Pregenerated sensors for CSGALNACT2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000273008Ensembl transcript IDs: ENST00000609407.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCCCCGCTCGGACTCCCAGGATCGGCTTCCGAGCGGGACAGCGCTaGAGTCCACGAGTCCGGGCAGGGGCGCCTCCAGGCCGGAGCGGT | + |
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Preference number: 5 (lower is better) Translates to: GPARTPRIGFRAGQR*SPRVRAGAPPGRSG Trigger: ACCGCTCCGGCCTGGAGGCGCCCCTGCCCGGACTCGTGGACTGCAGCGCTGTCCCGCTCGGAAGCCGATCCTGGGAGTCCGAGCGGGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 90 bp | CCTGCGGCTTCAGTCTCCCCGCCGCTAGCTGAGGGCCGTGGCCGCTaGACAGAGGCTTGTGAGGATTCGGGGGTTCAGGCAGCGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: PAASVSPPLAEGRGR*TEACEDSGVQAAPA Trigger: GGCGGGCGCTGCCTGAACCCCCGAATCCTCACAAGCCTCTGTGCAGCGGCCACGGCCCTCAGCTAGCGGCGGGGAGACTGAAGCCGCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 90 bp | TGGCGGCGGAGGGCGAGGCTCTGCGGTGCGTGGCAGATGGGAATTTaGTCGGTGGCGGCTCCTCTTTCTGGAGAGCTTCCCAGCGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: WRRRARLCGAWQMGI*SVAAPLSGELPSVP Trigger: GGGGACGCTGGGAAGCTCTCCAGAAAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTCCGCCGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 90 bp | GTCCACGAGTCCGGGCAGGGGCGCCTCCAGGCCGGAGCGGTTTCCTaGCTCGGGCACTCTGCTGTCTCCACAAACGGTTTTTGGAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: VHESGQGRLQAGAVS*LGHSAVSTNGFWRH Trigger: GTGCCTCCAAAAACCGTTTGTGGAGACAGCAGAGTGCCCGAGGCAGGAAACCGCTCCGGCCTGGAGGCGCCCCTGCCCGGACTCGTGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 90 bp | AGGCTTGTGAGGATTCGGGGGTTCAGGCAGCGCCCGCCGCGCATCTaGCAGACGTGCGGCCACAGGGTAGGAGCAGTAAGAAGGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: RLVRIRGFRQRPPRI*QTCGHRVGAVRRIQ Trigger: CTGGATCCTTCTTACTGCTCCTACCCTGTGGCCGCACGTCTGGCAGATGCGCGGCGGGCGCTGCCTGAACCCCCGAATCCTCACAAGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS CCA 90 bp | GAAAATGCTGGCGGCGGAGGGCGAGGCTCTGCGGTGCGTGGCAGATaGGAATTTGCTCGGTGGCGGCTCCTCTTTCTGGAGAGCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: ENAGGGGRGSAVRGR*EFARWRLLFLESFP Trigger: TGGGAAGCTCTCCAGAAAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTCCGCCGCCAGCATTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 90 bp | GAACAAAGAAAGAAAATGCTGGCGGCGGAGGGCGAGGCTCTGCGGTaGGTGGCAGATGGGAATTTGCTCGGTGGCGGCTCCTCTTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: EQRKKMLAAEGEALR*VADGNLLGGGSSFW Trigger: CCAGAAAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTCCGCCGCCAGCATTTTCTTTCTTTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS CCA 90 bp | AAAGAAAGAAAATGCTGGCGGCGGAGGGCGAGGCTCTGCGGTGCGTaGCAGATGGGAATTTGCTCGGTGGCGGCTCCTCTTTCTGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: KERKCWRRRARLCGA*QMGICSVAAPLSGE Trigger: CTCTCCAGAAAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTCCGCCGCCAGCATTTTCTTTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 72 bp | CGGCGCCGTCGCGCCTTCGCTCGCCCGCTTAGGCCGTaGTCGCGGTGGCGTGGGAGACAGAGAGCCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: RRRRAFARPLRP*SRWRGRQRAQG Trigger: TCCCTGGGCTCTCTGTCTCCCACGCCACCGCGAGCACGGCCTAAGCGGGCGAGCGAAGGCGCGACGGCGCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 72 bp | CGGACTCCCAGGATCGGCTTCCGAGCGGGACAGCGCTaGAGTCCACGAGTCCGGGCAGGGGCGCCTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RTPRIGFRAGQR*SPRVRAGAPPG Trigger: