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Pregenerated sensors for CSGALNACT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169826

Ensembl transcript IDs: ENST00000374466.4

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CTGCAGAGCAAAGCAAGGCCCAACAGCAACCAGTGGGTCCGGGTGTaGAGAATCAGTCCTCTTCTAGGCATTCTTATTAATGTGTATTTG +
Preference number: 5 (lower is better)
Translates to: LQSKARPNSNQWVRV*RISPLLGILINVYL
Trigger: CAAATACACATTAATAAGAATGCCTAGAAGAGGACTGATTCTTCACACCCGGACCCACTGGTTGCTGTTGGGCCTTGCTTTGCTCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS TCA 90 bp GGTAGTTTGGCCCCTATGCTAACTTCAGCTTTGTCAATTTGGGAATaGAGAAACTCTAAAAGATCACTAGGTGCTTGCTCTTTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GSLAPMLTSALSIWE*RNSKRSLGACSLLL
Trigger: GAGCAACAAAGAGCAAGCACCTAGTGATCTTTTAGAGTTTCTTCATTCCCAAATTGACAAAGCTGAAGTTAGCATAGGGGCCAAACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS CCA 90 bp ATTCTTGTTTTAGTTGGGCAATTTGGCGTTTCAGACTGGTTGCCCTaGTCTGATAATGTTCTTCTTGTTCCTGTAGGAGGGCTTGATAAT +
Preference number: 5 (lower is better)
Translates to: ILVLVGQFGVSDWLP*SDNVLLVPVGGLDN
Trigger: ATTATCAAGCCCTCCTACAGGAACAAGAAGAACATTATCAGACCAGGGCAACCAGTCTGAAACGCCAAATTGCCCAACTAAAACAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS CCA 90 bp TTTCTTGTAATTCTTGTTTTAGTTGGGCAATTTGGCGTTTCAGACTaGTTGCCCTGGTCTGATAATGTTCTTCTTGTTCCTGTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: FLVILVLVGQFGVSD*LPWSDNVLLVPVGG
Trigger: CCCTCCTACAGGAACAAGAAGAACATTATCAGACCAGGGCAACCAGTCTGAAACGCCAAATTGCCCAACTAAAACAAGAATTACAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS CAA 90 bp ATGACCTCCAAGCCCGCTTCAATAACTTCCACCAATTCATCTCGTTaGTCTTTTCTAACTGGCTTTTCTTCAGGATGGCGAGTGAGACCC +
Preference number: 6 (lower is better)
Translates to: MTSKPASITSTNSSR*SFLTGFSSGWRVRP
Trigger: GGGTCTCACTCGCCATCCTGAAGAAAAGCCAGTTAGAAAAGACAAACGAGATGAATTGGTGGAAGTTATTGAAGCGGGCTTGGAGGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS TCA 72 bp AAAGCAAGGCCCAACAGCAACCAGTGGGTCCGGGTGTaGAGAATCAGTCCTCTTCTAGGCATTCTTATTAAT +
Preference number: 6 (lower is better)
Translates to: KARPNSNQWVRV*RISPLLGILIN
Trigger: ATTAATAAGAATGCCTAGAAGAGGACTGATTCTTCACACCCGGACCCACTGGTTGCTGTTGGGCCTTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS CCA 72 bp TTAGTTGGGCAATTTGGCGTTTCAGACTGGTTGCCCTaGTCTGATAATGTTCTTCTTGTTCCTGTAGGAGGG +
Preference number: 6 (lower is better)
Translates to: LVGQFGVSDWLP*SDNVLLVPVGG
Trigger: CCCTCCTACAGGAACAAGAAGAACATTATCAGACCAGGGCAACCAGTCTGAAACGCCAAATTGCCCAACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS CAA 72 bp CTTTCAAAGGGAATGACCCCATACTCACTGGGTAGTTaGGCCCCTATGCTAACTTCAGCTTTGTCAATTTGG +
Preference number: 6 (lower is better)
Translates to: LSKGMTPYSLGS*APMLTSALSIW
Trigger: CCAAATTGACAAAGCTGAAGTTAGCATAGGGGCCAAACTACCCAGTGAGTATGGGGTCATTCCCTTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS CAA 90 bp CTTGTAATTCTTGTTTTAGTTGGGCAATTTGGCGTTTCAGACTGGTaGCCCTGGTCTGATAATGTTCTTCTTGTTCCTGTAGGAGGGCTT +
Preference number: 6 (lower is better)
Translates to: LVILVLVGQFGVSDW*PWSDNVLLVPVGGL
Trigger: AAGCCCTCCTACAGGAACAAGAAGAACATTATCAGACCAGGGCAACCAGTCTGAAACGCCAAATTGCCCAACTAAAACAAGAATTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS CAA 72 bp CTTGTTTTAGTTGGGCAATTTGGCGTTTCAGACTGGTaGCCCTGGTCTGATAATGTTCTTCTTGTTCCTGTA +
Preference number: 6 (lower is better)
Translates to: LVLVGQFGVSDW*PWSDNVLLVPV
Trigger: TACAGGAACAAGAAGAACATTATCAGACCAGGGCAACCAGTCTGAAACGCCAAATTGCCCAACTAAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374466.4
CDS CCA 72 bp ATTCTTGTTTTAGTTGGGCAATTTGGCGTTTCAGACTaGTTGCCCTGGTCTGATAATGTTCTTCTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: ILVLVGQFGVSD*LPWSDNVLLVP
Trigger: AGGAACAAGAAGAACATTATCAGACCAGGGCAACCAGTCTGAAACGCCAAATTGCCCAACTAAAACAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374466.4