGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp TATGCAGCTGGGCTGGGTGCCACTCCATGTCCCATCTaGCTGGCAAAACCTGCGTGGAGAGCCCACCAGCAC +
Preference number: 6 (lower is better)
Translates to: YAAGLGATPCPI*LAKPAWRAHQH
Trigger: GTGCTGGTGGGCTCTCCACGCAGGTTTTGCCAGTCAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GAGGGCGATGAAAGGCACCAGGATCGCGGCTGCCACTaGGCTGCTGTTGGAAGCAAAGTGGCGGCCAATGGA +
Preference number: 6 (lower is better)
Translates to: EGDERHQDRGCH*AAVGSKVAANG
Trigger: TCCATTGGCCGCCACTTTGCTTCCAACAGCAGCTCAGTGGCAGCCGCGATCCTGGTGCCTTTCATCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CCGGCTTCCCAACTGTCACCACTCCGACTCCCATTCTaGGGGATCCCAGGGTCATTGCAGGACGTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: PASQLSPLRLPF*GIPGSLQDVAV
Trigger: CACAGCAACGTCCTGCAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAGTGGTGACAGTTGGGAAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CATCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTGCTaGTTTCAATGCGGCCTGGGAGCTGGGAGCCATAGA +
Preference number: 6 (lower is better)
Translates to: HRCGRRGRGCCC*FQCGLGAGSHR
Trigger: TCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp ATGCATCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTaGTGCTTTCAATGCGGCCTGGGAGCTGGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: MHRCGRRGRGCC*CFQCGLGAGSH
Trigger: ATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGATGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CTTGGCCATGCTCCGGGTGAAGACGCCGAGCCGTGGTaGTGTTTGCTGTGGCCCATCCCAGATGGTGATGAA +
Preference number: 6 (lower is better)
Translates to: LGHAPGEDAEPW*CLLWPIPDGDE
Trigger: TTCATCACCATCTGGGATGGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS GCA 72 bp GGGTCTTGCCCGACCAGTGATGATCCTGCTGGCAGATaGGCACAGACATGCCGATCAGGCGGAAGCCAGCAT +
Preference number: 6 (lower is better)
Translates to: GSCPTSDDPAGR*AQTCRSGGSQH
Trigger: ATGCTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGTCGGGCAAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS GCA 72 bp CACACATGCGGGTGCTGTTTCCCACCAGAGTACGCTTaGCGATGCAGCTGTACCGCACCACTGCTCCCACAG +
Preference number: 6 (lower is better)
Translates to: HTCGCCFPPEYA*RCSCTAPLLPQ
Trigger: CTGTGGGAGCAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGGGAAACAGCACCCGCATGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp AGCCAGTCCAGTGTCCATCCAGCCCACACATGCGGGTaGTGTTTCCCACCAGAGTACGCTTGCCGATGCAGC +
Preference number: 6 (lower is better)
Translates to: SQSSVHPAHTCG*CFPPEYACRCS
Trigger: GCTGCATCGGCAAGCGTACTCTGGTGGGAAACAGCACCCGCATGTGTGGGCTGGATGGACACTGGACTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp TGCCTCTCAGTGAAGACCCTGGCGTGGCCTCCTCCCTaGTCACTTACACACGCAGCCTGGCTTCTTAGCCGA +
Preference number: 6 (lower is better)
Translates to: CLSVKTLAWPPP*SLTHAAWLLSR
Trigger: TCGGCTAAGAAGCCAGGCTGCGTGTGTAAGTGAGCAGGGAGGAGGCCACGCCAGGGTCTTCACTGAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS GCA 72 bp TTGATGATTCTGCAGGTGGGCAGCATGTCACTCCATTaGCCGCTGGCCAGGCATTGGGACCTAGCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: LMILQVGSMSLH*PLARHWDLAAP
Trigger: GGGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCCCACCTGCAGAATCATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS CCA 72 bp CTTCACAACTGGGCAGGGCCCGGCTCCACTGGAAGTTaGGCTCACACTCCAGAGGCTCCCCGTCACTTAATG +
Preference number: 6 (lower is better)
Translates to: LHNWAGPGSTGS*AHTPEAPRHLM
Trigger: CATTAAGTGACGGGGAGCCTCTGGAGTGTGAGCCCAACTTCCAGTGGAGCCGGGCCCTGCCCAGTTGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TCACCAAGTAGCGCTCGCCAGTCTTCACCCCGTTACTaGGCACAGCAGGTTCCGGACAACTGCTCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: SPSSARQSSPRY*AQQVPDNCSGP
Trigger: TGGGCCTGAGCAGTTGTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAGACTGGCGAGCGCTACTTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TTGGGGGAGGTGATGATGCCCGAGGGGCCTCGAAGGTaGGCATCACACATGCGGGCTTTGCAAAGAGGACCT +
Preference number: 6 (lower is better)
Translates to: LGEVMMPEGPRR*ASHMRALQRGP
Trigger: AGGTCCTCTTTGCAAAGCCCGCATGTGTGATGCCCACCTTCGAGGCCCCTCGGGCATCATCACCTCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS CAA 72 bp ATGGAGCTGCCCAGCTGGAGGCTGTCCCCAAACCGTTaGCCATTTACTGGAACGCCAGGATCCGGGCACTCG +
Preference number: 6 (lower is better)
Translates to: MELPSWRLSPNR*PFTGTPGSGHS
Trigger: CGAGTGCCCGGATCCTGGCGTTCCAGTAAATGGCAAACGGTTTGGGGACAGCCTCCAGCTGGGCAGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp CCCAGCTTCAGGTCGGACCCCACCCGTGTGCCGTTCTaGATGGAACCAGGATCAAAACATGACTCCCGCGGG +
Preference number: 6 (lower is better)
Translates to: PSFRSDPTRVPF*MEPGSKHDSRG
Trigger: CCCGCGGGAGTCATGTTTTGATCCTGGTTCCATCAAGAACGGCACACGGGTGGGGTCCGACCTGAAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp AAATCTCCAGAGGGCTCTGTCTGCAGCAGGCTGAGGTaGAGGCGGACGCCATGGCCAATGGGCACGGTGATC +
Preference number: 6 (lower is better)
Translates to: KSPEGSVCSRLR*RRTPWPMGTVI
Trigger: GATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCTGGAGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS CAA 72 bp CCACACATGCGGGTGCTGTTTCCCACCAGAGTACGCTaGCCGATGCAGCTGTACCGCACCACTGCTCCCACA +
Preference number: 6 (lower is better)
Translates to: PHMRVLFPTRVR*PMQLYRTTAPT
Trigger: TGTGGGAGCAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTCTGGTGGGAAACAGCACCCGCATGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp GTTGATGATTCTGCAGGTGGGCAGCATGTCACTCCATaGCCCGCTGGCCAGGCATTGGGACCTAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: VDDSAGGQHVTP*PAGQALGPSSP
Trigger: GGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCCCACCTGCAGAATCATCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS CAA 90 bp GAGCTGGAGTACGGGCTAGGGAACCCCGGGGAGTACACAGTGCCGTaGGAAGAAGTGATGTTCCCGCCACAAGGGACTTCACACTTGGGC +
Preference number: 6 (lower is better)
Translates to: ELEYGLGNPGEYTVP*EEVMFPPQGTSHLG
Trigger: GCCCAAGTGTGAAGTCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCACTGTGTACTCCCCGGGGTTCCCTAGCCCGTACTCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CACGCTGCCCTCCTTCAGGACGCAGGTGATGGTCTCTaGGCCCTGAGTCCCAAGGAAGCCTTCATCACAGAG +
Preference number: 6 (lower is better)
Translates to: HAALLQDAGDGL*ALSPKEAFITE
Trigger: CTCTGTGATGAAGGCTTCCTTGGGACTCAGGGCTCAGAGACCATCACCTGCGTCCTGAAGGAGGGCAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CTGGCGGGTAGGGTTCTGGGTAATTTGGTGAGAGGATaGCTCCAGATGGTCCTGTCAGGTCTCCCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: LAGRVLGNLVRG*LQMVLSGLPRR
Trigger: CCTGCGGGGGAGACCTGACAGGACCATCTGGAGTCATCCTCTCACCAAATTACCCAGAACCCTACCCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GGTGGTCCCAGTTCCGGTTGGTGCCATGTTGACACGTaGGGACAGGGTGGCCAGTCAATTGATACCCCGGGA +
Preference number: 6 (lower is better)
Translates to: GGPSSGWCHVDT*GQGGQSIDTPG
Trigger: TCCCGGGGTATCAATTGACTGGCCACCCTGTCCTCACGTGTCAACATGGCACCAACCGGAACTGGGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp AATCCGCGCTGCCGGTGGTTGCCATCCGATGTGAAGTaGAGTCGCAGCCAGTTCTTGCTGCTGATAACGGGG +
