RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSF2RB (Homo sapiens)

Ensembl gene IDs: ENSG00000100368

Ensembl transcript IDs: ENST00000262825.9, ENST00000403662.8, ENST00000406230.5, ENST00000421539.1

Found 454 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCCCACGGGTGCCCACCTGGTGCCTCCCACCTCTGCACCCAGATaGGAATCATGTCATGTGCATCAGCGACTGCCGGGGACAGGCAGC +
Preference number: 1 (lower is better)
Translates to: TPTGAHLVPPTSAPR*ESCHVHQRLPGTGS
Trigger: GCTGCCTGTCCCCGGCAGTCGCTGATGCACATGACATGATTCTCATCTGGGTGCAGAGGTGGGAGGCACCAGGTGGGCACCCGTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR GCA 90 bp CCAAGCCCTAACCCCCACGGGTGCCCACCTGGTGCCTCCCACCTCTaGACCCAGATGAGAATCATGTCATGTGCATCAGCGACTGCCGGG +
Preference number: 1 (lower is better)
Translates to: PSPNPHGCPPGASHL*TQMRIMSCASATAG
Trigger: CCCGGCAGTCGCTGATGCACATGACATGATTCTCATCTGGGTGCAGAGGTGGGAGGCACCAGGTGGGCACCCGTGGGGGTTAGGGCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR GCA 90 bp TGGGCTCTGGACTCCTCTCCTGATGTTCCCCAGGTCCCGCCAGCCTaGCCACCACTTGGGCCGTTAACTTCTCTACATGACGTGGGGTCT +
Preference number: 1 (lower is better)
Translates to: WALDSSPDVPQVPPA*PPLGPLTSLHDVGS
Trigger: AGACCCCACGTCATGTAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGAGGAGTCCAGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR CCA 90 bp AGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTaGTCTATCTGGAAGAGTGGCCACCCGGGCCATTTGGACCAAAGG +
Preference number: 1 (lower is better)
Translates to: RSAAPHLWPVGGRVA*SIWKSGHPGHLDQR
Trigger: CCTTTGGTCCAAATGGCCCGGGTGGCCACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR GCA 90 bp CCACCTCTGCACCCAGATGAGAATCATGTCATGTGCATCAGCGACTaGCGGGGACAGGCAGCCCACACAAGTCCTCAACACAACCAGCCG +
Preference number: 1 (lower is better)
Translates to: PPLHPDENHVMCISD*RGQAAHTSPQHNQP
Trigger: CGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTCGCTGATGCACATGACATGATTCTCATCTGGGTGCAGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR GCA 90 bp ACCTGGTGCCTCCCACCTCTGCACCCAGATGAGAATCATGTCATGTaGATCAGCGACTGCCGGGGACAGGCAGCCCACACAAGTCCTCAA +
Preference number: 1 (lower is better)
Translates to: TWCLPPLHPDENHVM*ISDCRGQAAHTSPQ
Trigger: TTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTCGCTGATGCACATGACATGATTCTCATCTGGGTGCAGAGGTGGGAGGCACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR TCA 90 bp GTGTGTGTGTGTGTCTGTGTGAGCGCAGGGAGAGAAGTGATTTGCTaGAGGTCAAGGGGGCCGGAGCAAGGCTATCTCCTTTCCCAGGCC +
Preference number: 1 (lower is better)
Translates to: VCVCVCVSAGREVIC*RSRGPEQGYLLSQA
Trigger: GGCCTGGGAAAGGAGATAGCCTTGCTCCGGCCCCCTTGACCTTCAGCAAATCACTTCTCTCCCTGCGCTCACACAGACACACACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR TCA 90 bp TATCTAGAAAGTTCTAATAATGCAGAACCTACAAATAAGTTAACCTaGCAGGAAAAATGTGTGCATGTACGTGTGTGTGTGTGTGTCTGT +
Preference number: 1 (lower is better)
Translates to: YLESSNNAEPTNKLT*QEKCVHVRVCVCVC
Trigger: ACAGACACACACACACACACGTACATGCACACATTTTTCCTGTCAGGTTAACTTATTTGTAGGTTCTGCATTATTAGAACTTTCTAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR CAA 90 bp GGCATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTaGCCTGGTCTATCTGGAAGAGTGGCCACCCGGGCCATTTGGACC +
Preference number: 2 (lower is better)
Translates to: GIDQQPLICGRWEGE*PGLSGRVATRAIWT
Trigger: GGTCCAAATGGCCCGGGTGGCCACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR TCA 90 bp GACTGCCGGGGACAGGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCGCGCAGGGAGAGAAGTaGTTTGCTGAAGGTCAAGGG +
Preference number: 2 (lower is better)
Translates to: DCRGQAAHTSPQHNQPHLAQGEK*FAEGQG
Trigger: CCCTTGACCTTCAGCAAATCACTTCTCTCCCTGCGC...GAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR TCA 90 bp GAGACAACTAGCAGGGCTCCCCAGAAGCTCCCAAACAGTCTCTCATGTGCGTCCTTCCCTGAGCCTCACTaGGCGTGCCCAGTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: ETTSRAPQKLPNSLSCASFPEPH*ACPVLC
Trigger: GCACAGGACTGGGCACGCTCAGTGAGGCTCAGGGAA...GGACGCACATGAGAGACTGTTTGGGAGCTTCTGGGGAGCCCTGCTAGTTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR TCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGCTTTGCAGAAATGACTaGGGAAGGTCAGGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: PLICGRWEGELPGLSGRVLCRND*GRSGGR
Trigger: CCTCCCGCCTGACCTTCCTCAGTCATTTCTGCAAAG...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR GCA 90 bp TGCCCATTTCTCGGAGTGACAATCGAGGCTAGTCTGAATTCCCTGAGCCTCACTCCTAACCCCCACGGGTaGCCACCTGGTGCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: CPFLGVTIEASLNSLSLTPNPHG*PPGASH
Trigger: GTGGGAGGCACCAGGTGGGCACCCGTGGGGGTTAGG...AGTGAGGCTCAGGGAATTCAGACTAGCCTCGATTGTCACTCCGAGAAATGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR CCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGAGTAGACGTGGGCTCTaGACTCCTCTCCTGATGTTC +
Preference number: 2 (lower is better)
Translates to: PLICGRWEGELPGLSGRVSRRGL*TPLLMF
Trigger: GAACATCAGGAGAGGAGTCCAGAGCCCACGTCTACT...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR CCA 90 bp CACGGGTGCCCACCTGGTGCCTCCCACCTCTGCACCCAGATGAGAATCATGTCAAGTAGACGTGGGCTCTaGACTCCTCTCCTGATGTTC +
Preference number: 2 (lower is better)
Translates to: HGCPPGASHLCTQMRIMSSRRGL*TPLLMF
Trigger: GAACATCAGGAGAGGAGTCCAGAGCCCACGTCTACT...TGACATGATTCTCATCTGGGTGCAGAGGTGGGAGGCACCAGGTGGGCACCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR TCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGTTTGGCAGTTTCCCCTaGCTTTTCCGCAGTAGACGT +
Preference number: 2 (lower is better)
Translates to: PLICGRWEGELPGLSGRVFGSFP*LFRSRR
Trigger: ACGTCTACTGCGGAAAAGTCAGGGGAAACTGCCAAA...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR TCA 90 bp GAGACAACTAGCAGGGCTCCCCAGAAGCTCCCAAACAGTCTCTCATGTGCGTCCACCTCTGCACCCAGATaGGAATCATGTCATGTGCAT +
Preference number: 2 (lower is better)
Translates to: ETTSRAPQKLPNSLSCASTSAPR*ESCHVH
Trigger: ATGCACATGACATGATTCTCATCTGGGTGCAGAGGT...GGACGCACATGAGAGACTGTTTGGGAGCTTCTGGGGAGCCCTGCTAGTTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR CCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTGCATTTTCCTTTGTTTaGCAGTTTCCCCTGACTTTT +
Preference number: 2 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSAFSFV*QFPLTF
Trigger: AAAAGTCAGGGGAAACTGCCAAACAAAGGAAAATGC...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR GCA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTCAGGTCCCGCCAGCCTaGCCACCACTTGGGCCGTTA +
Preference number: 2 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFQVPPA*PPLGPL
Trigger: TAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTG...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR CCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTAAGCATATATGCCTTTaGGGCATTTTCCTTTGTTTG +
Preference number: 2 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSKHICL*GIFLCL
Trigger: CAAACAAAGGAAAATGCCCCAAAGGCATATATGCTT...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR TCA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTTCTGGACTCCTCTCCTaGTGTTCCCCAGGTCCCGCC +
Preference number: 2 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFSGLLS*CSPGPA
Trigger: GGCGGGACCTGGGGAACATCAGGAGAGGAGTCCAGA...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR CCA 90 bp CTTCTCTACATGACGTGGGGTCTCAAGGGACTGGAGGTCCCACAGACATCACTGGACAAACAACAGATTTaGGGGAAAAACACTCCACCA +
Preference number: 2 (lower is better)
Translates to: LLYMTWGLKGLEVPQTSLDKQQI*GKNTPP
Trigger: TGGTGGAGTGTTTTTCCCCCAAATCTGTTGTTTGTC...CAGTGATGTCTGTGGGACCTCCAGTCCCTTGAGACCCCACGTCATGTAGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR GCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCCAGGTCCCGCCAGCCTaGCCACCACTTGGGCCGTTA +
Preference number: 2 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGQVPPA*PPLGPL
Trigger: TAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTG...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR GCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACATGTGCATCAGCGACTaGCGGGGACAGGCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYMCISD*RGQAAH
Trigger: GTGGGCTGCCTGTCCCCGGCAGTCGCTGATGCACAT...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR TCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCTCTGGACTCCTCTCCTaGTGTTCCCCAGGTCCCGCC +
Preference number: 2 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGSGLLS*CSPGPA
Trigger: GGCGGGACCTGGGGAACATCAGGAGAGGAGTCCAGA...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR GCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCGGTGGGAGGGAGAGTTaGCTGGTCTATCTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSGGRES*LVYLEE
Trigger: CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACC...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR TCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTAGAGAAGTGATTTGCTaGAGGTCAAGGGGGCCGGAG +
Preference number: 2 (lower is better)
Translates to: TDLGEKHSTICERLYVNSREVIC*RSRGPE
Trigger: CTCCGGCCCCCTTGACCTTCAGCAAATCACTTCTCT...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR GCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACGAGAATCATGTCATGTaGATCAGCGACTGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHENHVM*ISDCRG
Trigger: TCCCCGGCAGTCGCTGATGCACATGACATGATTCTC...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR CCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCAAGAACCATAATCCCTaGTGCAGGCCCAGGCATAGA +
Preference number: 2 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSKNHNP*CRPRHR
Trigger: TCTATGCCTGGGCCTGCACCAGGGATTATGGTTCTT...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR GCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACCGACCCCCAATACCATaGCCATTTCTCGGAGTGACA +
Preference number: 2 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYRPPIP*PFLGVT
