RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSF3R (Homo sapiens)

Ensembl gene IDs: ENSG00000119535

Ensembl transcript IDs: ENST00000331941.6, ENST00000361632.8, ENST00000373103.5, ENST00000373104.5, ENST00000373106.6, ENST00000464365.2, ENST00000464465.6, ENST00000469380.1, ENST00000480825.6, ENST00000484762.1, ENST00000487540.6, ENST00000489551.5, ENST00000526980.5, ENST00000533491.1

Found 663 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTaGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGA +
Preference number: 1 (lower is better)
Translates to: NKHKRPLGGAGWSMI*SLKYADRLGGPAYG
Trigger: TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR CCA 90 bp GAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATaGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGC +
Preference number: 1 (lower is better)
Translates to: EVIGNKHKRPLGGAG*SMIWSLKYADRLGG
Trigger: GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGATTaGGAGGAGAGGGAGATGCTG +
Preference number: 2 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGPAYGD*EEREML
Trigger: CAGCATCTCCCTCTCCTCCCAATCTCCATAGGCTGG...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCCAGCCTATGGAGATTaGGAGGAGAGGGAGATGCTG +
Preference number: 2 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWPAYGD*EEREML
Trigger: CAGCATCTCCCTCTCCTCCCAATCTCCATAGGCTGG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR-3UTR GCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCCTGGTCCTTAAAGTATaGAGATCGCCTGGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSLVLKV*RSPGRP
Trigger: GGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAG...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGTTAGTCATGGGCTTATaGACCCTCCCCTCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSLVMGL*TLPSSP
Trigger: TGGAGAAGAGGGGAGGGTCCATAAGCCCATGACTAA...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGAGATGGTGAGAGCCTaGGCTGGGGTAGTTTTTAGT +
Preference number: 2 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGEMVRA*AGVVFS
Trigger: ACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGAGATGGTGAGAGCCTaGGCTGGGGTAGTTTTTAGT +
Preference number: 2 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVEMVRA*AGVVFS
Trigger: ACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGAGATGGTGAGAGCCTaGGCTGGGGTAGTTTTTAGT +
Preference number: 2 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWEMVRA*AGVVFS
Trigger: ACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCTTAGTCATGGGCTTATaGACCCTCCCCTCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSLVMGL*TLPSSP
Trigger: TGGAGAAGAGGGGAGGGTCCATAAGCCCATGACTAA...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR GCA 72 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATaGAGATCGCCTGGGAGGCCCAGCCTATGGAGATTG +
Preference number: 3 (lower is better)
Translates to: WGWMEHDLVLKV*RSPGRPSLWRL
Trigger: CAATCTCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR CCA 72 bp AAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTaGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCA +
Preference number: 3 (lower is better)
Translates to: KRPLGGAGWSMI*SLKYADRLGGP
Trigger: TGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR-3UTR CAA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACCCAGCCTATGGAGATaGGGAGGAGAGGGAGATGCT +
Preference number: 3 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRPSLWR*GGEGDA
Trigger: AGCATCTCCCTCTCCTCCCAATCTCCATAGGCTGGG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR CCA 72 bp TATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTaGATGGAGCATGATCTGGTCCTTAAAGTATGCAGA +
Preference number: 3 (lower is better)
Translates to: YRKQAQKAIGWG*MEHDLVLKVCR
Trigger: TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCTGTAGGCAGCCTGCCTaGGGAGGGGCCGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPCRQPA*GGAASG
Trigger: CCCTGAAGCGGCCCCTCCCCAGGCAGGCTGCCTACA...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCGCAGGGTGTAGGCCGTaGCTGGGAGGAGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPAGCRP*LGGARR
Trigger: TCTGCGGGCTCCTCCCAGCCACGGCCTACACCCTGC...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCGGCTGGAGGGTAGCCTaGGCGCAGCTCAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPGWRVA*AQLNLV
Trigger: GACCAGGTTGAGCTGCGCGCAGGCTACCCTCCAGCC...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCGGCTCTGCCCGTCCTTaGGCACGCAGTCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPGSARP*ARSPGW
Trigger: CCATCCTGGACTGCGTGCCCAAGGACGGGCAGAGCC...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCTTGGTGGCCCCAGCCTaGCTGGCAGCCATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPLVAPA*LAAMRW
Trigger: CCACCTCATGGCTGCCAGCCAGGCTGGGGCCACCAA...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCTGCCTGCCCCCGGGCTaGAGCTCTGCTCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSCLPPG*SSAPSL
Trigger: GAGACTGGGAGCAGAGCTTCAGCCCGGGGGCAGGCA...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCCCGCAGAGCTCATACTaGAGGGCCTCCAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPPQSSY*RASKGR
Trigger: CCTCCCCTTGGAGGCCCTTCAGTATGAGCTCTGCGG...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGGGCCGCTTCAGGGCTaGGGTCCATGGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPGPLQG*GPWSAA
Trigger: TGCTGCGGACCATGGACCCCAGCCCTGAAGCGGCCC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCTGTAGGCAGCCTGCCTaGGGAGGGGCCGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPCRQPA*GGAASG
Trigger: CCCTGAAGCGGCCCCTCCCCAGGCAGGCTGCCTACA...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGGTGTAGGCCGTGGCTaGGAGGAGCCCGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRGVGRG*EEPAEL
Trigger: GAGCTCTGCGGGCTCCTCCCAGCCACGGCCTACACC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCTCCAGTCGCTCCAGTaGCCAGGCAGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSLQSLQ*PGRGQR
Trigger: CCGCTGGCCCCTGCCTGGCCACTGGAGCGACTGGAG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCTCCAGTCGCTCCAGTaGCCAGGCAGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPLQSLQ*PGRGQR
Trigger: CCGCTGGCCCCTGCCTGGCCACTGGAGCGACTGGAG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCAGAAGACCACCGGAGTaGGACGAGAGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPRRPPE*DERSRL
Trigger: CAGCCGGGACCTCTCGTCCCACTCCGGTGGTCTTCT...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCTGAGGCCATGGATTaGGGGGCTCCCAGCCTACCC +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGPEAMD*GAPSLP
Trigger: GGGTAGGCTGGGAGCCCCCCAATCCATGGCCTCAGG...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCTTGGTGGCCCCAGCCTaGCTGGCAGCCATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGLVAPA*LAAMRW
Trigger: CCACCTCATGGCTGCCAGCCAGGCTGGGGCCACCAA...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGAGCTTGGTGATGGGTaGCGTGCCAAGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGELGDG*RAKAGQ
Trigger: CTGCCCGGCCTTGGCACGCCACCCATCACCAAGCTC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCGCCCAGGCTCCCACCTaGCTGGGTGCCATCCTTATG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPAQAPT*LGAILM
Trigger: CATAAGGATGGCACCCAGCCAGGTGGGAGCCTGGGC...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR TCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCTGGGGGCTGAGACACTaGTGTGCCCGCACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGWGLRH*CARTPP
Trigger: TGGAGGAGTGCGGGCACATCAGTGTCTCAGCCCCCA...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGATGCCTGCCCCCGGGCTaGAGCTCTGCTCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGCLPPG*SSAPSL
Trigger: GAGACTGGGAGCAGAGCTTCAGCCCGGGGGCAGGCA...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGGCCCCAGCCTGGCCTaGGGGTCTCCAAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSGPSLA*GSPRNH
Trigger: GTGGTTTCTTGGAGACCCTCAGGCCAGGCTGGGGCC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCACGAGAGGTCCCGGCTaGGTTATAGGCCACAAGGGC +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPTRGPG*VIGHKG
Trigger: GCCCTTGTGGCCTATAACTCAGCCGGGACCTCTCGT...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCCCGCCAAGAGGGGCTaGGTGGAGTCACAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSPAKRG*VESQRR
Trigger: TCTCCGCTGTGACTCCACTCAGCCCCTCTTGGCGGG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTGTGAGGGAAGCTGGTaGGGCCCGGGCAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRCEGSW*GPGSLP
Trigger: AGGAAGGCTGCCCGGGCCTCACCAGCTTCCCTCACA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR GCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGGGCTGGGTGGAAACTaGTCTTGGGTCCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGGLGGN*SWVPLE
Trigger: CTCCAGGGGGACCCAAGAGCAGTTTCCACCCAGCCC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCGGACCTGATCGCTGGTaGCAGACTGGGATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPGPDRW*QTGIGA
Trigger: AGCCCCAATCCCAGTCTGGCACCAGCGATCAGGTCC...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACCTCCTGCCCTCCCTTaGGCCTTCGAGGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGPPALP*AFEGTG
Trigger: GCCTGTGCCCTCGAAGGCGCAAGGGAGGGCAGGAGG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCAGAGGTTGTGGGGTATaGCTGGAGGGTAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPRGCGV*LEGSLR
Trigger: GCGCAGGCTACCCTCCAGCCATACCCCACAACCTCT...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCAAGCTGGTGGGTAGGTaGGTCTCAGGTCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPKLVGR*VSGPGS
Trigger: GGAGCCAGGACCTGAGACCCACCTACCCACCAGCTT...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGGCTCTGCCCGTCCTTaGGCACGCAGTCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPGSARP*ARSPGW
Trigger: CCATCCTGGACTGCGTGCCCAAGGACGGGCAGAGCC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCGTGGGATGCAGCAGTaGCTCTGCCCGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSRGMQQ*LCPSLG
Trigger: GCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGGGCCGCTTCAGGGCTaGGGTCCATGGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPGPLQG*GPWSAA
Trigger: TGCTGCGGACCATGGACCCCAGCCCTGAAGCGGCCC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGGGCCGCTTCAGGGCTaGGGTCCATGGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGGPLQG*GPWSAA
Trigger: TGCTGCGGACCATGGACCCCAGCCCTGAAGCGGCCC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCCCACCAGTGCCCAGCTaGCTTCTCCACGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPPPVPS*LLHAAA
Trigger: AGCCGCAGCGTGGAGAAGCCAGCTGGGCACTGGTGG...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCACCAGTGCCCAGCTaGCTTCTCCACGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRPPVPS*LLHAAA
Trigger: AGCCGCAGCGTGGAGAAGCCAGCTGGGCACTGGTGG...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGGTGTAGGCCGTGGCTaGGAGGAGCCCGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVGVGRG*EEPAEL
Trigger: GAGCTCTGCGGGCTCCTCCCAGCCACGGCCTACACC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGGTGTAGGCCGTGGCTaGGAGGAGCCCGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPGVGRG*EEPAEL
Trigger: GAGCTCTGCGGGCTCCTCCCAGCCACGGCCTACACC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGCAGGGTGTAGGCCGTaGCTGGGAGGAGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVAGCRP*LGGARR
Trigger: TCTGCGGGCTCCTCCCAGCCACGGCCTACACCCTGC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACTCCAGTCGCTCCAGTaGCCAGGCAGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRLQSLQ*PGRGQR
Trigger: CCGCTGGCCCCTGCCTGGCCACTGGAGCGACTGGAG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCCCATGGCATGGAGTCTaGTCAGAGCTGGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPPWHGV*SELGLC
Trigger: GCAGAGGCCCAGCTCTGACCAGACTCCATGCCATGG...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGGACTGTACTGTTGGTaGCCCCAGCCTGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGGLYCW*PQPGWQ
Trigger: CTGCCAGCCAGGCTGGGGCCACCAACAGTACAGTCC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGCTGTGAGCTGGGTCTaGGACACTTGGCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGAVSWV*DTWPEG
Trigger: CCCCTCTGGCCAAGTGTCCCAGACCCAGCTCACAGC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGAGCTTGGTGATGGGTaGCGTGCCAAGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSELGDG*RAKAGQ
Trigger: CTGCCCGGCCTTGGCACGCCACCCATCACCAAGCTC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCGTCTCTGAGCTGTTATaGGACTCCCAGGGCACCGGC +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPVSELL*DSQGTG
Trigger: GCCGGTGCCCTGGGAGTCCCATAACAGCTCAGAGAC...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGCGGAGATAGTGCCCTaGCCCTGGGCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPAEIVP*PWACGA
Trigger: AGCCCCACAAGCCCAGGGCCAGGGCACTATCTCCGC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGCGGAGATAGTGCCCTaGCCCTGGGCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSAEIVP*PWACGA
Trigger: AGCCCCACAAGCCCAGGGCCAGGGCACTATCTCCGC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGCGGAGATAGTGCCCTaGCCCTGGGCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRAEIVP*PWACGA
Trigger: AGCCCCACAAGCCCAGGGCCAGGGCACTATCTCCGC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGTCGTCCTCCTGGCTTaGGGCTGGGGTTACCAGGGT +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGVVLLA*GWGYQG
Trigger: ACCCTGGTAACCCCAGCCCCAAGCCAGGAGGACGAC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGAGCGCCTCCATCCCATaGACCCGGATCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRSASIP*TRIPCR
Trigger: CCTGCAGGGGATCCGGGTCCATGGGATGGAGGCGCT...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGTGGACGATGGGGGCTaGGACACTGATGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSVDDGG*DTDVPA
Trigger: TGCGGGCACATCAGTGTCTCAGCCCCCATCGTCCAC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTGCCTGCCCCCGGGCTaGAGCTCTGCTCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWCLPPG*SSAPSL
Trigger: GAGACTGGGAGCAGAGCTTCAGCCCGGGGGCAGGCA...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCACCATGTGTCCAGTCTaGCAGTGGGGGCCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSTMCPV*QWGPVR
Trigger: CCGAACGGGCCCCCACTGTCAGACTGGACACATGGT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGGCCCCAGCCTGGCCTaGGGGTCTCCAAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPGPSLA*GSPRNH
Trigger: GTGGTTTCTTGGAGACCCTCAGGCCAGGCTGGGGCC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCTTCCACAGAGGCAGGTaGGCAACAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGFHRGR*ATAGGR
Trigger: TCGGCCTCCTGCTGTTGCTCACCTGCCTCTGTGGAA...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCAGGCATCCTCCTCCATaGTTGTGGGCACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGRHPPP*LWAPRS
Trigger: GCTCCTGGGTGCCCACAATCATGGAGGAGGATGCCT...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGCCAAGAGGGGCTaGGTGGAGTCACAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPPAKRG*VESQRR
Trigger: TCTCCGCTGTGACTCCACTCAGCCCCTCTTGGCGGG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCCGCCAAGAGGGGCTaGGTGGAGTCACAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSPAKRG*VESQRR
Trigger: TCTCCGCTGTGACTCCACTCAGCCCCTCTTGGCGGG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACCCGCCAAGAGGGGCTaGGTGGAGTCACAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGPAKRG*VESQRR
Trigger: TCTCCGCTGTGACTCCACTCAGCCCCTCTTGGCGGG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACCAGGAAGGAGCCTGTaGGGGAAGCTGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGPGRSL*GKLVRP
Trigger: GGGCCTCACCAGCTTCCCTCACAGGCTCCTTCCTGG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR GCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCCAGCCCAAGTCAGGCTaGAGTTTCCCAGCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPQPKSG*SFPALP
Trigger: TGGCAAGGCTGGGAAACTGCAGCCTGACTTGGGCTG...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCACAGACGCTGCTGCCTaGCCCCGGGCTGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVTDAAA*PRAEAL
Trigger: CAGAGCTTCAGCCCGGGGGCAGGCAGCAGCGTCTGT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGGATCTGCAGGCTGTTaGCCCAGTTCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGGSAGC*PSSGSR
Trigger: CCTGCTGCCTGAACTGGGGCAACAGCCTGCAGATCC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGGCTGGAGGGTAGCCTaGGCGCAGCTCAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGGWRVA*AQLNLV
Trigger: GACCAGGTTGAGCTGCGCGCAGGCTACCCTCCAGCC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGGCTGGAGGGTAGCCTaGGCGCAGCTCAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPGWRVA*AQLNLV
Trigger: GACCAGGTTGAGCTGCGCGCAGGCTACCCTCCAGCC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCCTGGCTTCTCCACGCTaGGGCTTGTGGCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPLASPR*GLWRSS
Trigger: TGAGCTGCGCCACAAGCCGCAGCGTGGAGAAGCCAG...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGCAGGGGCCAGCGGATaGAGCGTATCTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSAGASG*SVSAGC
Trigger: ACACCCTGCAGATACGCTGCATCCGCTGGCCCCTGC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGCAGGGGCCAGCGGATaGAGCGTATCTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSAGASG*SVSAGC
Trigger: ACACCCTGCAGATACGCTGCATCCGCTGGCCCCTGC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGGGTCCAGCTGCCTCTaGCGCCACCATGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRGSSCL*RHHVSS
Trigger: ACTGGACACATGGTGGCGGCAGAGGCAGCTGGACCC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCTCCTCCAGGTCTTGTTaGTATTGCTCGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPSSRSC*YCSRWG
Trigger: CCCCCAGCGCGAGCAATAGCAACAAGACCTGGAGGA...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCGGGGGCTGGGGATTaGAACACCTTCCGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPPGAGD*NTFRAS
Trigger: GGAGGCTCGGAAGGTGTTGCAATCCCCAGCCCCCGG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR GCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCCTCTGGCCCAGCCCCTaGTTGGCCTCCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPLWPSP*LASLVS
Trigger: AGAGACCAAGGAGGCCAAGCAGGGGCTGGGCCAGAG...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCGGCTCCGGGTCCAGATaGCTGCAGTTCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPGSGSR*LQFCLM
Trigger: CATCAAGCAGAACTGCAGCCATCTGGACCCGGAGCC...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGCGCGCAGCTCAACCTaGTCCAGGATCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPARSST*SRICRL
Trigger: CAGCCTGCAGATCCTGGACCAGGTTGAGCTGCGCGC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGCGCGCAGCTCAACCTaGTCCAGGATCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSARSST*SRICRL
Trigger: CAGCCTGCAGATCCTGGACCAGGTTGAGCTGCGCGC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGTTGTGGGGTATGGCTaGAGGGTAGCCTGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRVVGYG*RVACAQ
Trigger: CTGCGCGCAGGCTACCCTCCAGCCATACCCCACAAC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGTTGTGGGGTATGGCTaGAGGGTAGCCTGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSVVGYG*RVACAQ
Trigger: CTGCGCGCAGGCTACCCTCCAGCCATACCCCACAAC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGGTCCTGGCTCCCACTaGCAGATGAGGCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGGPGSH*QMRLLV
Trigger: AACCAGCAGCCTCATCTGCCAGTGGGAGCCAGGACC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCGTGGGATGCAGCAGTaGCTCTGCCCGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPRGMQQ*LCPSLG
Trigger: GCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGCAGGGTGTAGGCCGTaGCTGGGAGGAGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRAGCRP*LGGARR
Trigger: TCTGCGGGCTCCTCCCAGCCACGGCCTACACCCTGC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCTTCCTCCAGGGGCACTaGCTTCCAGAACAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPFLQGH*LPEQLH
Trigger: GTGCAGCTGTTCTGGAAGCCAGTGCCCCTGGAGGAA...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCAGAAGACCACCGGAGTaGGACGAGAGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSRRPPE*DERSRL
Trigger: CAGCCGGGACCTCTCGTCCCACTCCGGTGGTCTTCT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCAGAAGACCACCGGAGTaGGACGAGAGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSRRPPE*DERSRL
Trigger: CAGCCGGGACCTCTCGTCCCACTCCGGTGGTCTTCT...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGAGGGTCTCGGGCCATaGCATGGAGTCTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGEGLGP*HGVWSE