Preference number: 6 (lower is better)
Translates to: NPRCRWLPSDVK*SRSQFLLLITG
Trigger: CCCCGTTATCAGCAGCAAGAACTGGCTGCGACTGCACTTCACATCGGATGGCAACCACCGGCAGCGCGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp ACGTGGTCAGGGTCGGATCTATGCAGCTGGGCTGGGTaGCACTCCATGTCCCATCTGACTGGCAAAACCTGC +
Preference number: 6 (lower is better)
Translates to: TWSGSDLCSWAG*HSMSHLTGKTC
Trigger: GCAGGTTTTGCCAGTCAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCATAGATCCGACCCTGACCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CGGACCTTGTCACCGAGGTTGAAGGTTGAACCCTGCTaGATGCCATTGGGCAGCCTCCCTGGGTTCCCACAT +
Preference number: 6 (lower is better)
Translates to: RTLSPRLKVEPC*MPLGSLPGFPH
Trigger: ATGTGGGAACCCAGGGAGGCTGCCCAATGGCATCCAGCAGGGTTCAACCTTCAACCTCGGTGACAAGGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TGGGAGTGGTCGCTGTGGAAATACACGGTGGTCTCGTaGGACGTGGAGAGGAGGGAGCTTGGAAGCTCGCTT +
Preference number: 6 (lower is better)
Translates to: WEWSLWKYTVVS*DVERRELGSSL
Trigger: AAGCGAGCTTCCAAGCTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTATTTCCACAGCGACCACTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GCCGATTCTGGGAGTGGTCGCTGTGGAAATACACGGTaGTCTCGTGGGACGTGGAGAGGAGGGAGCTTGGAA +
Preference number: 6 (lower is better)
Translates to: ADSGSGRCGNTR*SRGTWRGGSLE
Trigger: TTCCAAGCTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTATTTCCACAGCGACCACTCCCAGAATCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TTTCTTGGCCATGCTCCGGGTGAAGACGCCGAGCCGTaGTGCTGTTTGCTGTGGCCCATCCCAGATGGTGAT +
Preference number: 6 (lower is better)
Translates to: FLGHAPGEDAEP*CCLLWPIPDGD
Trigger: ATCACCATCTGGGATGGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS CCA 72 bp AGACCCCACCACCTTCCCATTGGGGATGAGCGGAGGTaGCTTGCACATGAGAGCTTTGCAGACGGGCTTGGT +
Preference number: 6 (lower is better)
Translates to: RPHHLPIGDERR*LAHESFADGLG
Trigger: ACCAAGCCCGTCTGCAAAGCTCTCATGTGCAAGCCACCTCCGCTCATCCCCAATGGGAAGGTGGTGGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GCACACGTGGTCAGGGTCGGATCTATGCAGCTGGGCTaGGTGCCACTCCATGTCCCATCTGACTGGCAAAAC +
Preference number: 6 (lower is better)
Translates to: AHVVRVGSMQLG*VPLHVPSDWQN
Trigger: GTTTTGCCAGTCAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCATAGATCCGACCCTGACCACGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp AAAAACATCCCCAGGAATCAAGGCTTGGGTGAGCGGTaGCTCCCGGGCAGTGTTGATGGGTCTCCCACTGGG +
Preference number: 6 (lower is better)
Translates to: KNIPRNQGLGER*LPGSVDGSPTG
Trigger: CCCAGTGGGAGACCCATCAACACTGCCCGGGAGCCACCGCTCACCCAAGCCTTGATTCCTGGGGATGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TTGGGGGAGGTGATGATGCCCGAGGGGCCTCGAAGGTaGGCATCACACATGCGGGATTCTTTGGCTTCAGTG +
Preference number: 6 (lower is better)
Translates to: LGEVMMPEGPRR*ASHMRDSLASV
Trigger: CACTGAAGCCAAAGAATCCCGCATGTGTGATGCCCACCTTCGAGGCCCCTCGGGCATCATCACCTCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471438.2
CDS CAA 72 bp GTGGCTGGGGAGAACTTCATAGGTGGCGTGGAAGCCTaGGGCACTGACTGCATAGTCGCTGATGAGGCGCAG +
Preference number: 6 (lower is better)
Translates to: VAGENFIGGVEA*GTDCIVADEAQ
Trigger: CTGCGCCTCATCAGCGACTATGCAGTCAGTGCCCAAGGCTTCCACGCCACCTATGAAGTTCTCCCCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp GTGAAGAAGTCAGTGCTGAACTGCAGGACGACCGAGTaGAAGGTGCTATGCAGGTCCTTGGGCAGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: VKKSVLNCRTTE*KVLCRSLGRAG
Trigger: CCCGGCCCTGCCCAAGGACCTGCATAGCACCTTCAACTCGGTCGTCCTGCAGTTCAGCACTGACTTCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp CATGCTCCGGGTGAAGACGCCGAGCCGTGGTGCTGTTaGCTGTGGCCCATCCCAGATGGTGATGAAATCTCC +
Preference number: 6 (lower is better)
Translates to: HAPGEDAEPWCC*LWPIPDGDEIS
Trigger: GGAGATTTCATCACCATCTGGGATGGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS CAA 90 bp ATGGTGATGAAATCTCCAGAGGGCTCTGTCTGCAGCAGGCTGAGGTaGAGGCGGACGCCATGGCCAATGGGCACGGTGATCAGCCAGACA +
Preference number: 6 (lower is better)
Translates to: MVMKSPEGSVCSRLR*RRTPWPMGTVISQT
Trigger: TGTCTGGCTGATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCTGGAGATTTCATCACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS CAA 90 bp TGGAGCCCACCAGTGTGTATCCGGAATTGCAGGAGAAGATGGCTGTaGCCCCGTAGACAGACAGTGTTCCGATGCGGTGGCCATTGGGGG +
Preference number: 6 (lower is better)
Translates to: WSPPVCIRNCRRRWL*PRRQTVFRCGGHWG
Trigger: CCCCCAATGGCCACCGCATCGGAACACTGTCTGTCTACGGGGCAACAGCCATCTTCTCCTGCAATTCCGGATACACACTGGTGGGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS CAA 90 bp CAGCAGCCTGAGGTCCAGTCTTTGAAAGCCGAACTGCCCAAAGCCTaGGCCCTTGACAGAGCCTTGGTAGATGAAGGTGGCTCCGGAGGA +
Preference number: 6 (lower is better)
Translates to: QQPEVQSLKAELPKA*ALDRALVDEGGSGG
Trigger: TCCTCCGGAGCCACCTTCATCTACCAAGGCTCTGTCAAGGGCCAAGGCTTTGGGCAGTTCGGCTTTCAAAGACTGGACCTCAGGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp ATCTGTACAGTTGATGATTCTGCAGGTGGGCAGCATGTCACTCCATaGCCCGCTGGCCAGGCATTGGGACCTAGCAGCCCCCTCAGCCAT +
Preference number: 6 (lower is better)
Translates to: ICTVDDSAGGQHVTP*PAGQALGPSSPLSH
Trigger: ATGGCTGAGGGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCCCACCTGCAGAATCATCAACTGTACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS TCA 72 bp GTGCAGTTCTGGCCAGCTGATCTTGGGTGGTGGCTTTaGACTTGCCATCTAGGGCCGGGGGCGATGCTTATG +
Preference number: 6 (lower is better)
Translates to: VQFWPADLGWWL*TCHLGPGAMLM
Trigger: CATAAGCATCGCCCCCGGCCCTAGATGGCAAGTTCAAAGCCACCACCCAAGATCAGCTGGCCAGAACTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241312.8
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GCTCCCCGTCACTTAATGTGTAGCCCGAGTCACAGCTaGAGGTCACCAGCGCGCCCACGTAGAAGTCATTCC +
Preference number: 6 (lower is better)
Translates to: APRHLMCSPSHS*RSPARPRRSHS
Trigger: GGAATGACTTCTACGTGGGCGCGCTGGTGACCTTCAGCTGTGACTCGGGCTACACATTAAGTGACGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CTCTCCACAGGCCCATCCCAGATGCGCAGCACGTCGTaGACCTCCTCTGTGTCAAACACCAGGAAGTGTAGC +
Preference number: 6 (lower is better)
Translates to: LSTGPSQMRSTS*TSSVSNTRKCS
Trigger: GCTACACTTCCTGGTGTTTGACACAGAGGAGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTGTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp ACGTGGAGAGGAGGGAGCTTGGAAGCTCGCTTCCACTaGATCTTCCCATCATGCGGCTGGTCTCATAGGGGC +
Preference number: 6 (lower is better)
Translates to: TWRGGSLEARFH*IFPSCGWSHRG
Trigger: GCCCCTATGAGACCAGCCGCATGATGGGAAGATTCAGTGGAAGCGAGCTTCCAAGCTCCCTCCTCTCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GGAACCCCGGGGAGTACACAGTGCCGTTGGAAGAAGTaGTGTTCCCGCCACAAGGGACTTCACACTTGGGCA +
Preference number: 6 (lower is better)
Translates to: GTPGSTQCRWKK*CSRHKGLHTWA
Trigger: TGCCCAAGTGTGAAGTCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCACTGTGTACTCCCCGGGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp ATGAACTCTGCACTGTTTTCTTGGCCATGCTCCGGGTaGAGACGCCGAGCCGTGGTGCTGTTTGCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: MNSALFSWPCSG*RRRAVVLFAVA