Trigger: TGTCACTCCGAGAAATGGGCATGGTATTGGGGGTCG...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR-3UTR CCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGAGGAGGGAGAGTTGCCTaGTCTATCTGGAAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRGGRVA*SIWKSG
Trigger: GCCACTCTTCCAGATAGACCAGGCAACTCTCCCTCC...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR GCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCAACCATAATCCCTGGTaGAGGCCCAGGCATAGATCA +
Preference number: 2 (lower is better)
Translates to: KHSTICERLYVNSQKDLINHNPW*RPRHRS
Trigger: TGATCTATGCCTGGGCCTGCACCAGGGATTATGGTT...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR CCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCGCATTTTCCTTTGTTTaGCAGTTTCCCCTGACTTTT +
Preference number: 2 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSAFSFV*QFPLTF
Trigger: AAAAGTCAGGGGAAACTGCCAAACAAAGGAAAATGC...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR CCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCAACACTGCTTTGCAATaGGAGGACCTTTGTAAATCT +
Preference number: 2 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSNTALQ*EDLCKS
Trigger: AGATTTACAAAGGTCCTCCCATTGCAAAGCAGTGTT...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR GCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACGCCCTAAAGCATATATaGCTTTGGGGCATTTTCCTT +
Preference number: 2 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYALKHI*LWGIFL
Trigger: AAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGC...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR GCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGGGACAAACACTGCTTTaGAATGGGAGGACCTTTGTA +
Preference number: 2 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTGQTLL*NGRTFV
Trigger: TACAAAGGTCCTCCCATTGCAAAGCAGTGTTTGTCC...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR GCA 72 bp AGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTaGCTGGTCTATCTGGAAGAGTGGCCACCCGGGCCA +
Preference number: 3 (lower is better)
Translates to: SSPSSVAGGRES*LVYLEEWPPGP
Trigger: TGGCCCGGGTGGCCACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR GCA 72 bp TCCTGTGCCACTCTTCCAAGCCCTAACCCCCACGGGTaGCCACCTGGTGCCTCCCACCTCTGCACCCAGATG +
Preference number: 3 (lower is better)
Translates to: SCATLPSPNPHG*PPGASHLCTQM
Trigger: CATCTGGGTGCAGAGGTGGGAGGCACCAGGTGGGCACCCGTGGGGGTTAGGGCTTGGAAGAGTGGCACAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR TCA 72 bp GGTGCCCACCTGGTGCCTCCCACCTCTGCACCCAGATaGGAATCATGTCATGTGCATCAGCGACTGCCGGGG +
Preference number: 3 (lower is better)
Translates to: GAHLVPPTSAPR*ESCHVHQRLPG
Trigger: CCCCGGCAGTCGCTGATGCACATGACATGATTCTCATCTGGGTGCAGAGGTGGGAGGCACCAGGTGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR CCA 72 bp CTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTaGAAGAGTGGCCACCCGGGCCATTTGGACCAAAGG +
Preference number: 3 (lower is better)
Translates to: LWPVGGRVAWSI*KSGHPGHLDQR
Trigger: CCTTTGGTCCAAATGGCCCGGGTGGCCACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR GCA 72 bp AACCCCCACGGGTGCCCACCTGGTGCCTCCCACCTCTaGACCCAGATGAGAATCATGTCATGTGCATCAGCG +
Preference number: 3 (lower is better)
Translates to: NPHGCPPGASHL*TQMRIMSCASA
Trigger: CGCTGATGCACATGACATGATTCTCATCTGGGTGCAGAGGTGGGAGGCACCAGGTGGGCACCCGTGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR GCA 72 bp GACTCCTCTCCTGATGTTCCCCAGGTCCCGCCAGCCTaGCCACCACTTGGGCCGTTAACTTCTCTACATGAC +
Preference number: 3 (lower is better)
Translates to: DSSPDVPQVPPA*PPLGPLTSLHD
Trigger: GTCATGTAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR TCA 72 bp AGCCTGCCCACCACTTGGGCCGTTAACTTCTCTACATaGCGTGGGGTCTCAAGGGACTGGAGGTCCCACAGA +
Preference number: 3 (lower is better)
Translates to: SLPTTWAVNFST*RGVSRDWRSHR
Trigger: TCTGTGGGACCTCCAGTCCCTTGAGACCCCACGTCATGTAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR GCA 72 bp CACCCAGATGAGAATCATGTCATGTGCATCAGCGACTaGCGGGGACAGGCAGCCCACACAAGTCCTCAACAC +
Preference number: 3 (lower is better)
Translates to: HPDENHVMCISD*RGQAAHTSPQH
Trigger: GTGTTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTCGCTGATGCACATGACATGATTCTCATCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
3UTR CCA 72 bp CCTGGTCTATCTGGAAGAGTGGCCACCCGGGCCATTTaGACCAAAGGCCCTAAAGCATATATGCCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: PGLSGRVATRAI*TKGPKAYMPLG
Trigger: CCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAATGGCCCGGGTGGCCACTCTTCCAGATAGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR CAA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGACGGTGGGAGGGAGAGTaGCCTGGTCTATCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRRWEGE*PGLSGR
Trigger: TCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCG...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR-3UTR CAA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGAAGGACAAACACTGCTTaGCAATGGGAGGACCTTTGT +
Preference number: 3 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRRTNTA*QWEDLC
Trigger: ACAAAGGTCCTCCCATTGCAAAGCAGTGTTTGTCCT...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGCTCAGGGAAGCGGCTaGCCCACGGCCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGAQGSG*PTAPGV
Trigger: CACACCAGGGGCCGTGGGGCAGCCGCTTCCCTGAGC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTAGGTGCTGCTGGGCATaGGGTGCTCTGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGRCCWA*GALAPG
Trigger: CCCTGGGGCCAGAGCACCTCATGCCCAGCAGCACCT...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCGGTGCGGGAGGTCCTaGCCCTCACCCTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLRCGRS*PSPWPS
Trigger: ACTGGGCCAGGGTGAGGGTCAGGACCTCCCGCACCG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGCCTGGTGTGGAGGCTaGCGAGCCCCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGAWCGG*RAPPSA
Trigger: TGCTGAGGGAGGGGCTCGGCAGCCTCCACACCAGGC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGGCTGGCAGGGCCATaGTGTGGGCGTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGLAGP*CGRSGG
Trigger: CCCTCCAGAACGCCCACAGCATGGCCCTGCCAGCCC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGCCCCAGGGTGGCCTaGGAGGTGTTGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGPRVA*EVLERR
Trigger: CCTCCTCTCCAACACCTCCCAGGCCACCCTGGGGCC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGTCCTGGTCGGTGCTaGTCTGCAGGTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGPGRC*SAGPWA
Trigger: AGCCCAGGGACCTGCAGATCAGCACCGACCAGGACC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGAGGTGCTGCTGGGCATaGGGTGCTCTGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLRCCWA*GALAPG
Trigger: CCCTGGGGCCAGAGCACCTCATGCCCAGCAGCACCT...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCCTCCCAGGAGCAGCTaGGCACGGCGGCCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPPPRSS*ARRPRQ
Trigger: TTGACGGGGCCGCCGTGCTCAGCTGCTCCTGGGAGG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCGGTGCGGGAGGTCCTaGCCCTCACCCTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPRCGRS*PSPWPS
Trigger: ACTGGGCCAGGGTGAGGGTCAGGACCTCCCGCACCG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGGGACCAGTTGCACCTaGCCCCCAGCAGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGGTSCT*PPAGRH
Trigger: GTGTCTGCCTGCTGGGGGGCAGGTGCAACTGGTCCC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCAGGGAGGGACTCCCTaGAGCCCCCTGGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPQGGTP*SPLARP
Trigger: AGGCCGAGCCAGGGGGCTGCAGGGAGTCCCTCCCTG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTCCAGGTTCTGGGGCTaGGCCTCATCCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGSRFWG*ASSPGW
Trigger: CCAGCCAGGGGATGAGGCCCAGCCCCAGAACCTGGA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCAGTGGTGCCTGGTGTaGAGGCTGCCGAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLQWCLV*RLPSPS
Trigger: GGAGGGGCTCGGCAGCCTCCACACCAGGCACCACTG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTCCACGGCCCCTGGTGTaGGGGACTCCCGCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGPRPLV*GTPASE
Trigger: TTCACTAGCGGGAGTCCCCCACACCAGGGGCCGTGG...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCAGGGACCCTGGAGGTaGGGACTTCTGGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGQGPWR*GLLAPT
Trigger: GGTGGGAGCCAGAAGTCCCCACCTCCAGGGTCCCTG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCCTGGTCCCATCGCCTaGGCCAGAGGGACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGPGPIA*ARGTSC
Trigger: GCAACTGGTCCCTCTGGCCCAGGCGATGGGACCAGG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTCTCCCTGCAGCCCCCTaGCTCGGCCTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGLPAAP*LGLLST
Trigger: AGTGGAGAGAAGGCCGAGCCAGGGGGCTGCAGGGAG...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGGCTGTGGGGATGTTaGGGACACATCTGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGLWGC*GHICRA
Trigger: CGCCCGGCAGATGTGTCCCCAACATCCCCACAGCCC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCTTGCTGGGACGTCCTaGGAGCCGAGAACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLLAGTS*EPRTWG
Trigger: GCCCCAGGTTCTCGGCTCTCAGGACGTCCCAGCAAG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCCTCTGGGCTCCACTTaGTGGGACGTCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGPLGST*WDVLRA
Trigger: GGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCCTGGTGTGGAGGCTaGCGAGCCCCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPAWCGG*RAPPSA
Trigger: TGCTGAGGGAGGGGCTCGGCAGCCTCCACACCAGGC...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGGAATCTGGCAGTGGTaGCTGGTGTGGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGGIWQW*LVWRLP
Trigger: CGGCAGCCTCCACACCAGGCACCACTGCCAGATTCC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGAGGGTCTCGGTCTTaGTGTCCTTCCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGGSRS*CPSTWP
Trigger: CGGCCACGTGGAAGGACAGCAAGACCGAGACCCTCC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTCTGGGCTCCACTTGCTaGGACGTCCTGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGLGSTC*DVLRAE