Trigger: CTCTGACCAGACTCCATGCCATGGCCCGAGACCCTC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCTGAGGCCATGGATTaGGGGGCTCCCAGCCTACCC +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVPEAMD*GAPSLP
Trigger: GGGTAGGCTGGGAGCCCCCCAATCCATGGCCTCAGG...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGAGGCCATGGATTaGGGGGCTCCCAGCCTACCC +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSPEAMD*GAPSLP
Trigger: GGGTAGGCTGGGAGCCCCCCAATCCATGGCCTCAGG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGGACTGTACTGTTGGTaGCCCCAGCCTGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRGLYCW*PQPGWQ
Trigger: CTGCCAGCCAGGCTGGGGCCACCAACAGTACAGTCC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGGACTGTACTGTTGGTaGCCCCAGCCTGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSGLYCW*PQPGWQ
Trigger: CTGCCAGCCAGGCTGGGGCCACCAACAGTACAGTCC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGCTGTGAGCTGGGTCTaGGACACTTGGCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSAVSWV*DTWPEG
Trigger: CCCCTCTGGCCAAGTGTCCCAGACCCAGCTCACAGC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCCAAGGCCGGGCAGCTaGAAGGCATCCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSPRPGS*KASSSM
Trigger: CATGGAGGAGGATGCCTTCCAGCTGCCCGGCCTTGG...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGAGCTTGGTGATGGGTaGCGTGCCAAGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGELGDG*RAKAGQ
Trigger: CTGCCCGGCCTTGGCACGCCACCCATCACCAAGCTC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCGTGCCAGACTGGGATTaGGGCTGGGTGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPVPDWD*GWVETA
Trigger: AGCAGTTTCCACCCAGCCCCAATCCCAGTCTGGCAC...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGATAGTGCCCTGGCCCTaGGCTTGTGGGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSIVPWP*ACGAAQ
Trigger: CTGGGCAGCCCCACAAGCCCAGGGCCAGGGCACTAT...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTATAGTGCCCTGGCCCTaGGCTTGTGGGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPIVPWP*ACGAAQ
Trigger: CTGGGCAGCCCCACAAGCCCAGGGCCAGGGCACTAT...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCATAGTGCCCTGGCCCTaGGCTTGTGGGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVIVPWP*ACGAAQ
Trigger: CTGGGCAGCCCCACAAGCCCAGGGCCAGGGCACTAT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCCTCCTGGCTTGGGGCTaGGGTTACCAGGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPLLAWG*GYQGPQ
Trigger: TTGGGGACCCTGGTAACCCCAGCCCCAAGCCAGGAG...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGTCGTCCTCCTGGCTTaGGGCTGGGGTTACCAGGGT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRVVLLA*GWGYQG
Trigger: ACCCTGGTAACCCCAGCCCCAAGCCAGGAGGACGAC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCAGCGCCTCCATCCCATaGACCCGGATCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVSASIP*TRIPCR
Trigger: CCTGCAGGGGATCCGGGTCCATGGGATGGAGGCGCT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGAGGCAGGCCCTGGCTaGAAGGCTCACCCGGCCCTA +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCREAGPG*KAHPAL
Trigger: TAGGGCCGGGTGAGCCTTCCAGCCAGGGCCTGCCTC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR TCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGTGGACGATGGGGGCTaGGACACTGATGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVVDDGG*DTDVPA
Trigger: TGCGGGCACATCAGTGTCTCAGCCCCCATCGTCCAC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGTGGACGATGGGGGCTaGGACACTGATGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGVDDGG*DTDVPA
Trigger: TGCGGGCACATCAGTGTCTCAGCCCCCATCGTCCAC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACCGCAGAGCTCATACTaGAGGGCCTCCAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGPQSSY*RASKGR
Trigger: CCTCCCCTTGGAGGCCCTTCAGTATGAGCTCTGCGG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAACCATGTGTCCAGTCTaGCAGTGGGGGCCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGTMCPV*QWGPVR
Trigger: CCGAACGGGCCCCCACTGTCAGACTGGACACATGGT...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTGGGCCTCTGCTTTCTaGGAAGACCACCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSWASAF*EDHRSG
Trigger: CCCACTCCGGTGGTCTTCTCAGAAAGCAGAGGCCCA...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGCCATGAGGTGGATGTaGTACAGACTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRAMRWM*YRLAGS
Trigger: GGAGCCCGCCAGTCTGTATCACATCCACCTCATGGC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGCCATGAGGTGGATGTaGTACAGACTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPAMRWM*YRLAGS
Trigger: GGAGCCCGCCAGTCTGTATCACATCCACCTCATGGC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGCCATGAGGTGGATGTaGTACAGACTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSAMRWM*YRLAGS
Trigger: GGAGCCCGCCAGTCTGTATCACATCCACCTCATGGC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTTCCACAGAGGCAGGTaGGCAACAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRFHRGR*ATAGGR
Trigger: TCGGCCTCCTGCTGTTGCTCACCTGCCTCTGTGGAA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTCCACAGAGGCAGGTaGGCAACAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSFHRGR*ATAGGR
Trigger: TCGGCCTCCTGCTGTTGCTCACCTGCCTCTGTGGAA...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGCAGGAGGGGGAAGTTaGGCAGTGGCCCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSAGGGS*AVAQRH
Trigger: GTGTCTTTGGGCCACTGCTCAACTTCCCCCTCCTGC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGCAGGAGGGGGAAGTTaGGCAGTGGCCCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRAGGGS*AVAQRH
Trigger: GTGTCTTTGGGCCACTGCTCAACTTCCCCCTCCTGC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACGGGCAGCTCCTCCATaGTTGTGGGCACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRRAAPP*LWAPRS
Trigger: GCTCCTGGGTGCCCACAATCATGGAGGAGCTGCCCG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAACAGACGCTGCTGCCTaGCCCCGGGCTGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRTDAAA*PRAEAL
Trigger: CAGAGCTTCAGCCCGGGGGCAGGCAGCAGCGTCTGT...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGGATCTGCAGGCTGTTaGCCCAGTTCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPGSAGC*PSSGSR
Trigger: CCTGCTGCCTGAACTGGGGCAACAGCCTGCAGATCC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCACCTGGTCCAGGATCTaGAGGCTGTTGCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGTWSRI*RLLPQF
Trigger: GAACTGGGGCAACAGCCTGCAGATCCTGGACCAGGT...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCTGGCTTCTCCACGCTaGGGCTTGTGGCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPLASPR*GLWRSS
Trigger: TGAGCTGCGCCACAAGCCGCAGCGTGGAGAAGCCAG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTGGCTTCTCCACGCTaGGGCTTGTGGCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVLASPR*GLWRSS
Trigger: TGAGCTGCGCCACAAGCCGCAGCGTGGAGAAGCCAG...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGCAGGGGCCAGCGGATaGAGCGTATCTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVAGASG*SVSAGC
Trigger: ACACCCTGCAGATACGCTGCATCCGCTGGCCCCTGC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGGGGCTGGGTGGAAACTaGTCTTGGGTCCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSGLGGN*SWVPLE
Trigger: CTCCAGGGGGACCCAAGAGCAGTTTCCACCCAGCCC...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGGACCTGATCGCTGGTaGCAGACTGGGATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPGPDRW*QTGIGA
Trigger: AGCCCCAATCCCAGTCTGGCACCAGCGATCAGGTCC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGGACCTGATCGCTGGTaGCAGACTGGGATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRGPDRW*QTGIGA
Trigger: AGCCCCAATCCCAGTCTGGCACCAGCGATCAGGTCC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGGACCTGATCGCTGGTaGCAGACTGGGATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSGPDRW*QTGIGA
Trigger: AGCCCCAATCCCAGTCTGGCACCAGCGATCAGGTCC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCTGGGCTTGTGGGGCTaGCCAGCAGCTGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRLGLWG*PAAAHK
Trigger: TTTATGGGCAGCTGCTGGGCAGCCCCACAAGCCCAG...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCATGGGATCCCCCAGGTaGACGATGGGGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPMGSPR*TMGAET
Trigger: TGTCTCAGCCCCCATCGTCCACCTGGGGGATCCCAT...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGAGAGGTTGTGGGGTATaGCTGGAGGGTAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRRGCGV*LEGSLR
Trigger: GCGCAGGCTACCCTCCAGCCATACCCCACAACCTCT...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGAAGCTGGTGGGTAGGTaGGTCTCAGGTCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRKLVGR*VSGPGS
Trigger: GGAGCCAGGACCTGAGACCCACCTACCCACCAGCTT...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGCACGCAGTCCAGGATaGAGTCCCCTTGGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRARSPG*SPLGSD
Trigger: GTCAGACCCAAGGGGACTCCATCCTGGACTGCGTGC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACGTGGGATGCAGCAGTaGCTCTGCCCGTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRRGMQQ*LCPSLG
Trigger: GCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCTGTAGGCAGCCTGCCTaGGGAGGGGCCGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSCRQPA*GGAASG
Trigger: CCCTGAAGCGGCCCCTCCCCAGGCAGGCTGCCTACA...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCATTTATGTGCAGGCCTaGCTGCCATGGCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPIYVQA*LPWLPA
Trigger: TGCTGGGAGCCATGGCAGCCAGGCCTGCACATAAAT...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACCACCAGTGCCCAGCTaGCTTCTCCACGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRPPVPS*LLHAAA
Trigger: AGCCGCAGCGTGGAGAAGCCAGCTGGGCACTGGTGG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCAGGATGGCCCCAGCCTaGCCTGAGGGTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSRMAPA*PEGLQE
Trigger: TTCTTGGAGACCCTCAGGCCAGGCTGGGGCCATCCT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCACAAGGGCCACCTCCTaGGCTTCTGAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPTRATS*ASEGRW
Trigger: CCACCTGCCTTCAGAAGCCCAGGAGGTGGCCCTTGT...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGAGGGTCTCGGGCCATaGCATGGAGTCTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGREGLGP*HGVWSE
Trigger: CTCTGACCAGACTCCATGCCATGGCCCGAGACCCTC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGAGGGTCTCGGGCCATaGCATGGAGTCTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSEGLGP*HGVWSE
Trigger: CTCTGACCAGACTCCATGCCATGGCCCGAGACCCTC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGCTGGGAGGGTCCCATaGTGTCCTGGTACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSAGRVP*CPGTRE
Trigger: CTCCCTTGTACCAGGACACCATGGGACCCTCCCAGC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATTGGTGGCCCCAGCCTaGCTGGCAGCCATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRLVAPA*LAAMRW
Trigger: CCACCTCATGGCTGCCAGCCAGGCTGGGGCCACCAA...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGCTGTGAGCTGGGTCTaGGACACTTGGCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPAVSWV*DTWPEG
Trigger: CCCCTCTGGCCAAGTGTCCCAGACCCAGCTCACAGC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCAAGGCCGGGCAGCTaGAAGGCATCCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVPRPGS*KASSSM
Trigger: CATGGAGGAGGATGCCTTCCAGCTGCCCGGCCTTGG...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGAGCTTGGTGATGGGTaGCGTGCCAAGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRELGDG*RAKAGQ
Trigger: CTGCCCGGCCTTGGCACGCCACCCATCACCAAGCTC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCAGGTCTGGACCAGAGTaGGGAGGCCACAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSRSGPE*GGHRSL
Trigger: CAGAGACCTGTGGCCTCCCCACTCTGGTCCAGACCT...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGAGGTCTGGACCAGAGTaGGGAGGCCACAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRRSGPE*GGHRSL
Trigger: CAGAGACCTGTGGCCTCCCCACTCTGGTCCAGACCT...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGGGATTGGGGCTGGGTaGAAACTGCTCTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPGIGAG*KLLLGP
Trigger: GGGACCCAAGAGCAGTTTCCACCCAGCCCCAATCCC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGGGATTGGGGCTGGGTaGAAACTGCTCTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSGIGAG*KLLLGP
Trigger: GGGACCCAAGAGCAGTTTCCACCCAGCCCCAATCCC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGTGCCAGACTGGGATTaGGGCTGGGTGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGVPDWD*GWVETA
Trigger: AGCAGTTTCCACCCAGCCCCAATCCCAGTCTGGCAC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTCGCTGGTGCCAGACTaGGATTGGGGCTGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRSLVPD*DWGWVE
Trigger: TTCCACCCAGCCCCAATCCCAGTCTGGCACCAGCGA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCAGCACAAAAGGCCATTaGGTGGGGCTGGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPSTKGH*VGLDGA
Trigger: TGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCT...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCAAAGGACCTGATCGCTaGTGCCAGACTGGGATTGGG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPKGPDR*CQTGIG
Trigger: CCCAATCCCAGTCTGGCACCAGCGATCAGGTCCTTT...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGCGGAGATAGTGCCCTaGCCCTGGGCTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWAEIVP*PWACGA
Trigger: AGCCCCACAAGCCCAGGGCCAGGGCACTATCTCCGC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGTCGTCCTCCTGGCTTaGGGCTGGGGTTACCAGGGT +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGVVLLA*GWGYQG
Trigger: ACCCTGGTAACCCCAGCCCCAAGCCAGGAGGACGAC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGTCGTCCTCCTGGCTTaGGGCTGGGGTTACCAGGGT +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPVVLLA*GWGYQG
Trigger: ACCCTGGTAACCCCAGCCCCAAGCCAGGAGGACGAC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAAGCGCCTCCATCCCATaGACCCGGATCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRSASIP*TRIPCR
Trigger: CCTGCAGGGGATCCGGGTCCATGGGATGGAGGCGCT...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCAGGCTCCCACCTGGCTaGGTGCCATCCTTATGCCCC +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVRLPPG*VPSLCP
Trigger: GGGGCATAAGGATGGCACCCAGCCAGGTGGGAGCCT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGGCCCAGCCCCTGCTTaGCCTCCTTGGTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGGPAPA*PPWSLF
Trigger: GAAGAGAGACCAAGGAGGCCAAGCAGGGGCTGGGCC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGGCCCAGCCCCTGCTTaGCCTCCTTGGTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPGPAPA*PPWSLF
Trigger: GAAGAGAGACCAAGGAGGCCAAGCAGGGGCTGGGCC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCTCAGTTTCCCCATGTTaGCACCTCTGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPSVSPC*HLWPSP
Trigger: GGGGCTGGGCCAGAGGTGCCAACATGGGGAAACTGA...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCTGCAGCTCTGGGGCATaGGAGGGAGCCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSCSSGA*EGAFSR
Trigger: TCTGCTGAAGGCTCCCTCCCATGCCCCAGAGCTGCA...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464465.6
CDS-3UTR TCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAACCATGTGTCCAGTCTaGCAGTGGGGGCCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRTMCPV*QWGPVR
Trigger: CCGAACGGGCCCCCACTGTCAGACTGGACACATGGT...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGGCCCCAGCCTGGCCTaGGGGTCTCCAAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSGPSLA*GSPRNH
Trigger: GTGGTTTCTTGGAGACCCTCAGGCCAGGCTGGGGCC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGGTGGAAGGTGCAGCTaGGCTCTGTGGTGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSGGRCS*ALWCCR
Trigger: TCTGCAACACCACAGAGCTCAGCTGCACCTTCCACC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAACGAGAGGTCCCGGCTaGGTTATAGGCCACAAGGGC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGTRGPG*VIGHKG
Trigger: GCCCTTGTGGCCTATAACTCAGCCGGGACCTCTCGT...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTACGAGAGGTCCCGGCTaGGTTATAGGCCACAAGGGC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPTRGPG*VIGHKG
Trigger: GCCCTTGTGGCCTATAACTCAGCCGGGACCTCTCGT...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTTGGGCCTCTGCTTTCTaGGAAGACCACCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPWASAF*EDHRSG
Trigger: CCCACTCCGGTGGTCTTCTCAGAAAGCAGAGGCCCA...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGCCATGAGGTGGATGTaGTACAGACTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGAMRWM*YRLAGS
Trigger: GGAGCCCGCCAGTCTGTATCACATCCACCTCATGGC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCTCAAGGTCATCAGGGTaGGGACTGTACTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPSRSSG*GLYCWW
Trigger: CCACCAACAGTACAGTCCTCACCCTGATGACCTTGA...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCGAACAGGCCCAGGATaGTGTGTAGCTCCGACCCCT +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSRTGPG*CVAPTP
Trigger: AGGGGTCGGAGCTACACATCATCCTGGGCCTGTTCG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCTTCCACAGAGGCAGGTaGGCAACAGCAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVFHRGR*ATAGGR
Trigger: TCGGCCTCCTGCTGTTGCTCACCTGCCTCTGTGGAA...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGAGGCATCCTCCTCCATaGTTGTGGGCACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSRHPPP*LWAPRS
Trigger: GCTCCTGGGTGCCCACAATCATGGAGGAGGATGCCT...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCAGCCCAAGTCAGGCTaGAGTTTCCCAGCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRQPKSG*SFPALP
Trigger: TGGCAAGGCTGGGAAACTGCAGCCTGACTTGGGCTG...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGGGATCTGCAGGCTGTTaGCCCAGTTCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSGSAGC*PSSGSR
Trigger: CCTGCTGCCTGAACTGGGGCAACAGCCTGCAGATCC...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGACCTGGTCCAGGATCTaGAGGCTGTTGCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRTWSRI*RLLPQF
Trigger: GAACTGGGGCAACAGCCTGCAGATCCTGGACCAGGT...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCACCTGGTCCAGGATCTaGAGGCTGTTGCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSTWSRI*RLLPQF
Trigger: GAACTGGGGCAACAGCCTGCAGATCCTGGACCAGGT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGGTGTTTGCGTGGGATaGAGCAGTGGCTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGGVCVG*SSGSAR
Trigger: ACGGGCAGAGCCACTGCTGCATCCCACGCAAACACC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCCCAGCGCATTCTCTaGCTGCACCCAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVPQRIL*LHPDAH
Trigger: ATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGG...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCTCAGAGCTGGGCCTCTaGTTTCTGAGAAGACCACCG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGSELGL*FLRRPP
Trigger: CGGTGGTCTTCTCAGAAAGCAGAGGCCCAGCTCTGA...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCTCCTCCAGGTCTTGTTaGTATTGCTCGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSSSRSC*YCSRWG
Trigger: CCCCCAGCGCGAGCAATAGCAACAAGACCTGGAGGA...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTCCTCCAGGTCTTGTTaGTATTGCTCGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSSSRSC*YCSRWG
Trigger: CCCCCAGCGCGAGCAATAGCAACAAGACCTGGAGGA...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCACCCACTCCAGCTGTaGCCAGGTCTTGCCAATGTG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSHPLQL*PGLANV
Trigger: CACATTGGCAAGACCTGGGCACAGCTGGAGTGGGTG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACTGGGCTTGTGGGGCTaGCCAGCAGCTGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGLGLWG*PAAAHK
Trigger: TTTATGGGCAGCTGCTGGGCAGCCCCACAAGCCCAG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCTGGGCTTGTGGGGCTaGCCAGCAGCTGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPLGLWG*PAAAHK
Trigger: TTTATGGGCAGCTGCTGGGCAGCCCCACAAGCCCAG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCCCACCTGGCTGGGTaGCATCCTTATGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRSHLAG*HPYAPC
Trigger: GCAGGGGGCATAAGGATGGCACCCAGCCAGGTGGGA...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACCCGGGCAGCCTTCCTaGCTTGGGGGTCTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRPGQPS*LGGLKG
Trigger: CCCTTTAAGACCCCCAAGGCAGGAAGGCTGCCCGGG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACTCTGGCCCAGCCCCTaGTTGGCCTCCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRLWPSP*LASLVS