Trigger: GGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAGAAAACAGTGCAGAGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS TCA 72 bp CCCCGAGGCTCCATTTGCCATTGGCCTGACAGCGGATaGCCCTTTGGCCAGTATAGTAGTAGCCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: PRGSICHWPDSG*PFGQYSSSQGH
Trigger: GTGACCCTGGCTACTACTATACTGGCCAAAGGGTCATCCGCTGTCAGGCCAATGGCAAATGGAGCCTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS GCA 72 bp AGGGCAAAGGACTGGAACACAAGCTGGATTCTGTGCTaGTCTTCCGCGGTGATGGTCCACGTGCAGTTGGCG +
Preference number: 6 (lower is better)
Translates to: RAKDWNTSWILC*SSAVMVHVQLA
Trigger: CGCCAACTGCACGTGGACCATCACCGCGGAAGAGCAGCACAGAATCCAGCTTGTGTTCCAGTCCTTTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp TCACCCCGTTACTGGGCACAGCAGGTTCCGGACAACTaGTCAGGCCCACCGTTTTGTACTCCAAGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: SPRYWAQQVPDN*SGPPFCTPSGS
Trigger: GCTTCCACTTGGAGTACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTGCTGTGCCCAGTAACGGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CACGCACCCTGGAGCCCACCAGTGTGTATCCGGAATTaGAGGAGAAGATGGCTGTTGCCCCGTAGACAGACA +
Preference number: 6 (lower is better)
Translates to: HAPWSPPVCIRN*RRRWLLPRRQT
Trigger: TGTCTGTCTACGGGGCAACAGCCATCTTCTCCTGCAATTCCGGATACACACTGGTGGGCTCCAGGGTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS GCA 72 bp TGCGCACAGACATGCCGATCAGGCGGAAGCCAGCATTaGATTGGTACACCACACTGCCCCGGTAGCTGTAGT +
Preference number: 6 (lower is better)
Translates to: CAQTCRSGGSQH*IGTPHCPGSCS
Trigger: ACTACAGCTACCGGGGCAGTGTGGTGTACCAATGCAATGCTGGCTTCCGCCTGATCGGCATGTCTGTGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS CCA 72 bp TTGACTTGGTATTGGGCACTGAATCCGCGCTGCCGGTaGTTGCCATCCGATGTGAAGTGCAGTCGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LTWYWALNPRCR*LPSDVKCSRSQ
Trigger: CTGGCTGCGACTGCACTTCACATCGGATGGCAACCACCGGCAGCGCGGATTCAGTGCCCAATACCAAGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CAGCTGGAGGCTGTCCCCAAACCGTTTGCCATTTACTaGAACGCCAGGATCCGGGCACTCGTTGTGTCGGAA +
Preference number: 6 (lower is better)
Translates to: QLEAVPKPFAIY*NARIRALVVSE
Trigger: TTCCGACACAACGAGTGCCCGGATCCTGGCGTTCCAGTAAATGGCAAACGGTTTGGGGACAGCCTCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp AGCTTGAATCCTGGCCGATTCTGGGAGTGGTCGCTGTaGAAATACACGGTGGTCTCGTGGGACGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SLNPGRFWEWSL*KYTVVSWDVER
Trigger: CCTCTCCACGTCCCACGAGACCACCGTGTATTTCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GTGGCCAGCTTCACAGCTGAAGCGCATCACAGTGCCTaGATCAAAGCTGTCCCCCAAACGGATGCCATGAGC +
Preference number: 6 (lower is better)
Translates to: VASFTAEAHHSA*IKAVPQTDAMS
Trigger: GCTCATGGCATCCGTTTGGGGGACAGCTTTGATCCAGGCACTGTGATGCGCTTCAGCTGTGAAGCTGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CTGGTAGCCCTGAGAATTGTTCTGTATCCCAAACTGTaGCACACCAGGGTCCGCACACGTGGTCAGGGTCGG +
Preference number: 6 (lower is better)
Translates to: LVALRIVLYPKL*HTRVRTRGQGR
Trigger: CCGACCCTGACCACGTGTGCGGACCCTGGTGTGCCACAGTTTGGGATACAGAACAATTCTCAGGGCTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp ACTTGGTATTGGGCACTGAATCCGCGCTGCCGGTGGTaGCCATCCGATGTGAAGTGCAGTCGCAGCCAGTTC +
Preference number: 6 (lower is better)
Translates to: TWYWALNPRCRW*PSDVKCSRSQF
Trigger: GAACTGGCTGCGACTGCACTTCACATCGGATGGCAACCACCGGCAGCGCGGATTCAGTGCCCAATACCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp TACGGGCTAGGGAACCCCGGGGAGTACACAGTGCCGTaGGAAGAAGTGATGTTCCCGCCACAAGGGACTTCA +
Preference number: 6 (lower is better)
Translates to: YGLGNPGEYTVP*EEVMFPPQGTS
Trigger: TGAAGTCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCACTGTGTACTCCCCGGGGTTCCCTAGCCCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp AGCAGGACCTGGTTGGATGAACTCTGCACTGTTTTCTaGGCCATGCTCCGGGTGAAGACGCCGAGCCGTGGT +
Preference number: 6 (lower is better)
Translates to: SRTWLDELCTVF*AMLRVKTPSRG
Trigger: ACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAGAAAACAGTGCAGAGTTCATCCAACCAGGTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000489419.1
ENST00000619121.4
CDS CAA 72 bp GGAGGTGGCTTGCACATGAGAGCTTTGCAGACGGGCTaGGTTCCATTCCATGTCCGGTCCTTGGTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: GGGLHMRALQTG*VPFHVRSLVQL
Trigger: GAGCTGCACCAAGGACCGGACATGGAATGGAACCAAGCCCGTCTGCAAAGCTCTCATGTGCAAGCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp TCCGCCTCGCTGGCCATGATGTCTGTGGGCTGGATGTaGCGGTCGTACATTGGGTTCTCAAATGTGGCCCGA +
Preference number: 6 (lower is better)
Translates to: SASLAMMSVGWM*RSYIGFSNVAR
Trigger: TCGGGCCACATTTGAGAACCCAATGTACGACCGCAACATCCAGCCCACAGACATCATGGCCAGCGAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp TGCTTCTTGACTTGGTATTGGGCACTGAATCCGCGCTGCCGGTGGTaGCCATCCGATGTGAAGTGCAGTCGCAGCCAGTTCTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: CFLTWYWALNPRCRW*PSDVKCSRSQFLLL
Trigger: CAGCAGCAAGAACTGGCTGCGACTGCACTTCACATCGGATGGCAACCACCGGCAGCGCGGATTCAGTGCCCAATACCAAGTCAAGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp GTCCCCGAGGCTCCATTTGCCATTGGCCTGACAGCGGATGACCCTTaGGCCAGTATAGTAGTAGCCAGGGTCACAGATGAGCATCAGCTG +
Preference number: 6 (lower is better)
Translates to: VPEAPFAIGLTADDP*ASIVVARVTDEHQL
Trigger: CAGCTGATGCTCATCTGTGACCCTGGCTACTACTATACTGGCCAAAGGGTCATCCGCTGTCAGGCCAATGGCAAATGGAGCCTCGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS CAA 90 bp AGCTCCACGCCACTGTGGTCGATCATGGTGGCATTGACCTTGCTGTaGGCAACTTGGAAGCCAGTCACTCTGAGCATGGCTGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SSTPLWSIMVALTLL*ATWKPVTLSMAGCF
Trigger: GAAGCAGCCAGCCATGCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGACCACAGTGGCGTGGAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp AAGTGCAGCTCCACGCCACTGTGGTCGATCATGGTGGCATTGACCTaGCTGTTGGCAACTTGGAAGCCAGTCACTCTGAGCATGGCTGGC +
Preference number: 6 (lower is better)
Translates to: KCSSTPLWSIMVALT*LLATWKPVTLSMAG
Trigger: GCCAGCCATGCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGACCACAGTGGCGTGGAGCTGCACTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp CCAGCCAAGTGCAGCTCCACGCCACTGTGGTCGATCATGGTGGCATaGACCTTGCTGTTGGCAACTTGGAAGCCAGTCACTCTGAGCATG +
Preference number: 6 (lower is better)
Translates to: PAKCSSTPLWSIMVA*TLLLATWKPVTLSM
Trigger: CATGCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGACCACAGTGGCGTGGAGCTGCACTTGGCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GGAACACAAGCTGGATTCTGTGCTGCTCTTCCGCGGTaGTGGTCCACGTGCAGTTGGCGTAATTGGGGTAGC +
Preference number: 6 (lower is better)
Translates to: GTQAGFCAALPR*WSTCSWRNWGS
Trigger: GCTACCCCAATTACGCCAACTGCACGTGGACCATCACCGCGGAAGAGCAGCACAGAATCCAGCTTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GCTGCCAGAAGAACCTGTTCTCGATCTTCACACAGCTaGTCTCTGCACTTCCCTGCAGCGCGTAGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: AARRTCSRSSHS*SLHFPAARSQG
Trigger: ACCCTGGCTACGCGCTGCAGGGAAGTGCAGAGATCAGCTGTGTGAAGATCGAGAACAGGTTCTTCTGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CTCCTTGCCTGGCGGGTAGGGTTCTGGGTAATTTGGTaGGAGGATGACTCCAGATGGTCCTGTCAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: LLAWRVGFWVIW*EDDSRWSCQVS