Trigger: CTCGGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAG...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGTCCAGGTTCTGGGGCTaGGCCTCATCCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLSRFWG*ASSPGW
Trigger: CCAGCCAGGGGATGAGGCCCAGCCCCAGAACCTGGA...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGTCTGGCAGTGGTGCCTaGTGTGGAGGCTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLSGSGA*CGGCRA
Trigger: GGCTCGGCAGCCTCCACACCAGGCACCACTGCCAGA...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGACGATGTATTGGCCGTaGGTCGCGGGGTCGGGCACG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLTMYWP*VAGSGT
Trigger: CGTGCCCGACCCCGCGACCCACGGCCAATACATCGT...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCCCTGGCCCAGTACCTaGTGGAGGGCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPPWPST*WRAPGL
Trigger: CAGCCCTGGAGCCCTCCACCAGGTACTGGGCCAGGG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTGTTTCTCAGGTGTGTaGGAGGCGGCAGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGCFSGV*EAAGGP
Trigger: AGGCCCGCCTGCCGCCTCCCACACACCTGAGAAACA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGTTCCACGGCCTGTCCTaGTCCCATCGCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLFHGLS*SHRLGQ
Trigger: CTGGCCCAGGCGATGGGACCAGGACAGGCCGTGGAA...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTCTCCAGGGGGTCCACTaGCCAGCCCAGGACATAAGC +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGLQGVH*PAQDIS
Trigger: GCTTATGTCCTGGGCTGGCCAGTGGACCCCCTGGAG...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCTCCAGGGGGTCCACTaGCCAGCCCAGGACATAAGC +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGLQGVH*PAQDIS
Trigger: GCTTATGTCCTGGGCTGGCCAGTGGACCCCCTGGAG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGACCTGGGGCACAGCCTaGCCTGGGGGCTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGTWGTA*PGGFLT
Trigger: AGTCAAGAAGCCCCCAGGCCAGGCTGTGCCCCAGGT...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTCTGCCCACCTGCAGGTaGTGTGGCTGGTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGLPTCR*CGWCSR
Trigger: ACGACTACACCAGCCACATCACCTGCAGGTGGGCAG...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGCCTCCCAGGAGCAGCTaGGCACGGCGGCCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVPPRSS*ARRPRQ
Trigger: TTGACGGGGCCGCCGTGCTCAGCTGCTCCTGGGAGG...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTATAGCCCTCAAACCCTaGCTTCACAGGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGIALKP*LHRAWG
Trigger: GCCCCAGGCCCTGTGAAGTCAGGGTTTGAGGGCTAT...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCCTGGTCTAGGTTCTTaGTCTCAGGACCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGPGLGS*SQDRVP
Trigger: CGGGACCCGGTCCTGAGATCAAGAACCTAGACCAGG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCCTCCCCAGGCTTGTTaGCCTCCCAAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPPPQAC*PPKGAE
Trigger: CTCTGCCCCCTTGGGAGGTCAACAAGCCTGGGGAGG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGAGCACTCTTCCTCCCTaGGGAGCACAGCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGSTLPP*GAQQSL
Trigger: CAGGCTCTGCTGTGCTCCTCAGGGAGGAAGAGTGCT...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406230.5
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTGGTCGGTGCTGATCTaGAGGTCCCTGGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGWSVLI*RSLGSG
Trigger: TCCTGAGCCCAGGGACCTGCAGATCAGCACCGACCA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGAGGGTCTCGGTCTTaGTGTCCTTCCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLGGSRS*CPSTWP
Trigger: CGGCCACGTGGAAGGACAGCAAGACCGAGACCCTCC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTGGGGGCCAAAGCTCTaGGCTCCCGTTCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGWGPKL*APVLEQ
Trigger: CTGTTCCAGAACGGGAGCGCAGAGCTTTGGCCCCCA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTGCTCAGGGAAGCGGCTaGCCCACGGCCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSAQGSG*PTAPGV
Trigger: CACACCAGGGGCCGTGGGGCAGCCGCTTCCCTGAGC...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTGTTGGGGACACATCTaGCGGGCGTTCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGCWGHI*RAFPWV
Trigger: AACCCAGGGGAACGCCCGGCAGATGTGTCCCCAACA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCCCTCTCCATCCCCTTaGCTGTCTAGGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLPSPSP*LSRPGG
Trigger: ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGAGGCTGGACATGCTaGGTCAGAGTGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGGWTC*VRVTVS
Trigger: GCTCACCGTCACTCTGACCCAGCATGTCCAGCCTCC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGACAACCAGTGGCTCTaGGGACTCCCAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGDNQWL*GLPRAT
Trigger: TGTGGCCCTTGGGAGTCCCCAGAGCCACTGGTTGTC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCCTGGGGACAACCAGTaGCTCTGGGGACTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLPGDNQ*LWGLPR
Trigger: CCTTGGGAGTCCCCAGAGCCACTGGTTGTCCCCAGG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTGGCCTGGGAGGTGTTaGAGAGGAGGATGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGWPGRC*RGGWLR
Trigger: ACGCAGCCATCCTCCTCTCCAACACCTCCCAGGCCA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTCAGTGGTGCCTGGTGTaGAGGCTGCCGAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTQWCLV*RLPSPS
Trigger: GGAGGGGCTCGGCAGCCTCCACACCAGGCACCACTG...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTACGGGAATCTGGCAGTaGTGCCTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGTGIWQ*CLVWRL
Trigger: CAGCCTCCACACCAGGCACCACTGCCAGATTCCCGT...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGTCGGGCACGGGAATCTaGCAGTGGTGCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLSGTGI*QWCLVW
Trigger: CCACACCAGGCACCACTGCCAGATTCCCGTGCCCGA...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGACAGAGACGATGTATTaGCCGTGGGTCGCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGTETMY*PWVAGS
Trigger: CGACCCCGCGACCCACGGCCAATACATCGTCTCTGT...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTTGTGGGGGCTCCGGCTaGCCCAGGATGTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPCGGSG*PRMSGR
Trigger: CCTACCTGACATCCTGGGCCAGCCGGAGCCCCCACA...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCATAAGCTGGGGGTCTaGTCTGAGGGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGHKLGV*SEGRPR
Trigger: TCTGGGCCTCCCCTCAGACCAGACCCCCAGCTTATG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGGACCGGCCCTCAATTaGAGGGAGCTCCACATAGCC +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGGPALN*RELHIA
Trigger: GGCTATGTGGAGCTCCCTCCAATTGAGGGCCGGTCC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGTGCCGGGCGTTCCCCTaGGTTCAGGACAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGCRAFP*VQDRAF
Trigger: AAAAGCCCTGTCCTGAACCCAGGGGAACGCCCGGCA...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTGCCGGGCGTTCCCCTaGGTTCAGGACAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGCRAFP*VQDRAF
Trigger: AAAAGCCCTGTCCTGAACCCAGGGGAACGCCCGGCA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGATGGGGGCAGGCTaGCCAGGGCATGTCATCACT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPGMGAG*PGHVIT
Trigger: AGTGATGACATGCCCTGGTCAGCCTGCCCCCATCCC...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGTGGGGTCCTCTATGGTaGGAGGTGACACCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGWGPLW*EVTPRC
Trigger: ACAGCGAGGTGTCACCTCTCACCATAGAGGACCCCA...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTAGGATTGTTCCTTGGTaGCCTGGGGGACCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPRIVPW*PGGPAL
Trigger: GAGGGCCGGTCCCCCAGGTCACCAAGGAACAATCCT...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGAGGGCTTTGAAGAGCTaGATGACGGGCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLRALKS*MTGTWG
Trigger: GCCCCAGGTGCCCGTCATTCAGCTCTTCAAAGCCCT...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCGGGATGGTTTCTTCTaGCCCTGCCAGGCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPRDGFF*PCQAAL
Trigger: GAGCGCAGCCTGGCAGGGGCAGAAGAAACCATCCCG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTAGCCTGGTGTGGAGGCTaGCGAGCCCCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLAWCGG*RAPPSA
Trigger: TGCTGAGGGAGGGGCTCGGCAGCCTCCACACCAGGC...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTAGGGCTGGCAGGGCCATaGTGTGGGCGTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLGLAGP*CGRSGG
Trigger: CCCTCCAGAACGCCCACAGCATGGCCCTGCCAGCCC...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGCCTGTACCCGTAGATaGCACAGAAGCGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLACTRR*HRSGGP
Trigger: TGGCCCTCCGCTTCTGTGGCATCTACGGGTACAGGC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGTGGGGGCCAAAGCTCTaGGCTCCCGTTCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLWGPKL*APVLEQ
Trigger: CTGTTCCAGAACGGGAGCGCAGAGCTTTGGCCCCCA...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGAGCACAGCAGAGCCTaGATCTGGGCTGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGEHSRA*IWAGLV
Trigger: TACAAGCCCAGCCCAGATGCAGGCTCTGCTGTGCTC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCAGGTCAGCAGGAAGTaGTCCTGGTCGGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGQVSRK*SWSVLI
Trigger: GATCAGCACCGACCAGGACCACTTCCTGCTGACCTG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGTCCCAGCAAACCTCTaGGCTCCACTTGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLVPANL*APLAGT
Trigger: CGTCCCAGCAAGTGGAGCCCAGAGGTTTGCTGGGAC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTCAAAGGAGACCGAGCTaGCCACCTCCTTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGQRRPS*PPPSSP
Trigger: AGGTGAGGAAGGAGGTGGCCAGCTCGGTCTCCTTTG...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTACGATGTATTGGCCGTaGGTCGCGGGGTCGGGCACG +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTTMYWP*VAGSGT