Trigger: AGAGACCAAGGAGGCCAAGCAGGGGCTGGGCCAGAG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTATGGGATCCCCCAGGTaGACGATGGGGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPMGSPR*TMGAET
Trigger: TGTCTCAGCCCCCATCGTCCACCTGGGGGATCCCAT...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAATGGGATCCCCCAGGTaGACGATGGGGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGMGSPR*TMGAET
Trigger: TGTCTCAGCCCCCATCGTCCACCTGGGGGATCCCAT...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGGCTCCGGGTCCAGATaGCTGCAGTTCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSGSGSR*LQFCLM
Trigger: CATCAAGCAGAACTGCAGCCATCTGGACCCGGAGCC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCTCTCCACAGAATCTGTaGCTCCGGGTCCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGSPQNL*LRVQMA
Trigger: AGCCATCTGGACCCGGAGCCACAGATTCTGTGGAGA...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGTTGTGGGGTATGGCTaGAGGGTAGCCTGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWVVGYG*RVACAQ
Trigger: CTGCGCGCAGGCTACCCTCCAGCCATACCCCACAAC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAAGAGGTTGTGGGGTATaGCTGGAGGGTAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGRGCGV*LEGSLR
Trigger: GCGCAGGCTACCCTCCAGCCATACCCCACAACCTCT...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGGTCCTGGCTCCCACTaGCAGATGAGGCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGGPGSH*QMRLLV
Trigger: AACCAGCAGCCTCATCTGCCAGTGGGAGCCAGGACC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGCACGCAGTCCAGGATaGAGTCCCCTTGGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGARSPG*SPLGSD
Trigger: GTCAGACCCAAGGGGACTCCATCCTGGACTGCGTGC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGCACGCAGTCCAGGATaGAGTCCCCTTGGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPARSPG*SPLGSD
Trigger: GTCAGACCCAAGGGGACTCCATCCTGGACTGCGTGC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGGCTCTGCCCGTCCTTaGGCACGCAGTCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSGSARP*ARSPGW
Trigger: CCATCCTGGACTGCGTGCCCAAGGACGGGCAGAGCC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCAGCAGGTGTTTGCGTaGGATGCAGCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRQQVFA*DAAVAL
Trigger: CAGAGCCACTGCTGCATCCCACGCAAACACCTGCTG...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCATGGTCCGCAGCATaGGGGGCTCCAGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRPWSAA*GAPVSQ
Trigger: TTGTGAAACTGGAGCCCCCCATGCTGCGGACCATGG...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCCATGGTCCGCAGCATaGGGGGCTCCAGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSPWSAA*GAPVSQ
Trigger: TTGTGAAACTGGAGCCCCCCATGCTGCGGACCATGG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCACAAGGGCCACCTCCTaGGCTTCTGAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVTRATS*ASEGRW
Trigger: CCACCTGCCTTCAGAAGCCCAGGAGGTGGCCCTTGT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAACAAGGGCCACCTCCTaGGCTTCTGAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGTRATS*ASEGRW
Trigger: CCACCTGCCTTCAGAAGCCCAGGAGGTGGCCCTTGT...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACCATGGCATGGAGTCTaGTCAGAGCTGGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGPWHGV*SELGLC
Trigger: GCAGAGGCCCAGCTCTGACCAGACTCCATGCCATGG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGAGGGTCTCGGGCCATaGCATGGAGTCTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGEGLGP*HGVWSE
Trigger: CTCTGACCAGACTCCATGCCATGGCCCGAGACCCTC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCTCAGCAGAAACCCCGTaGCTCTCCCATTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPSAETP*LSHSVP
Trigger: TGGAACAGAATGGGAGAGCCACGGGGTTTCTGCTGA...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGCTGGGAGGGTCCCATaGTGTCCTGGTACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVAGRVP*CPGTRE
Trigger: CTCCCTTGTACCAGGACACCATGGGACCCTCCCAGC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGGACTGTACTGTTGGTaGCCCCAGCCTGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWGLYCW*PQPGWQ
Trigger: CTGCCAGCCAGGCTGGGGCCACCAACAGTACAGTCC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGGGGATTCTTCCTGTTaGGGCTGCAACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSGDSSC*GCNRAR
Trigger: CCTGGCTCTGTTGCAGCCCCAACAGGAAGAATCCCC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGGTCTCTGAGCTGTTATaGGACTCCCAGGGCACCGGC +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSVSELL*DSQGTG
Trigger: GCCGGTGCCCTGGGAGTCCCATAACAGCTCAGAGAC...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGTCTCTGAGCTGTTATaGGACTCCCAGGGCACCGGC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPVSELL*DSQGTG
Trigger: GCCGGTGCCCTGGGAGTCCCATAACAGCTCAGAGAC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTAGGTCTGGACCAGAGTaGGGAGGCCACAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPRSGPE*GGHRSL
Trigger: CAGAGACCTGTGGCCTCCCCACTCTGGTCCAGACCT...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGGGGATTGGGGCTGGGTaGAAACTGCTCTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSGIGAG*KLLLGP
Trigger: GGGACCCAAGAGCAGTTTCCACCCAGCCCCAATCCC...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGTCGCTGGTGCCAGACTaGGATTGGGGCTGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSSLVPD*DWGWVE
Trigger: TTCCACCCAGCCCCAATCCCAGTCTGGCACCAGCGA...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGCCATTGGGTGGGGCTaGATGGAGCATGATCTGGTC +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSAIGWG*MEHDLV
Trigger: GACCAGATCATGCTCCATCCAGCCCCACCCAATGGC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATAGTGCCCTGGCCCTaGGCTTGTGGGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSIVPWP*ACGAAQ
Trigger: CTGGGCAGCCCCACAAGCCCAGGGCCAGGGCACTAT...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAAGAGGGGCTGAGTaGAGTCACAGCGGAGATAGT +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGPRGAE*SHSGDS
Trigger: ACTATCTCCGCTGTGACTCCACTCAGCCCCTCTTGG...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACTCCTGGCTTGGGGCTaGGGTTACCAGGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRLLAWG*GYQGPQ
Trigger: TTGGGGACCCTGGTAACCCCAGCCCCAAGCCAGGAG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCTCCTGGCTTGGGGCTaGGGTTACCAGGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWLLAWG*GYQGPQ
Trigger: TTGGGGACCCTGGTAACCCCAGCCCCAAGCCAGGAG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCAGCGCCTCCATCCCATaGACCCGGATCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSSASIP*TRIPCR
Trigger: CCTGCAGGGGATCCGGGTCCATGGGATGGAGGCGCT...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCAGTATGCAGATCGCCTaGGAGGCCCAGCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSSMQIA*EAQPME
Trigger: CTCCATAGGCTGGGCCTCCCAGGCGATCTGCATACT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCAGTATGCAGATCGCCTaGGAGGCCCAGCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSSMQIA*EAQPME
Trigger: CTCCATAGGCTGGGCCTCCCAGGCGATCTGCATACT...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTTTATGCCCCCTGCCCTaGGGGAGCATCACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPLCPLP*GSITWR
Trigger: CCTCCAAGTGATGCTCCCCCAGGGCAGGGGGCATAA...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGACAGGCCCGGGGGCTaGGGATTGCAACACCTTCCG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSDRPGG*GLQHLP
Trigger: CGGAAGGTGTTGCAATCCCCAGCCCCCGGGCCTGTC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGTCAGTTTCCCCATGTTaGCACCTCTGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSSVSPC*HLWPSP
Trigger: GGGGCTGGGCCAGAGGTGCCAACATGGGGAAACTGA...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCAAGGCCGGGCAGCTaGAAGGCATCCTGCACACAA +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSPRPGS*KASCTQ
Trigger: TTGTGTGCAGGATGCCTTCCAGCTGCCCGGCCTTGG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR TCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCTGGGGGCTGAGACACTaGTGTGCCCGCACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSWGLRH*CARTPP
Trigger: TGGAGGAGTGCGGGCACATCAGTGTCTCAGCCCCCA...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGCAGCTCACACTTCTaGTTTATGTGCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRRSSHF*FMCRPG
Trigger: GCCAGGCCTGCACATAAATCAGAAGTGTGAGCTGCG...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTGGGCCTCTGCTTTCTaGGAAGACCACCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWWASAF*EDHRSG
Trigger: CCCACTCCGGTGGTCTTCTCAGAAAGCAGAGGCCCA...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATGGGCCTCTGCTTTCTaGGAAGACCACCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRWASAF*EDHRSG
Trigger: CCCACTCCGGTGGTCTTCTCAGAAAGCAGAGGCCCA...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGCTGGCAGCCATaGGGTGGATGTGATACAGAC +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSPGWQP*GGCDTD
Trigger: GTCTGTATCACATCCACCTCATGGCTGCCAGCCAGG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCTGGCTGGCAGCCATaGGGTGGATGTGATACAGAC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPPGWQP*GGCDTD
Trigger: GTCTGTATCACATCCACCTCATGGCTGCCAGCCAGG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCGAACAGGCCCAGGATaGTGTGTAGCTCCGACCCCT +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWRTGPG*CVAPTP
Trigger: AGGGGTCGGAGCTACACATCATCCTGGGCCTGTTCG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGCAGGAGGGGGAAGTTaGGCAGTGGCCCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWAGGGS*AVAQRH
Trigger: GTGTCTTTGGGCCACTGCTCAACTTCCCCCTCCTGC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGCAGGAGGGGGAAGTTaGGCAGTGGCCCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRAGGGS*AVAQRH
Trigger: GTGTCTTTGGGCCACTGCTCAACTTCCCCCTCCTGC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCACAAGGATGTGGGGTaGGAGCACGGCTCATTTCAG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRHKDVG*EHGSFQ
Trigger: CTGAAATGAGCCGTGCTCTCACCCCACATCCTTGTG...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGCTGAGACACTGATGTaGCCGCACTCCTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRAETLM*PHSSRL
Trigger: AAGTCTGGAGGAGTGCGGGCACATCAGTGTCTCAGC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGCTGAGACACTGATGTaGCCGCACTCCTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSAETLM*PHSSRL
Trigger: AAGTCTGGAGGAGTGCGGGCACATCAGTGTCTCAGC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGGTGTTTGCGTGGGATaGAGCAGTGGCTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWGVCVG*SSGSAR
Trigger: ACGGGCAGAGCCACTGCTGCATCCCACGCAAACACC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCACAACAGCAGGTGTTTaGGTGGGATGCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPTTAGV*VGCSSG
Trigger: GCCACTGCTGCATCCCACGCAAACACCTGCTGTTGT...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACCCCAGCGCATTCTCTaGCTGCACCCAGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRPQRIL*LHPDAH
Trigger: ATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGGGTCCAGCTGCCTCTaGCGCCACCATGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSGSSCL*RHHVSS
Trigger: ACTGGACACATGGTGGCGGCAGAGGCAGCTGGACCC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTCAGAGCTGGGCCTCTaGTTTCTGAGAAGACCACCG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRSELGL*FLRRPP
Trigger: CGGTGGTCTTCTCAGAAAGCAGAGGCCCAGCTCTGA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCCAGGTCTTGCCAATGTaGTTTAGATGCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPQVLPM*FRCSSG
Trigger: CCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTG...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTCTTCCTGTTGGGGCTaGAACAGAGCCAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSSSCWG*NRARQF
Trigger: GAACTGCCTGGCTCTGTTGCAGCCCCAACAGGAAGA...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCTGGTCCTTAAAGTATaGAGATCGCCTGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSLVLKV*RSPGRP
Trigger: GGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCCTGGTCCTTAAAGTATaGAGATCGCCTGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPLVLKV*RSPGRP
Trigger: GGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAG...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTGGTCCTTAAAGTATaGAGATCGCCTGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSLVLKV*RSPGRP
Trigger: GGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAG...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCTGGGCTTGTGGGGCTaGCCAGCAGCTGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWLGLWG*PAAAHK
Trigger: TTTATGGGCAGCTGCTGGGCAGCCCCACAAGCCCAG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCATCCTTATGCCCCCTaGCCTGGGGGAGCATCACTT +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVHPYAP*PGGASL
Trigger: AAGTGATGCTCCCCCAGGGCAGGGGGCATAAGGATG...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR GCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGTTCCTGAAACCAGCTaGAGTCCAGCTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPVPETS*SPASLP
Trigger: GGGGAGAGAAGCTGGACTGCAGCTGGTTTCAGGAAC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCAGCAGGTGTTTGCGTaGGATGCAGCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPQQVFA*DAAVAL
Trigger: CAGAGCCACTGCTGCATCCCACGCAAACACCTGCTG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGTTGTGGGGACATGCTaGTCCCCAGCGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPVVGTC*SPAHSL
Trigger: CAGAGAATGCGCTGGGGACCAGCATGTCCCCACAAC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGTTGTGGGGACATGCTaGTCCCCAGCGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVVVGTC*SPAHSL
Trigger: CAGAGAATGCGCTGGGGACCAGCATGTCCCCACAAC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGTTGTGGGGACATGCTaGTCCCCAGCGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGVVGTC*SPAHSL
Trigger: CAGAGAATGCGCTGGGGACCAGCATGTCCCCACAAC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCATTTATGTGCAGGCCTaGCTGCCATGGCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSIYVQA*LPWLPA
Trigger: TGCTGGGAGCCATGGCAGCCAGGCCTGCACATAAAT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGATTCCTCCAGGGGCACTaGCTTCCAGAACAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGFLQGH*LPEQLH
Trigger: GTGCAGCTGTTCTGGAAGCCAGTGCCCCTGGAGGAA...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGAGGATGGCCCCAGCCTaGCCTGAGGGTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWRMAPA*PEGLQE
Trigger: TTCTTGGAGACCCTCAGGCCAGGCTGGGGCCATCCT...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGCTTCTGAAGGCAGGTaGAAGGTGCAGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPASEGR*KVQLSS
Trigger: AGAGCTCAGCTGCACCTTCCACCTGCCTTCAGAAGC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACCATGGCATGGAGTCTaGTCAGAGCTGGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRPWHGV*SELGLC
Trigger: GCAGAGGCCCAGCTCTGACCAGACTCCATGCCATGG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCTCAGCAGAAACCCCGTaGCTCTCCCATTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGSAETP*LSHSVP
Trigger: TGGAACAGAATGGGAGAGCCACGGGGTTTCTGCTGA...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGGTCCCATGGTGTCCTaGTACAAGGGAGTCACGATG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSGPMVS*YKGVTM
Trigger: CATCGTGACTCCCTTGTACCAGGACACCATGGGACC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGCTGGGAGGGTCCCATaGTGTCCTGGTACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRAGRVP*CPGTRE
Trigger: CTCCCTTGTACCAGGACACCATGGGACCCTCCCAGC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGGGGGATTCTTCCTGTTaGGGCTGCAACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSGDSSC*GCNRAR
Trigger: CCTGGCTCTGTTGCAGCCCCAACAGGAAGAATCCCC...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGGGGATTCTTCCTGTTaGGGCTGCAACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVGDSSC*GCNRAR
Trigger: CCTGGCTCTGTTGCAGCCCCAACAGGAAGAATCCCC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGGGGATTCTTCCTGTTaGGGCTGCAACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPGDSSC*GCNRAR
Trigger: CCTGGCTCTGTTGCAGCCCCAACAGGAAGAATCCCC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTGGGTCTGGGACACTTaGCCAGAGGGGATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRWVWDT*PEGILP
Trigger: AGGAAGAATCCCCTCTGGCCAAGTGTCCCAGACCCA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCCCAAGGCCGGGCAGCTaGAAGGCATCCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSPRPGS*KASSSM
Trigger: CATGGAGGAGGATGCCTTCCAGCTGCCCGGCCTTGG...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGGTGGAAACTGCTCTTaGGTCCCCCTGGAGCACATA +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSGGNCS*VPLEHI
Trigger: TATGTGCTCCAGGGGGACCCAAGAGCAGTTTCCACC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGGTGGAAACTGCTCTTaGGTCCCCCTGGAGCACATA +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPGGNCS*VPLEHI
Trigger: TATGTGCTCCAGGGGGACCCAAGAGCAGTTTCCACC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGGTGGAAACTGCTCTTaGGTCCCCCTGGAGCACATA +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSGGNCS*VPLEHI
Trigger: TATGTGCTCCAGGGGGACCCAAGAGCAGTTTCCACC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGTGCCAGACTGGGATTaGGGCTGGGTGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVVPDWD*GWVETA
Trigger: AGCAGTTTCCACCCAGCCCCAATCCCAGTCTGGCAC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGCTGGTGCCAGACTaGGATTGGGGCTGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWSLVPD*DWGWVE
Trigger: TTCCACCCAGCCCCAATCCCAGTCTGGCACCAGCGA...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCTTGGGTGGGGCTGGATaGAGCATGATCTGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGLGGAG*SMIWSL
Trigger: TAAGGACCAGATCATGCTCCATCCAGCCCCACCCAA...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGCCATTGGGTGGGGCTaGATGGAGCATGATCTGGTC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPAIGWG*MEHDLV
Trigger: GACCAGATCATGCTCCATCCAGCCCCACCCAATGGC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGGCCATTGGGTGGGGCTaGATGGAGCATGATCTGGTC +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSAIGWG*MEHDLV
Trigger: GACCAGATCATGCTCCATCCAGCCCCACCCAATGGC...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCCCAAGAGGGGCTGAGTaGAGTCACAGCGGAGATAGT +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPPRGAE*SHSGDS
Trigger: ACTATCTCCGCTGTGACTCCACTCAGCCCCTCTTGG...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCCTCCTGGCTTGGGGCTaGGGTTACCAGGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSLLAWG*GYQGPQ
Trigger: TTGGGGACCCTGGTAACCCCAGCCCCAAGCCAGGAG...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGGGGAAGTTGAGCAGTaGCCCAAAGACACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSGEVEQ*PKDTVV
Trigger: GACGACTGTGTCTTTGGGCCACTGCTCAACTTCCCC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCCAGCCTATGGAGATTaGGAGGAGAGGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSPAYGD*EEREML
Trigger: CAGCATCTCCCTCTCCTCCCAATCTCCATAGGCTGG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGAGTATGCAGATCGCCTaGGAGGCCCAGCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSSMQIA*EAQPME
Trigger: CTCCATAGGCTGGGCCTCCCAGGCGATCTGCATACT...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAAAGGGCTGGGGAATGTaGCAACGATGTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRKGWGM*QRCPPP
Trigger: GGGAGGGGGACATCGTTGCCACATTCCCCAGCCCTT...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR TCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCGCAGCTCACACTTCTaGTTTATGTGCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPRSSHF*FMCRPG
Trigger: GCCAGGCCTGCACATAAATCAGAAGTGTGAGCTGCG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGGTGGAAGGTGCAGCTaGGCTCTGTGGTGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWGGRCS*ALWCCR
Trigger: TCTGCAACACCACAGAGCTCAGCTGCACCTTCCACC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCAGAGCTGAAAGGGCCTaGTGTTCTCCTTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGRAERA*CSPSAE
Trigger: TTCTGCTGAAGGAGAACATCAGGCCCTTTCAGCTCT...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGAGAAGGACTGGTTCTaGGCGTTGGTCCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPEKDWF*ALVQKM
Trigger: CATCTTCTGGACCAACGCTCAGAACCAGTCCTTCTC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACCTGGCTGGCAGCCATaGGGTGGATGTGATACAGAC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRPGWQP*GGCDTD
Trigger: GTCTGTATCACATCCACCTCATGGCTGCCAGCCAGG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCCTGGCTGGCAGCCATaGGGTGGATGTGATACAGAC +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWPGWQP*GGCDTD