Trigger: GGAGACCTGACAGGACCATCTGGAGTCATCCTCTCACCAAATTACCCAGAACCCTACCCGCCAGGCAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GCAGCTCCACGCCACTGTGGTCGATCATGGTGGCATTaGCCTTGCTGTTGGCAACTTGGAAGCCAGTCACTC +
Preference number: 6 (lower is better)
Translates to: AAPRHCGRSWWH*PCCWQLGSQSL
Trigger: GAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGACCACAGTGGCGTGGAGCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CCGAAGCTGAACCTGTGCGGGCCGCTGGCGTGGACCTaGCGAACACTATTTTCTTGGTGTCCAGGATCTGTA +
Preference number: 6 (lower is better)
Translates to: PKLNLCGPLAWT*RTLFSWCPGSV
Trigger: TACAGATCCTGGACACCAAGAAAATAGTGTTCGTCAGGTCCACGCCAGCGGCCCGCACAGGTTCAGCTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS GCA 72 bp AACTTCATAGGTGGCGTGGAAGCCTTGGGCACTGACTaGATAGTCGCTGATGAGGCGCAGAGAGAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: NFIGGVEALGTD*IVADEAQREGG
Trigger: ACCACCCTCTCTCTGCGCCTCATCAGCGACTATGCAGTCAGTGCCCAAGGCTTCCACGCCACCTATGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp TGCTTCTTGACTTGGTATTGGGCACTGAATCCGCGCTaGCGGTGGTTGCCATCCGATGTGAAGTGCAGTCGC +
Preference number: 6 (lower is better)
Translates to: CFLTWYWALNPR*RWLPSDVKCSR
Trigger: GCGACTGCACTTCACATCGGATGGCAACCACCGGCAGCGCGGATTCAGTGCCCAATACCAAGTCAAGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CTGATTGTCCCACGTTGTAGCCAGCTCCCCTCACAATaGCATTGGCAAAGGGCTCTGGGTCTGGGCACTCTT +
Preference number: 6 (lower is better)
Translates to: LIVPRCSQLPSQ*HWQRALGLGTL
Trigger: AAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTGGGACAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CAGTGTGTATCCGGAATTGCAGGAGAAGATGGCTGTTaGCCCGTAGACAGACAGTGTTCCGATGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: QCVSGIAGEDGC*PVDRQCSDAVA
Trigger: GGCCACCGCATCGGAACACTGTCTGTCTACGGGGCAACAGCCATCTTCTCCTGCAATTCCGGATACACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS CCA 72 bp GCCTGTGAGCCTCGTACGCAGATTCTCTGGCTGGGGTaGACCATCAAACACCGACAGGACATCAAAGTCCTC +
Preference number: 6 (lower is better)
Translates to: ACEPRTQILWLG*TIKHRQDIKVL
Trigger: GAGGACTTTGATGTCCTGTCGGTGTTTGATGGTCCACCCCAGCCAGAGAATCTGCGTACGAGGCTCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CAGCTGAAAGCCTGTGAGCCTCGTACGCAGATTCTCTaGCTGGGGTGGACCATCAAACACCGACAGGACATC +
Preference number: 6 (lower is better)
Translates to: QLKACEPRTQIL*LGWTIKHRQDI
Trigger: GATGTCCTGTCGGTGTTTGATGGTCCACCCCAGCCAGAGAATCTGCGTACGAGGCTCACAGGCTTTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GAGGAAGAGGCTGTTGCTGCTGCTTTCAATGCGGCCTaGGAGCTGGGAGCCATAGAAGCTTCCTATGAGAGG +
Preference number: 6 (lower is better)
Translates to: EEEAVAAAFNAA*ELGAIEASYER
Trigger: CCTCTCATAGGAAGCTTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CTGGTTACCCTGAGTGAGGCCGTTGACAGGGTTGCCTaGGTGTCCACAGGTAATTGGCACACAGAAAGGGGT +
Preference number: 6 (lower is better)
Translates to: LVTLSEAVDRVA*VSTGNWHTERG
Trigger: ACCCCTTTCTGTGTGCCAATTACCTGTGGACACCCAGGCAACCCTGTCAACGGCCTCACTCAGGGTAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373381.9
ENST00000465819.1
ENST00000619121.4
CDS CAA 72 bp AGGGAACCCTGGCGACAAGATGGTCCCACTGGAGCCTaGAATGAAGCCACCACAGAGAGCTTCACAACTGGG +
Preference number: 6 (lower is better)
Translates to: REPWRQDGPTGA*NEATTESFTTG
Trigger: CCCAGTTGTGAAGCTCTCTGTGGTGGCTTCATTCAAGGCTCCAGTGGGACCATCTTGTCGCCAGGGTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp CCAGTGTGTATCCGGAATTGCAGGAGAAGATGGCTGTaGCCCCGTAGACAGACAGTGTTCCGATGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: PVCIRNCRRRWL*PRRQTVFRCGG
Trigger: GCCACCGCATCGGAACACTGTCTGTCTACGGGGCAACAGCCATCTTCTCCTGCAATTCCGGATACACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS CAA 90 bp CGCAAACATGTCGCTCACTTTCATACAGGTGATCCGCTTGGACCCTaGCAGGTCATAGCCCTCGTTGCAGGTGAACTGGACGCTGGATCC +
Preference number: 6 (lower is better)
Translates to: RKHVAHFHTGDPLGP*QVIALVAGELDAGS
Trigger: GGATCCAGCGTCCAGTTCACCTGCAACGAGGGCTATGACCTGCAAGGGTCCAAGCGGATCACCTGTATGAAAGTGAGCGACATGTTTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp CCTTCACTGCAGCTGTACATGGCCTTGGTTCCCACTGTGTACTCCTaGCCAAACACCATTCCATTCTTGGGGGCCTCAGGAAGCCCACAG +
Preference number: 6 (lower is better)
Translates to: PSLQLYMALVPTVYS*PNTIPFLGASGSPQ
Trigger: CTGTGGGCTTCCTGAGGCCCCCAAGAATGGAATGGTGTTTGGCAAGGAGTACACAGTGGGAACCAAGGCCATGTACAGCTGCAGTGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp ACTGTGAACTCCGCCTCGCTGGCCATGATGTCTGTGGGCTGGATGTaGCGGTCGTACATTGGGTTCTCAAATGTGGCCCGAACATTGGTG +
Preference number: 6 (lower is better)
Translates to: TVNSASLAMMSVGWM*RSYIGFSNVARTLV
Trigger: CACCAATGTTCGGGCCACATTTGAGAACCCAATGTACGACCGCAACATCCAGCCCACAGACATCATGGCCAGCGAGGCGGAGTTCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp GAACCTGTGCGGGCCGCTGGCGTGGACCTGACGAACACTATTTTCTaGGTGTCCAGGATCTGTACAGTTGATGATTCTGCAGGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: EPVRAAGVDLTNTIF*VSRICTVDDSAGGQ
Trigger: CTGCCCACCTGCAGAATCATCAACTGTACAGATCCTGGACACCAAGAAAATAGTGTTCGTCAGGTCCACGCCAGCGGCCCGCACAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS TCA 72 bp CAATGGGCTCAGGAGTCCCACAGTGTCCAGCTTTGGTaGGGGATGGGGAAGAGAGTACATCGAAGAGGAGCT +
Preference number: 6 (lower is better)
Translates to: QWAQESHSVQLW*GMGKRVHRRGA
Trigger: AGCTCCTCTTCGATGTACTCTCTTCCCCATCCCTCACCAAAGCTGGACACTGTGGGACTCCTGAGCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS GCA 72 bp ACCAGTGATGATCCTGCTGGCAGATGCGCACAGACATaGCGATCAGGCGGAAGCCAGCATTGCATTGGTACA +
Preference number: 6 (lower is better)
Translates to: TSDDPAGRCAQT*RSGGSQHCIGT
Trigger: TGTACCAATGCAATGCTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS GCA 72 bp CAGAGTACGCTTGCCGATGCAGCTGTACCGCACCACTaGTCCCACAGTATAACTGTCTCCAGACATCTGGGA +
Preference number: 6 (lower is better)
Translates to: QSTLADAAVPHH*SHSITVSRHLG
Trigger: TCCCAGATGTCTGGAGACAGTTATACTGTGGGAGCAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp AAGTCCTCTTCCAGGGCAAAGGACTGGAACACAAGCTaGATTCTGTGCTGCTCTTCCGCGGTGATGGTCCAC +
Preference number: 6 (lower is better)
Translates to: KSSSRAKDWNTS*ILCCSSAVMVH
Trigger: GTGGACCATCACCGCGGAAGAGCAGCACAGAATCCAGCTTGTGTTCCAGTCCTTTGCCCTGGAAGAGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GCCAGCTCCCCTCACAATGCCATTGGCAAAGGGCTCTaGGTCTGGGCACTCTTGAAGTTCATAGGCTTCACA +
Preference number: 6 (lower is better)
Translates to: ASSPHNAIGKGL*VWALLKFIGFT
Trigger: TGTGAAGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS CCA 72 bp CTGCCTGGAGGTGGTAGCCTTCACTGCAGCTGTACATaGCCTTGGTTCCCACTGTGTACTCCTTGCCAAACA +
Preference number: 6 (lower is better)
Translates to: LPGGGSLHCSCT*PWFPLCTPCQT
Trigger: TGTTTGGCAAGGAGTACACAGTGGGAACCAAGGCCATGTACAGCTGCAGTGAAGGCTACCACCTCCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GTACCTGAAGTCATTGCCCAGCCGAAGGCCATTGGCTaGAATCCCAGGGTCACCACAGTTTATGACGAGGCA +
Preference number: 6 (lower is better)
Translates to: VPEVIAQPKAIG*NPRVTTVYDEA