Trigger: CGTGCCCGACCCCGCGACCCACGGCCAATACATCGT...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGCTCTTGCTGGGGTTaGGGATCTTCTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGSCWG*GSSPPT
Trigger: AGTGGGAGGAGAAGATCCCCAACCCCAGCAAGAGCC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCCGTTCTGGAACAGGTaGCTCTTGCTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLPFWNR*LLLGLG
Trigger: CCCCAACCCCAGCAAGAGCCACCTGTTCCAGAACGG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTCCACGGCCCCTGGTGTaGGGGACTCCCGCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTPRPLV*GTPASE
Trigger: TTCACTAGCGGGAGTCCCCCACACCAGGGGCCGTGG...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTCTCCCTGCAGCCCCCTaGCTCGGCCTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTLPAAP*LGLLST
Trigger: AGTGGAGAGAAGGCCGAGCCAGGGGGCTGCAGGGAG...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGCCCAGGACATAAGCTaGGGGTCTGGTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLAQDIS*GSGLRG
Trigger: TCCCCTCAGACCAGACCCCCAGCTTATGTCCTGGGC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTGTTCCTTGGTGACCTaGGGGACCGGCCCTCAATTG +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGCSLVT*GTGPQL
Trigger: CAATTGAGGGCCGGTCCCCCAGGTCACCAAGGAACA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGGGTCCTGGTCGGTGCTaGTCTGCAGGTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVGPGRC*SAGPWA
Trigger: AGCCCAGGGACCTGCAGATCAGCACCGACCAGGACC...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTCTTGCTGGGACGTCCTaGGAGCCGAGAACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSLAGTS*EPRTWG
Trigger: GCCCCAGGTTCTCGGCTCTCAGGACGTCCCAGCAAG...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTACTTGCTGGGACGTCCTaGGAGCCGAGAACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLLAGTS*EPRTWG
Trigger: GCCCCAGGTTCTCGGCTCTCAGGACGTCCCAGCAAG...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCATCCTTGGTCACGTTaGGGGATGGAGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLHPWSR*GMEGPS
Trigger: AGATGGCCCCTCCATCCCTCAACGTGACCAAGGATG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCCAGGTAGGGCCCATTaGAGTCAAAGCTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGPGRAH*SQSWKP
Trigger: AGGCTTCCAGCTTTGACTTCAATGGGCCCTACCTGG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTAGGATTGTTCCTTGGTaGCCTGGGGGACCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTRIVPW*PGGPAL
Trigger: GAGGGCCGGTCCCCCAGGTCACCAAGGAACAATCCT...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGGCCTGGGGGCTTCTTaGCTTGAAAAGCCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGGLGAS*LEKPGL
Trigger: TAGACCAGGCTTTTCAAGTCAAGAAGCCCCCAGGCC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTTCCCTGAGCCTCACTaGGCGTGCCCAGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTFPEPH*ACPVLC
Trigger: GCACAGGACTGGGCACGCTCAGTGAGGCTCAGGGAA...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGTCTCCTCCCACTTTCTaGGCAGCCTGTACCCGTAGA +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGSPPTF*AACTRR
Trigger: TCTACGGGTACAGGCTGCGCAGAAAGTGGGAGGAGA...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGGGGACCAGTTGCACCTaGCCCCCAGCAGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEEGTSCT*PPAGRH
Trigger: GTGTCTGCCTGCTGGGGGGCAGGTGCAACTGGTCCC...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTCAGGTCCCGCCAGCCTaGCCACCACTTGGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSQVPPA*PPLGPL
Trigger: TAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTG...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCTGGGCTCAGGAGGCTaGACATGCTGGGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPLGSGG*TCWVRV
Trigger: CACTCTGACCCAGCATGTCCAGCCTCCTGAGCCCAG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGAGCAGGAAGTGGTCCTaGTCGGTGCTGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLSRKWS*SVLICR
Trigger: CCTGCAGATCAGCACCGACCAGGACCACTTCCTGCT...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCAGGTCAGCAGGAAGTaGTCCTGGTCGGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLQVSRK*SWSVLI
Trigger: GATCAGCACCGACCAGGACCACTTCCTGCTGACCTG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTGTTGGAGAGGAGGATaGCTGCGTCCTCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGCWRGG*LRPPKS
Trigger: ACTCTTGGGAGGACGCAGCCATCCTCCTCTCCAACA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTAAGCACTCCAGGTTCTaGGGCTGGGCCTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPKHSRF*GWASSP
Trigger: AGGGGATGAGGCCCAGCCCCAGAACCTGGAGTGCTT...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCGGGCACGGGAATCTaGCAGTGGTGCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTSGTGI*QWCLVW
Trigger: CCACACCAGGCACCACTGCCAGATTCCCGTGCCCGA...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTACGATGTATTGGCCGTaGGTCGCGGGGTCGGGCACG +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSTMYWP*VAGSGT
Trigger: CGTGCCCGACCCCGCGACCCACGGCCAATACATCGT...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GAGCGCAGGGAGAGAAGTGATTTGCTGAAGGTCAAGGGGGCCGGAGCAAGGCTACCCTGGCCCAGTACCTaGTGGAGGGCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ERRERSDLLKVKGAGARLPWPST*WRAPGL
Trigger: CAGCCCTGGAGCCCTCCACCAGGTACTGGGCCAGGG...TAGCCTTGCTCCGGCCCCCTTGACCTTCAGCAAATCACTTCTCTCCCTGCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTACAGGTGGCTCTTGCTaGGGTTGGGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGTGGSC*GWGSSP
Trigger: AGGAGAAGATCCCCAACCCCAGCAAGAGCCACCTGT...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGTCTGCGCTCCCGTTCTaGAACAGGTGGCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLSALPF*NRWLLL
Trigger: CAGCAAGAGCCACCTGTTCCAGAACGGGAGCGCAGA...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTCCACGGCCCCTGGTGTaGGGGACTCCCGCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSPRPLV*GTPASE
Trigger: TTCACTAGCGGGAGTCCCCCACACCAGGGGCCGTGG...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTTGTGGGGGCTCCGGCTaGCCCAGGATGTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSCGGSG*PRMSGR
Trigger: CCTACCTGACATCCTGGGCCAGCCGGAGCCCCCACA...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTACAGGGACCCTGGAGGTaGGGACTTCTGGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLQGPWR*GLLAPT
Trigger: GGTGGGAGCCAGAAGTCCCCACCTCCAGGGTCCCTG...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGTTCCACGGCCTGTCCTaGTCCCATCGCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVFHGLS*SHRLGQ
Trigger: CTGGCCCAGGCGATGGGACCAGGACAGGCCGTGGAA...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGGGGCTGTGGGGATGTTaGGGACACATCTGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVGLWGC*GHICRA
Trigger: CGCCCGGCAGATGTGTCCCCAACATCCCCACAGCCC...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGTCCTTAGTGTCCTaGAGTCCTGTGTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPGSLVS*SPVFLP
Trigger: GGGCAGGAACACAGGACTTCAGGACACTAAGGACCC...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp GAGCGCAGGGAGAGAAGTGATTTGCTGAAGGTCAAGGGGGCCGGAGCAAGGCTAGGTCCTGGTCGGTGCTaGTCTGCAGGTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ERRERSDLLKVKGAGARLGPGRC*SAGPWA
Trigger: AGCCCAGGGACCTGCAGATCAGCACCGACCAGGACC...TAGCCTTGCTCCGGCCCCCTTGACCTTCAGCAAATCACTTCTCTCCCTGCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGTCTGCCCTCCTTGGCTaGACAGAGACGATGTATTGG +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGSALLG*TETMYW
Trigger: CCAATACATCGTCTCTGTTCAGCCAAGGAGGGCAGA...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCTCTATGGTGAGAGGTaGCACCTCGCTGTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPLYGER*HLAVPE
Trigger: TTCGGGGACAGCGAGGTGTCACCTCTCACCATAGAG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGACAGACGAGGCCCCTaGGTTTGGGGTGAATACCAG +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPDRRGP*VWGEYQ
Trigger: CTGGTATTCACCCCAAACTCAGGGGCCTCGTCTGTC...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGGGGCTTCTTGACTTaGAAAGCCTGGTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGGFLT*KAWSRF
Trigger: GAACCTAGACCAGGCTTTTCAAGTCAAGAAGCCCCC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGTCTGGACTCCTCTCCTaGTGTTCCCCAGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVSGLLS*CSPGPA
Trigger: GGCGGGACCTGGGGAACATCAGGAGAGGAGTCCAGA...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCTTTGCAGAAATGACTaGGGAAGGTCAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLLCRND*GRSGGR
Trigger: CCTCCCGCCTGACCTTCCTCAGTCATTTCTGCAAAG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGAGAGAAGTGATTTGCTaGAGGTCAAGGGGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLREVIC*RSRGPE
Trigger: CTCCGGCCCCCTTGACCTTCAGCAAATCACTTCTCT...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGCGCAGGGAGAGAAGTaGTTTGCTGAAGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLAQGEK*FAEGQG
Trigger: CCCTTGACCTTCAGCAAATCACTTCTCTCCCTGCGC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTAGGAGGGTCTCGGTCTTaGTGTCCTTCCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLGGSRS*CPSTWP
Trigger: CGGCCACGTGGAAGGACAGCAAGACCGAGACCCTCC...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGAACAGGTGGCTCTTaGTGGGGTTGGGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLGTGGS*WGWGSS
Trigger: AGAAGATCCCCAACCCCAGCAAGAGCCACCTGTTCC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGGTGGATCACAGACATaGTTGGGGTCCTCTATGGTG +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGGGSQT*LGSSMV
Trigger: CACCATAGAGGACCCCAAGCATGTCTGTGATCCACC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp GGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCAGTCTGATAAGGCTCAGGGAGGGACTCCCTaGAGCCCCCTGGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GSPHKSSTQPAASQSDKAQGGTP*SPLARP
Trigger: AGGCCGAGCCAGGGGGCTGCAGGGAGTCCCTCCCTG...AGCCTTATCAGACTGAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTCCCTCTCCATCCCCTTaGCTGTCTAGGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSPSPSP*LSRPGG