Trigger: GTCTGTATCACATCCACCTCATGGCTGCCAGCCAGG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTCAAGGTCATCAGGGTaGGGACTGTACTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSSRSSG*GLYCWW
Trigger: CCACCAACAGTACAGTCCTCACCCTGATGACCTTGA...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTCAAGGTCATCAGGGTaGGGACTGTACTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRSRSSG*GLYCWW
Trigger: CCACCAACAGTACAGTCCTCACCCTGATGACCTTGA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCCGAACAGGCCCAGGATaGTGTGTAGCTCCGACCCCT +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSRTGPG*CVAPTP
Trigger: AGGGGTCGGAGCTACACATCATCCTGGGCCTGTTCG...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCAGGCATCCTCCTCCATaGTTGTGGGCACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSRHPPP*LWAPRS
Trigger: GCTCCTGGGTGCCCACAATCATGGAGGAGGATGCCT...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTGCCTCCGGATTTCCTaGGCTCAAAGCTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSCLRIS*AQSFEA
Trigger: AGCCTCAAAGCTTTGAGCTCAGGAAATCCGGAGGCA...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR TCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGTCAAGAGAAGTTCCTaGAACCAGCTGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRVKRSS*NQLQSS
Trigger: GCTGGACTGCAGCTGGTTTCAGGAACTTCTCTTGAC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGCAGTTTCCCAGCCTTaGCATAGCACCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGAVSQP*HSTNLM
Trigger: CATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGACAACAGCAGGTGTTTaGGTGGGATGCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSTTAGV*VGCSSG
Trigger: GCCACTGCTGCATCCCACGCAAACACCTGCTGTTGT...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCAGCGCATTCTCTGCCTaGACCCAGATGCCCATATTC +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSSAFSA*TQMPIF
Trigger: GAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCAGCGCATTCTCTGCCTaGACCCAGATGCCCATATTC +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPSAFSA*TQMPIF
Trigger: GAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCT...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGAGCGCATTCTCTGCCTaGACCCAGATGCCCATATTC +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRSAFSA*TQMPIF
Trigger: GAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCT...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCACAGTTGTGGGGACATaGTGGTCCCCAGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVTVVGT*WSPAHS
Trigger: AGAATGCGCTGGGGACCAGCATGTCCCCACAACTGT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTACAGTTGTGGGGACATaGTGGTCCCCAGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPTVVGT*WSPAHS
Trigger: AGAATGCGCTGGGGACCAGCATGTCCCCACAACTGT...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTTCAGAGCTGGGCCTCTaGTTTCTGAGAAGACCACCG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPSELGL*FLRRPP
Trigger: CGGTGGTCTTCTCAGAAAGCAGAGGCCCAGCTCTGA...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCCAATGTGCTTTAGATaGAGCTCTGGGGCATGGGAG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSPMCFR*SSGAWE
Trigger: CTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCCAATGTGCTTTAGATaGAGCTCTGGGGCATGGGAG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSPMCFR*SSGAWE
Trigger: CTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGG...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCACCCACTCCAGCTGTaGCCAGGTCTTGCCAATGTG +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWHPLQL*PGLANV
Trigger: CACATTGGCAAGACCTGGGCACAGCTGGAGTGGGTG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCTCTTCCTGTTGGGGCTaGAACAGAGCCAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVSSCWG*NRARQF
Trigger: GAACTGCCTGGCTCTGTTGCAGCCCCAACAGGAAGA...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGTTCCTGAAACCAGCTaGAGTCCAGCTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVVPETS*SPASLP
Trigger: GGGGAGAGAAGCTGGACTGCAGCTGGTTTCAGGAAC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGATCTCCACAGAATCTGTaGCTCCGGGTCCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGSPQNL*LRVQMA
Trigger: AGCCATCTGGACCCGGAGCCACAGATTCTGTGGAGA...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTTCTCCACAGAATCTGTaGCTCCGGGTCCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPSPQNL*LRVQMA
Trigger: AGCCATCTGGACCCGGAGCCACAGATTCTGTGGAGA...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGTGATGATAGATTCCTaGGTCCCATCAGACAGACGC +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGVMIDS*VPSDRR
Trigger: GCGTCTGTCTGATGGGACCCAGGAATCTATCATCAC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGGTCCTGGCTCCCACTaGCAGATGAGGCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSGPGSH*QMRLLV
Trigger: AACCAGCAGCCTCATCTGCCAGTGGGAGCCAGGACC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCAAGCTGGTGGGTAGGTaGGTCTCAGGTCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSKLVGR*VSGPGS
Trigger: GGAGCCAGGACCTGAGACCCACCTACCCACCAGCTT...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCATCAAGACACAGTTGTaGGGACATGCTGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSIKTQL*GHAGPQ
Trigger: CTGGGGACCAGCATGTCCCCACAACTGTGTCTTGAT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTTCCTCCAGGGGCACTaGCTTCCAGAACAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWFLQGH*LPEQLH
Trigger: GTGCAGCTGTTCTGGAAGCCAGTGCCCCTGGAGGAA...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCAGGATGGCCCCAGCCTaGCCTGAGGGTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSRMAPA*PEGLQE
Trigger: TTCTTGGAGACCCTCAGGCCAGGCTGGGGCCATCCT...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCACTGGTTCTGAGCGTTaGTCCAGAAGATGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPTGSER*SRRWCS
Trigger: ACTACACCATCTTCTGGACCAACGCTCAGAACCAGT...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGGATGTGATACAGACTaGCGGGCTCCAGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWGCDTD*RAPGHG
Trigger: TCCATGGCCTGGAGCCCGCCAGTCTGTATCACATCC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGTGGGTCTGGGACACTTaGCCAGAGGGGATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSWVWDT*PEGILP
Trigger: AGGAAGAATCCCCTCTGGCCAAGTGTCCCAGACCCA...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGTGCCAGACTGGGATTaGGGCTGGGTGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWVPDWD*GWVETA
Trigger: AGCAGTTTCCACCCAGCCCCAATCCCAGTCTGGCAC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTTGGGTGGGGCTGGATaGAGCATGATCTGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRLGGAG*SMIWSL
Trigger: TAAGGACCAGATCATGCTCCATCCAGCCCCACCCAA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCAAAAGGCCATTGGGTaGGGCTGGATGGAGCATGAT +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSQKAIG*GWMEHD
Trigger: ATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCAGCACAAAAGGCCATTaGGTGGGGCTGGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVSTKGH*VGLDGA
Trigger: TGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGAGCACAAAAGGCCATTaGGTGGGGCTGGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSSTKGH*VGLDGA
Trigger: TGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCT...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTAGCACAAAAGGCCATTaGGTGGGGCTGGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPSTKGH*VGLDGA
Trigger: TGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCT...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACCAAGAGGGGCTGAGTaGAGTCACAGCGGAGATAGT +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGPRGAE*SHSGDS
Trigger: ACTATCTCCGCTGTGACTCCACTCAGCCCCTCTTGG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGGGGAAGTTGAGCAGTaGCCCAAAGACACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPGEVEQ*PKDTVV
Trigger: GACGACTGTGTCTTTGGGCCACTGCTCAACTTCCCC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGGGGAAGTTGAGCAGTaGCCCAAAGACACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGGEVEQ*PKDTVV
Trigger: GACGACTGTGTCTTTGGGCCACTGCTCAACTTCCCC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCAGCCTATGGAGATTaGGAGGAGAGGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSPAYGD*EEREML
Trigger: CAGCATCTCCCTCTCCTCCCAATCTCCATAGGCTGG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGGTGGAAGGTGCAGCTaGGCTCTGTGGTGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSGGRCS*ALWCCR
Trigger: TCTGCAACACCACAGAGCTCAGCTGCACCTTCCACC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCAGAGCTGAAAGGGCCTaGTGTTCTCCTTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSRAERA*CSPSAE
Trigger: TTCTGCTGAAGGAGAACATCAGGCCCTTTCAGCTCT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCAGAGCTGAAAGGGCCTaGTGTTCTCCTTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPRAERA*CSPSAE
Trigger: TTCTGCTGAAGGAGAACATCAGGCCCTTTCAGCTCT...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGGAGAAGGACTGGTTCTaGGCGTTGGTCCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSEKDWF*ALVQKM
Trigger: CATCTTCTGGACCAACGCTCAGAACCAGTCCTTCTC...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGTCAAGAGAAGTTCCTaGAACCAGCTGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVVKRSS*NQLQSS
Trigger: GCTGGACTGCAGCTGGTTTCAGGAACTTCTCTTGAC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGCAGTTTCCCAGCCTTaGCATAGCACCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRAVSQP*HSTNLM
Trigger: CATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGCTGAGACACTGATGTaGCCGCACTCCTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRAETLM*PHSSRL
Trigger: AAGTCTGGAGGAGTGCGGGCACATCAGTGTCTCAGC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGAGATGGCTGCAGTTCTaGTTGATGATGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRRWLQF*LMMQEA
Trigger: AGCCTCCTGCATCATCAAGCAGAACTGCAGCCATCT...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAACAACAGCAGGTGTTTaGGTGGGATGCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRTTAGV*VGCSSG
Trigger: GCCACTGCTGCATCCCACGCAAACACCTGCTGTTGT...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCTGCCTGCACCCAGATaGCCATATTCTGGTACAACA +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSLPAPR*PYSGTT
Trigger: TGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACCAATGTGCTTTAGATaGAGCTCTGGGGCATGGGAG +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGPMCFR*SSGAWE
Trigger: CTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCAATGTGCTTTAGATaGAGCTCTGGGGCATGGGAG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPPMCFR*SSGAWE
Trigger: CTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCAGGTCTTGCCAATGTaGTTTAGATGCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSQVLPM*FRCSSG
Trigger: CCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTG...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCTTCCTGTTGGGGCTaGAACAGAGCCAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRSSCWG*NRARQF
Trigger: GAACTGCCTGGCTCTGTTGCAGCCCCAACAGGAAGA...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCTGGTCCTTAAAGTATaGAGATCGCCTGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWLVLKV*RSPGRP
Trigger: GGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCCAGCAGGTGTTTGCGTaGGATGCAGCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSQQVFA*DAAVAL
Trigger: CAGAGCCACTGCTGCATCCCACGCAAACACCTGCTG...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCCAGATGCCCATATTCTaGTACAACAGCAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPQMPIF*YNSRCL
Trigger: CAAACACCTGCTGTTGTACCAGAATATGGGCATCTG...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTATCAAGACACAGTTGTaGGGACATGCTGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPIKTQL*GHAGPQ
Trigger: CTGGGGACCAGCATGTCCCCACAACTGTGTCTTGAT...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGATTTATGTGCAGGCCTaGCTGCCATGGCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWIYVQA*LPWLPA
Trigger: TGCTGGGAGCCATGGCAGCCAGGCCTGCACATAAAT...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGCTTCTGAAGGCAGGTaGAAGGTGCAGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRASEGR*KVQLSS
Trigger: AGAGCTCAGCTGCACCTTCCACCTGCCTTCAGAAGC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGATCAGCAGAAACCCCGTaGCTCTCCCATTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGSAETP*LSHSVP
Trigger: TGGAACAGAATGGGAGAGCCACGGGGTTTCTGCTGA...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCTCAGCAGAAACCCCGTaGCTCTCCCATTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVSAETP*LSHSVP
Trigger: TGGAACAGAATGGGAGAGCCACGGGGTTTCTGCTGA...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGGATGTGATACAGACTaGCGGGCTCCAGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSGCDTD*RAPGHG
Trigger: TCCATGGCCTGGAGCCCGCCAGTCTGTATCACATCC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTGGGTCTGGGACACTTaGCCAGAGGGGATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWWVWDT*PEGILP
Trigger: AGGAAGAATCCCCTCTGGCCAAGTGTCCCAGACCCA...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGGTGGAAACTGCTCTTaGGTCCCCCTGGAGCACATA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWGGNCS*VPLEHI
Trigger: TATGTGCTCCAGGGGGACCCAAGAGCAGTTTCCACC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTTTGGGTGGGGCTGGATaGAGCATGATCTGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPLGGAG*SMIWSL
Trigger: TAAGGACCAGATCATGCTCCATCCAGCCCCACCCAA...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGCCATTGGGTGGGGCTaGATGGAGCATGATCTGGTC +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSAIGWG*MEHDLV
Trigger: GACCAGATCATGCTCCATCCAGCCCCACCCAATGGC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCAAAAGGCCATTGGGTaGGGCTGGATGGAGCATGAT +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSQKAIG*GWMEHD
Trigger: ATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCCAAGAGGGGCTGAGTaGAGTCACAGCGGAGATAGT +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWPRGAE*SHSGDS
Trigger: ACTATCTCCGCTGTGACTCCACTCAGCCCCTCTTGG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTTAGTCATGGGCTTATaGACCCTCCCCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRLVMGL*TLPSSP
Trigger: TGGAGAAGAGGGGAGGGTCCATAAGCCCATGACTAA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGAGATGGTGAGAGCCTaGGCTGGGGTAGTTTTTAGT +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSEMVRA*AGVVFS
Trigger: ACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACCAGCCTATGGAGATTaGGAGGAGAGGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRPAYGD*EEREML
Trigger: CAGCATCTCCCTCTCCTCCCAATCTCCATAGGCTGG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCAGTATGCAGATCGCCTaGGAGGCCCAGCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSSMQIA*EAQPME
Trigger: CTCCATAGGCTGGGCCTCCCAGGCGATCTGCATACT...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGGGGGTCTTAAAGGGCTaGGGAATGTGGCAACGATGT +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSGVLKG*GMWQRC
Trigger: ACATCGTTGCCACATTCCCCAGCCCTTTAAGACCCC...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR CCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACCTGCTTGGCCTCCTTaGTCTCTCTTCTCGTCAAGA +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGPAWPP*SLFSSR
Trigger: TCTTGACGAGAAGAGAGACCAAGGAGGCCAAGCAGG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACTGCACACAAGGATGTaGGGTGAGAGCACGGCTCAT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRLHTRM*GESTAH
Trigger: ATGAGCCGTGCTCTCACCCCACATCCTTGTGTGCAG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR TCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCCGCAGCTCACACTTCTaGTTTATGTGCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSRSSHF*FMCRPG
Trigger: GCCAGGCCTGCACATAAATCAGAAGTGTGAGCTGCG...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCACAAGGGAGTCACGATaGTCTCATAGAGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSTRESR*SHRAER
Trigger: CCTTTCAGCTCTATGAGATCATCGTGACTCCCTTGT...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCACAAGGGAGTCACGATaGTCTCATAGAGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSTRESR*SHRAER
Trigger: CCTTTCAGCTCTATGAGATCATCGTGACTCCCTTGT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAGCAGTTTCCCAGCCTTaGCATAGCACCAACTTGATG +
Preference number: 4 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGAVSQP*HSTNLM
Trigger: CATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGC...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCAGATGGCTGCAGTTCTaGTTGATGATGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVRWLQF*LMMQEA
Trigger: AGCCTCCTGCATCATCAAGCAGAACTGCAGCCATCT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCTGCCTGCACCCAGATaGCCATATTCTGGTACAACA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPLPAPR*PYSGTT
Trigger: TGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCAGGTCTTGCCAATGTaGTTTAGATGCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVQVLPM*FRCSSG
Trigger: CCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTG...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGCTGTGCCCAGGTCTTaGCAATGTGCTTTAGATGCA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPAVPRS*QCALDA
Trigger: TGCATCTAAAGCACATTGGCAAGACCTGGGCACAGC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAATCAAGACACAGTTGTaGGGACATGCTGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRIKTQL*GHAGPQ
Trigger: CTGGGGACCAGCATGTCCCCACAACTGTGTCTTGAT...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGCTTCTGAAGGCAGGTaGAAGGTGCAGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSASEGR*KVQLSS
Trigger: AGAGCTCAGCTGCACCTTCCACCTGCCTTCAGAAGC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGGTCCCATGGTGTCCTaGTACAAGGGAGTCACGATG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSGPMVS*YKGVTM
Trigger: CATCGTGACTCCCTTGTACCAGGACACCATGGGACC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCACTGGTTCTGAGCGTTaGTCCAGAAGATGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPTGSER*SRRWCS
Trigger: ACTACACCATCTTCTGGACCAACGCTCAGAACCAGT...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGACTGGTTCTGAGCGTTaGTCCAGAAGATGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRTGSER*SRRWCS
Trigger: ACTACACCATCTTCTGGACCAACGCTCAGAACCAGT...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCACTGGTTCTGAGCGTTaGTCCAGAAGATGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSTGSER*SRRWCS
Trigger: ACTACACCATCTTCTGGACCAACGCTCAGAACCAGT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCTGGGTCTGGGACACTTaGCCAGAGGGGATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSWVWDT*PEGILP
Trigger: AGGAAGAATCCCCTCTGGCCAAGTGTCCCAGACCCA...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACAAAAGGCCATTGGGTaGGGCTGGATGGAGCATGAT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRQKAIG*GWMEHD
Trigger: ATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCAAAGGACCTGATCGCTaGTGCCAGACTGGGATTGGG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSKGPDR*CQTGIG
Trigger: CCCAATCCCAGTCTGGCACCAGCGATCAGGTCCTTT...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGGGGAAGTTGAGCAGTaGCCCAAAGACACAGTCGTC +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSGEVEQ*PKDTVV
Trigger: GACGACTGTGTCTTTGGGCCACTGCTCAACTTCCCC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTTTAGTCATGGGCTTATaGACCCTCCCCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPLVMGL*TLPSSP
Trigger: TGGAGAAGAGGGGAGGGTCCATAAGCCCATGACTAA...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGAGATGGTGAGAGCCTaGGCTGGGGTAGTTTTTAGT +
Preference number: 4 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPEMVRA*AGVVFS
Trigger: ACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACCTGCTTGGCCTCCTTaGTCTCTCTTCTCGTCAAGA +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRPAWPP*SLFSSR
Trigger: TCTTGACGAGAAGAGAGACCAAGGAGGCCAAGCAGG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCACAAGGGAGTCACGATaGTCTCATAGAGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVTRESR*SHRAER
Trigger: CCTTTCAGCTCTATGAGATCATCGTGACTCCCTTGT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR TCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGAGAAGGACTGGTTCTaGGCGTTGGTCCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSEKDWF*ALVQKM
Trigger: CATCTTCTGGACCAACGCTCAGAACCAGTCCTTCTC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAAGATGGCTGCAGTTCTaGTTGATGATGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRRWLQF*LMMQEA