Trigger: TGCCTCGTCATAAACTGTGGTGACCCTGGGATTCCAGCCAATGGCCTTCGGCTGGGCAATGACTTCAGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GTGAACTCCGCCTCGCTGGCCATGATGTCTGTGGGCTaGATGTTGCGGTCGTACATTGGGTTCTCAAATGTG +
Preference number: 6 (lower is better)
Translates to: VNSASLAMMSVG*MLRSYIGFSNV
Trigger: CACATTTGAGAACCCAATGTACGACCGCAACATCCAGCCCACAGACATCATGGCCAGCGAGGCGGAGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GCCAGCTCCCCTCACAATGCCATTGGCAAAGGGCTCTaGGTCTGGGCACTCTTGAAGTTCATAGGCCTGATA +
Preference number: 6 (lower is better)
Translates to: ASSPHNAIGKGL*VWALLKFIGLI
Trigger: TATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000619121.4
CDS CAA 72 bp GTCGCTCACTTTCATACAGGTGATCCGCTTGGACCCTaGCAGGTCATAGCCCTCGTTGCAGGTGAACTGGAC +
Preference number: 6 (lower is better)
Translates to: VAHFHTGDPLGP*QVIALVAGELD
Trigger: GTCCAGTTCACCTGCAACGAGGGCTATGACCTGCAAGGGTCCAAGCGGATCACCTGTATGAAAGTGAGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp GGGCACTCGTTGTGTCGGAAGGTGGTAAAAGTGATGTaGAAGCCCCTCTTCCCTGTGGAGTGGTCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: GHSLCRKVVKVM*KPLFPVEWSVW
Trigger: CCAGACTGACCACTCCACAGGGAAGAGGGGCTTCAACATCACTTTTACCACCTTCCGACACAACGAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp TGCAGCTCCACGCCACTGTGGTCGATCATGGTGGCATaGACCTTGCTGTTGGCAACTTGGAAGCCAGTCACT +
Preference number: 6 (lower is better)
Translates to: CSSTPLWSIMVA*TLLLATWKPVT
Trigger: AGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGACCACAGTGGCGTGGAGCTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp GAGGTCCAGTCTTTGAAAGCCGAACTGCCCAAAGCCTaGGCCCTTGACAGAGCCTTGGTAGATGAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: EVQSLKAELPKA*ALDRALVDEGG
Trigger: GCCACCTTCATCTACCAAGGCTCTGTCAAGGGCCAAGGCTTTGGGCAGTTCGGCTTTCAAAGACTGGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CGCAACTGCCCTGCTCGATCTCTTCATAAGAAGCCTTaGATCCCAGGGAACTGCCACTGCCATCAGTCTGGA +
Preference number: 6 (lower is better)
Translates to: RNCPARSLHKKP*IPGNCHCHQSG
Trigger: TCCAGACTGATGGCAGTGGCAGTTCCCTGGGATTCAAGGCTTCTTATGAAGAGATCGAGCAGGGCAGTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000338325.1
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GGCACTCTTGAAGTTCATAGGCCTGATACTCCAGCTTaGATCCTGGCCGATTCTGGGAGTGGTCGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: GTLEVHRPDTPA*ILADSGSGRCG
Trigger: TCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGGCCTATGAACTTCAAGAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000619121.4
CDS GCA 72 bp CACTCCGACTCCCATTCTGCGGGATCCCAGGGTCATTaGAGGACGTTGCTGTGGACACTGAAAATTGAATGG +
Preference number: 6 (lower is better)
Translates to: HSDSHSAGSQGH*RTLLWTLKIEW
Trigger: CCATTCAATTTTCAGTGTCCACAGCAACGTCCTGCAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp AGTCTGGTGAGACGGTCACTTTCCAGTCACACTCCTTaGCTGGCGGGTAGGGTTCTGGGTAATTTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: SLVRRSLSSHTP*LAGRVLGNLVR
Trigger: TCTCACCAAATTACCCAGAACCCTACCCGCCAGGCAAGGAGTGTGACTGGAAAGTGACCGTCTCACCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp CAGGAACTGGATGTGAGCTCCAAAGCCCACGGGCAGTaGTATTTTCCAGGAGCAGTCCATGTTACTGGGGTA +
Preference number: 6 (lower is better)
Translates to: QELDVSSKAHGQ*YFPGAVHVTGV
Trigger: TACCCCAGTAACATGGACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTTGGAGCTCACATCCAGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GACAGGACATCAAAGTCCTCTTCCAGGGCAAAGGACTaGAACACAAGCTGGATTCTGTGCTGCTCTTCCGCG +
Preference number: 6 (lower is better)
Translates to: DRTSKSSSRAKD*NTSWILCCSSA
Trigger: CGCGGAAGAGCAGCACAGAATCCAGCTTGTGTTCCAGTCCTTTGCCCTGGAAGAGGACTTTGATGTCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp AGGAACCGCTTGGTAGACAAAGTGGAAGCCTCTGGCTaGTGCGAGGCCTTTGGCGCTGAACTTAATGAGAAC +
Preference number: 6 (lower is better)
Translates to: RNRLVDKVEASG*CEAFGAELNEN
Trigger: GTTCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTGTCTACCAAGCGGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TCCCCTCACAATGCCATTGGCAAAGGGCTCTGGGTCTaGGCACTCTTGAAGTTCATAGGCTTCACAACCAGG +
Preference number: 6 (lower is better)
Translates to: SPHNAIGKGLWV*ALLKFIGFTTR
Trigger: CCTGGTTGTGAAGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS CCA 72 bp AGCTTCCAGGGTAGCTCTGGCTCAGGATCACGCCTGTaGAGTCTGTCAGAAGCTCATTTGTTGGACAGTGCA +
Preference number: 6 (lower is better)
Translates to: SFQGSSGSGSRL*SLSEAHLLDSA
Trigger: TGCACTGTCCAACAAATGAGCTTCTGACAGACTCCACAGGCGTGATCCTGAGCCAGAGCTACCCTGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CCACTGTGTACTCCTTGCCAAACACCATTCCATTCTTaGGGGCCTCAGGAAGCCCACAGGAAAGAGCTTGAC +
Preference number: 6 (lower is better)
Translates to: PLCTPCQTPFHS*GPQEAHRKELD
Trigger: GTCAAGCTCTTTCCTGTGGGCTTCCTGAGGCCCCCAAGAATGGAATGGTGTTTGGCAAGGAGTACACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TGCAGACGGGCTTGGTTCCATTCCATGTCCGGTCCTTaGTGCAGCTCAGCACAGATACTCTATGTGACTCCA +
Preference number: 6 (lower is better)
Translates to: CRRAWFHSMSGP*CSSAQILYVTP
Trigger: TGGAGTCACATAGAGTATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAATGGAACCAAGCCCGTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TCGATCATGGTGGCATTGACCTTGCTGTTGGCAACTTaGAAGCCAGTCACTCTGAGCATGGCTGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SIMVALTLLLAT*KPVTLSMAGCF
Trigger: GAAGCAGCCAGCCATGCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GCTGGATGTTGCGGTCGTACATTGGGTTCTCAAATGTaGCCCGAACATTGGTGTTCTCGTGGCCAGCATAGC +
Preference number: 6 (lower is better)
Translates to: AGCCGRTLGSQM*PEHWCSRGQHS
Trigger: GCTATGCTGGCCACGAGAACACCAATGTTCGGGCCACATTTGAGAACCCAATGTACGACCGCAACATCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TCCCCTCACAATGCCATTGGCAAAGGGCTCTGGGTCTaGGCACTCTTGAAGTTCATAGGCCTGATACTCCAG +
Preference number: 6 (lower is better)
Translates to: SPHNAIGKGLWV*ALLKFIGLILQ
Trigger: CTGGAGTATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000619121.4
CDS CAA 72 bp GCTCCATTTGCCATTGGCCTGACAGCGGATGACCCTTaGGCCAGTATAGTAGTAGCCAGGGTCACAGATGAG +
Preference number: 6 (lower is better)
Translates to: APFAIGLTADDP*ASIVVARVTDE
Trigger: CTCATCTGTGACCCTGGCTACTACTATACTGGCCAAAGGGTCATCCGCTGTCAGGCCAATGGCAAATGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS CAA 72 bp TTGCAGACGGGCTTGGTTCCATTCCATGTCCGGTCCTaGGTGCAGCTCAGCACAGATACTCTATGTGACTCC +
Preference number: 6 (lower is better)
Translates to: LQTGLVPFHVRS*VQLSTDTLCDS
Trigger: GGAGTCACATAGAGTATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAATGGAACCAAGCCCGTCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp GTCGATCATGGTGGCATTGACCTTGCTGTTGGCAACTaGGAAGCCAGTCACTCTGAGCATGGCTGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: VDHGGIDLAVGN*EASHSEHGWLL
Trigger: AAGCAGCCAGCCATGCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp CCACTGTGGTCGATCATGGTGGCATTGACCTTGCTGTaGGCAACTTGGAAGCCAGTCACTCTGAGCATGGCT +
Preference number: 6 (lower is better)
Translates to: PLWSIMVALTLL*ATWKPVTLSMA