Trigger: ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGG...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp GAGACAACTAGCAGGGCTCCCCAGAAGCTCCCAAACAGTCTCTCATGTGCGTCCCCTAACCCCCACGGGTaGCCACCTGGTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ETTSRAPQKLPNSLSCASPNPHG*PPGASH
Trigger: GTGGGAGGCACCAGGTGGGCACCCGTGGGGGTTAGG...GGACGCACATGAGAGACTGTTTGGGAGCTTCTGGGGAGCCCTGCTAGTTGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp GACTGCCGGGGACAGGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCGGAGGCTGGACATGCTaGGTCAGAGTGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: DCRGQAAHTSPQHNQPHLGGWTC*VRVTVS
Trigger: GCTCACCGTCACTCTGACCCAGCATGTCCAGCCTCC...GAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTAGCAGGAAGTGGTCCTaGTCGGTGCTGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPSRKWS*SVLICR
Trigger: CCTGCAGATCAGCACCGACCAGGACCACTTCCTGCT...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GACTGCCGGGGACAGGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCGTCCCAGCAAACCTCTaGGCTCCACTTGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: DCRGQAAHTSPQHNQPHLVPANL*APLAGT
Trigger: CGTCCCAGCAAGTGGAGCCCAGAGGTTTGCTGGGAC...GAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTAAGCACTCCAGGTTCTaGGGCTGGGCCTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTKHSRF*GWASSP
Trigger: AGGGGATGAGGCCCAGCCCCAGAACCTGGAGTGCTT...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGCTCTTGCTGGGGTTaGGGATCTTCTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPGSCWG*GSSPPT
Trigger: AGTGGGAGGAGAAGATCCCCAACCCCAGCAAGAGCC...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTCCGTTCTGGAACAGGTaGCTCTTGCTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTPFWNR*LLLGLG
Trigger: CCCCAACCCCAGCAAGAGCCACCTGTTCCAGAACGG...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGTTTCTCAGGTGTGTaGGAGGCGGCAGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEECFSGV*EAAGGP
Trigger: AGGCCCGCCTGCCGCCTCCCACACACCTGAGAAACA...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGCTCCAGGGGGTCCACTaGCCAGCCCAGGACATAAGC +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEELQGVH*PAQDIS
Trigger: GCTTATGTCCTGGGCTGGCCAGTGGACCCCCTGGAG...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGAGGGAGAGTTGCCTaGTCTATCTGGAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLGGRVA*SIWKSG
Trigger: GCCACTCTTCCAGATAGACCAGGCAACTCTCCCTCC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTAGCCTGCATCTGGGCTaGGCTTGTAGAATAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGSLHLG*ACRIGQ
Trigger: TTGGCCTATTCTACAAGCCCAGCCCAGATGCAGGCT...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406230.5
CDS-3UTR TCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTGGGTCCTTAGTGTCCTaGAGTCCTGTGTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTGSLVS*SPVFLP
Trigger: GGGCAGGAACACAGGACTTCAGGACACTAAGGACCC...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTAGGGCATGTCATCACTaGGGTCACAGGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPRACHH*GHRTLA
Trigger: AGCCAGTGTCCTGTGACCTCAGTGATGACATGCCCT...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCCAGGTAGGGCCCATTaGAGTCAAAGCTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPPGRAH*SQSWKP
Trigger: AGGCTTCCAGCTTTGACTTCAATGGGCCCTACCTGG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTAGGGCTTTGAAGAGCTaGATGACGGGCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSRALKS*MTGTWG
Trigger: GCCCCAGGTGCCCGTCATTCAGCTCTTCAAAGCCCT...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTTGTTGGGGACACATCTaGCGGGCGTTCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSCWGHI*RAFPWV
Trigger: AACCCAGGGGAACGCCCGGCAGATGTGTCCCCAACA...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTAACCATAATCCCTGGTaGAGGCCCAGGCATAGATCA +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGNHNPW*RPRHRS
Trigger: TGATCTATGCCTGGGCCTGCACCAGGGATTATGGTT...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGCTGGGCTCAGGAGGCTaGACATGCTGGGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEELGSGG*TCWVRV
Trigger: CACTCTGACCCAGCATGTCCAGCCTCCTGAGCCCAG...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTAAACTCCAGATCCCCTaGGGACAACCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPKLQIP*GQPVAL
Trigger: CAGAGCCACTGGTTGTCCCCAGGGGATCTGGAGTTT...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGATGGAGGGGCCATCTaGATGTTCACTGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGDGGAI*MFTELF
Trigger: AAAGAGCTCAGTGAACATCCAGATGGCCCCTCCATC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGTCACGTTGAGGGATaGAGGGGCCATCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPGHVEG*RGHLDV
Trigger: AACATCCAGATGGCCCCTCCATCCCTCAACGTGACC...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGTCAGGCCCAGATGGTaGATCACAGACATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPVRPRW*ITDMLG
Trigger: CCCAAGCATGTCTGTGATCCACCATCTGGGCCTGAC...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp GAGACAACTAGCAGGGCTCCCCAGAAGCTCCCAAACAGTCTCTCATGTGCGTCCCTCCCTGCAGCCCCCTaGCTCGGCCTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ETTSRAPQKLPNSLSCASLPAAP*LGLLST
Trigger: AGTGGAGAGAAGGCCGAGCCAGGGGGCTGCAGGGAG...GGACGCACATGAGAGACTGTTTGGGAGCTTCTGGGGAGCCCTGCTAGTTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp GAGACAACTAGCAGGGCTCCCCAGAAGCTCCCAAACAGTCTCTCATGTGCGTCCGGGATGGGGGCAGGCTaGCCAGGGCATGTCATCACT +
Preference number: 4 (lower is better)
Translates to: ETTSRAPQKLPNSLSCASGMGAG*PGHVIT
Trigger: AGTGATGACATGCCCTGGTCAGCCTGCCCCCATCCC...GGACGCACATGAGAGACTGTTTGGGAGCTTCTGGGGAGCCCTGCTAGTTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGCATCCTTGGTCACGTTaGGGGATGGAGGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEEHPWSR*GMEGPS
Trigger: AGATGGCCCCTCCATCCCTCAACGTGACCAAGGATG...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTACTCTATGGTGAGAGGTaGCACCTCGCTGTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLLYGER*HLAVPE
Trigger: TTCGGGGACAGCGAGGTGTCACCTCTCACCATAGAG...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTATGGGGTCCTCTATGGTaGGAGGTGACACCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLWGPLW*EVTPRC
Trigger: ACAGCGAGGTGTCACCTCTCACCATAGAGGACCCCA...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGGACAGACGAGGCCCCTaGGTTTGGGGTGAATACCAG +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEEDRRGP*VWGEYQ
Trigger: CTGGTATTCACCCCAAACTCAGGGGCCTCGTCTGTC...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGGACAGACGAGGCCCCTaGGTTTGGGGTGAATACCAG +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVDRRGP*VWGEYQ
Trigger: CTGGTATTCACCCCAAACTCAGGGGCCTCGTCTGTC...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GACTGCCGGGGACAGGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCGGCCTGGGGGCTTCTTaGCTTGAAAAGCCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: DCRGQAAHTSPQHNQPHLGLGAS*LEKPGL
Trigger: TAGACCAGGCTTTTCAAGTCAAGAAGCCCCCAGGCC...GAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGTGAATACCAGGTCTaGAGAGGAGACATAACCAGA +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGEYQV*RGDITR
Trigger: TCTGGTTATGTCTCCTCTGCAGACCTGGTATTCACC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGAAACAGTCTCTCATGTaGGTCCCTTGCACCGCCCCC +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVKQSLM*VPCTAP
Trigger: GGGGGCGGTGCAAGGGACGCACATGAGAGACTGTTT...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGAGCAGGAAGTGGTCCTaGTCGGTGCTGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEESRKWS*SVLICR
Trigger: CCTGCAGATCAGCACCGACCAGGACCACTTCCTGCT...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTGTTGGAGAGGAGGATaGCTGCGTCCTCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTCWRGG*LRPPKS
Trigger: ACTCTTGGGAGGACGCAGCCATCCTCCTCTCCAACA...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGCAAAGGAGACCGAGCTaGCCACCTCCTTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVQRRPS*PPPSSP
Trigger: AGGTGAGGAAGGAGGTGGCCAGCTCGGTCTCCTTTG...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTTTCTCTGCCCTCCTTaGCTGAACAGAGACGATGTA +
Preference number: 4 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGFLCPP*LNRDDV
Trigger: TACATCGTCTCTGTTCAGCCAAGGAGGGCAGAGAAA...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTTCTGCGCTCCCGTTCTaGAACAGGTGGCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSSALPF*NRWLLL
Trigger: CAGCAAGAGCCACCTGTTCCAGAACGGGAGCGCAGA...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTGTCAGGCCCAGATGGTaGATCACAGACATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTVRPRW*ITDMLG
Trigger: CCCAAGCATGTCTGTGATCCACCATCTGGGCCTGAC...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCGTGTCAGGCCCAGATaGTGGATCACAGACATGCTT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPRVRPR*WITDML
Trigger: AAGCATGTCTGTGATCCACCATCTGGGCCTGACACG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp CCATGCCCATTTCTCGGAGTGACAATCGAGGCTAGTCTGAATTCCCTGAGCCTCCCACGGGTGCCCACCTaGTGCCTCCCACCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PCPFLGVTIEASLNSLSLPRVPT*CLPPLH
Trigger: GTGCAGAGGTGGGAGGCACCAGGTGGGCACCCGTGG...GAGGCTCAGGGAATTCAGACTAGCCTCGATTGTCACTCCGAGAAATGGGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTCCAGGTAGGGCCCATTaGAGTCAAAGCTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSPGRAH*SQSWKP
Trigger: AGGCTTCCAGCTTTGACTTCAATGGGCCCTACCTGG...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GACTGCCGGGGACAGGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCGGTGGATCACAGACATaGTTGGGGTCCTCTATGGTG +
Preference number: 4 (lower is better)
Translates to: DCRGQAAHTSPQHNQPHLGGSQT*LGSSMV