Trigger: AGCCTCCTGCATCATCAAGCAGAACTGCAGCCATCT...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCTGCCTGCACCCAGATaGCCATATTCTGGTACAACA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWLPAPR*PYSGTT
Trigger: TGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGCTGTGCCCAGGTCTTaGCAATGTGCTTTAGATGCA +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRAVPRS*QCALDA
Trigger: TGCATCTAAAGCACATTGGCAAGACCTGGGCACAGC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR GCA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGCTGTGCCCAGGTCTTaGCAATGTGCTTTAGATGCA +
Preference number: 4 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWAVPRS*QCALDA
Trigger: TGCATCTAAAGCACATTGGCAAGACCTGGGCACAGC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCAGATGCCCATATTCTaGTACAACAGCAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSQMPIF*YNSRCL
Trigger: CAAACACCTGCTGTTGTACCAGAATATGGGCATCTG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGTTTCACAACATCCATaGGATCAAGACACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGVSQHP*DQDTVV
Trigger: CACAACTGTGTCTTGATCCCATGGATGTTGTGAAAC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGAGATGGTGAGAGCCTaGGCTGGGGTAGTTTTTAGT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCREMVRA*AGVVFS
Trigger: ACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCTGTTCACCAGCTTTGTaGTCTTGGACAAGTTACTTC +
Preference number: 4 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPCSPAL*SWTSYF
Trigger: GAAGTAACTTGTCCAAGATCACAAAGCTGGTGAACA...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR GCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGCTGTGCCCAGGTCTTaGCAATGTGCTTTAGATGCA +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSAVPRS*QCALDA
Trigger: TGCATCTAAAGCACATTGGCAAGACCTGGGCACAGC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCGTGATGATAGATTCCTaGGTCCCATCAGACAGACGC +
Preference number: 4 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSVMIDS*VPSDRR
Trigger: GCGTCTGTCTGATGGGACCCAGGAATCTATCATCAC...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGGGATGGAGCATGATCTaGTCCTTAAAGTATGCAGAT +
Preference number: 4 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRGWSMI*SLKYAD
Trigger: ATCTGCATACTTTAAGGACCAGATCATGCTCCATCC...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGGATGGAGCATGATCTaGTCCTTAAAGTATGCAGAT +
Preference number: 4 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSGWSMI*SLKYAD
Trigger: ATCTGCATACTTTAAGGACCAGATCATGCTCCATCC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CCA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGGTTTCACAACATCCATaGGATCAAGACACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSVSQHP*DQDTVV
Trigger: CACAACTGTGTCTTGATCCCATGGATGTTGTGAAAC...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGGATGGAGCATGATCTaGTCCTTAAAGTATGCAGAT +
Preference number: 4 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVGWSMI*SLKYAD
Trigger: ATCTGCATACTTTAAGGACCAGATCATGCTCCATCC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR TCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATGTTCACCAGCTTTGTaGTCTTGGACAAGTTACTTC +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRCSPAL*SWTSYF
Trigger: GAAGTAACTTGTCCAAGATCACAAAGCTGGTGAACA...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CCA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGGATGGAGCATGATCTaGTCCTTAAAGTATGCAGAT +
Preference number: 4 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRGWSMI*SLKYAD
Trigger: ATCTGCATACTTTAAGGACCAGATCATGCTCCATCC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
3UTR CAA 72 bp AATACTGAAGTTATAGGAAACAAGCACAAAAGGCCATaGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: NTEVIGNKHKRP*GGAGWSMIWSL
Trigger: TAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS CCA 90 bp CAGGGGCCAGCGGATGCAGCGTATCTGCAGGGTGTAGGCCGTGGCTaGGAGGAGCCCGCAGAGCTCATACTGAAGGGCCTCCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: QGPADAAYLQGVGRG*EEPAELILKGLQGE
Trigger: CTCCCCTTGGAGGCCCTTCAGTATGAGCTCTGCGGGCTCCTCCCAGCCACGGCCTACACCCTGCAGATACGCTGCATCCGCTGGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
ENST00000487540.6
CDS CCA 90 bp CAGGCAGGGGCCAGCGGATGCAGCGTATCTGCAGGGTGTAGGCCGTaGCTGGGAGGAGCCCGCAGAGCTCATACTGAAGGGCCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: QAGASGCSVSAGCRP*LGGARRAHTEGPPR
Trigger: CCTTGGAGGCCCTTCAGTATGAGCTCTGCGGGCTCCTCCCAGCCACGGCCTACACCCTGCAGATACGCTGCATCCGCTGGCCCCTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
ENST00000487540.6
CDS TCA 90 bp CAAGGGCCACCTCCTGGGCTTCTGAAGGCAGGTGGAAGGTGCAGCTaGGCTCTGTGGTGTTGCAGAGGGGCAGGATGGCCCCAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: QGPPPGLLKAGGRCS*ALWCCRGAGWPQPG
Trigger: GCCAGGCTGGGGCCATCCTGCCCCTCTGCAACACCACAGAGCTCAGCTGCACCTTCCACCTGCCTTCAGAAGCCCAGGAGGTGGCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
ENST00000487540.6
CDS GCA 90 bp CTGTCGTTAATGGCTCAGCCTCTGACAGGCCCGGGGGCTGGGGATTaGAACACCTTCCGAGCCTCCCTCCTGCCCTCCCTTGCGCCTTCG +
Preference number: 5 (lower is better)
Translates to: LSLMAQPLTGPGAGD*NTFRASLLPSLAPS
Trigger: CGAAGGCGCAAGGGAGGGCAGGAGGGAGGCTCGGAAGGTGTTGCAATCCCCAGCCCCCGGGCCTGTCAGAGGCTGAGCCATTAACGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373104.5
CDS TCA 90 bp GATTCCTGGGTCCCATCAGACAGACGCTGCTGCCTGCCCCCGGGCTaGAGCTCTGCTCCCAGTCTCCACAGAATCTGTGGCTCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: DSWVPSDRRCCLPPG*SSAPSLHRICGSGS
Trigger: GGACCCGGAGCCACAGATTCTGTGGAGACTGGGAGCAGAGCTTCAGCCCGGGGGCAGGCAGCAGCGTCTGTCTGATGGGACCCAGGAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000480825.6
CDS GCA 90 bp GGTCCCATCAGACAGACGCTGCTGCCTGCCCCCGGGCTGAAGCTCTaGTCCCAGTCTCCACAGAATCTGTGGCTCCGGGTCCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: GPIRQTLLPAPGLKL*SQSPQNLWLRVQMA
Trigger: AGCCATCTGGACCCGGAGCCACAGATTCTGTGGAGACTGGGAGCAGAGCTTCAGCCCGGGGGCAGGCAGCAGCGTCTGTCTGATGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000480825.6
CDS TCA 90 bp GTACTGTTGGTGGCCCCAGCCTGGCTGGCAGCCATGAGGTGGATGTaGTACAGACTGGCGGGCTCCAGGCCATGGAGGACAAAGCCACGG +
Preference number: 5 (lower is better)
Translates to: VLLVAPAWLAAMRWM*YRLAGSRPWRTKPR
Trigger: CCGTGGCTTTGTCCTCCATGGCCTGGAGCCCGCCAGTCTGTATCACATCCACCTCATGGCTGCCAGCCAGGCTGGGGCCACCAACAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464465.6
ENST00000480825.6
ENST00000484762.1
ENST00000487540.6
CDS GCA 90 bp CCAGCTCAGGGGGCTCAGGCACCCACTCCAGCTGTGCCCAGGTCTTaGCAATGTGCTTTAGATGCAGCTCTGGGGCATGGGAGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: PAQGAQAPTPAVPRS*QCALDAALGHGREP
Trigger: TGGCTCCCTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTGGGCACAGCTGGAGTGGGTGCCTGAGCCCCCTGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000487540.6
CDS GCA 90 bp TGGAGTCACAGCGGAGATAGTGCCCTGGCCCTGGGCTTGTGGGGCTaGCCAGCAGCTGCCCATAAAGGACCTGATCGCTGGTGCCAGACT +
Preference number: 5 (lower is better)
Translates to: WSHSGDSALALGLWG*PAAAHKGPDRWCQT
Trigger: AGTCTGGCACCAGCGATCAGGTCCTTTATGGGCAGCTGCTGGGCAGCCCCACAAGCCCAGGGCCAGGGCACTATCTCCGCTGTGACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
ENST00000480825.6
ENST00000487540.6
CDS GCA 90 bp CCAGCTCAGGGGGCTCAGGCACCCACTCCAGCTGTGCCCAGGTCTTaGCAATGTGCTTTAGATGCAGCTCTGGGGCATGGGAGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PAQGAQAPTPAVPRS*QCALDAALGHGREP
Trigger: AGGCTCCCTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTGGGCACAGCTGGAGTGGGTGCCTGAGCCCCCTGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464465.6
CDS GCA 90 bp GAGGTGGAGGGATGGCCTTCAGAGGGAGTCACCTTCCAGAACAGCTaGACTGTCCTGGGGTCCAGCTGCCTCTGCCGCCACCATGTGTCC +
Preference number: 5 (lower is better)
Translates to: EVEGWPSEGVTFQNS*TVLGSSCLCRHHVS
Trigger: GGACACATGGTGGCGGCAGAGGCAGCTGGACCCCAGGACAGTGCAGCTGTTCTGGAAGGTGACTCCCTCTGAAGGCCATCCCTCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp AGCACTGTGAGCTTGGTGATGGGTGGCGTGCCAAGGCCGGGCAGCTaGAAGGCATCCTGCACACAAGGATGTGGGGTGAGAGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: STVSLVMGGVPRPGS*KASCTQGCGVRARL
Trigger: GAGCCGTGCTCTCACCCCACATCCTTGTGTGCAGGATGCCTTCCAGCTGCCCGGCCTTGGCACGCCACCCATCACCAAGCTCACAGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000480825.6
CDS CCA 90 bp GCTCCAGGCCATGGAGGACAAAGCCACGGGAGGAGGCATTCAGGATaGCGGCTGGGAGGGGTGTACGGTCAGCATAGGCAGAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: APGHGGQSHGRRHSG*RLGGVYGQHRQKDW
Trigger: CCAGTCCTTCTGCCTATGCTGACCGTACACCCCTCCCAGCCGCCATCCTGAATGCCTCCTCCCGTGGCTTTGTCCTCCATGGCCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487540.6
CDS GCA 90 bp AGCCTGATCGCTGGTGCCAGACTGGGATTGGGGCTGGGTGGAAACTaGTCTTGGGTCCCCCTGGAGCACATAGGTCTGGACCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: SLIAGARLGLGLGGN*SWVPLEHIGLDQSG
Trigger: CCCACTCTGGTCCAGACCTATGTGCTCCAGGGGGACCCAAGAGCAGTTTCCACCCAGCCCCAATCCCAGTCTGGCACCAGCGATCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331941.6
ENST00000373104.5
CDS GCA 90 bp GACCTGATCGCTGGTGCCAGACTGGGATTGGGGCTGGGTGGAAACTaGTCTTGGGTCCCCCTGGAGCACATAGGTCTGGACCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: DLIAGARLGLGLGGN*SWVPLEHIGLDQSG
Trigger: CCCACTCTGGTCCAGACCTATGTGCTCCAGGGGGACCCAAGAGCAGTTTCCACCCAGCCCCAATCCCAGTCTGGCACCAGCGATCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
ENST00000480825.6
ENST00000484762.1
ENST00000487540.6
CDS GCA 90 bp CCAGCTCAGGGGGCTCAGGCACCCACTCCAGCTGTGCCCAGGTCTTaGCAATGTGCTTTAGATGCAGCTCTGGGGCATGGGAGGGAGCTA +
Preference number: 5 (lower is better)
Translates to: PAQGAQAPTPAVPRS*QCALDAALGHGREL
Trigger: TAGCTCCCTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTGGGCACAGCTGGAGTGGGTGCCTGAGCCCCCTGAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 90 bp TGCACACAAGGATGTGGGGTGAGAGCACGGCTCATTTCAGATGTCTaGCCCAGCCACTGTCCCTGTCTGGGTCCGGGCAGCTGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: CTQGCGVRARLISDV*PSHCPCLGPGSCGD
Trigger: GTCCCCACAGCTGCCCGGACCCAGACAGGGACAGTGGCTGGGGCAGACATCTGAAATGAGCCGTGCTCTCACCCCACATCCTTGTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp GCCATGGAGGACAAAGCCACGGGAGGAGGCATTCAGGATGGCGGCTaGGAGGGGTGTACGGTCAGCATAGGCCTGGATGGTAAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: AMEDKATGGGIQDGG*EGCTVSIGLDGKAA
Trigger: GGCAGCTTTACCATCCAGGCCTATGCTGACCGTACACCCCTCCCAGCCGCCATCCTGAATGCCTCCTCCCGTGGCTTTGTCCTCCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480825.6
ENST00000484762.1
CDS-3UTR CAA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCTCCTGCCCTCCCTaGCGCCTTCGAGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRPSCPP*RLRGHR
Trigger: CCTGTGCCCTCGAAGGCGCAAGGGAGGGCAGGAGGG...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS TCA 90 bp CAGCTGGCTTCTCCACGCTGCGGCTTGTGGCGCAGCTCACACTTCTaGTTTATGTGCAGGCCTGGCTGCCATGGCTCCCAGCACAGCTGT +
Preference number: 5 (lower is better)
Translates to: QLASPRCGLWRSSHF*FMCRPGCHGSQHSC
Trigger: ACAGCTGTGCTGGGAGCCATGGCAGCCAGGCCTGCACATAAATCAGAAGTGTGAGCTGCGCCACAAGCCGCAGCGTGGAGAAGCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
CDS GCA 90 bp TTCTGGTACAACAGCAGGTGTTTGCGTGGGATGCAGCAGTGGCTCTaGCCGTCCTTGGGCACGCAGTCCAGGATGGAGTCCCCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: FWYNSRCLRGMQQWL*PSLGTQSRMESPWV
Trigger: GACCCAAGGGGACTCCATCCTGGACTGCGTGCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 90 bp TGCACACAAGGATGTGGGGTGAGAGCACGGCTCATTTCAGATGTCTaGCCCAGCCACTGTCCCTGTCTGGGTCCGGGCAGCTCCTCCATG +
Preference number: 5 (lower is better)
Translates to: CTQGCGVRARLISDV*PSHCPCLGPGSSSM
Trigger: CATGGAGGAGCTGCCCGGACCCAGACAGGGACAGTGGCTGGGGCAGACATCTGAAATGAGCCGTGCTCTCACCCCACATCCTTGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS GCA 90 bp GGCACCCACTCCAGCTGTGCCCAGGTCTTGCCAATGTGCTTTAGATaGAGCTCTGGGGCATGGGAGGGAGCCTTCAGCAGAAACCCCGTG +
Preference number: 5 (lower is better)
Translates to: GTHSSCAQVLPMCFR*SSGAWEGAFSRNPV
Trigger: CACGGGGTTTCTGCTGAAGGCTCCCTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTGGGCACAGCTGGAGTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464465.6
CDS CCA 90 bp GTCTGGTCAGAGCTGGGCCTCTGCTTTCTGAGAAGACCACCGGAGTaGGACGAGAGGTCCCGGCTGAGTTATAGGCCACAAGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: VWSELGLCFLRRPPE*DERSRLSYRPQGPP
Trigger: AGGTGGCCCTTGTGGCCTATAACTCAGCCGGGACCTCTCGTCCCACTCCGGTGGTCTTCTCAGAAAGCAGAGGCCCAGCTCTGACCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
ENST00000487540.6
CDS CCA 90 bp GCCATGGAGGACAAAGCCACGGGAGGAGGCATTCAGGATGGCGGCTaGGAGGGGTGTACGGTCAGCATAGGCAGAAGGACTGGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: AMEDKATGGGIQDGG*EGCTVSIGRRTGSE
Trigger: CTCAGAACCAGTCCTTCTGCCTATGCTGACCGTACACCCCTCCCAGCCGCCATCCTGAATGCCTCCTCCCGTGGCTTTGTCCTCCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487540.6
CDS CCA 90 bp CAGCCCGGGTCGTCTCACCATTCCTCTTGGGTGGTGGTTTGCCTGTaGAAGTCTGTGGGTGGGAGACCAGCTACCCCACATCTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: QPGSSHHSSWVVVCL*KSVGGRPATPHLWL
Trigger: GAGCCACAGATGTGGGGTAGCTGGTCTCCCACCCACAGACTTCCACAGGCAAACCACCACCCAAGAGGAATGGTGAGACGACCCGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 90 bp TCCAGGATGACCAGCCCGGGTCGTCTCACCATTCCTCTTGGGTGGTaGTTTGCCTGTGGAAGTCTGTGGGTGGGAGACCAGCTACCCCAC +
Preference number: 5 (lower is better)
Translates to: SRMTSPGRLTIPLGW*FACGSLWVGDQLPH
Trigger: GTGGGGTAGCTGGTCTCCCACCCACAGACTTCCACAGGCAAACCACCACCCAAGAGGAATGGTGAGACGACCCGGGCTGGTCATCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS-3UTR CAA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCGTGAGGACTGTACTGTaGGTGGCCCCAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPVRTVL*VAPAWL
Trigger: CAGCCAGGCTGGGGCCACCAACAGTACAGTCCTCAC...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS GCA 90 bp CCCAGATGCCCATATTCTGGTACAACAGCAGGTGTTTGCGTGGGATaGAGCAGTGGCTCTGCCCGTCCTTGGGCACGCAGTCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: PRCPYSGTTAGVCVG*SSGSARPWARSPGW
Trigger: CCATCCTGGACTGCGTGCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGGGCATCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 90 bp CTGCCTGCACCCAGATGCCCATATTCTGGTACAACAGCAGGTGTTTaGGTGGGATGCAGCAGTGGCTCTGCCCGTCCTTGGGCACGCAGT +
Preference number: 5 (lower is better)
Translates to: LPAPRCPYSGTTAGV*VGCSSGSARPWARS
Trigger: ACTGCGTGCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 90 bp GATGACCAGCCCGGGTCGTCTCACCATTCCTCTTGGGTGGTGGTTTaGCTGTGGAAGTCTGTGGGTGGGAGACCAGCTACCCCACATCTG +
Preference number: 5 (lower is better)
Translates to: DDQPGSSHHSSWVVV*LWKSVGGRPATPHL
Trigger: CAGATGTGGGGTAGCTGGTCTCCCACCCACAGACTTCCACAGGCAAACCACCACCCAAGAGGAATGGTGAGACGACCCGGGCTGGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 90 bp CAGTTCTGCTTGATGATGCAGGAGGCTGTGATGGGATCCCCCAGGTaGACGATGGGGGCTGAGACACTGATGTGCCCGCACTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QFCLMMQEAVMGSPR*TMGAETLMCPHSSR
Trigger: TCTGGAGGAGTGCGGGCACATCAGTGTCTCAGCCCCCATCGTCCACCTGGGGGATCCCATCACAGCCTCCTGCATCATCAAGCAGAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000480825.6
CDS CCA 90 bp AGAGTGAAGCTGGTGGGTAGGTGGGTCTCAGGTCCTGGCTCCCACTaGCAGATGAGGCTGCTGGTTGTGAGGTTCATGAGGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RVKLVGRWVSGPGSH*QMRLLVVRFMRQER
Trigger: CCTCTCCTGCCTCATGAACCTCACAACCAGCAGCCTCATCTGCCAGTGGGAGCCAGGACCTGAGACCCACCTACCCACCAGCTTCACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
CDS CCA 90 bp CCCATATTCTGGTACAACAGCAGGTGTTTGCGTGGGATGCAGCAGTaGCTCTGCCCGTCCTTGGGCACGCAGTCCAGGATGGAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PIFWYNSRCLRGMQQ*LCPSLGTQSRMESP
Trigger: AGGGGACTCCATCCTGGACTGCGTGCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS CCA 90 bp CTGCACCCAGATGCCCATATTCTGGTACAACAGCAGGTGTTTGCGTaGGATGCAGCAGTGGCTCTGCCCGTCCTTGGGCACGCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LHPDAHILVQQQVFA*DAAVALPVLGHAVQ
Trigger: CTGGACTGCGTGCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGGGCATCTGGGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS-3UTR CAA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCAGGATGGAGTCCCCTaGGGTCTGACAGTTGCCCCG +
Preference number: 5 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGQDGVP*GLTVAP
Trigger: CGGGGCAACTGTCAGACCCAAGGGGACTCCATCCTG...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGTGAGGACTGTACTGTaGGTGGCCCCAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGVRTVL*VAPAWL
Trigger: CAGCCAGGCTGGGGCCACCAACAGTACAGTCCTCAC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCCGGGGGCTGGGGATaGCAACACCTTCCGAGCCTC +
Preference number: 5 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSPGGWG*QHLPSL
Trigger: GAGGCTCGGAAGGTGTTGCAATCCCCAGCCCCCGGG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS TCA 90 bp CTGGAGCACATAGGTCTGGACCAGAGTGGGGAGGCCACAGGTCTCTaGGCTGTTATGGGACTCCCAGGGCACCGGCTTCTTTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: LEHIGLDQSGEATGL*AVMGLPGHRLLFIL
Trigger: GAGGATGAAAAGAAGCCGGTGCCCTGGGAGTCCCATAACAGCTCAGAGACCTGTGGCCTCCCCACTCTGGTCCAGACCTATGTGCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464465.6
ENST00000480825.6
ENST00000484762.1
ENST00000487540.6
CDS GCA 90 bp GTGGGGACATGCTGGTCCCCAGCGCATTCTCTGCCTGCACCCAGATaGCCATATTCTGGTACAACAGCAGGTGTTTGCGTGGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: VGTCWSPAHSLPAPR*PYSGTTAGVCVGCS
Trigger: GCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 90 bp ACCTGTTGGAGTCCTAAGCCCCGGTTTGTAGGGATCTGTTTGGACTaGGGGAGGTGTCGAGGTGGAGGGATGGCCTTCAGAGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: TCWSPKPRFVGICLD*GRCRGGGMAFRGSH
Trigger: GTGACTCCCTCTGAAGGCCATCCCTCCACCTCGACACCTCCCGCAGTCCAAACAGATCCCTACAAACCGGGGCTTAGGACTCCAACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp TTGCCCCGGCTCTTGAAACTCTTCAGAGTGAAGCTGGTGGGTAGGTaGGTCTCAGGTCCTGGCTCCCACTGGCAGATGAGGCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LPRLLKLFRVKLVGR*VSGPGSHWQMRLLV
Trigger: AACCAGCAGCCTCATCTGCCAGTGGGAGCCAGGACCTGAGACCCACCTACCCACCAGCTTCACTCTGAAGAGTTTCAAGAGCCGGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
CDS CCA 90 bp CTGGTCCCCAGCGCATTCTCTGCCTGCACCCAGATGCCCATATTCTaGTACAACAGCAGGTGTTTGCGTGGGATGCAGCAGTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LVPSAFSACTQMPIF*YNSRCLRGMQQWLC
Trigger: GCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS CCA 90 bp CTCAGAGGCCTCACCTTCCTGTCTCACCCTTCAAGATATGGGGGCTaGAAATGGAAGGATGGGGACGGAGACTTCGAGAGGCTACGGGGG +
Preference number: 5 (lower is better)
Translates to: LRGLTFLSHPSRYGG*KWKDGDGDFERLRG
Trigger: CCCCCGTAGCCTCTCGAAGTCTCCGTCCCCATCCTTCCATTTCCAGCCCCCATATCTTGAAGGGTGAGACAGGAAGGTGAGGCCTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp GCCCCTCCTCACTTGAAACTCTTCAGAGTGAAGCTGGTGGGTAGGTaGGTCTCAGGTCCTGGCTCCCACTGGCAGATGAGGCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: APPHLKLFRVKLVGR*VSGPGSHWQMRLLV
Trigger: AACCAGCAGCCTCATCTGCCAGTGGGAGCCAGGACCTGAGACCCACCTACCCACCAGCTTCACTCTGAAGAGTTTCAAGTGAGGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp TTTTCCAGGATGACCAGCCCGGGTCGTCTCACCATTCCTCTTGGGTaGTGGTTTGCCTGTGGAAGTCTGTGGGTGGGAGACCAGCTACCC +
Preference number: 5 (lower is better)
Translates to: FSRMTSPGRLTIPLG*WFACGSLWVGDQLP
Trigger: GGGTAGCTGGTCTCCCACCCACAGACTTCCACAGGCAAACCACCACCCAAGAGGAATGGTGAGACGACCCGGGCTGGTCATCCTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS-3UTR CAA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTCTCCACGCTGCGGCTaGTGGCGCAGCTCACACTTC +
Preference number: 5 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRSPRCG*WRSSHF
Trigger: GAAGTGTGAGCTGCGCCACAAGCCGCAGCGTGGAGA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCTCTCCACGCTGCGGCTaGTGGCGCAGCTCACACTTC +
Preference number: 5 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPSPRCG*WRSSHF
Trigger: GAAGTGTGAGCTGCGCCACAAGCCGCAGCGTGGAGA...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCGTGAGGACTGTACTGTaGGTGGCCCCAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSVRTVL*VAPAWL
Trigger: CAGCCAGGCTGGGGCCACCAACAGTACAGTCCTCAC...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCGTGAGGACTGTACTGTaGGTGGCCCCAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPVRTVL*VAPAWL
Trigger: CAGCCAGGCTGGGGCCACCAACAGTACAGTCCTCAC...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCTGGGTCTGGGACACTaGGCCAGAGGGGATTCTTCC +
Preference number: 5 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGLGLGH*ARGDSS