GCCTGGAGGCGCCCCTGCCCGGACTCGTGGACTGCAGCGCTGTCCCGCTCGGAAGCCGATCCTGGGAGTCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS CAA 90 bp | CTGGCGGCGGAGGGCGAGGCTCTGCGGTGCGTGGCAGATGGGAATTaGCTCGGTGGCGGCTCCTCTTTCTGGAGAGCTTCCCAGCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LAAEGEALRCVADGN*LGGGSSFWRASQRP Trigger: GGGACGCTGGGAAGCTCTCCAGAAAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTCCGCCGCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS CCA 72 bp | GGCGGCGGAGGGCGAGGCTCTGCGGTGCGTGGCAGATaGGAATTTGCTCGGTGGCGGCTCCTCTTTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GGGGRGSAVRGR*EFARWRLLFLE Trigger: CTCCAGAAAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTCCGCCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 72 bp | AGGATTCGGGGGTTCAGGCAGCGCCCGCCGCGCATCTaGCAGACGTGCGGCCACAGGGTAGGAGCAGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: RIRGFRQRPPRI*QTCGHRVGAVR Trigger: TCTTACTGCTCCTACCCTGTGGCCGCACGTCTGGCAGATGCGCGGCGGGCGCTGCCTGAACCCCCGAATCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 72 bp | TCAGTCTCCCCGCCGCTAGCTGAGGGCCGTGGCCGCTaGACAGAGGCTTGTGAGGATTCGGGGGTTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SVSPPLAEGRGR*TEACEDSGVQA Trigger: TGCCTGAACCCCCGAATCCTCACAAGCCTCTGTGCAGCGGCCACGGCCCTCAGCTAGCGGCGGGGAGACTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 72 bp | AAGAAAATGCTGGCGGCGGAGGGCGAGGCTCTGCGGTaGGTGGCAGATGGGAATTTGCTCGGTGGCGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KKMLAAEGEALR*VADGNLLGGGS Trigger: GGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTCCGCCGCCAGCATTTTCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS CCA 72 bp | AAATGCTGGCGGCGGAGGGCGAGGCTCTGCGGTGCGTaGCAGATGGGAATTTGCTCGGTGGCGGCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KCWRRRARLCGA*QMGICSVAAPL Trigger: AAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTCCGCCGCCAGCATTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 72 bp | AGGGCGAGGCTCTGCGGTGCGTGGCAGATGGGAATTTaGTCGGTGGCGGCTCCTCTTTCTGGAGAGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: RARLCGAWQMGI*SVAAPLSGELP Trigger: GGGAAGCTCTCCAGAAAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS CCA 72 bp | GGCTCTGCGGTGCGTGGCAGATGGGAATTTGCTCGGTaGCGGCTCCTCTTTCTGGAGAGCTTCCCAGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: GSAVRGRWEFAR*RLLFLESFPAS Trigger: GGACGCTGGGAAGCTCTCCAGAAAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS CAA 72 bp | GAGGGCGAGGCTCTGCGGTGCGTGGCAGATGGGAATTaGCTCGGTGGCGGCTCCTCTTTCTGGAGAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: EGEALRCVADGN*LGGGSSFWRAS Trigger: GGAAGCTCTCCAGAAAGAGGAGCCGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS GCA 72 bp | AAAGAAAGAAAATGCTGGCGGCGGAGGGCGAGGCTCTaGGGTGCGTGGCAGATGGGAATTTGCTCGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: KERKCWRRRARL*GAWQMGICSVA Trigger: CGCCACCGAGCAAATTCCCATCTGCCACGCACCGCAGAGCCTCGCCCTCCGCCGCCAGCATTTTCTTTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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| CDS CCA 72 bp | GAGAGCCCAGGGAGGACCCTGGAACATGCAGTGGTATaGAAGACGCCTAAGAAAGGGCTTCTCTTTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: ESPGRTLEHAVV*KTPKKGLLFPL Trigger: GAGTGGAAAGAGAAGCCCTTTCTTAGGCGTCTTCCATACCACTGCATGTTCCAGGGTCCTCCCTGGGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609407.1 |
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