Trigger: CACCATAGAGGACCCCAAGCATGTCTGTGATCCACC...GAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGTGAATACCAGGTCTaGAGAGGAGACATAACCAGA +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLGEYQV*RGDITR
Trigger: TCTGGTTATGTCTCCTCTGCAGACCTGGTATTCACC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR GCA 90 bp CTTCTCTACATGACGTGGGGTCTCAAGGGACTGGAGGTCCCACAGACATCACTGATGTGCATCAGCGACTaGCGGGGACAGGCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LLYMTWGLKGLEVPQTSLMCISD*RGQAAH
Trigger: GTGGGCTGCCTGTCCCCGGCAGTCGCTGATGCACAT...CAGTGATGTCTGTGGGACCTCCAGTCCCTTGAGACCCCACGTCATGTAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTAAAACTCCAGATCCCCTaGGGACAACCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLKLQIP*GQPVAL
Trigger: CAGAGCCACTGGTTGTCCCCAGGGGATCTGGAGTTT...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GAGACAACTAGCAGGGCTCCCCAGAAGCTCCCAAACAGTCTCTCATGTGCGTCCAAGCACTCCAGGTTCTaGGGCTGGGCCTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: ETTSRAPQKLPNSLSCASKHSRF*GWASSP
Trigger: AGGGGATGAGGCCCAGCCCCAGAACCTGGAGTGCTT...GGACGCACATGAGAGACTGTTTGGGAGCTTCTGGGGAGCCCTGCTAGTTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTAACAGGTGGCTCTTGCTaGGGTTGGGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLTGGSC*GWGSSP
Trigger: AGGAGAAGATCCCCAACCCCAGCAAGAGCCACCTGT...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTACAGGTGGCTCTTGCTaGGGTTGGGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSTGGSC*GWGSSP
Trigger: AGGAGAAGATCCCCAACCCCAGCAAGAGCCACCTGT...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp CTTCTCTACATGACGTGGGGTCTCAAGGGACTGGAGGTCCCACAGACATCACTGACCTGGGGCACAGCCTaGCCTGGGGGCTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: LLYMTWGLKGLEVPQTSLTWGTA*PGGFLT
Trigger: AGTCAAGAAGCCCCCAGGCCAGGCTGTGCCCCAGGT...CAGTGATGTCTGTGGGACCTCCAGTCCCTTGAGACCCCACGTCATGTAGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp GACTGCCGGGGACAGGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCAGTAGACGTGGGCTCTaGACTCCTCTCCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: DCRGQAAHTSPQHNQPHLSRRGL*TPLLMF
Trigger: GAACATCAGGAGAGGAGTCCAGAGCCCACGTCTACT...GAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTGGAGGGAGAGTTGCCTaGTCTATCTGGAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSGGRVA*SIWKSG
Trigger: GCCACTCTTCCAGATAGACCAGGCAACTCTCCCTCC...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCATCTGGATGTTCACTaGGCTCTTTATGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: QAGGKASPLHPLACLGLGHLDVH*ALYVFL
Trigger: GAGAAACACATAAAGAGCTCAGTGAACATCCAGATG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR TCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTGTTAACTTCTCTACATaGCGTGGGGTCTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTVNFST*RGVSRD
Trigger: GTCCCTTGAGACCCCACGTCATGTAGAGAAGTTAAC...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GAGAGAAGTGATTTGCTGAAGGTCAAGGGGGCCGGAGCAAGGCTATCTCCTTTCGGAATCTGGCAGTGGTaGCTGGTGTGGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ERSDLLKVKGAGARLSPFGIWQW*LVWRLP
Trigger: CGGCAGCCTCCACACCAGGCACCACTGCCAGATTCC...GAAAGGAGATAGCCTTGCTCCGGCCCCCTTGACCTTCAGCAAATCACTTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp CTTCTCTACATGACGTGGGGTCTCAAGGGACTGGAGGTCCCACAGACATCACTGGCCTGTACCCGTAGATaGCACAGAAGCGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLYMTWGLKGLEVPQTSLACTRR*HRSGGP
Trigger: TGGCCCTCCGCTTCTGTGGCATCTACGGGTACAGGC...CAGTGATGTCTGTGGGACCTCCAGTCCCTTGAGACCCCACGTCATGTAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTAGGTGGATCACAGACATaGTTGGGGTCCTCTATGGTG +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLGGSQT*LGSSMV
Trigger: CACCATAGAGGACCCCAAGCATGTCTGTGATCCACC...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCAGTCTGATAAGGCTTGTTGGGGACACATCTaGCGGGCGTTCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GSPHKSSTQPAASQSDKACWGHI*RAFPWV
Trigger: AACCCAGGGGAACGCCCGGCAGATGTGTCCCCAACA...AGCCTTATCAGACTGAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp CACGGGTGCCCACCTGGTGCCTCCCACCTCTGCACCCAGATGAGAATCATGTCAGAGAATCATGTCATGTaGATCAGCGACTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: HGCPPGASHLCTQMRIMSENHVM*ISDCRG
Trigger: TCCCCGGCAGTCGCTGATGCACATGACATGATTCTC...TGACATGATTCTCATCTGGGTGCAGAGGTGGGAGGCACCAGGTGGGCACCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGCTTCTCTACATGACGTaGGGTCTCAAGGGACTGGAG +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVLLYMT*GLKGLE
Trigger: CTCCAGTCCCTTGAGACCCCACGTCATGTAGAGAAG...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGCTTCTCTACATGACGTaGGGTCTCAAGGGACTGGAG +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEELLYMT*GLKGLE
Trigger: CTCCAGTCCCTTGAGACCCCACGTCATGTAGAGAAG...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTAAGAACCATAATCCCTaGTGCAGGCCCAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTKNHNP*CRPRHR
Trigger: TCTATGCCTGGGCCTGCACCAGGGATTATGGTTCTT...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCAGTCTGATAAGGCTCTCTATGGTGAGAGGTaGCACCTCGCTGTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: GSPHKSSTQPAASQSDKALYGER*HLAVPE
Trigger: TTCGGGGACAGCGAGGTGTCACCTCTCACCATAGAG...AGCCTTATCAGACTGAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp GAGACAACTAGCAGGGCTCCCCAGAAGCTCCCAAACAGTCTCTCATGTGCGTCCTCTCCTCCCACTTTCTaGGCAGCCTGTACCCGTAGA +
Preference number: 4 (lower is better)
Translates to: ETTSRAPQKLPNSLSCASSPPTF*AACTRR
Trigger: TCTACGGGTACAGGCTGCGCAGAAAGTGGGAGGAGA...GGACGCACATGAGAGACTGTTTGGGAGCTTCTGGGGAGCCCTGCTAGTTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGCCCTAAAGCATATATaGCTTTGGGGCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GQAGGKASPLHPLACLGLALKHI*LWGIFL
Trigger: AAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp GAGACAACTAGCAGGGCTCCCCAGAAGCTCCCAAACAGTCTCTCATGTGCGTCCCCCCTGCATCTGGGCTaGGCTTGTAGAATAGGCCAA +
Preference number: 4 (lower is better)
Translates to: ETTSRAPQKLPNSLSCASPLHLG*ACRIGQ
Trigger: TTGGCCTATTCTACAAGCCCAGCCCAGATGCAGGGG...GGACGCACATGAGAGACTGTTTGGGAGCTTCTGGGGAGCCCTGCTAGTTGTCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGGATGGAGGGGCCATCTaGATGTTCACTGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: PLICGRWEGELPGLSGRVDGGAI*MFTELF
Trigger: AAAGAGCTCAGTGAACATCCAGATGGCCCCTCCATC...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp CACGGGTGCCCACCTGGTGCCTCCCACCTCTGCACCCAGATGAGAATCATGTCAACCTCTGCACCCAGATaGGAATCATGTCATGTGCAT +
Preference number: 4 (lower is better)
Translates to: HGCPPGASHLCTQMRIMSTSAPR*ESCHVH
Trigger: ATGCACATGACATGATTCTCATCTGGGTGCAGAGGT...TGACATGATTCTCATCTGGGTGCAGAGGTGGGAGGCACCAGGTGGGCACCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp GGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCAGTCTGATAAGGCTGGTGGGAGGGAGAGTTaGCTGGTCTATCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GSPHKSSTQPAASQSDKAGGRES*LVYLEE
Trigger: CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACC...AGCCTTATCAGACTGAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp TGCCCATTTCTCGGAGTGACAATCGAGGCTAGTCTGAATTCCCTGAGCCTCACTACAGAGACGATGTATTaGCCGTGGGTCGCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: CPFLGVTIEASLNSLSLTTETMY*PWVAGS
Trigger: CGACCCCGCGACCCACGGCCAATACATCGTCTCTGT...AGTGAGGCTCAGGGAATTCAGACTAGCCTCGATTGTCACTCCGAGAAATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGTGTCTTTCCTGTACTaGATCTCAAATGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPVSFLY*ISNVWS
Trigger: AGACCACACATTTGAGATCCAGTACAGGAAAGACAC...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CCA 90 bp TGCCCATTTCTCGGAGTGACAATCGAGGCTAGTCTGAATTCCCTGAGCCTCACTGCCCAGGACATAAGCTaGGGGTCTGGTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: CPFLGVTIEASLNSLSLTAQDIS*GSGLRG
Trigger: TCCCCTCAGACCAGACCCCCAGCTTATGTCCTGGGC...AGTGAGGCTCAGGGAATTCAGACTAGCCTCGATTGTCACTCCGAGAAATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTAGGACAAACACTGCTTTaGAATGGGAGGACCTTTGTA +
Preference number: 4 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLGQTLL*NGRTFV
Trigger: TACAAAGGTCCTCCCATTGCAAAGCAGTGTTTGTCC...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GAGAGAAGTGATTTGCTGAAGGTCAAGGGGGCCGGAGCAAGGCTATCTCCTTTCGGTCACGTTGAGGGATaGAGGGGCCATCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: ERSDLLKVKGAGARLSPFGHVEG*RGHLDV
Trigger: AACATCCAGATGGCCCCTCCATCCCTCAACGTGACC...GAAAGGAGATAGCCTTGCTCCGGCCCCCTTGACCTTCAGCAAATCACTTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp GGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCAGTCTGATAAGGCTCGTGTCAGGCCCAGATaGTGGATCACAGACATGCTT +
Preference number: 4 (lower is better)
Translates to: GSPHKSSTQPAASQSDKARVRPR*WITDML
Trigger: AAGCATGTCTGTGATCCACCATCTGGGCCTGACACG...AGCCTTATCAGACTGAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGCATCTGGATGTTCACTaGGCTCTTTATGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEEHLDVH*ALYVFL
Trigger: GAGAAACACATAAAGAGCTCAGTGAACATCCAGATG...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCGGTGCGGGAGGTCCTaGCCCTCACCCTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TDLGEKHSTICERLYVNSRCGRS*PSPWPS
Trigger: ACTGGGCCAGGGTGAGGGTCAGGACCTCCCGCACCG...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGGCCCTAAAGCATATATaGCTTTGGGGCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SPSSVAGGRESCLVYLEEALKHI*LWGIFL
Trigger: AAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGC...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TGCCCATTTCTCGGAGTGACAATCGAGGCTAGTCTGAATTCCCTGAGCCTCACTCAGGCCTCTGTGTGGTaGGAGAGACCAGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CPFLGVTIEASLNSLSLTQASVW*ERPVFF
Trigger: GAAGAAGACTGGTCTCTCCCACCACACAGAGGCCTG...AGTGAGGCTCAGGGAATTCAGACTAGCCTCGATTGTCACTCCGAGAAATGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACCCTCCCAGGAGCAGCTaGGCACGGCGGCCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYPPRSS*ARRPRQ