Trigger: GGAAGAATCCCCTCTGGCCAAGTGTCCCAGACCCAG...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCGGGTGGAAACTGCTCTaGGGTCCCCCTGGAGCACAT +
Preference number: 5 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGGWKLL*GPPGAH
Trigger: ATGTGCTCCAGGGGGACCCAAGAGCAGTTTCCACCC...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp CCTCTTCTCCAGCTAGCTCAGGCCTTTAAGAGGCAGGCCCAAGAAGGGAACCCCAAGCACAAAAGGCCATaGGGTGGGGCTGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: PLLQLAQAFKRQAQEGNPKHKRP*GGAGWS
Trigger: GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTT...GGGGTTCCCTTCTTGGGCCTGCCTCTTAAAGGCCTGAGCTAGCTGGAGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCTGGCCCAGCCCCTGCTaGGCCTCCTTGGTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPWPSPC*ASLVSL
Trigger: AAGAGAGACCAAGGAGGCCAAGCAGGGGCTGGGCCA...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCCTCAGTTTCCCCATGTaGGCACCTCTGGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSLSFPM*APLAQP
Trigger: GGGCTGGGCCAGAGGTGCCAACATGGGGAAACTGAG...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS CCA 90 bp GAGCCTCAGTTTCCCCATGTTGGCACCTCTGGCCCAGCCCCTGCTTaGCCTCCTTGGTCTCTCTTCTCGTCAAGAGAAGTTCCTGAAACC +
Preference number: 5 (lower is better)
Translates to: EPQFPHVGTSGPAPA*PPWSLFSSREVPET
Trigger: GGTTTCAGGAACTTCTCTTGACGAGAAGAGAGACCAAGGAGGCCAAGCAGGGGCTGGGCCAGAGGTGCCAACATGGGGAAACTGAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000489551.5
ENST00000526980.5
CDS CCA 90 bp ACAAGTTACTTCACCTTTCCGAGCCGAGCCTCAGTTTCCCCATGTTaGCACCTCTGGCCCAGCCCCTGCTTGGCCTCCTTGGTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: TSYFTFPSRASVSPC*HLWPSPCLASLVSL
Trigger: AAGAGAGACCAAGGAGGCCAAGCAGGGGCTGGGCCAGAGGTGCCAACATGGGGAAACTGAGGCTCGGCTCGGAAAGGTGAAGTAACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000489551.5
ENST00000526980.5
CDS-3UTR CAA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCAGGATGGAGTCCCCTaGGGTCTGACAGTTGCCCCG +
Preference number: 5 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSQDGVP*GLTVAP
Trigger: CGGGGCAACTGTCAGACCCAAGGGGACTCCATCCTG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCATCCTCCAGGTCTTGTaGCTATTGCTCGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGILQVL*LLLALG
Trigger: CCCCAGCGCGAGCAATAGCAACAAGACCTGGAGGAT...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCAGGGGATTCTTCCTGTaGGGGCTGCAACAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGRGFFL*GLQQSQ
Trigger: CTGGCTCTGTTGCAGCCCCAACAGGAAGAATCCCCT...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCGGGTGGAAACTGCTCTaGGGTCCCCCTGGAGCACAT +
Preference number: 5 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSGWKLL*GPPGAH
Trigger: ATGTGCTCCAGGGGGACCCAAGAGCAGTTTCCACCC...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTCAGTTTCCCCATGTaGGCACCTCTGGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVLSFPM*APLAQP
Trigger: GGGCTGGGCCAGAGGTGCCAACATGGGGAAACTGAG...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS TCA 90 bp GTCTGTGGGTGGGAGACCAGCTACCCCACATCTGTGGCTCAGACTTaGATCTTGTGGGATTCTCTGGGAATCCCAGGAGCCATGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VCGWETSYPTSVAQT*ILWDSLGIPGAMWQ
Trigger: CTGCCACATGGCTCCTGGGATTCCCAGAGAATCCCACAAGATTCAAGTCTGAGCCACAGATGTGGGGTAGCTGGTCTCCCACCCACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS TCA 90 bp AGAGATTTGCGGACAAGATCTGCGCCTCACTGGCCTTTTCCAGGATaGCCAGCCCGGGTCGTCTCACCATTCCTCTTGGGTGGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: RDLRTRSAPHWPFPG*PARVVSPFLLGGGL
Trigger: CAAACCACCACCCAAGAGGAATGGTGAGACGACCCGGGCTGGTCATCCTGGAAAAGGCCAGTGAGGCGCAGATCTTGTCCGCAAATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 90 bp TTTCCCCATGTTGGCACCTCTGGCCCAGCCCCTGCTTGGCCTCCTTaGTCTCTCTTCTCGTCAAGAGAAGTTCCTGAAACCAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: FPHVGTSGPAPAWPP*SLFSSREVPETSCS
Trigger: ACTGCAGCTGGTTTCAGGAACTTCTCTTGACGAGAAGAGAGACCAAGGAGGCCAAGCAGGGGCTGGGCCAGAGGTGCCAACATGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000489551.5
ENST00000526980.5
CDS-3UTR CAA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGAGGATCTGCAGGCTGTaGCCCCAGTTCAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSRICRL*PQFRQQ
Trigger: CTGCTGCCTGAACTGGGGCAACAGCCTGCAGATCCT...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAAGGATCTGCAGGCTGTaGCCCCAGTTCAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGRICRL*PQFRQQ
Trigger: CTGCTGCCTGAACTGGGGCAACAGCCTGCAGATCCT...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGACAGGATGGAGTCCCCTaGGGTCTGACAGTTGCCCCG +
Preference number: 5 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRQDGVP*GLTVAP
Trigger: CGGGGCAACTGTCAGACCCAAGGGGACTCCATCCTG...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCTCCACGCTGCGGCTaGTGGCGCAGCTCACACTTC +
Preference number: 5 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRSPRCG*WRSSHF
Trigger: GAAGTGTGAGCTGCGCCACAAGCCGCAGCGTGGAGA...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCATCCTCCAGGTCTTGTaGCTATTGCTCGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSILQVL*LLLALG
Trigger: CCCCAGCGCGAGCAATAGCAACAAGACCTGGAGGAT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGAGGGGATTCTTCCTGTaGGGGCTGCAACAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRRGFFL*GLQQSQ
Trigger: CTGGCTCTGTTGCAGCCCCAACAGGAAGAATCCCCT...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACTGGGTCTGGGACACTaGGCCAGAGGGGATTCTTCC +
Preference number: 5 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGLGLGH*ARGDSS
Trigger: GGAAGAATCCCCTCTGGCCAAGTGTCCCAGACCCAG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCAAGCACAAAAGGCCATaGGGTGGGGCTGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSKHKRP*GGAGWS
Trigger: GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCAAGCACAAAAGGCCATaGGGTGGGGCTGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSKHKRP*GGAGWS
Trigger: GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTT...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCCCAGCCTATGGAGATaGGGAGGAGAGGGAGATGCT +
Preference number: 5 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSPSLWR*GGEGDA
Trigger: AGCATCTCCCTCTCCTCCCAATCTCCATAGGCTGGG...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCCCTGCTTGGCCTCCTaGGTCTCTCTTCTCGTCAAG +
Preference number: 5 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSPCLAS*VSLLVK
Trigger: CTTGACGAGAAGAGAGACCAAGGAGGCCAAGCAGGG...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTGGCCCAGCCCCTGCTaGGCCTCCTTGGTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWWPSPC*ASLVSL
Trigger: AAGAGAGACCAAGGAGGCCAAGCAGGGGCTGGGCCA...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS TCA 90 bp CCCTGCTTGGCCTCCTTGGTCTCTCTTCTCGTCAAGAGAAGTTCCTaGAACCAGCTGCAGTCCAGCTTCTCTCCCCGAGCTCTGTCGTTA +
Preference number: 5 (lower is better)
Translates to: PCLASLVSLLVKRSS*NQLQSSFSPRALSL
Trigger: TAACGACAGAGCTCGGGGAGAGAAGCTGGACTGCAGCTGGTTTCAGGAACTTCTCTTGACGAGAAGAGAGACCAAGGAGGCCAAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373103.5
ENST00000373104.5
ENST00000489551.5
CDS GCA 90 bp AGACACAGTTGTGGGGACATGCTGGTCCCCAGCGCATTCTCTGCCTaGACCCAGATGCCCATATTCTGGTACAACAGCAGGTGTTTGCGT +
Preference number: 5 (lower is better)
Translates to: RHSCGDMLVPSAFSA*TQMPIFWYNSRCLR
Trigger: ACGCAAACACCTGCTGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 90 bp ATCACCCACCAACATCCATGGGATCAAGACACAGTTGTGGGGACATaGTGGTCCCCAGCGCATTCTCTGCCTGCACCCAGATGCCCATAT +
Preference number: 5 (lower is better)
Translates to: ITHQHPWDQDTVVGT*WSPAHSLPAPRCPY
Trigger: ATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCTTGATCCCATGGATGTTGGTGGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469380.1
ENST00000480825.6
CDS GCA 90 bp CAGGATGATCAGGGCAGCCCAAGTCAGGCTGCAGTTTCCCAGCCTTaGCATAGCACCAACTTGATGTTCACCTCTATGGACAACTGGGGC +
Preference number: 5 (lower is better)
Translates to: QDDQGSPSQAAVSQP*HSTNLMFTSMDNWG
Trigger: GCCCCAGTTGTCCATAGAGGTGAACATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGCAGCCTGACTTGGGCTGCCCTGATCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS CCA 90 bp ACCCACCAACATCCATGGGATCAAGACACAGTTGTGGGGACATGCTaGTCCCCAGCGCATTCTCTGCCTGCACCCAGATGCCCATATTCT +
Preference number: 5 (lower is better)
Translates to: THQHPWDQDTVVGTC*SPAHSLPAPRCPYS
Trigger: AGAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCTTGATCCCATGGATGTTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469380.1
ENST00000480825.6
CDS CCA 90 bp TGCCTGTGGAAGTCTGTGGGTGGGAGACCAGCTACCCCACATCTGTaGCTCAGACTTGAATCTTGTGGGATTCTCTGGGAATCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: CLWKSVGGRPATPHL*LRLESCGILWESQE
Trigger: CTCCTGGGATTCCCAGAGAATCCCACAAGATTCAAGTCTGAGCCACAGATGTGGGGTAGCTGGTCTCCCACCCACAGACTTCCACAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS-3UTR CAA 90 bp ATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCCCTGGCTGCAGTTCTGCTaGATGATGCAGGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: MVRAWAGVVFSHGLMDPPWLQFC*MMQEAV
Trigger: CACAGCCTCCTGCATCATCAAGCAGAACTGCAGCCA...GGGAGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTACAACAGCAGGTGTTaGCGTGGGATGCAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSYNSRC*RGMQQW
Trigger: CCACTGCTGCATCCCACGCAAACACCTGCTGTTGTA...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTACAACAGCAGGTGTTaGCGTGGGATGCAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRYNSRC*RGMQQW
Trigger: CCACTGCTGCATCCCACGCAAACACCTGCTGTTGTA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGTCCATCCTCCAGGTCTaGTTGCTATTGCTCGCGCTG +
Preference number: 5 (lower is better)
Translates to: WGWMEHDLVLKVCRSPGRSILQV*LLLLAL
Trigger: CAGCGCGAGCAATAGCAACAAGACCTGGAGGATGGA...CCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCAGCTGTGCCCAGGTCTaGCCAATGTGCTTTAGATGC +
Preference number: 5 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGSCAQV*PMCFRC
Trigger: GCATCTAAAGCACATTGGCAAGACCTGGGCACAGCT...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGAAGGGGATTCTTCCTGTaGGGGCTGCAACAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGRGFFL*GLQQSQ
Trigger: CTGGCTCTGTTGCAGCCCCAACAGGAAGAATCCCCT...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGGGGTGGAAACTGCTCTaGGGTCCCCCTGGAGCACAT +
Preference number: 5 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWGWKLL*GPPGAH
Trigger: ATGTGCTCCAGGGGGACCCAAGAGCAGTTTCCACCC...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGAAGCACAAAAGGCCATaGGGTGGGGCTGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSKHKRP*GGAGWS
Trigger: GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTT...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACCCAGCCTATGGAGATaGGGAGGAGAGGGAGATGCT +
Preference number: 5 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGPSLWR*GGEGDA
Trigger: AGCATCTCCCTCTCCTCCCAATCTCCATAGGCTGGG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCCCTGAGCTCAAAGCTTaGAGGCTGGGCAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSPELKA*RLGRAQ
Trigger: CTGGGCCCTGCCCAGCCTCAAAGCTTTGAGCTCAGG...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373103.5
CDS-3UTR CAA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCCTGCTTGGCCTCCTaGGTCTCTCTTCTCGTCAAG +
Preference number: 5 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSPCLAS*VSLLVK
Trigger: CTTGACGAGAAGAGAGACCAAGGAGGCCAAGCAGGG...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS TCA 90 bp GCCCAAGTCAGGCTGCAGTTTCCCAGCCTTGCCATAGCACCAACTTaGTGTTCACCTCTATGGACAACTGGGGCTCTATCCTGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: AQVRLQFPSLAIAPT*CSPLWTTGALSCWN
Trigger: GTTCCAGCAGGATAGAGCCCCAGTTGTCCATAGAGGTGAACATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGCAGCCTGACTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS GCA 90 bp CCAGTTTCACAACATCCATGGGATCAAGACACAGTTGTGGGGACATaGTGGTCCCCAGCGCATTCTCTGCCTGCACCCAGATGCCCATAT +
Preference number: 5 (lower is better)
Translates to: PVSQHPWDQDTVVGT*WSPAHSLPAPRCPY
Trigger: ATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCTTGATCCCATGGATGTTGTGAAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
CDS-3UTR CAA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCTACAACAGCAGGTGTTaGCGTGGGATGCAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVYNSRC*RGMQQW
Trigger: CCACTGCTGCATCCCACGCAAACACCTGCTGTTGTA...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp GGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCAGAAACCACATAACCTaGGATCCGTCCGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: GAGWSMIWSLKYADRLGGRNHIT*DPSAVF
Trigger: GAAGACAGCGGACGGATCCAAGGTTATGTGGTTTCT...GCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAATCCTCCAGGTCTTGTaGCTATTGCTCGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRILQVL*LLLALG
Trigger: CCCCAGCGCGAGCAATAGCAACAAGACCTGGAGGAT...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTTCCATCCTCCAGGTCTaGTTGCTATTGCTCGCGCTG +
Preference number: 5 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPSILQV*LLLLAL
Trigger: CAGCGCGAGCAATAGCAACAAGACCTGGAGGATGGA...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCAGCTGTGCCCAGGTCTaGCCAATGTGCTTTAGATGC +
Preference number: 5 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSSCAQV*PMCFRC
Trigger: GCATCTAAAGCACATTGGCAAGACCTGGGCACAGCT...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAAGGGGATTCTTCCTGTaGGGGCTGCAACAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRRGFFL*GLQQSQ
Trigger: CTGGCTCTGTTGCAGCCCCAACAGGAAGAATCCCCT...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCCTGGGTCTGGGACACTaGGCCAGAGGGGATTCTTCC +
Preference number: 5 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSLGLGH*ARGDSS
Trigger: GGAAGAATCCCCTCTGGCCAAGTGTCCCAGACCCAG...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCCCAGCCTATGGAGATaGGGAGGAGAGGGAGATGCT +
Preference number: 5 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWPSLWR*GGEGDA
Trigger: AGCATCTCCCTCTCCTCCCAATCTCCATAGGCTGGG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS TCA 90 bp TGGAAATGGAAGGATGGGGACGGAGACTTCGAGAGGCTACGGGGGTaGCACAGAGATAGTGATGTGCTGGTAACCGTTTATCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: WKWKDGDGDFERLRG*HRDSDVLVTVYQPA
Trigger: AGCTGGCTGATAAACGGTTACCAGCACATCACTATCTCTGTGTCACCCCCGTAGCCTCTCGAAGTCTCCGTCCCCATCCTTCCATTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS TCA 90 bp AAGTTGGGTCTGCTTCAGTCCAAAGGGACGAGATGTTGCCGGAAGTaGCAGGAAGGCCTGAGTACTTGGCTTCAGAAGGTGTCCCTTCAC +
Preference number: 5 (lower is better)
Translates to: KLGLLQSKGTRCCRK*QEGLSTWLQKVSLH
Trigger: GTGAAGGGACACCTTCTGAAGCCAAGTACTCAGGCCTTCCTGTCACTTCCGGCAACATCTCGTCCCTTTGGACTGAAGCAGACCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 90 bp ATCAAGACACAGTTGTGGGGACATGCTGGTCCCCAGCGCATTCTCTaGCTGCACCCAGATGCCCATATTCTGGTACAACAGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: IKTQLWGHAGPQRIL*LHPDAHILVQQQVF
Trigger: AAACACCTGCTGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 90 bp CAGGATGATCAGGGCAGCCCAAGTCAGGCTGCAGTTTCCCAGCCTTaGCATAGCACCAACTTGATGTTCACCAGCTTTGTGATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: QDDQGSPSQAAVSQP*HSTNLMFTSFVILD
Trigger: GTCCAAGATCACAAAGCTGGTGAACATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGCAGCCTGACTTGGGCTGCCCTGATCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000489551.5
ENST00000526980.5
CDS GCA 90 bp CTGTTTCCGCTCTTGCCCCAGGGCCTTTGCACTGGTTGTTACTTCTaGTTGAAATGTTTTCCCTCCAGATATCCAGCGGCTTGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LFPLLPQGLCTGCYF*LKCFPSRYPAACSL
Trigger: GAGGGAGCAAGCCGCTGGATATCTGGAGGGAAAACATTTCAAGCAGAAGTAACAACCAGTGCAAAGGCCCTGGGGCAAGAGCGGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp GTTTCACAACATCCATGGGATCAAGACACAGTTGTGGGGACATGCTaGTCCCCAGCGCATTCTCTGCCTGCACCCAGATGCCCATATTCT +
Preference number: 5 (lower is better)
Translates to: VSQHPWDQDTVVGTC*SPAHSLPAPRCPYS
Trigger: AGAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCTTGATCCCATGGATGTTGTGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
CDS CCA 90 bp TGCATGCAAATCACATATAAATGCGTCCACGCCTCCCAGACCTGTTaGAGTCCTAAGCCCCGGTTTGTAGGGATCTGTTTGGACTGCGGG +
Preference number: 5 (lower is better)
Translates to: CMQITYKCVHASQTC*SPKPRFVGICLDCG
Trigger: CCCGCAGTCCAAACAGATCCCTACAAACCGGGGCTTAGGACTCCAACAGGTCTGGGAGGCGTGGACGCATTTATATGTGATTTGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS-3UTR CAA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATGGCTGCAGTTCTGCTaGATGATGCAGGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRWLQFC*MMQEAV
Trigger: CACAGCCTCCTGCATCATCAAGCAGAACTGCAGCCA...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp AGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCCTATGGACAGTTGCCCCGGCTCTaGAAACTCTTCAGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: SMIWSLKYADRLGGPAYGQLPRL*KLFRVK
Trigger: CTTCACTCTGAAGAGTTTCAAGAGCCGGGGCAACTG...TCCATAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTCAGTTGCCCCGGCTCTaGAAACTCTTCAGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPQLPRL*KLFRVK
Trigger: CTTCACTCTGAAGAGTTTCAAGAGCCGGGGCAACTG...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp TGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGCCTGGGAGGCCCAGCAGAAACCACATAACCTaGGATCCGTCCGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: WMEHDLVLKVCRSPGRPSRNHIT*DPSAVF
Trigger: GAAGACAGCGGACGGATCCAAGGTTATGTGGTTTCT...GCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp GGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCAGAAACCACATAACCTaGGATCCGTCCGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: GNKHKRPLGGAGWSMIWSRNHIT*DPSAVF
Trigger: GAAGACAGCGGACGGATCCAAGGTTATGTGGTTTCT...GGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTAGCTGTGCCCAGGTCTaGCCAATGTGCTTTAGATGC +
Preference number: 5 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPSCAQV*PMCFRC
Trigger: GCATCTAAAGCACATTGGCAAGACCTGGGCACAGCT...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS CCA 90 bp GCTGGTAACCGTTTATCAGCCAGCTTGGCAGAGAAAAGCAGACCCTaGTTTGTAGTGTGTGCCTTTCCGCGGTGTAAGTGCTCTCACTGT +
Preference number: 5 (lower is better)
Translates to: AGNRLSASLAEKSRP*FVVCAFPRCKCSHC
Trigger: ACAGTGAGAGCACTTACACCGCGGAAAGGCACACACTACAAACCAGGGTCTGCTTTTCTCTGCCAAGCTGGCTGATAAACGGTTACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp CCTGTCTGGGTCCGGGCAGCTGTGGGGACATTCAACTGTTGTTACTaGTGGAACACAAAGGGTACCACTTGCAAAGCACTAGTATGTTCC +
Preference number: 5 (lower is better)
Translates to: PVWVRAAVGTFNCCY*WNTKGTTCKALVCS
Trigger: GGAACATACTAGTGCTTTGCAAGTGGTACCCTTTGTGTTCCACCAGTAACAACAGTTGAATGTCCCCACAGCTGCCCGGACCCAGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS-3UTR CAA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCTGGCTGCAGTTCTGCTaGATGATGCAGGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSWLQFC*MMQEAV
Trigger: CACAGCCTCCTGCATCATCAAGCAGAACTGCAGCCA...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp ATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGCAGTTGCCCCGGCTCTaGAAACTCTTCAGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: IGNKHKRPLGGAGWSMIWQLPRL*KLFRVK
Trigger: CTTCACTCTGAAGAGTTTCAAGAGCCGGGGCAACTG...CCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp ACTGAAGTTATAGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCTCCATCCTCCAGGTCTaGTTGCTATTGCTCGCGCTG +
Preference number: 5 (lower is better)
Translates to: TEVIGNKHKRPLGGAGWSSILQV*LLLLAL
Trigger: CAGCGCGAGCAATAGCAACAAGACCTGGAGGATGGA...GCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCTATAACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
CDS-3UTR CAA 90 bp GAGATGGTGAGAGCCTGGGCTGGGGTAGTTTTTAGTCATGGGCTTATGGACCCTGGAGGGAGCCATTTCTaGAGAGTAGGCATAGACATG +
Preference number: 5 (lower is better)
Translates to: EMVRAWAGVVFSHGLMDPGGSHF*RVGIDM
Trigger: CATGTCTATGCCTACTCTCAAGAAATGGCTCCCTCC...AGGGTCCATAAGCCCATGACTAAAAACTACCCCAGCCCAGGCTCTCACCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCGGAGGGAGCCATTTCTaGAGAGTAGGCATAGACATG +
Preference number: 5 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVGGSHF*RVGIDM
Trigger: CATGTCTATGCCTACTCTCAAGAAATGGCTCCCTCC...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS TCA 90 bp TATTTTTCTGTAGAGACAAGGTTGCCTAGGCTGGTCTCAAACTCTTaGACTCAGGGGATCTGCCTGCCCTGGCCTCCCAGAGTGTTAGGA +
Preference number: 5 (lower is better)