Trigger: AGCCATGCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGACCACAGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp GGGCCTCGAAGGTGGGCATCACACATGCGGGATTCTTaGGCTTCAGTGACGCTTTTTGGCTTTTCTCCTACG +
Preference number: 6 (lower is better)
Translates to: GPRRWASHMRDS*ASVTLFGFSPT
Trigger: CGTAGGAGAAAAGCCAAAAAGCGTCACTGAAGCCAAAGAATCCCGCATGTGTGATGCCCACCTTCGAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471438.2
CDS CAA 90 bp TCCCAGGGAACTGCCACTGCCATCAGTCTGGAAGAGGAGCCACATTaGATGATTGGTGCTGACAATGAGATCCGGGACCGATGTACCTGT +
Preference number: 6 (lower is better)
Translates to: SQGTATAISLEEEPH*MIGADNEIRDRCTC
Trigger: ACAGGTACATCGGTCCCGGATCTCATTGTCAGCACCAATCATCAAATGTGGCTCCTCTTCCAGACTGATGGCAGTGGCAGTTCCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000338325.1
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp GCCAGGCATTGGGACCTAGCAGCCCCCTCAGCCATATACCCAGGGTaGCAAACAAACTTGACCACATCGTTGAGGTTAAACTGGTTACCC +
Preference number: 6 (lower is better)
Translates to: ARHWDLAAPSAIYPG*QTNLTTSLRLNWLP
Trigger: GGGTAACCAGTTTAACCTCAACGATGTGGTCAAGTTTGTTTGCAACCCTGGGTATATGGCTGAGGGGGCTGCTAGGTCCCAATGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS TCA 72 bp GAAAGTTGGGGGACAGCAAAGTACCCTGAGTGCCTGTaGCTGAATTCCCACACTCAGCAACACACCTTGGCA +
Preference number: 6 (lower is better)
Translates to: ESWGTAKYPECL*LNSHTQQHTLA
Trigger: TGCCAAGGTGTGTTGCTGAGTGTGGGAATTCAGTCACAGGCACTCAGGGTACTTTGCTGTCCCCCAACTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GGTGCGAGGCCTTTGGCGCTGAACTTAATGAGAACTTaGTTGGAGGTGGCCAAGGGCAGTGATTCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: GARPLALNLMRT*LEVAKGSDSPV
Trigger: TACAGGAGAATCACTGCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTTCAGCGCCAAAGGCCTCGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp TCTGGTGGGAGTAAGTCAAATCCTGATACTCCAGCTTaGATCCTGGCCGATTCTGGGAGTGGTCGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: SGGSKSNPDTPA*ILADSGSGRCG
Trigger: TCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGGATTTGACTTACTCCCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS TCA 72 bp CCCTTTGGCCAGTATAGTAGTAGCCAGGGTCACAGATaGGCATCAGCTGGGCCTGGAACTGATACTGTGTCT +
Preference number: 6 (lower is better)
Translates to: PFGQYSSSQGHR*ASAGPGTDTVS
Trigger: AGACACAGTATCAGTTCCAGGCCCAGCTGATGCTCATCTGTGACCCTGGCTACTACTATACTGGCCAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000465819.1
ENST00000619121.4
CDS TCA 72 bp AACTTGACCACATCGTTGAGGTTAAACTGGTTACCCTaGGTGAGGCCGTTGACAGGGTTGCCTGGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: NLTTSLRLNWLP*VRPLTGLPGCP
Trigger: TGGACACCCAGGCAACCCTGTCAACGGCCTCACTCAGGGTAACCAGTTTAACCTCAACGATGTGGTCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373381.9
ENST00000465819.1
ENST00000619121.4
CDS GCA 72 bp TGTATAGTCAATGACGAAGCCAGCATTGCTCACAGATaGATCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: CIVNDEASIAHR*IAAEGEEEAVA
Trigger: AGCAACAGCCTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCATTGACTATACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp AACCGCTTGGTAGACAAAGTGGAAGCCTCTGGCTGGTaGGAGGCCTTTGGCGCTGAACTTAATGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: NRLVDKVEASGW*EAFGAELNENL
Trigger: CAAGTTCTCATTAAGTTCAGCGCCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTGTCTACCAAGCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS GCA 72 bp AGACGGGCTTGGTTCCATTCCATGTCCGGTCCTTGGTaGAGCTCAGCACAGATACTCTATGTGACTCCATCA +
Preference number: 6 (lower is better)
Translates to: RRAWFHSMSGPW*SSAQILYVTPS
Trigger: TGATGGAGTCACATAGAGTATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAATGGAACCAAGCCCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GCAGTTCAAGTTGTTGGGGTAGAAGTCAGGGAACCCTaGCGACAAGATGGTCCCACTGGAGCCTTGAATGAA +
Preference number: 6 (lower is better)
Translates to: AVQVVGVEVREP*RQDGPTGALNE
Trigger: TTCATTCAAGGCTCCAGTGGGACCATCTTGTCGCCAGGGTTCCCTGACTTCTACCCCAACAACTTGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CATAGGGGCCATTCCGGATTTCTATGTAGTCGTGGTTaGGCTCGGTGGAGAAGTTCAGGAACTGGATGTGAG +
Preference number: 6 (lower is better)
Translates to: HRGHSGFLCSRG*ARWRSSGTGCE
Trigger: CTCACATCCAGTTCCTGAACTTCTCCACCGAGCCCAACCACGACTACATAGAAATCCGGAATGGCCCCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CCCAGACATAGGAAGCGGCGACGGGAGGAGTTGAGTTaGTTCTTTCCAACTCCGAGAGATCAAAACCTCTCA +
Preference number: 6 (lower is better)
Translates to: PRHRKRRREELS*FFPTPRDQNLS
Trigger: TGAGAGGTTTTGATCTCTCGGAGTTGGAAAGAACCAACTCAACTCCTCCCGTCGCCGCTTCCTATGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS CCA 72 bp AACCAGGCCATCACTGAACACAACTCGGGCATTACTTaGAGTCCCAGGGTTCCCACAAGAGATCACTCCACA +
Preference number: 6 (lower is better)
Translates to: NQAITEHNSGIT*SPRVPTRDHST
Trigger: TGTGGAGTGATCTCTTGTGGGAACCCTGGGACTCCAAGTAATGCCCGAGTTGTGTTCAGTGATGGCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp ACTGCCACTGCCATCAGTCTGGAAGAGGAGCCACATTaGATGATTGGTGCTGACAATGAGATCCGGGACCGA +
Preference number: 6 (lower is better)
Translates to: TATAISLEEEPH*MIGADNEIRDR
Trigger: TCGGTCCCGGATCTCATTGTCAGCACCAATCATCAAATGTGGCTCCTCTTCCAGACTGATGGCAGTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000338325.1
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp TTGCCATTTACTGGAACGCCAGGATCCGGGCACTCGTaGTGTCGGAAGGTGGTAAAAGTGATGTTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: LPFTGTPGSGHS*CRKVVKVMLKP
Trigger: GGGCTTCAACATCACTTTTACCACCTTCCGACACAACGAGTGCCCGGATCCTGGCGTTCCAGTAAATGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp GGATCACGCCTGTGGAGTCTGTCAGAAGCTCATTTGTaGGACAGTGCACTTCACATATCGGGGGTGGTCCTT +
Preference number: 6 (lower is better)
Translates to: GSRLWSLSEAHL*DSALHISGVVL
Trigger: AAGGACCACCCCCGATATGTGAAGTGCACTGTCCAACAAATGAGCTTCTGACAGACTCCACAGGCGTGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp TCAGGATCACGCCTGTGGAGTCTGTCAGAAGCTCATTaGTTGGACAGTGCACTTCACATATCGGGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: SGSRLWSLSEAH*LDSALHISGVV
Trigger: GACCACCCCCGATATGTGAAGTGCACTGTCCAACAAATGAGCTTCTGACAGACTCCACAGGCGTGATCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp CGGGCCGCTGGCGTGGACCTGACGAACACTATTTTCTaGGTGTCCAGGATCTGTACAGTTGATGATTCTGCA +
Preference number: 6 (lower is better)
Translates to: RAAGVDLTNTIF*VSRICTVDDSA
Trigger: TGCAGAATCATCAACTGTACAGATCCTGGACACCAAGAAAATAGTGTTCGTCAGGTCCACGCCAGCGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS CAA 90 bp GTTGAAGAAGCAGGAGAACACGCAGCCTGGCTTCTTAGCCGACCATaGGTTATTCTTTTGGCATGTGATTGCCTTCTGTCCCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: VEEAGEHAAWLLSRP*VILLACDCLLSHQL
Trigger: GAGCTGGTGGGACAGAAGGCAATCACATGCCAAAAGAATAACCAATGGTCGGCTAAGAAGCCAGGCTGCGTGTTCTCCTGCTTCTTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 90 bp TCCCCTCACAATGCCATTGGCAAAGGGCTCTGGGTCTGGGCACTCTaGAAGTTCATAGGCTTCACAACCAGGATCAAGATCCCAGACATA +
Preference number: 6 (lower is better)
Translates to: SPHNAIGKGLWVWAL*KFIGFTTRIKIPDI