Trigger: TTGACGGGGCCGCCGTGCTCAGCTGCTCCTGGGAGG...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GAGAGAAGTGATTTGCTGAAGGTCAAGGGGGCCGGAGCAAGGCTATCTCCTTTCTTTGGCAGTTTCCCCTaGCTTTTCCGCAGTAGACGT +
Preference number: 4 (lower is better)
Translates to: ERSDLLKVKGAGARLSPFFGSFP*LFRSRR
Trigger: ACGTCTACTGCGGAAAAGTCAGGGGAAACTGCCAAA...GAAAGGAGATAGCCTTGCTCCGGCCCCCTTGACCTTCAGCAAATCACTTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCTCCAGGTTCTGGGGCTaGGCCTCATCCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSSRFWG*ASSPGW
Trigger: CCAGCCAGGGGATGAGGCCCAGCCCCAGAACCTGGA...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACTCTGGCAGTGGTGCCTaGTGTGGAGGCTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHSGSGA*CGGCRA
Trigger: GGCTCGGCAGCCTCCACACCAGGCACCACTGCCAGA...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACCCTGGTCCCATCGCCTaGGCCAGAGGGACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHPGPIA*ARGTSC
Trigger: GCAACTGGTCCCTCTGGCCCAGGCGATGGGACCAGG...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp CATAGATCAGCAGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTAACACTGCTTTGCAATaGGAGGACCTTTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: HRSAAPHLWPVGGRVAWSNTALQ*EDLCKS
Trigger: AGATTTACAAAGGTCCTCCCATTGCAAAGCAGTGTT...AGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCTGCTGATCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACTCTGGACTCCTCTCCTaGTGTTCCCCAGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHSGLLS*CSPGPA
Trigger: GGCGGGACCTGGGGAACATCAGGAGAGGAGTCCAGA...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCCGGGATGGTTTCTTCTaGCCCTGCCAGGCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSRDGFF*PCQAAL
Trigger: GAGCGCAGCCTGGCAGGGGCAGAAGAAACCATCCCG...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACCGGGATGGTTTCTTCTaGCCCTGCCAGGCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHRDGFF*PCQAAL
Trigger: GAGCGCAGCCTGGCAGGGGCAGAAGAAACCATCCCG...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGAGCTCAGGGAAGCGGCTaGCCCACGGCCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRAQGSG*PTAPGV
Trigger: CACACCAGGGGCCGTGGGGCAGCCGCTTCCCTGAGC...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGCAGGGAGGGACTCCCTaGAGCCCCCTGGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTQGGTP*SPLARP
Trigger: AGGCCGAGCCAGGGGGCTGCAGGGAGTCCCTCCCTG...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACCCTGGGGACAACCAGTaGCTCTGGGGACTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHPGDNQ*LWGLPR
Trigger: CCTTGGGAGTCCCCAGAGCCACTGGTTGTCCCCAGG...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCCTGGGCTCCACTTGCTaGGACGTCCTGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSLGSTC*DVLRAE
Trigger: CTCGGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAG...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TGCCCATTTCTCGGAGTGACAATCGAGGCTAGTCTGAATTCCCTGAGCCTCACTGATGGAGGGGCCATCTaGATGTTCACTGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: CPFLGVTIEASLNSLSLTDGGAI*MFTELF
Trigger: AAAGAGCTCAGTGAACATCCAGATGGCCCCTCCATC...AGTGAGGCTCAGGGAATTCAGACTAGCCTCGATTGTCACTCCGAGAAATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTCAGGGACCCTGGAGGTaGGGACTTCTGGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFQGPWR*GLLAPT
Trigger: GGTGGGAGCCAGAAGTCCCCACCTCCAGGGTCCCTG...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTTTCCACGGCCTGTCCTaGTCCCATCGCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TDLGEKHSTICERLYVNSFHGLS*SHRLGQ
Trigger: CTGGCCCAGGCGATGGGACCAGGACAGGCCGTGGAA...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACCTGCCCACCTGCAGGTaGTGTGGCTGGTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHLPTCR*CGWCSR
Trigger: ACGACTACACCAGCCACATCACCTGCAGGTGGGCAG...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACCCTGGTCTAGGTTCTTaGTCTCAGGACCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHPGLGS*SQDRVP
Trigger: CGGGACCCGGTCCTGAGATCAAGAACCTAGACCAGG...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGGGGCTGGCAGGGCCATaGTGTGGGCGTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTGLAGP*CGRSGG
Trigger: CCCTCCAGAACGCCCACAGCATGGCCCTGCCAGCCC...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACGACAACCAGTGGCTCTaGGGACTCCCAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHDNQWL*GLPRAT
Trigger: TGTGGCCCTTGGGAGTCCCCAGAGCCACTGGTTGTC...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACTGGCCTGGGAGGTGTTaGAGAGGAGGATGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHWPGRC*RGGWLR
Trigger: ACGCAGCCATCCTCCTCTCCAACACCTCCCAGGCCA...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACGTCCCAGCAAACCTCTaGGCTCCACTTGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHVPANL*APLAGT
Trigger: CGTCCCAGCAAGTGGAGCCCAGAGGTTTGCTGGGAC...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGCAGTGGTGCCTGGTGTaGAGGCTGCCGAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTQWCLV*RLPSPS
Trigger: GGAGGGGCTCGGCAGCCTCCACACCAGGCACCACTG...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGACCCTGGCCCAGTACCTaGTGGAGGGCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRPWPST*WRAPGL
Trigger: CAGCCCTGGAGCCCTCCACCAGGTACTGGGCCAGGG...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCAGGTGCTGCTGGGCATaGGGTGCTCTGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KHSTICERLYVNSQKDLIRCCWA*GALAPG
Trigger: CCCTGGGGCCAGAGCACCTCATGCCCAGCAGCACCT...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTATAGCCCTCAAACCCTaGCTTCACAGGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFIALKP*LHRAWG
Trigger: GCCCCAGGCCCTGTGAAGTCAGGGTTTGAGGGCTAT...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGCCTCCCCAGGCTTGTTaGCCTCCCAAGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTPPQAC*PPKGAE
Trigger: CTCTGCCCCCTTGGGAGGTCAACAAGCCTGGGGAGG...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACCCTCTGGGCTCCACTTaGTGGGACGTCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYPLGST*WDVLRA
Trigger: GGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGG...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGGGGACCAGTTGCACCTaGCCCCCAGCAGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTGTSCT*PPAGRH
Trigger: GTGTCTGCCTGCTGGGGGGCAGGTGCAACTGGTCCC...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTGGAGGCTGGACATGCTaGGTCAGAGTGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFGGWTC*VRVTVS
Trigger: GCTCACCGTCACTCTGACCCAGCATGTCCAGCCTCC...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACCAGGTCAGCAGGAAGTaGTCCTGGTCGGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHQVSRK*SWSVLI
Trigger: GATCAGCACCGACCAGGACCACTTCCTGCTGACCTG...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTTGGCCTGGGAGGTGTTaGAGAGGAGGATGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFWPGRC*RGGWLR
Trigger: ACGCAGCCATCCTCCTCTCCAACACCTCCCAGGCCA...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGAGGCCCCAGGGTGGCCTaGGAGGTGTTGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRGPRVA*EVLERR
Trigger: CCTCCTCTCCAACACCTCCCAGGCCACCCTGGGGCC...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCGGCCCCAGGGTGGCCTaGGAGGTGTTGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KHSTICERLYVNSQKDLIGPRVA*EVLERR
Trigger: CCTCCTCTCCAACACCTCCCAGGCCACCCTGGGGCC...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCTCTGGCAGTGGTGCCTaGTGTGGAGGCTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGSGSGA*CGGCRA
Trigger: GGCTCGGCAGCCTCCACACCAGGCACCACTGCCAGA...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACTCGGGCACGGGAATCTaGCAGTGGTGCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYSGTGI*QWCLVW
Trigger: CCACACCAGGCACCACTGCCAGATTCCCGTGCCCGA...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCCGTTCTGGAACAGGTaGCTCTTGCTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TDLGEKHSTICERLYVNSPFWNR*LLLGLG
Trigger: CCCCAACCCCAGCAAGAGCCACCTGTTCCAGAACGG...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGCCTGGTCCCATCGCCTaGGCCAGAGGGACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTPGPIA*ARGTSC
Trigger: GCAACTGGTCCCTCTGGCCCAGGCGATGGGACCAGG...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTGGACCGGCCCTCAATTaGAGGGAGCTCCACATAGCC +
Preference number: 4 (lower is better)
Translates to: TDLGEKHSTICERLYVNSGPALN*RELHIA
Trigger: GGCTATGTGGAGCTCCCTCCAATTGAGGGCCGGTCC...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTTGCCGGGCGTTCCCCTaGGTTCAGGACAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFCRAFP*VQDRAF
Trigger: AAAAGCCCTGTCCTGAACCCAGGGGAACGCCCGGCA...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GAGACAACTAGCAGGGCTCCCCAGAAGCTCCCAAACAGTCTCTCATGTGCGTCCAAGCATATATGCCTTTaGGGCATTTTCCTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: ETTSRAPQKLPNSLSCASKHICL*GIFLCL
Trigger: CAAACAAAGGAAAATGCCCCAAAGGCATATATGCTT...GGACGCACATGAGAGACTGTTTGGGAGCTTCTGGGGAGCCCTGCTAGTTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACCTGCCCACCTGCAGGTaGTGTGGCTGGTGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYLPTCR*CGWCSR
Trigger: ACGACTACACCAGCCACATCACCTGCAGGTGGGCAG...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACAGGGCATGTCATCACTaGGGTCACAGGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHRACHH*GHRTLA
Trigger: AGCCAGTGTCCTGTGACCTCAGTGATGACATGCCCT...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGGGGATGGGGGCAGGCTaGCCAGGGCATGTCATCACT +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTGMGAG*PGHVIT
Trigger: AGTGATGACATGCCCTGGTCAGCCTGCCCCCATCCC...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACGGCCTGGGGGCTTCTTaGCTTGAAAAGCCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHGLGAS*LEKPGL
Trigger: TAGACCAGGCTTTTCAAGTCAAGAAGCCCCCAGGCC...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGCCTCTGGGCTCCACTTaGTGGGACGTCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTPLGST*WDVLRA