Translates to: YFSVETRLPRLVSNS*TQGICLPWPPRVLG
Trigger: TCCTAACACTCTGGGAGGCCAGGGCAGGCAGATCCCCTGAGTTCAAGAGTTTGAGACCAGCCTAGGCAACCTTGTCTCTACAGAAAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp GGATCCAGTGTAAGCCAGGGGATTGGGAGAGATCCTCTCCAGGGCTaGAAGTATGGTAGGAAGGCAATGTTCCCTATACTTCTGATTGCT +
Preference number: 5 (lower is better)
Translates to: GSSVSQGIGRDPLQG*KYGRKAMFPILLIA
Trigger: AGCAATCAGAAGTATAGGGAACATTGCCTTCCTACCATACTTCCAGCCCTGGAGAGGATCTCTCCCAATCCCCTGGCTTACACTGGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464365.2
ENST00000480825.6
CDS CCA 90 bp CCTCACACATGCCTGACACATGCCATGCACCGTTCAGACTCAGCATaGTCAGTTTTTCCATATCACAGGGAGGTGACTGAGGCTTTGAGA +
Preference number: 5 (lower is better)
Translates to: PHTCLTHAMHRSDSA*SVFPYHREVTEALR
Trigger: TCTCAAAGCCTCAGTCACCTCCCTGTGATATGGAAAAACTGACCATGCTGAGTCTGAACGGTGCATGGCATGTGTCAGGCATGTGTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp GTCTGGGTCCGGGCAGCTGTGGGGACATTCAACTGTTGTTACTGGTaGAACACAAAGGGTACCACTTGCAAAGCACTAGTATGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VWVRAAVGTFNCCYW*NTKGTTCKALVCSS
Trigger: TGAGGAACATACTAGTGCTTTGCAAGTGGTACCCTTTGTGTTCCACCAGTAACAACAGTTGAATGTCCCCACAGCTGCCCGGACCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp GCTACCCCACATCTGTGGCTCAGACTTGAATCTTGTGGGATTCTCTaGGAATCCCAGGAGCCATGTGGCAGTGCAAGGAAATTCCCAATA +
Preference number: 5 (lower is better)
Translates to: ATPHLWLRLESCGIL*ESQEPCGSARKFPI
Trigger: TATTGGGAATTTCCTTGCACTGCCACATGGCTCCTGGGATTCCCAGAGAATCCCACAAGATTCAAGTCTGAGCCACAGATGTGGGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS-3UTR CAA 90 bp AAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGAGGAGGGAGCCATTTCTaGAGAGTAGGCATAGACATG +
Preference number: 5 (lower is better)
Translates to: KAIGWGWMEHDLVLKVCRGGSHF*RVGIDM
Trigger: CATGTCTATGCCTACTCTCAAGAAATGGCTCCCTCC...TCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
CDS CCA 90 bp CAGCCTTGCCATAGCACCAACTTGATGTTCACCTCTATGGACAACTaGGGCTCTATCCTGCTGGAACCTTCCAAAGAGCCATGTAGAACA +
Preference number: 5 (lower is better)
Translates to: QPCHSTNLMFTSMDN*GSILLEPSKEPCRT
Trigger: TGTTCTACATGGCTCTTTGGAAGGTTCCAGCAGGATAGAGCCCCAGTTGTCCATAGAGGTGAACATCAAGTTGGTGCTATGGCAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS TCA 90 bp TTCAGACTCAGCATGGTCAGTTTTTCCATATCACAGGGAGGTGACTaGGGCTTTGAGATGGACAGAGGTGGGATTCAAAGTTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: FRLSMVSFSISQGGD*GFEMDRGGIQSWVC
Trigger: GCAGACCCAACTTTGAATCCCACCTCTGTCCATCTCAAAGCCTCAGTCACCTCCCTGTGATATGGAAAAACTGACCATGCTGAGTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 90 bp ATTCTGCTACCCCATCTCCATCGCAGCACTTCAATGGCACATTATTaGTCTGAAAGGCAGTGTGGTGTGATGGATGAGTGTGGATGTTGG +
Preference number: 5 (lower is better)
Translates to: ILLPHLHRSTSMAHY*SERQCGVMDECGCW
Trigger: CCAACATCCACACTCATCCATCACACCACACTGCCTTTCAGAGCAATAATGTGCCATTGAAGTGCTGCGATGGAGATGGGGTAGCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp TGGTCAGTTTTTCCATATCACAGGGAGGTGACTGAGGCTTTGAGATaGACAGAGGTGGGATTCAAAGTTGGGTCTGCTTCAGTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: WSVFPYHREVTEALR*TEVGFKVGSASVQR
Trigger: CCTTTGGACTGAAGCAGACCCAACTTTGAATCCCACCTCTGTCCATCTCAAAGCCTCAGTCACCTCCCTGTGATATGGAAAAACTGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS-3UTR CAA 90 bp GCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATGCAGATCGACCAGCTTTGTGATCTaGGACAAGTTACTTCACCTT +
Preference number: 5 (lower is better)
Translates to: AIGWGWMEHDLVLKVCRSTSFVI*DKLLHL
Trigger: AAGGTGAAGTAACTTGTCCAAGATCACAAAGCTGGT...CGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCACCCAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS-3UTR CAA 90 bp AGGAAACAAGCACAAAAGGCCATTGGGTGGGGCTGGATGGAGCATGATCTGGTCACCAGCTTTGTGATCTaGGACAAGTTACTTCACCTT +
Preference number: 5 (lower is better)
Translates to: RKQAQKAIGWGWMEHDLVTSFVI*DKLLHL
Trigger: AAGGTGAAGTAACTTGTCCAAGATCACAAAGCTGGT...GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373106.6
CDS TCA 90 bp TTTGTAGTGTGTGCCTTTCCGCGGTGTAAGTGCTCTCACTGTAGCTaGTTTCAGCCTATTGATGTGACATCATTGATCGGGGAGTTGGGA +
Preference number: 5 (lower is better)
Translates to: FVVCAFPRCKCSHCS*FQPIDVTSLIGELG
Trigger: TCCCAACTCCCCGATCAATGATGTCACATCAATAGGCTGAAATCAGCTACAGTGAGAGCACTTACACCGCGGAAAGGCACACACTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS TCA 90 bp AAAGGGTACCACTTGCAAAGCACTAGTATGTTCCTCACACATGCCTaGCACATGCCATGCACCGTTCAGACTCAGCATGGTCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: KGYHLQSTSMFLTHA*HMPCTVQTQHGQFF
Trigger: GAAAAACTGACCATGCTGAGTCTGAACGGTGCATGGCATGTGTCAGGCATGTGTGAGGAACATACTAGTGCTTTGCAAGTGGTACCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 90 bp GCTTTGTATCCCCAGTACCTAGAGCAGTGCCTAACATGTAGTGGGTaGTTTAGGAAACACGCTGAAAGCATGACTGAATGTGTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: ALYPQYLEQCLTCSG*FRKHAESMTECVSL
Trigger: CAAAGAGACACATTCAGTCATGCTTTCAGCGTGTTTCCTAAAGCACCCACTACATGTTAGGCACTGCTCTAGGTACTGGGGATACAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 90 bp TCTGAGGGCATTTTTGATGCTTTGTATCCCCAGTACCTAGAGCAGTaGCTAACATGTAGTGGGTGCTTTAGGAAACACGCTGAAAGCATG +
Preference number: 5 (lower is better)
Translates to: SEGIFDALYPQYLEQ*LTCSGCFRKHAESM
Trigger: CATGCTTTCAGCGTGTTTCCTAAAGCACCCACTACATGTTAGGCACTGCTCTAGGTACTGGGGATACAAAGCATCAAAAATGCCCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 90 bp ACCACTTGCAAAGCACTAGTATGTTCCTCACACATGCCTGACACATaGCATGCACCGTTCAGACTCAGCATGGTCAGTTTTTCCATATCA +
Preference number: 5 (lower is better)
Translates to: TTCKALVCSSHMPDT*HAPFRLSMVSFSIS
Trigger: TGATATGGAAAAACTGACCATGCTGAGTCTGAACGGTGCATGGCATGTGTCAGGCATGTGTGAGGAACATACTAGTGCTTTGCAAGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 90 bp GGGACATTCAACTGTTGTTACTGGTGGAACACAAAGGGTACCACTTaGAAAGCACTAGTATGTTCCTCACACATGCCTGACACATGCCAT +
Preference number: 5 (lower is better)
Translates to: GTFNCCYWWNTKGTT*KALVCSSHMPDTCH
Trigger: ATGGCATGTGTCAGGCATGTGTGAGGAACATACTAGTGCTTTGCAAGTGGTACCCTTTGTGTTCCACCAGTAACAACAGTTGAATGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 90 bp GAACCTTCCAAAGAGCCATGTAGAACACTTCTCAGAGCTGTCCACTaGAGGGTCAATTTATCCCAGCTTTGTGATCTTGGACAAGTTACT +
Preference number: 5 (lower is better)
Translates to: EPSKEPCRTLLRAVH*RVNLSQLCDLGQVT
Trigger: AGTAACTTGTCCAAGATCACAAAGCTGGGATAAATTGACCCTCCAGTGGACAGCTCTGAGAAGTGTTCTACATGGCTCTTTGGAAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS TCA 90 bp GTGATAAGAACCCATAGCCACAGCAATCTTTTCACAATTCAAATCTaGTTCTGCTACCCCATCTCCATCGCAGCACTTCAATGGCACATT +
Preference number: 5 (lower is better)
Translates to: VIRTHSHSNLFTIQI*FCYPISIAALQWHI
Trigger: AATGTGCCATTGAAGTGCTGCGATGGAGATGGGGTAGCAGAATCAGATTTGAATTGTGAAAAGATTGCTGTGGCTATGGGTTCTTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS TCA 90 bp TATTTTTGTCTGGGAAATGGTTTGATTTTTGCCAGGTTTGCTCCTTaGATTGTGCCAACTCCCTACTCAATTTCTATCCCAGCACCTGAT +
Preference number: 5 (lower is better)
Translates to: YFCLGNGLIFARFAP*IVPTPYSISIPAPD
Trigger: ATCAGGTGCTGGGATAGAAATTGAGTAGGGAGTTGGCACAATTCAAGGAGCAAACCTGGCAAAAATCAAACCATTTCCCAGACAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000464365.2
ENST00000480825.6
CDS GCA 72 bp GGCTCCCACCTGGCTGGGTGCCATCCTTATGCCCCCTaGCCTGGGGGAGCATCACTTGGAGGCAGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: GSHLAGCHPYAP*PGGASLGGRPW
Trigger: CCAGGGCCTGCCTCCAAGTGATGCTCCCCCAGGGCAGGGGGCATAAGGATGGCACCCAGCCAGGTGGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373104.5
CDS GCA 72 bp TCCAGTCGCTCCAGTGGCCAGGCAGGGGCCAGCGGATaGAGCGTATCTGCAGGGTGTAGGCCGTGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: SSRSSGQAGASG*SVSAGCRPWLG
Trigger: TCCCAGCCACGGCCTACACCCTGCAGATACGCTGCATCCGCTGGCCCCTGCCTGGCCACTGGAGCGACTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
ENST00000487540.6
CDS TCA 72 bp GGCAACGATGTCCCCCTCCCCTGCCTCCGGATTTCCTaGGCTCAAAGCTTTGAGGCTGGGCAGGGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: GNDVPLPCLRIS*AQSFEAGQGPG
Trigger: GCCTGGGCCCTGCCCAGCCTCAAAGCTTTGAGCTCAGGAAATCCGGAGGCAGGGGAGGGGGACATCGTTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373103.5
ENST00000373104.5
CDS TCA 72 bp GGCTGTGATGGGATCCCCCAGGTGGACGATGGGGGCTaGGACACTGATGTGCCCGCACTCCTCCAGACCTGG +
Preference number: 6 (lower is better)
Translates to: GCDGIPQVDDGG*DTDVPALLQTW
Trigger: CCAGGTCTGGAGGAGTGCGGGCACATCAGTGTCTCAGCCCCCATCGTCCACCTGGGGGATCCCATCACAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp AGCGGAGATAGTGCCCTGGCCCTGGGCTTGTGGGGCTaGCCAGCAGCTGCCCATAAAGGACCTGATCGCTGG +
Preference number: 6 (lower is better)
Translates to: SGDSALALGLWG*PAAAHKGPDRW
Trigger: CCAGCGATCAGGTCCTTTATGGGCAGCTGCTGGGCAGCCCCACAAGCCCAGGGCCAGGGCACTATCTCCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361632.8
ENST00000373103.5
ENST00000373106.6
ENST00000464465.6
ENST00000480825.6
ENST00000487540.6
CDS CCA 72 bp GCGGATGCAGCGTATCTGCAGGGTGTAGGCCGTGGCTaGGAGGAGCCCGCAGAGCTCATACTGAAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: ADAAYLQGVGRG*EEPAELILKGL
Trigger: GAGGCCCTTCAGTATGAGCTCTGCGGGCTCCTCCCAGCCACGGCCTACACCCTGCAGATACGCTGCATCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
ENST00000487540.6
CDS CCA 72 bp GCCAGCGGATGCAGCGTATCTGCAGGGTGTAGGCCGTaGCTGGGAGGAGCCCGCAGAGCTCATACTGAAGGG +
Preference number: 6 (lower is better)
Translates to: ASGCSVSAGCRP*LGGARRAHTEG
Trigger: CCCTTCAGTATGAGCTCTGCGGGCTCCTCCCAGCCACGGCCTACACCCTGCAGATACGCTGCATCCGCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
ENST00000487540.6
CDS CAA 90 bp CCCAGCTCAGGGGGCTCAGGCACCCACTCCAGCTGTGCCCAGGTCTaGCCAATGTGCTTTAGATGCAGCTCTGGGGCATGGGAGGGAGCC +
Preference number: 6 (lower is better)
Translates to: PSSGGSGTHSSCAQV*PMCFRCSSGAWEGA
Trigger: GGCTCCCTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTGGGCACAGCTGGAGTGGGTGCCTGAGCCCCCTGAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464465.6
ENST00000487540.6
CDS TCA 72 bp GCCCGCACTCCTCCAGACTTCCGGGGAGCAGCAGGATaGTCAGGGCAGCCCAAGTCAGGCTGCAGTTTCCCA +
Preference number: 6 (lower is better)
Translates to: ARTPPDFRGAAG*SGQPKSGCSFP
Trigger: TGGGAAACTGCAGCCTGACTTGGGCTGCCCTGATCATCCTGCTGCTCCCCGGAAGTCTGGAGGAGTGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
CDS TCA 72 bp GGCTGTGATGGGATCCCCCAGGTGGACGATGGGGGCTaGGACACTGATGTGCCCGCACTCCTCCAGACTTCC +
Preference number: 6 (lower is better)
Translates to: GCDGIPQVDDGG*DTDVPALLQTS
Trigger: GGAAGTCTGGAGGAGTGCGGGCACATCAGTGTCTCAGCCCCCATCGTCCACCTGGGGGATCCCATCACAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
CDS TCA 72 bp GTCCCATCAGACAGACGCTGCTGCCTGCCCCCGGGCTaGAGCTCTGCTCCCAGTCTCCACAGAATCTGTGGC +
Preference number: 6 (lower is better)
Translates to: VPSDRRCCLPPG*SSAPSLHRICG
Trigger: GCCACAGATTCTGTGGAGACTGGGAGCAGAGCTTCAGCCCGGGGGCAGGCAGCAGCGTCTGTCTGATGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000480825.6
CDS TCA 72 bp CTGTACTGTTGGTGGCCCCAGCCTGGCTGGCAGCCATaGGGTGGATGTGATACAGACTGGCGGGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: LYCWWPQPGWQP*GGCDTDWRAPG
Trigger: GCCTGGAGCCCGCCAGTCTGTATCACATCCACCTCATGGCTGCCAGCCAGGCTGGGGCCACCAACAGTACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464465.6
ENST00000480825.6
ENST00000484762.1
ENST00000487540.6
CDS GCA 72 bp CCTGTCACTGCGGCCATCTCTGCTGGGCTCTGCAGGTaGTCACTCCTGTGGCCCAGCACAGCTCGATGTCTC +
Preference number: 6 (lower is better)
Translates to: PVTAAISAGLCR*SLLWPSTARCL
Trigger: GAGACATCGAGCTGTGCTGGGCCACAGGAGTGAGCACCTGCAGAGCCCAGCAGAGATGGCCGCAGTGACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS CAA 90 bp TCCCAGGGCACCGGCTTCTTTTCATCCTCCTCCAGCACTGTGAGCTaGGTGATGGGTGGCGTGCCAAGGCCGGGCAGCTGGAAGGCATCC +
Preference number: 6 (lower is better)
Translates to: SQGTGFFSSSSSTVS*VMGGVPRPGSWKAS
Trigger: GGATGCCTTCCAGCTGCCCGGCCTTGGCACGCCACCCATCACCAAGCTCACAGTGCTGGAGGAGGATGAAAAGAAGCCGGTGCCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464465.6
ENST00000480825.6
ENST00000484762.1
ENST00000487540.6
CDS CAA 90 bp CCCAGCTCAGGGGGCTCAGGCACCCACTCCAGCTGTGCCCAGGTCTaGCCAATGTGCTTTAGATGCAGCTCTGGGGCATGGGAGGGAGCT +
Preference number: 6 (lower is better)
Translates to: PSSGGSGTHSSCAQV*PMCFRCSSGAWEGA
Trigger: AGCTCCCTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTGGGCACAGCTGGAGTGGGTGCCTGAGCCCCCTGAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS TCA 72 bp GATGGGGATGCGAAGGCCTTCCGGGGAGCAGCAGGATaGTCAGGGCAGCCCAAGTCAGGCTGCAGTTTCCCA +
Preference number: 6 (lower is better)
Translates to: DGDAKAFRGAAG*SGQPKSGCSFP
Trigger: TGGGAAACTGCAGCCTGACTTGGGCTGCCCTGATCATCCTGCTGCTCCCCGGAAGGCCTTCGCATCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526980.5
CDS CCA 72 bp GTGTGGTTGAGGTGGGGCAGGGTGATGATAGATTCCTaGGTCCCATCAGACAGACGCTGCTGCCTGCCCCCG +
Preference number: 6 (lower is better)
Translates to: VWLRWGRVMIDS*VPSDRRCCLPP
Trigger: CGGGGGCAGGCAGCAGCGTCTGTCTGATGGGACCCAGGAATCTATCATCACCCTGCCCCACCTCAACCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000480825.6
CDS CCA 72 bp GACAAAGCCACGGGAGGAGGCATTCAGGATGGCGGCTaGGAGGGGTGTACGGTCAGCATAGGCCTGGATGGT +
Preference number: 6 (lower is better)
Translates to: DKATGGGIQDGG*EGCTVSIGLDG
Trigger: ACCATCCAGGCCTATGCTGACCGTACACCCCTCCCAGCCGCCATCCTGAATGCCTCCTCCCGTGGCTTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480825.6
ENST00000484762.1
CDS CCA 72 bp CATGGAGGACAAAGCCACGGGAGGAGGCATTCAGGATaGCGGCTGGGAGGGGTGTACGGTCAGCATAGGCCT +
Preference number: 6 (lower is better)
Translates to: HGGQSHGRRHSG*RLGGVYGQHRP
Trigger: AGGCCTATGCTGACCGTACACCCCTCCCAGCCGCCATCCTGAATGCCTCCTCCCGTGGCTTTGTCCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480825.6
ENST00000484762.1
CDS CCA 72 bp CATGGAGGACAAAGCCACGGGAGGAGGCATTCAGGATaGCGGCTGGGAGGGGTGTACGGTCAGCATAGGCAG +
Preference number: 6 (lower is better)
Translates to: HGGQSHGRRHSG*RLGGVYGQHRQ
Trigger: CTGCCTATGCTGACCGTACACCCCTCCCAGCCGCCATCCTGAATGCCTCCTCCCGTGGCTTTGTCCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487540.6
CDS TCA 72 bp TCTCCACGCTGCGGCTTGTGGCGCAGCTCACACTTCTaGTTTATGTGCAGGCCTGGCTGCCATGGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SPRCGLWRSSHF*FMCRPGCHGSQ
Trigger: CTGGGAGCCATGGCAGCCAGGCCTGCACATAAATCAGAAGTGTGAGCTGCGCCACAAGCCGCAGCGTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
CDS GCA 72 bp CCCGGGTCGTCTCACCATTCCTCTTGGGTGGTGGTTTaGCTGTGGAAGTCTGTGGGTGGGAGACCAGCTACC +
Preference number: 6 (lower is better)
Translates to: PGSSHHSSWVVV*LWKSVGGRPAT
Trigger: GGTAGCTGGTCTCCCACCCACAGACTTCCACAGGCAAACCACCACCCAAGAGGAATGGTGAGACGACCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 72 bp TTGATGATGCAGGAGGCTGTGATGGGATCCCCCAGGTaGACGATGGGGGCTGAGACACTGATGTGCCCGCAC +
Preference number: 6 (lower is better)
Translates to: LMMQEAVMGSPR*TMGAETLMCPH
Trigger: GTGCGGGCACATCAGTGTCTCAGCCCCCATCGTCCACCTGGGGGATCCCATCACAGCCTCCTGCATCATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000480825.6
CDS CCA 72 bp TGGTACAACAGCAGGTGTTTGCGTGGGATGCAGCAGTaGCTCTGCCCGTCCTTGGGCACGCAGTCCAGGATG +
Preference number: 6 (lower is better)
Translates to: WYNSRCLRGMQQ*LCPSLGTQSRM
Trigger: CATCCTGGACTGCGTGCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS CCA 72 bp GACAAAGCCACGGGAGGAGGCATTCAGGATGGCGGCTaGGAGGGGTGTACGGTCAGCATAGGCAGAAGGACT +
Preference number: 6 (lower is better)
Translates to: DKATGGGIQDGG*EGCTVSIGRRT
Trigger: AGTCCTTCTGCCTATGCTGACCGTACACCCCTCCCAGCCGCCATCCTGAATGCCTCCTCCCGTGGCTTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487540.6
CDS CCA 72 bp ACCAGCCCGGGTCGTCTCACCATTCCTCTTGGGTGGTaGTTTGCCTGTGGAAGTCTGTGGGTGGGAGACCAG +
Preference number: 6 (lower is better)
Translates to: TSPGRLTIPLGW*FACGSLWVGDQ
Trigger: CTGGTCTCCCACCCACAGACTTCCACAGGCAAACCACCACCCAAGAGGAATGGTGAGACGACCCGGGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 72 bp CAGGATGACCAGCCCGGGTCGTCTCACCATTCCTCTTaGGTGGTGGTTTGCCTGTGGAAGTCTGTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: QDDQPGSSHHSS*VVVCLWKSVGG
Trigger: CCCACCCACAGACTTCCACAGGCAAACCACCACCCAAGAGGAATGGTGAGACGACCCGGGCTGGTCATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CAA 72 bp CCCGTCCTTGGGCACGCAGTCCAGGATGGAGTCCCCTaGGGTCTGACAGTTGCCCCGGCTCTTGAAACTCTT +
Preference number: 6 (lower is better)
Translates to: PVLGHAVQDGVP*GLTVAPALETL
Trigger: AAGAGTTTCAAGAGCCGGGGCAACTGTCAGACCCAAGGGGACTCCATCCTGGACTGCGTGCCCAAGGACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
CDS CAA 90 bp GTGGCTCTGCCCGTCCTTGGGCACGCAGTCCAGGATGGAGTCCCCTaGGGTCTGACAGTTGCCCCGGCTCTTGAAACTCTTCAGAGTGAA +
Preference number: 6 (lower is better)
Translates to: VALPVLGHAVQDGVP*GLTVAPALETLQSE
Trigger: TTCACTCTGAAGAGTTTCAAGAGCCGGGGCAACTGTCAGACCCAAGGGGACTCCATCCTGGACTGCGTGCCCAAGGACGGGCAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
CDS CAA 90 bp TCTGCCTGCACCCAGATGCCCATATTCTGGTACAACAGCAGGTGTTaGCGTGGGATGCAGCAGTGGCTCTGCCCGTCCTTGGGCACGCAG +
Preference number: 6 (lower is better)
Translates to: SACTQMPIFWYNSRC*RGMQQWLCPSLGTQ
Trigger: CTGCGTGCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS CAA 90 bp TCCCAGACCTGTTGGAGTCCTAAGCCCCGGTTTGTAGGGATCTGTTaGGACTGCGGGAGGTGTCGAGGTGGAGGGATGGCCTTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: SQTCWSPKPRFVGIC*DCGRCRGGGMAFRG
Trigger: CCCTCTGAAGGCCATCCCTCCACCTCGACACCTCCCGCAGTCCAAACAGATCCCTACAAACCGGGGCTTAGGACTCCAACAGGTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS TCA 72 bp ATAGGTCTGGACCAGAGTGGGGAGGCCACAGGTCTCTaGGCTGTTATGGGACTCCCAGGGCACCGGCTTCTT +
Preference number: 6 (lower is better)
Translates to: IGLDQSGEATGL*AVMGLPGHRLL
Trigger: AAGAAGCCGGTGCCCTGGGAGTCCCATAACAGCTCAGAGACCTGTGGCCTCCCCACTCTGGTCCAGACCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464465.6
ENST00000480825.6
ENST00000484762.1
ENST00000487540.6
CDS TCA 72 bp CGGACAAGATCTGCGCCTCACTGGCCTTTTCCAGGATaGCCAGCCCGGGTCGTCTCACCATTCCTCTTGGGT +
Preference number: 6 (lower is better)
Translates to: RTRSAPHWPFPG*PARVVSPFLLG
Trigger: ACCCAAGAGGAATGGTGAGACGACCCGGGCTGGTCATCCTGGAAAAGGCCAGTGAGGCGCAGATCTTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 72 bp GAGCTGGGCCTCTGCTTTCTGAGAAGACCACCGGAGTaGGACGAGAGGTCCCGGCTGAGTTATAGGCCACAA +
Preference number: 6 (lower is better)
Translates to: ELGLCFLRRPPE*DERSRLSYRPQ
Trigger: TTGTGGCCTATAACTCAGCCGGGACCTCTCGTCCCACTCCGGTGGTCTTCTCAGAAAGCAGAGGCCCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000480825.6
ENST00000487540.6
CDS CCA 72 bp AGAGGCTGTGAGGGTCTCGGGCCATGGCATGGAGTCTaGTCAGAGCTGGGCCTCTGCTTTCTGAGAAGACCA +
Preference number: 6 (lower is better)
Translates to: RGCEGLGPWHGV*SELGLCFLRRP
Trigger: TGGTCTTCTCAGAAAGCAGAGGCCCAGCTCTGACCAGACTCCATGCCATGGCCCGAGACCCTCACAGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000464465.6
ENST00000480825.6
ENST00000487540.6
CDS CCA 72 bp ACCAGAGTGGGGAGGCCACAGGTCTCTGAGCTGTTATaGGACTCCCAGGGCACCGGCTTCTTTTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: TRVGRPQVSELL*DSQGTGFFSSS
Trigger: GGAGGATGAAAAGAAGCCGGTGCCCTGGGAGTCCCATAACAGCTCAGAGACCTGTGGCCTCCCCACTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464465.6
ENST00000480825.6
ENST00000484762.1
ENST00000487540.6
CDS CCA 72 bp ATGACCAGCCCGGGTCGTCTCACCATTCCTCTTGGGTaGTGGTTTGCCTGTGGAAGTCTGTGGGTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: MTSPGRLTIPLG*WFACGSLWVGD
Trigger: GTCTCCCACCCACAGACTTCCACAGGCAAACCACCACCCAAGAGGAATGGTGAGACGACCCGGGCTGGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CAA 72 bp ATCTGTGGCTCCGGGTCCAGATGGCTGCAGTTCTGCTaGATGATGCAGGAGGCTGTGATGGGATCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: ICGSGSRWLQFC*MMQEAVMGSPR
Trigger: CCTGGGGGATCCCATCACAGCCTCCTGCATCATCAAGCAGAACTGCAGCCATCTGGACCCGGAGCCACAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000480825.6
CDS CAA 72 bp TGTTGGAGTCCTAAGCCCCGGTTTGTAGGGATCTGTTaGGACTGCGGGAGGTGTCGAGGTGGAGGGATGGCC +
Preference number: 6 (lower is better)
Translates to: CWSPKPRFVGIC*DCGRCRGGGMA
Trigger: GGCCATCCCTCCACCTCGACACCTCCCGCAGTCCAAACAGATCCCTACAAACCGGGGCTTAGGACTCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 90 bp CAAAGGGACGAGATGTTGCCGGAAGTGACAGGAAGGCCTGAGTACTaGGCTTCAGAAGGTGTCCCTTCACTGAGCCTGGGCCGACATCCC +
Preference number: 6 (lower is better)
Translates to: QRDEMLPEVTGRPEY*ASEGVPSLSLGRHP
Trigger: GGGATGTCGGCCCAGGCTCAGTGAAGGGACACCTTCTGAAGCCAAGTACTCAGGCCTTCCTGTCACTTCCGGCAACATCTCGTCCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp CCATATTCTGGTACAACAGCAGGTGTTTGCGTGGGATaGAGCAGTGGCTCTGCCCGTCCTTGGGCACGCAGT +
Preference number: 6 (lower is better)
Translates to: PYSGTTAGVCVG*SSGSARPWARS