Trigger: TATGTCTGGGATCTTGATCCTGGTTGTGAAGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS TCA 72 bp TCAAAGGCGAGCTTGATCACCTGTAGGCCAGTTCCATaGACAGGGTTAGGCACACAGCATCCATTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: SKASLITCRPVP*TGLGTQHPLSL
Trigger: CAAGGACAATGGATGCTGTGTGCCTAACCCTGTTCATGGAACTGGCCTACAGGTGATCAAGCTCGCCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS GCA 72 bp ATAAACCTTGAGGACATCTCCTTCGGAGAGTTCGAATaGCCTGGCTTTCAGCTGAATTCCCTTCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: INLEDISFGEFE*PGFQLNSLPWL
Trigger: CAGCCAGGGAAGGGAATTCAGCTGAAAGCCAGGGCATTCGAACTCTCCGAAGGAGATGTCCTCAAGGTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CAGGAGAACACGCAGCCTGGCTTCTTAGCCGACCATTaGTTATTCTTTTGGCATGTGATTGCCTTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: QENTQPGFLADH*LFFWHVIAFCP
Trigger: GGGACAGAAGGCAATCACATGCCAAAAGAATAACCAATGGTCGGCTAAGAAGCCAGGCTGCGTGTTCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CATTCCGGATTTCTATGTAGTCGTGGTTGGGCTCGGTaGAGAAGTTCAGGAACTGGATGTGAGCTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: HSGFLCSRGWAR*RSSGTGCELQS
Trigger: GCTTTGGAGCTCACATCCAGTTCCTGAACTTCTCCACCGAGCCCAACCACGACTACATAGAAATCCGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp CATGATGTCTGTGGGCTGGATGTTGCGGTCGTACATTaGGTTCTCAAATGTGGCCCGAACATTGGTGTTCTC +
Preference number: 6 (lower is better)
Translates to: HDVCGLDVAVVH*VLKCGPNIGVL
Trigger: GAGAACACCAATGTTCGGGCCACATTTGAGAACCCAATGTACGACCGCAACATCCAGCCCACAGACATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GGGAAGAGAGTACATCGAAGAGGAGCTTATAGAAAATaGAGTGGAGCTTGGTCTGAGTGGCAAGGCAGCGGA +
Preference number: 6 (lower is better)
Translates to: GKRVHRRGAYRK*SGAWSEWQGSG
Trigger: TCCGCTGCCTTGCCACTCAGACCAAGCTCCACTCCATTTTCTATAAGCTCCTCTTCGATGTACTCTCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS CAA 72 bp ACAGCTCTGAAGAACCTGACAAAGATGACAAGTCGTTaGCCTGTCTACCTGCCAAGGTGCCTGCGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: TALKNLTKMTSR*PVYLPRCLRVC
Trigger: ACAGACACGCAGGCACCTTGGCAGGTAGACAGGCAAACGACTTGTCATCTTTGTCAGGTTCTTCAGAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS CAA 72 bp AATGCCATTGGCAAAGGGCTCTGGGTCTGGGCACTCTaGAAGTTCATAGGCCTGATACTCCAGCTTGAATCC +
Preference number: 6 (lower is better)
Translates to: NAIGKGLWVWAL*KFIGLILQLES
Trigger: GGATTCAAGCTGGAGTATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000619121.4
CDS CAA 72 bp TGGGACCTAGCAGCCCCCTCAGCCATATACCCAGGGTaGCAAACAAACTTGACCACATCGTTGAGGTTAAAC +
Preference number: 6 (lower is better)
Translates to: WDLAAPSAIYPG*QTNLTTSLRLN
Trigger: GTTTAACCTCAACGATGTGGTCAAGTTTGTTTGCAACCCTGGGTATATGGCTGAGGGGGCTGCTAGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373381.9
ENST00000619121.4
CDS CAA 90 bp AAGCAACTCACAGCTCTGAAGAACCTGACAAAGATGACAAGTCGTTaGCCTGTCTACCTGCCAAGGTGCCTGCGTGTCTGTCCAGTTGTT +
Preference number: 6 (lower is better)
Translates to: KQLTALKNLTKMTSR*PVYLPRCLRVCPVV
Trigger: AACAACTGGACAGACACGCAGGCACCTTGGCAGGTAGACAGGCAAACGACTTGTCATCTTTGTCAGGTTCTTCAGAGCTGTGAGTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS TCA 72 bp AAAGATGTTAAATACCAGGGCGATGACGTAGTCTGGTaGGACGGTCACTTTCCAGTCACACTCCTTGCCTGG +
Preference number: 6 (lower is better)
Translates to: KDVKYQGDDVVW*DGHFPVTLLAW
Trigger: CCAGGCAAGGAGTGTGACTGGAAAGTGACCGTCTCACCAGACTACGTCATCGCCCTGGTATTTAACATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CTCCAAGTGGAAGCCAGCTGCAGATACGCTGATATCTaGGTAGAAATGAAGGTAGAGCTGGTTGGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: LQVEASCRYADI*VEMKVELVGGA
Trigger: AGCACCTCCAACCAGCTCTACCTTCATTTCTACTCAGATATCAGCGTATCTGCAGCTGGCTTCCACTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CAGGGACACACTGATATGTCACAGTTTTGTTGTACCTaGAGTCATTGCCCAGCCGAAGGCCATTGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: QGHTDMSQFCCT*SHCPAEGHWLE
Trigger: TTCCAGCCAATGGCCTTCGGCTGGGCAATGACTTCAGGTACAACAAAACTGTGACATATCAGTGTGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp CCGGTCCTTGGTGCAGCTCAGCACAGATACTCTATGTaGCTCCATCATATAGCCAGGGACACACTGATATGT +
Preference number: 6 (lower is better)
Translates to: PVLGAAQHRYSM*LHHIARDTLIC
Trigger: ACATATCAGTGTGTCCCTGGCTATATGATGGAGTCACATAGAGTATCTGTGCTGAGCTGCACCAAGGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GAAAGTTGGGGGACAGCAAAGTACCCTGAGTGCCTGTaGCTGAATTCCCACACTCAGCTGGAAAGAGAATCA +
Preference number: 6 (lower is better)
Translates to: ESWGTAKYPECL*LNSHTQLERES
Trigger: TGATTCTCTTTCCAGCTGAGTGTGGGAATTCAGTCACAGGCACTCAGGGTACTTTGCTGTCCCCCAACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS TCA 72 bp CACAGGTATAGGGATGATCCAGCCAGTGAGTTGATGTaGATGAGTGGACTTGGCACCAAGGTTTGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: HRYRDDPASELM*MSGLGTKVWAS
Trigger: AGAAGCCCAAACCTTGGTGCCAAGTCCACTCATTCACATCAACTCACTGGCTGGATCATCCCTATACCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489419.1
CDS GCA 72 bp GTATCCAGGGTCACAGCTGAAGGACACGGAGCTCCCTaGAAAATGACCTTCATCATGAACCTTGTAGCCAAA +
Preference number: 6 (lower is better)
Translates to: VSRVTAEGHGAP*KMTFIMNLVAK
Trigger: TTTGGCTACAAGGTTCATGATGAAGGTCATTTTGCAGGGAGCTCCGTGTCCTTCAGCTGTGACCCTGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp TTCGAATGCCCTGGCTTTCAGCTGAATTCCCTTCCCTaGCTGGGTCTGGATGGAGTAGATGCATTCATGATT +
Preference number: 6 (lower is better)
Translates to: FECPGFQLNSLP*LGLDGVDAFMI
Trigger: AATCATGAATGCATCTACTCCATCCAGACCCAGCCAGGGAAGGGAATTCAGCTGAAAGCCAGGGCATTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GGGCAGGCACGGTTGTTCCTGAGAAACTCCCCAGCATaGTTACAGTGTTATCTGCACCATCAAATACTTCCA +
Preference number: 6 (lower is better)
Translates to: GQARLFLRNSPA*LQCYLHHQILP
Trigger: TGGAAGTATTTGATGGTGCAGATAACACTGTAACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CCA 72 bp GGAGTAAGTCAAATCCTGATACTCCAGCTTGAATCCTaGCCGATTCTGGGAGTGGTCGCTGTGGAAATACAC +
Preference number: 6 (lower is better)
Translates to: GVSQILILQLES*PILGVVAVEIH
Trigger: GTGTATTTCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGGATTTGACTTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS CCA 72 bp CACTTACACACGCAGCCTGGCTTCTTAGCCGACCATTaGTTATTCTTTTGGCATGTGATTGCCTTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: HLHTQPGFLADH*LFFWHVIAFCP
Trigger: GGGACAGAAGGCAATCACATGCCAAAAGAATAACCAATGGTCGGCTAAGAAGCCAGGCTGCGTGTGTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS CCA 72 bp TTGAAGTTCATAGGCCTGATACTCCAGCTTGAATCCTaGCCGATTCTGGGAGTGGTCGCTGTGGAAATACAC +
Preference number: 6 (lower is better)
Translates to: LKFIGLILQLES*PILGVVAVEIH
Trigger: GTGTATTTCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAGCTGGAGTATCAGGCCTATGAACTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000619121.4
CDS CAA 72 bp AATGCCATTGGCAAAGGGCTCTGGGTCTGGGCACTCTaGAAGTTCATAGGCTTCACAACCAGGATCAAGATC +
Preference number: 6 (lower is better)
Translates to: NAIGKGLWVWAL*KFIGFTTRIKI
Trigger: GATCTTGATCCTGGTTGTGAAGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241312.8