Trigger: ACTGCGTGCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 72 bp TGTGGGGACATGCTGGTCCCCAGCGCATTCTCTGCCTaGACCCAGATGCCCATATTCTGGTACAACAGCAGG +
Preference number: 6 (lower is better)
Translates to: CGDMLVPSAFSA*TQMPIFWYNSR
Trigger: CCTGCTGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 72 bp TGGGGCTGGATGGAGCATGATCTGGTCCTTAAAGTATaGAGATCGCCTGGGAGGCCCAGCCTGATCGCTGGT +
Preference number: 6 (lower is better)
Translates to: WGWMEHDLVLKV*RSPGRPSLIAG
Trigger: ACCAGCGATCAGGCTGGGCCTCCCAGGCGATCTGCATACTTTAAGGACCAGATCATGCTCCATCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331941.6
ENST00000373104.5
CDS GCA 72 bp TCCAGCTGTGCCCAGGTCTTGCCAATGTGCTTTAGATaGAGCTCTGGGGCATGGGAGGGAGCCTTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: SSCAQVLPMCFR*SSGAWEGAFSR
Trigger: TCTGCTGAAGGCTCCCTCCCATGCCCCAGAGCTGCATCTAAAGCACATTGGCAAGACCTGGGCACAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464465.6
CDS CCA 72 bp CCCAGTCTCCACAGAATCTGTGGCTCCGGGTCCAGATaGCTGCAGTTCTGCTTGATGATGCAGGAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PSLHRICGSGSR*LQFCLMMQEAV
Trigger: CACAGCCTCCTGCATCATCAAGCAGAACTGCAGCCATCTGGACCCGGAGCCACAGATTCTGTGGAGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000480825.6
CDS CCA 72 bp GATGCCCATATTCTGGTACAACAGCAGGTGTTTGCGTaGGATGCAGCAGTGGCTCTGCCCGTCCTTGGGCAC +
Preference number: 6 (lower is better)
Translates to: DAHILVQQQVFA*DAAVALPVLGH
Trigger: GTGCCCAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS CCA 72 bp CATCCATGGGATCAAGACACAGTTGTGGGGACATGCTaGTCCCCAGCGCATTCTCTGCCTGCACCCAGATGC +
Preference number: 6 (lower is better)
Translates to: HPWDQDTVVGTC*SPAHSLPAPRC
Trigger: GCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCTTGATCCCATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 72 bp TGCTGGTCCCCAGCGCATTCTCTGCCTGCACCCAGATaGCCATATTCTGGTACAACAGCAGGTGTTTGCGTG +
Preference number: 6 (lower is better)
Translates to: CWSPAHSLPAPR*PYSGTTAGVCV
Trigger: CACGCAAACACCTGCTGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 72 bp CAGTTGTGGGGACATGCTGGTCCCCAGCGCATTCTCTaGCTGCACCCAGATGCCCATATTCTGGTACAACAG +
Preference number: 6 (lower is better)
Translates to: QLWGHAGPQRIL*LHPDAHILVQQ
Trigger: CTGTTGTACCAGAATATGGGCATCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS GCA 72 bp CAACATCCATGGGATCAAGACACAGTTGTGGGGACATaGTGGTCCCCAGCGCATTCTCTGCCTGCACCCAGA +
Preference number: 6 (lower is better)
Translates to: QHPWDQDTVVGT*WSPAHSLPAPR
Trigger: TCTGGGTGCAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCTTGATCCCATGGATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS CCA 72 bp TCACCCACCAACATCCATGGGATCAAGACACAGTTGTaGGGACATGCTGGTCCCCAGCGCATTCTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: SPTNIHGIKTQL*GHAGPQRILCL
Trigger: CAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCTTGATCCCATGGATGTTGGTGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469380.1
ENST00000480825.6
CDS CCA 72 bp TCGTCTCACCATTCCTCTTGGGTGGTGGTTTGCCTGTaGAAGTCTGTGGGTGGGAGACCAGCTACCCCACAT +
Preference number: 6 (lower is better)
Translates to: SSHHSSWVVVCL*KSVGGRPATPH
Trigger: ATGTGGGGTAGCTGGTCTCCCACCCACAGACTTCCACAGGCAAACCACCACCCAAGAGGAATGGTGAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CAA 72 bp ACCCAGATGCCCATATTCTGGTACAACAGCAGGTGTTaGCGTGGGATGCAGCAGTGGCTCTGCCCGTCCTTG +
Preference number: 6 (lower is better)
Translates to: TQMPIFWYNSRC*RGMQQWLCPSL
Trigger: CAAGGACGGGCAGAGCCACTGCTGCATCCCACGCAAACACCTGCTGTTGTACCAGAATATGGGCATCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
ENST00000469380.1
ENST00000480825.6
CDS CAA 72 bp GAGATGTTGCCGGAAGTGACAGGAAGGCCTGAGTACTaGGCTTCAGAAGGTGTCCCTTCACTGAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: EMLPEVTGRPEY*ASEGVPSLSLG
Trigger: GCCCAGGCTCAGTGAAGGGACACCTTCTGAAGCCAAGTACTCAGGCCTTCCTGTCACTTCCGGCAACATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 72 bp CTTTCCGAGCCGAGCCTCAGTTTCCCCATCTTGCTTTaGTCTGTGCCACACTGCGCAGTTCCAAAGCCCCCT +
Preference number: 6 (lower is better)
Translates to: LSEPSLSFPILL*SVPHCAVPKPP
Trigger: AGGGGGCTTTGGAACTGCGCAGTGTGGCACAGACAAAAGCAAGATGGGGAAACTGAGGCTCGGCTCGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS CAA 90 bp AGTCTGTGGGTGGGAGACCAGCTACCCCACATCTGTGGCTCAGACTaGAATCTTGTGGGATTCTCTGGGAATCCCAGGAGCCATGTGGCA +
Preference number: 6 (lower is better)
Translates to: SLWVGDQLPHICGSD*NLVGFSGNPRSHVA
Trigger: TGCCACATGGCTCCTGGGATTCCCAGAGAATCCCACAAGATTCAAGTCTGAGCCACAGATGTGGGGTAGCTGGTCTCCCACCCACAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS TCA 72 bp GCCTCCTTGGTCTCTCTTCTCGTCAAGAGAAGTTCCTaGAACCAGCTGCAGTCCAGCTTCTCTCCCCGAGCT +
Preference number: 6 (lower is better)
Translates to: ASLVSLLVKRSS*NQLQSSFSPRA
Trigger: AGCTCGGGGAGAGAAGCTGGACTGCAGCTGGTTTCAGGAACTTCTCTTGACGAGAAGAGAGACCAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000489551.5
CDS TCA 72 bp TGGGAGACCAGCTACCCCACATCTGTGGCTCAGACTTaGATCTTGTGGGATTCTCTGGGAATCCCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: WETSYPTSVAQT*ILWDSLGIPGA
Trigger: GGCTCCTGGGATTCCCAGAGAATCCCACAAGATTCAAGTCTGAGCCACAGATGTGGGGTAGCTGGTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS GCA 72 bp CAGGGCAGCCCAAGTCAGGCTGCAGTTTCCCAGCCTTaGCATAGCACCAACTTGATGTTCACCAGCTTTGTG +
Preference number: 6 (lower is better)
Translates to: QGSPSQAAVSQP*HSTNLMFTSFV
Trigger: CACAAAGCTGGTGAACATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGCAGCCTGACTTGGGCTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000489551.5
ENST00000526980.5
CDS GCA 72 bp CAGGGCAGCCCAAGTCAGGCTGCAGTTTCCCAGCCTTaGCATAGCACCAACTTGATGTTCACCTCTATGGAC +
Preference number: 6 (lower is better)
Translates to: QGSPSQAAVSQP*HSTNLMFTSMD
Trigger: GTCCATAGAGGTGAACATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGCAGCCTGACTTGGGCTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS CCA 72 bp TGTGCAGCTCATCTTGAGTCAAGGAGAGCCTCTAGGTaGGGTGGATGGATCATACAAACGGAGCCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: CAAHLESRRASR*GGWIIQTEPPQ
Trigger: CTGGGGAGGCTCCGTTTGTATGATCCATCCACCCCACCTAGAGGCTCTCCTTGACTCAAGATGAGCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 72 bp GTGGGAGACCAGCTACCCCACATCTGTGGCTCAGACTaGAATCTTGTGGGATTCTCTGGGAATCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: VGDQLPHICGSD*NLVGFSGNPRS
Trigger: GCTCCTGGGATTCCCAGAGAATCCCACAAGATTCAAGTCTGAGCCACAGATGTGGGGTAGCTGGTCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS TCA 72 bp CTGCTTCAGTCCAAAGGGACGAGATGTTGCCGGAAGTaGCAGGAAGGCCTGAGTACTTGGCTTCAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: LLQSKGTRCCRK*QEGLSTWLQKV
Trigger: CACCTTCTGAAGCCAAGTACTCAGGCCTTCCTGTCACTTCCGGCAACATCTCGTCCCTTTGGACTGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp GACCCATGGGTTGCTTCTGACAGCTTGGTAGAGATTTaGGGACAAGATCTGCGCCTCACTGGCCTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: DPWVASDSLVEI*GQDLRLTGLFQ
Trigger: CTGGAAAAGGCCAGTGAGGCGCAGATCTTGTCCGCAAATCTCTACCAAGCTGTCAGAAGCAACCCATGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 72 bp CAGTTTCACAACATCCATGGGATCAAGACACAGTTGTaGGGACATGCTGGTCCCCAGCGCATTCTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: QFHNIHGIKTQL*GHAGPQRILCL
Trigger: CAGGCAGAGAATGCGCTGGGGACCAGCATGTCCCCACAACTGTGTCTTGATCCCATGGATGTTGTGAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331941.6
ENST00000361632.8
ENST00000373103.5
ENST00000373104.5
ENST00000373106.6
ENST00000464365.2
CDS CAA 72 bp CTTCACCTTTCCGAGCCGAGCCTCAGTTTCCCCATCTaGCTTTTGTCTGTGCCACACTGCGCAGTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: LHLSEPSLSFPI*LLSVPHCAVPK
Trigger: CTTTGGAACTGCGCAGTGTGGCACAGACAAAAGCAAGATGGGGAAACTGAGGCTCGGCTCGGAAAGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS CAA 90 bp CACTGTCCCTGTCTGGGTCCGGGCAGCTGTGGGGACATTCAACTGTaGTTACTGGTGGAACACAAAGGGTACCACTTGCAAAGCACTAGT +
Preference number: 6 (lower is better)
Translates to: HCPCLGPGSCGDIQL*LLVEHKGYHLQSTS
Trigger: ACTAGTGCTTTGCAAGTGGTACCCTTTGTGTTCCACCAGTAACAACAGTTGAATGTCCCCACAGCTGCCCGGACCCAGACAGGGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 90 bp AGCCCAAGTCAGGCTGCAGTTTCCCAGCCTTGCCATAGCACCAACTaGATGTTCACCTCTATGGACAACTGGGGCTCTATCCTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: SPSQAAVSQPCHSTN*MFTSMDNWGSILLE
Trigger: TTCCAGCAGGATAGAGCCCCAGTTGTCCATAGAGGTGAACATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGCAGCCTGACTTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS TCA 72 bp AAGGATGGGGACGGAGACTTCGAGAGGCTACGGGGGTaGCACAGAGATAGTGATGTGCTGGTAACCGTTTAT +
Preference number: 6 (lower is better)
Translates to: KDGDGDFERLRG*HRDSDVLVTVY
Trigger: ATAAACGGTTACCAGCACATCACTATCTCTGTGTCACCCCCGTAGCCTCTCGAAGTCTCCGTCCCCATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 72 bp AAGTCTGTGGGTGGGAGACCAGCTACCCCACATCTGTaGCTCAGACTTGAATCTTGTGGGATTCTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: KSVGGRPATPHL*LRLESCGILWE
Trigger: TTCCCAGAGAATCCCACAAGATTCAAGTCTGAGCCACAGATGTGGGGTAGCTGGTCTCCCACCCACAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 72 bp GGCATCTTGAAGAAACCAGACCAGGCACTAACGAACTaGAGGAGGCCAAGGTCCCTGTACTTCCTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: GILKKPDQALTN*RRPRSLYFLKA
Trigger: AGCTTTGAGGAAGTACAGGGACCTTGGCCTCCTCCAGTTCGTTAGTGCCTGGTCTGGTTTCTTCAAGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526980.5
CDS CAA 72 bp AAAGTTGGGTCTGCTTCAGTCCAAAGGGACGAGATGTaGCCGGAAGTGACAGGAAGGCCTGAGTACTTGGCT +
Preference number: 6 (lower is better)
Translates to: KVGSASVQRDEM*PEVTGRPEYLA
Trigger: AGCCAAGTACTCAGGCCTTCCTGTCACTTCCGGCAACATCTCGTCCCTTTGGACTGAAGCAGACCCAACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 72 bp CAGGCTGCAGTTTCCCAGCCTTGCCATAGCACCAACTaGATGTTCACCTCTATGGACAACTGGGGCTCTATC +
Preference number: 6 (lower is better)
Translates to: QAAVSQPCHSTN*MFTSMDNWGSI
Trigger: GATAGAGCCCCAGTTGTCCATAGAGGTGAACATCAAGTTGGTGCTATGGCAAGGCTGGGAAACTGCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS CAA 90 bp GTGGGATTCAAAGTTGGGTCTGCTTCAGTCCAAAGGGACGAGATGTaGCCGGAAGTGACAGGAAGGCCTGAGTACTTGGCTTCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: VGFKVGSASVQRDEM*PEVTGRPEYLASEG
Trigger: ACCTTCTGAAGCCAAGTACTCAGGCCTTCCTGTCACTTCCGGCAACATCTCGTCCCTTTGGACTGAAGCAGACCCAACTTTGAATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 90 bp TTTCCGCTCTTGCCCCAGGGCCTTTGCACTGGTTGTTACTTCTGCTaGAAATGTTTTCCCTCCAGATATCCAGCGGCTTGCTCCCTCATT +
Preference number: 6 (lower is better)
Translates to: FPLLPQGLCTGCYFC*KCFPSRYPAACSLI
Trigger: AATGAGGGAGCAAGCCGCTGGATATCTGGAGGGAAAACATTTCAAGCAGAAGTAACAACCAGTGCAAAGGCCCTGGGGCAAGAGCGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 90 bp TCAGAGCTGTCCACTGGAGGGTCAATTTATCCCAGCTTTGTGATCTaGGACAAGTTACTTCACCTTTCCGAGCCGAGCCTCAGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: SELSTGGSIYPSFVI*DKLLHLSEPSLSFP
Trigger: GGGGAAACTGAGGCTCGGCTCGGAAAGGTGAAGTAACTTGTCCAAGATCACAAAGCTGGGATAAATTGACCCTCCAGTGGACAGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS GCA 72 bp CTCTTGCCCCAGGGCCTTTGCACTGGTTGTTACTTCTaGTTGAAATGTTTTCCCTCCAGATATCCAGCGGCT +
Preference number: 6 (lower is better)
Translates to: LLPQGLCTGCYF*LKCFPSRYPAA
Trigger: AGCCGCTGGATATCTGGAGGGAAAACATTTCAAGCAGAAGTAACAACCAGTGCAAAGGCCCTGGGGCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 72 bp GTAAGCCAGGGGATTGGGAGAGATCCTCTCCAGGGCTaGAAGTATGGTAGGAAGGCAATGTTCCCTATACTT +
Preference number: 6 (lower is better)
Translates to: VSQGIGRDPLQG*KYGRKAMFPIL
Trigger: AAGTATAGGGAACATTGCCTTCCTACCATACTTCCAGCCCTGGAGAGGATCTCTCCCAATCCCCTGGCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464365.2
ENST00000480825.6
CDS CCA 72 bp ATCACATATAAATGCGTCCACGCCTCCCAGACCTGTTaGAGTCCTAAGCCCCGGTTTGTAGGGATCTGTTTG +
Preference number: 6 (lower is better)
Translates to: ITYKCVHASQTC*SPKPRFVGICL
Trigger: CAAACAGATCCCTACAAACCGGGGCTTAGGACTCCAACAGGTCTGGGAGGCGTGGACGCATTTATATGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 72 bp TGCCTGACACATGCCATGCACCGTTCAGACTCAGCATaGTCAGTTTTTCCATATCACAGGGAGGTGACTGAG +
Preference number: 6 (lower is better)
Translates to: CLTHAMHRSDSA*SVFPYHREVTE
Trigger: CTCAGTCACCTCCCTGTGATATGGAAAAACTGACCATGCTGAGTCTGAACGGTGCATGGCATGTGTCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 72 bp CATCTGTGGCTCAGACTTGAATCTTGTGGGATTCTCTaGGAATCCCAGGAGCCATGTGGCAGTGCAAGGAAA +
Preference number: 6 (lower is better)
Translates to: HLWLRLESCGIL*ESQEPCGSARK
Trigger: TTTCCTTGCACTGCCACATGGCTCCTGGGATTCCCAGAGAATCCCACAAGATTCAAGTCTGAGCCACAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CAA 72 bp TTGCCCCAGGGCCTTTGCACTGGTTGTTACTTCTGCTaGAAATGTTTTCCCTCCAGATATCCAGCGGCTTGC +
Preference number: 6 (lower is better)
Translates to: LPQGLCTGCYFC*KCFPSRYPAAC
Trigger: GCAAGCCGCTGGATATCTGGAGGGAAAACATTTCAAGCAGAAGTAACAACCAGTGCAAAGGCCCTGGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp CCCCATCTCCATCGCAGCACTTCAATGGCACATTATTaGTCTGAAAGGCAGTGTGGTGTGATGGATGAGTGT +
Preference number: 6 (lower is better)
Translates to: PHLHRSTSMAHY*SERQCGVMDEC
Trigger: ACACTCATCCATCACACCACACTGCCTTTCAGAGCAATAATGTGCCATTGAAGTGCTGCGATGGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp TCTAGGTCTCTGTTTCCGCTCTTGCCCCAGGGCCTTTaGACTGGTTGTTACTTCTGCTTGAAATGTTTTCCC +
Preference number: 6 (lower is better)
Translates to: SRSLFPLLPQGL*TGCYFCLKCFP
Trigger: GGGAAAACATTTCAAGCAGAAGTAACAACCAGTGCAAAGGCCCTGGGGCAAGAGCGGAAACAGAGACCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp TGCTGCACAGCATCTTTATCAATCCTGGCTTTAGCTTaGATACCCCTGGGGATGGGAAGTTCTCTACCTCTC +
Preference number: 6 (lower is better)
Translates to: CCTASLSILALA*IPLGMGSSLPL
Trigger: GAGAGGTAGAGAACTTCCCATCCCCAGGGGTATGCAAGCTAAAGCCAGGATTGATAAAGATGCTGTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 72 bp CGGGCAGCTGTGGGGACATTCAACTGTTGTTACTGGTaGAACACAAAGGGTACCACTTGCAAAGCACTAGTA +
Preference number: 6 (lower is better)
Translates to: RAAVGTFNCCYW*NTKGTTCKALV
Trigger: TACTAGTGCTTTGCAAGTGGTACCCTTTGTGTTCCACCAGTAACAACAGTTGAATGTCCCCACAGCTGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 72 bp CTTGTCTCCCTGTCTGTGGTTCACCATCTGTCCACGTaGCCAATGACACGTTTCTGTGGTTCGATCTCTATG +
Preference number: 6 (lower is better)
Translates to: LVSLSVVHHLST*PMTRFCGSISM
Trigger: CATAGAGATCGAACCACAGAAACGTGTCATTGGCAACGTGGACAGATGGTGAACCACAGACAGGGAGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 72 bp CTGCTGCACAGCATCTTTATCAATCCTGGCTTTAGCTaGCATACCCCTGGGGATGGGAAGTTCTCTACCTCT +
Preference number: 6 (lower is better)
Translates to: LLHSIFINPGFS*HTPGDGKFSTS
Trigger: AGAGGTAGAGAACTTCCCATCCCCAGGGGTATGCAAGCTAAAGCCAGGATTGATAAAGATGCTGTGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CAA 72 bp TCCACTGGAGGGTCAATTTATCCCAGCTTTGTGATCTaGGACAAGTTACTTCACCTTTCCGAGCCGAGCCTC +
Preference number: 6 (lower is better)
Translates to: STGGSIYPSFVI*DKLLHLSEPSL
Trigger: GAGGCTCGGCTCGGAAAGGTGAAGTAACTTGTCCAAGATCACAAAGCTGGGATAAATTGACCCTCCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS TCA 72 bp CCCTGTCTGTGGTTCACCATCTGTCCACGTTGCCAATaGCACGTTTCTGTGGTTCGATCTCTATGTGTCTTT +
Preference number: 6 (lower is better)
Translates to: PCLWFTICPRCQ*HVSVVRSLCVF
Trigger: AAAGACACATAGAGATCGAACCACAGAAACGTGTCATTGGCAACGTGGACAGATGGTGAACCACAGACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp CCCCAGTACCTAGAGCAGTGCCTAACATGTAGTGGGTaGTTTAGGAAACACGCTGAAAGCATGACTGAATGT +
Preference number: 6 (lower is better)
Translates to: PQYLEQCLTCSG*FRKHAESMTEC
Trigger: ACATTCAGTCATGCTTTCAGCGTGTTTCCTAAAGCACCCACTACATGTTAGGCACTGCTCTAGGTACTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp CAGGCTCTTAACTATTCACTGAACCACACTGTGACGTaGGTTACAGTCTGTCCAAAAGCTAACTCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: QALNYSLNHTVT*VTVCPKANSAP
Trigger: GGGAGCTGAGTTAGCTTTTGGACAGACTGTAACGCACGTCACAGTGTGGTTCAGTGAATAGTTAAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 72 bp TTTCCATATCACAGGGAGGTGACTGAGGCTTTGAGATaGACAGAGGTGGGATTCAAAGTTGGGTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: FPYHREVTEALR*TEVGFKVGSAS
Trigger: TGAAGCAGACCCAACTTTGAATCCCACCTCTGTCCATCTCAAAGCCTCAGTCACCTCCCTGTGATATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 72 bp ATCTTGTGGGATTCTCTGGGAATCCCAGGAGCCATGTaGCAGTGCAAGGAAATTCCCAATATCTCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: ILWDSLGIPGAM*QCKEIPNISPC
Trigger: ACAAGGAGAGATATTGGGAATTTCCTTGCACTGCCACATGGCTCCTGGGATTCCCAGAGAATCCCACAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS TCA 72 bp AGCATGGTCAGTTTTTCCATATCACAGGGAGGTGACTaGGGCTTTGAGATGGACAGAGGTGGGATTCAAAGT +
Preference number: 6 (lower is better)
Translates to: SMVSFSISQGGD*GFEMDRGGIQS
Trigger: ACTTTGAATCCCACCTCTGTCCATCTCAAAGCCTCAGTCACCTCCCTGTGATATGGAAAAACTGACCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp AAAGCACTAGTATGTTCCTCACACATGCCTGACACATaGCATGCACCGTTCAGACTCAGCATGGTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: KALVCSSHMPDT*HAPFRLSMVSF
Trigger: AAAACTGACCATGCTGAGTCTGAACGGTGCATGGCATGTGTCAGGCATGTGTGAGGAACATACTAGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CAA 72 bp CTGCTTGAAATGTTTTCCCTCCAGATATCCAGCGGCTaGCTCCCTCATTTCCTTCAAGGATCTGCTCAATTG +
Preference number: 6 (lower is better)
Translates to: LLEMFSLQISSG*LPHFLQGSAQL
Trigger: CAATTGAGCAGATCCTTGAAGGAAATGAGGGAGCAAGCCGCTGGATATCTGGAGGGAAAACATTTCAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp TGCTTGAAATGTTTTCCCTCCAGATATCCAGCGGCTTaGTCCCTCATTTCCTTCAAGGATCTGCTCAATTGT +
Preference number: 6 (lower is better)
Translates to: CLKCFPSRYPAA*SLISFKDLLNC
Trigger: ACAATTGAGCAGATCCTTGAAGGAAATGAGGGAGCAAGCCGCTGGATATCTGGAGGGAAAACATTTCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS GCA 72 bp AACTGTTGTTACTGGTGGAACACAAAGGGTACCACTTaGAAAGCACTAGTATGTTCCTCACACATGCCTGAC +
Preference number: 6 (lower is better)
Translates to: NCCYWWNTKGTT*KALVCSSHMPD
Trigger: GTCAGGCATGTGTGAGGAACATACTAGTGCTTTGCAAGTGGTACCCTTTGTGTTCCACCAGTAACAACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6
CDS CCA 72 bp GAAGTTCTCTACCTCTCAAGACAGAGTTTCCATGGTTaGAAACCAAGCTCTGCCTGGGCTTCTTTATTTCAG +
Preference number: 6 (lower is better)
Translates to: EVLYLSRQSFHG*KPSSAWASLFQ
Trigger: CTGAAATAAAGAAGCCCAGGCAGAGCTTGGTTTCCAACCATGGAAACTCTGTCTTGAGAGGTAGAGAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CCA 72 bp AAAGAGCCATGTAGAACACTTCTCAGAGCTGTCCACTaGAGGGTCAATTTATCCCAGCTTTGTGATCTTGGA +
Preference number: 6 (lower is better)
Translates to: KEPCRTLLRAVH*RVNLSQLCDLG
Trigger: TCCAAGATCACAAAGCTGGGATAAATTGACCCTCCAGTGGACAGCTCTGAGAAGTGTTCTACATGGCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533491.1
CDS CAA 72 bp GGAAGTTCTCTACCTCTCAAGACAGAGTTTCCATGGTaGGAAACCAAGCTCTGCCTGGGCTTCTTTATTTCA +
Preference number: 6 (lower is better)
Translates to: GSSLPLKTEFPW*ETKLCLGFFIS
Trigger: TGAAATAAAGAAGCCCAGGCAGAGCTTGGTTTCCAACCATGGAAACTCTGTCTTGAGAGGTAGAGAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CAA 72 bp ACTATAAATTCTGTGAGGCCAGCAGACCTTGGCTGTTaGCTTATTACTGTATTCCCAGTGCCTAGTACAGAG +
Preference number: 6 (lower is better)
Translates to: TINSVRPADLGC*LITVFPVPSTE
Trigger: CTCTGTACTAGGCACTGGGAATACAGTAATAAGCAAACAGCCAAGGTCTGCTGGCCTCACAGAATTTATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526980.5
CDS TCA 72 bp CTGGGAAATGGTTTGATTTTTGCCAGGTTTGCTCCTTaGATTGTGCCAACTCCCTACTCAATTTCTATCCCA +
Preference number: 6 (lower is better)
Translates to: LGNGLIFARFAP*IVPTPYSISIP
Trigger: TGGGATAGAAATTGAGTAGGGAGTTGGCACAATTCAAGGAGCAAACCTGGCAAAAATCAAACCATTTCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464365.2
ENST00000480825.6
CDS GCA 72 bp CCTAAACATTACTGTCAGAAAAAGTTTGCCAACCCCTaGTGCACAGCATCTTTATCAATCCTGGCTTTAGCT +
Preference number: 6 (lower is better)
Translates to: PKHYCQKKFANP*CTASLSILALA
Trigger: AGCTAAAGCCAGGATTGATAAAGATGCTGTGCAGCAGGGGTTGGCAAACTTTTTCTGACAGTAATGTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489551.5
CDS CAA 72 bp TCTGGGAAATGGTTTGATTTTTGCCAGGTTTGCTCCTaGAATTGTGCCAACTCCCTACTCAATTTCTATCCC +
Preference number: 6 (lower is better)
Translates to: SGKWFDFCQVCS*NCANSLLNFYP
Trigger: GGGATAGAAATTGAGTAGGGAGTTGGCACAATTCAAGGAGCAAACCTGGCAAAAATCAAACCATTTCCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464365.2
ENST00000480825.6
CDS CAA 90 bp TTAATCCAGATTCCATCTACTGCTAATAAGTGTCTGAGCCAGGATTaGAACCTGGCTCTGCTTGACTCTAAAGCCTCACTTTCTGATTTC +
Preference number: 6 (lower is better)
Translates to: LIQIPSTANKCLSQD*NLALLDSKASLSDF
Trigger: GAAATCAGAAAGTGAGGCTTTAGAGTCAAGCAGAGCCAGGTTCAAATCCTGGCTCAGACACTTATTAGCAGTAGATGGAATCTGGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480825.6