ENST00000373388.6
CDS CAA 72 bp CTGTCTACCTGCCAAGGTGCCTGCGTGTCTGTCCAGTaGTTGGACTGTCTACAGAAATGCCTCTCAAACTTA +
Preference number: 6 (lower is better)
Translates to: LSTCQGACVSVQ*LDCLQKCLSNL
Trigger: TAAGTTTGAGAGGCATTTCTGTAGACAGTCCAACAACTGGACAGACACGCAGGCACCTTGGCAGGTAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS TCA 72 bp CCGTGTGCCGTTCTTGATGGAACCAGGATCAAAACATaGCTCCCGCGGGTTTTCTGTATAGTCAATGACGAA +
Preference number: 6 (lower is better)
Translates to: PCAVLDGTRIKT*LPRVFCIVNDE
Trigger: TTCGTCATTGACTATACAGAAAACCCGCGGGAGTCATGTTTTGATCCTGGTTCCATCAAGAACGGCACACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000241312.8
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp AGAGTTCATCTTTCCCCACTGAGACCTCCACTCTGTTaGCAGCAATATCTCCTCTCTACCCATCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: RVHLSPLRPPLC*QQYLLSTHQLL
Trigger: AAGGAGCTGATGGGTAGAGAGGAGATATTGCTGTCAACAGAGTGGAGGTCTCAGTGGGGAAAGATGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS CCA 72 bp CTCATTTGTTGGACAGTGCACTTCACATATCGGGGGTaGTCCTTCAAACTGCAGGTAGGTTCCAAGTTTGCA +
Preference number: 6 (lower is better)
Translates to: LICWTVHFTYRG*SFKLQVGSKFA
Trigger: TGCAAACTTGGAACCTACCTGCAGTTTGAAGGACCACCCCCGATATGTGAAGTGCACTGTCCAACAAATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp TCTACCTGCCAAGGTGCCTGCGTGTCTGTCCAGTTGTaGGACTGTCTACAGAAATGCCTCTCAAACTTAAAA +
Preference number: 6 (lower is better)
Translates to: STCQGACVSVQL*DCLQKCLSNLK
Trigger: TTTTAAGTTTGAGAGGCATTTCTGTAGACAGTCCAACAACTGGACAGACACGCAGGCACCTTGGCAGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS CAA 90 bp AAGCTCCACCAGCACCATCTTACACCTCTTCCGGAAAGTCAGATTTaGCTGCCCAAAGCCCTCAGCTTCAGAATCAATTTATCTTGTACT +
Preference number: 6 (lower is better)
Translates to: KLHQHHLTPLPESQI*LPKALSFRINLSCT
Trigger: AGTACAAGATAAATTGATTCTGAAGCTGAGGGCTTTGGGCAGCAAAATCTGACTTTCCGGAAGAGGTGTAAGATGGTGCTGGTGGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS TCA 72 bp TTTTGTACTCCAAGTGGAAGCCAGCTGCAGATACGCTaGTATCTGAGTAGAAATGAAGGTAGAGCTGGTTGG +
Preference number: 6 (lower is better)
Translates to: FCTPSGSQLQIR*YLSRNEGRAGW
Trigger: CCAACCAGCTCTACCTTCATTTCTACTCAGATATCAGCGTATCTGCAGCTGGCTTCCACTTGGAGTACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241312.8
ENST00000373377.1
ENST00000373380.5
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS TCA 72 bp GCCCAAGGTGGAGCTGGGAGTAAAATCCAGCTTTCCTaGTTTCTGGTTAAAATATCTGCAGTGATCGGAGAA +
Preference number: 6 (lower is better)
Translates to: AQGGAGSKIQLS*FLVKISAVIGE
Trigger: TTCTCCGATCACTGCAGATATTTTAACCAGAAATCAGGAAAGCTGGATTTTACTCCCAGCTCCACCTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373377.1
CDS GCA 72 bp CCTGATGGACCATCAAAAATCTCAAACTCATCATATTaGTTCTCGCTGAGGAAGTACTCCACTGTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: PDGPSKISNSSY*FSLRKYSTVRE
Trigger: CTCCCTCACAGTGGAGTACTTCCTCAGCGAGAAGCAATATGATGAGTTTGAGATTTTTGATGGTCCATCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241312.8
ENST00000373381.9
ENST00000373388.6
ENST00000619121.4
CDS CAA 72 bp CAGCACCATCTTACACCTCTTCCGGAAAGTCAGATTTaGCTGCCCAAAGCCCTCAGCTTCAGAATCAATTTA +
Preference number: 6 (lower is better)
Translates to: QHHLTPLPESQI*LPKALSFRINL
Trigger: TAAATTGATTCTGAAGCTGAGGGCTTTGGGCAGCAAAATCTGACTTTCCGGAAGAGGTGTAAGATGGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS GCA 72 bp AGCACCATCTTACACCTCTTCCGGAAAGTCAGATTTTaGTGCCCAAAGCCCTCAGCTTCAGAATCAATTTAT +
Preference number: 6 (lower is better)
Translates to: STILHLFRKVRF*CPKPSASESIY
Trigger: ATAAATTGATTCTGAAGCTGAGGGCTTTGGGCAGCAAAATCTGACTTTCCGGAAGAGGTGTAAGATGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS GCA 72 bp GAGAATCACAATAACCATAGATTAACCCCCATCAGCTaGATCCAGAAAGCAACTCACAGCTCTGAAGAACCT +
Preference number: 6 (lower is better)
Translates to: ENHNNHRLTPIS*IQKATHSSEEP
Trigger: AGGTTCTTCAGAGCTGTGAGTTGCTTTCTGGATGCAGCTGATGGGGGTTAATCTATGGTTATTGTGATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373380.5
CDS CCA 72 bp ACACATGCGGGATTCTTTGGCTTCAGTGACGCTTTTTaGCTTTTCTCCTACGTTTCTGACCGAATTTCTTCT +
Preference number: 6 (lower is better)
Translates to: THAGFFGFSDAF*LFSYVSDRISS
Trigger: AGAAGAAATTCGGTCAGAAACGTAGGAGAAAAGCCAAAAAGCGTCACTGAAGCCAAAGAATCCCGCATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471438.2
CDS TCA 72 bp CCCAGAAGACAACTTCTATTCCTCAGTCTTAGACTTTaGGTTTCCACACTTAGACCCTCCTTGTTGCATTGT +
Preference number: 6 (lower is better)
Translates to: PRRQLLFLSLRL*VSTLRPSLLHC
Trigger: ACAATGCAACAAGGAGGGTCTAAGTGTGGAAACTCAAAGTCTAAGACTGAGGAATAGAAGTTGTCTTCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS CCA 72 bp GGTCTTGTCTTCTGTCCTTATGCAAATTTGATCACATaGGCCACCATTAGGCTCATTTTCTTGCTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: GLVFCPYANLIT*ATIRLIFLLVP
Trigger: TGGAACAAGCAAGAAAATGAGCCTAATGGTGGCCCATGTGATCAAATTTGCATAAGGACAGAAGACAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS CAA 90 bp CTGAATTGTTCATACTCTTCCTACTCAAAATCACAATATCTTCATTaGTGCACAAAAACACAGTGCTCCTTGAGAGGTCAGCAGAAGCCC +
Preference number: 6 (lower is better)
Translates to: LNCSYSSYSKSQYLH*CTKTQCSLRGQQKP
Trigger: GGGCTTCTGCTGACCTCTCAAGGAGCACTGTGTTTTTGTGCACAAATGAAGATATTGTGATTTTGAGTAGGAAGAGTATGAACAATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489419.1
CDS TCA 72 bp AATAGGAGGAAAACTTGCATTTACAGAACCCTGCACTaGGAGCTCTCACATAGGCTAATACATTTAATTCTC +
Preference number: 6 (lower is better)
Translates to: NRRKTCIYRTLH*ELSHRLIHLIL
Trigger: GAGAATTAAATGTATTAGCCTATGTGAGAGCTCTCAGTGCAGGGTTCTGTAAATGCAAGTTTTCCTCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489419.1
CDS CAA 72 bp TCATACTCTTCCTACTCAAAATCACAATATCTTCATTaGTGCACAAAAACACAGTGCTCCTTGAGAGGTCAG +
Preference number: 6 (lower is better)
Translates to: SYSSYSKSQYLH*CTKTQCSLRGQ
Trigger: CTGACCTCTCAAGGAGCACTGTGTTTTTGTGCACAAATGAAGATATTGTGATTTTGAGTAGGAAGAGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489419.1
CDS CAA 90 bp TCAGATTTTGCTGCCCAAAGCCCTCAGCTTCAGAATCAATTTATCTaGTACTTGTTTCCAAGAATTAGATGGTATATTTGCAGTCTGTTG +
Preference number: 6 (lower is better)
Translates to: SDFAAQSPQLQNQFI*YLFPRIRWYICSLL
Trigger: CAACAGACTGCAAATATACCATCTAATTCTTGGAAACAAGTACAAGATAAATTGATTCTGAAGCTGAGGGCTTTGGGCAGCAAAATCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS CAA 90 bp TTTGCTGCCCAAAGCCCTCAGCTTCAGAATCAATTTATCTTGTACTaGTTTCCAAGAATTAGATGGTATATTTGCAGTCTGTTGAAACAT +
Preference number: 6 (lower is better)
Translates to: FAAQSPQLQNQFILY*FPRIRWYICSLLKH
Trigger: ATGTTTCAACAGACTGCAAATATACCATCTAATTCTTGGAAACAAGTACAAGATAAATTGATTCTGAAGCTGAGGGCTTTGGGCAGCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338325.1
CDS TCA 72 bp TCCAGCTTTCCTGATTTCTGGTTAAAATATCTGCAGTaGTCTGTAAATTGCAAATATGTGCATCATTCCATA +
Preference number: 6 (lower is better)
Translates to: SSFPDFWLKYLQ*SVNCKYVHHSI
Trigger: TATGGAATGATGCACATATTTGCAATTTACAGATCACTGCAGATATTTTAACCAGAAATCAGGAAAGCTGGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489419.1