Trigger: GGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGG...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACGCCTGTACCCGTAGATaGCACAGAAGCGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYACTRR*HRSGGP
Trigger: TGGCCCTCCGCTTCTGTGGCATCTACGGGTACAGGC...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACTGGGGGCCAAAGCTCTaGGCTCCCGTTCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYWGPKL*APVLEQ
Trigger: CTGTTCCAGAACGGGAGCGCAGAGCTTTGGCCCCCA...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGACAGGTCCCGCCAGCCTaGCCACCACTTGGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRQVPPA*PPLGPL
Trigger: TAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTG...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACGACAACCAGTGGCTCTaGGGACTCCCAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYDNQWL*GLPRAT
Trigger: TGTGGCCCTTGGGAGTCCCCAGAGCCACTGGTTGTC...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGCTGGGCTCCACTTGCTaGGACGTCCTGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTLGSTC*DVLRAE
Trigger: CTCGGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAG...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACCCCCTGCATCTGGGCTaGGCTTGTAGAATAGGCCAA +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHPLHLG*ACRIGQ
Trigger: TTGGCCTATTCTACAAGCCCAGCCCAGATGCAGGGG...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCGGTCACGTTGAGGGATaGAGGGGCCATCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSGHVEG*RGHLDV
Trigger: AACATCCAGATGGCCCCTCCATCCCTCAACGTGACC...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGATGTGGGGGCTCCGGCTaGCCCAGGATGTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRCGGSG*PRMSGR
Trigger: CCTACCTGACATCCTGGGCCAGCCGGAGCCCCCACA...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCGGGCTGTGGGGATGTTaGGGACACATCTGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: KHSTICERLYVNSQKDLIGLWGC*GHICRA
Trigger: CGCCCGGCAGATGTGTCCCCAACATCCCCACAGCCC...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGAACCTGGGGCACAGCCTaGCCTGGGGGCTTCTTGACT +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRTWGTA*PGGFLT
Trigger: AGTCAAGAAGCCCCCAGGCCAGGCTGTGCCCCAGGT...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GAGAGAAGTGATTTGCTGAAGGTCAAGGGGGCCGGAGCAAGGCTATCTCCTTTCGCATTTTCCTTTGTTTaGCAGTTTCCCCTGACTTTT +
Preference number: 4 (lower is better)
Translates to: ERSDLLKVKGAGARLSPFAFSFV*QFPLTF
Trigger: AAAAGTCAGGGGAAACTGCCAAACAAAGGAAAATGC...GAAAGGAGATAGCCTTGCTCCGGCCCCCTTGACCTTCAGCAAATCACTTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCCCTGGTCTAGGTTCTTaGTCTCAGGACCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGPGLGS*SQDRVP
Trigger: CGGGACCCGGTCCTGAGATCAAGAACCTAGACCAGG...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCGGGGGCTTCTTGACTTaGAAAGCCTGGTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSGGFLT*KAWSRF
Trigger: GAACCTAGACCAGGCTTTTCAAGTCAAGAAGCCCCC...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCAGGGCTTTGAAGAGCTaGATGACGGGCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGRALKS*MTGTWG
Trigger: GCCCCAGGTGCCCGTCATTCAGCTCTTCAAAGCCCT...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGATGGTCGGTGCTGATCTaGAGGTCCCTGGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRWSVLI*RSLGSG
Trigger: TCCTGAGCCCAGGGACCTGCAGATCAGCACCGACCA...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGAGGAATCTGGCAGTGGTaGCTGGTGTGGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRGIWQW*LVWRLP
Trigger: CGGCAGCCTCCACACCAGGCACCACTGCCAGATTCC...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACCATTTCACAGGCTCTTaGGACCTCTCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYHFTGS*DLSLLA
Trigger: GGCCAGGAGGGAGAGGTCCCAAGAGCCTGTGAAATG...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCCTGGGCTCAGGAGGCTaGACATGCTGGGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGLGSGG*TCWVRV
Trigger: CACTCTGACCCAGCATGTCCAGCCTCCTGAGCCCAG...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGACCTGGGGACAACCAGTaGCTCTGGGGACTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRPGDNQ*LWGLPR
Trigger: CCTTGGGAGTCCCCAGAGCCACTGGTTGTCCCCAGG...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTAAACTCCAGATCCCCTaGGGACAACCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TDLGEKHSTICERLYVNSKLQIP*GQPVAL
Trigger: CAGAGCCACTGGTTGTCCCCAGGGGATCTGGAGTTT...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGACGGGAATCTGGCAGTaGTGCCTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTTGIWQ*CLVWRL
Trigger: CAGCCTCCACACCAGGCACCACTGCCAGATTCCCGT...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCACGGGAATCTGGCAGTaGTGCCTGGTGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGTGIWQ*CLVWRL
Trigger: CAGCCTCCACACCAGGCACCACTGCCAGATTCCCGT...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCACAGAGACGATGTATTaGCCGTGGGTCGCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGTETMY*PWVAGS
Trigger: CGACCCCGCGACCCACGGCCAATACATCGTCTCTGT...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTGTCAGGCCCAGATGGTaGATCACAGACATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFVRPRW*ITDMLG
Trigger: CCCAAGCATGTCTGTGATCCACCATCTGGGCCTGAC...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACCGTGTCAGGCCCAGATaGTGGATCACAGACATGCTT +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHRVRPR*WITDML
Trigger: AAGCATGTCTGTGATCCACCATCTGGGCCTGACACG...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGATGTTTCTCAGGTGTGTaGGAGGCGGCAGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRCFSGV*EAAGGP
Trigger: AGGCCCGCCTGCCGCCTCCCACACACCTGAGAAACA...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCCATAAGCTGGGGGTCTaGTCTGAGGGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGHKLGV*SEGRPR
Trigger: TCTGGGCCTCCCCTCAGACCAGACCCCCAGCTTATG...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCGCCCAGGACATAAGCTaGGGGTCTGGTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGAQDIS*GSGLRG
Trigger: TCCCCTCAGACCAGACCCCCAGCTTATGTCCTGGGC...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACAGTAGACGTGGGCTCTaGACTCCTCTCCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHSRRGL*TPLLMF
Trigger: GAACATCAGGAGAGGAGTCCAGAGCCCACGTCTACT...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGAATAGCCCTCAAACCCTaGCTTCACAGGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRIALKP*LHRAWG
Trigger: GCCCCAGGCCCTGTGAAGTCAGGGTTTGAGGGCTAT...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTGGGGGCTTCTTGACTTaGAAAGCCTGGTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: TDLGEKHSTICERLYVNSGGFLT*KAWSRF
Trigger: GAACCTAGACCAGGCTTTTCAAGTCAAGAAGCCCCC...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACGTTAACTTCTCTACATaGCGTGGGGTCTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHVNFST*RGVSRD
Trigger: GTCCCTTGAGACCCCACGTCATGTAGAGAAGTTAAC...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACCTTTGCAGAAATGACTaGGGAAGGTCAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYLCRND*GRSGGR
Trigger: CCTCCCGCCTGACCTTCCTCAGTCATTTCTGCAAAG...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGCATTTCACAGGCTCTTaGGACCTCTCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTHFTGS*DLSLLA
Trigger: GGCCAGGAGGGAGAGGTCCCAAGAGCCTGTGAAATG...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGAGGGTCTGCAGCGGGATaGTTTCTTCTGCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRGSAAG*FLLPLP
Trigger: TGGCAGGGGCAGAAGAAACCATCCCGCTGCAGACCC...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGAGGCTCTTGCTGGGGTTaGGGATCTTCTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRGSCWG*GSSPPT
Trigger: AGTGGGAGGAGAAGATCCCCAACCCCAGCAAGAGCC...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGACATAAGCTGGGGGTCTaGTCTGAGGGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRHKLGV*SEGRPR
Trigger: TCTGGGCCTCCCCTCAGACCAGACCCCCAGCTTATG...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGATGTTCCTTGGTGACCTaGGGGACCGGCCCTCAATTG +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRCSLVT*GTGPQL
Trigger: CAATTGAGGGCCGGTCCCCCAGGTCACCAAGGAACA...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGGGCATGTCATCACTaGGGTCACAGGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTRACHH*GHRTLA
Trigger: AGCCAGTGTCCTGTGACCTCAGTGATGACATGCCCT...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACTCTGCCCTCCTTGGCTaGACAGAGACGATGTATTGG +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYSALLG*TETMYW
Trigger: CCAATACATCGTCTCTGTTCAGCCAAGGAGGGCAGA...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGATGGGGTCCTCTATGGTaGGAGGTGACACCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRWGPLW*EVTPRC
Trigger: ACAGCGAGGTGTCACCTCTCACCATAGAGGACCCCA...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGATCTCCTCCCACTTTCTaGGCAGCCTGTACCCGTAGA +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRSPPTF*AACTRR
Trigger: TCTACGGGTACAGGCTGCGCAGAAAGTGGGAGGAGA...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCGGAACAGGTGGCTCTTaGTGGGGTTGGGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGGTGGS*WGWGSS
Trigger: AGAAGATCCCCAACCCCAGCAAGAGCCACCTGTTCC...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCGGTGGGAGGGAGAGTTaGCTGGTCTATCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGGGRES*LVYLEE
Trigger: CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACC...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGCAGGCCTCTGTGTGGTaGGAGAGACCAGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTQASVW*ERPVFF
Trigger: GAAGAAGACTGGTCTCTCCCACCACACAGAGGCCTG...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGATGTTGGAGAGGAGGATaGCTGCGTCCTCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRCWRGG*LRPPKS
Trigger: ACTCTTGGGAGGACGCAGCCATCCTCCTCTCCAACA...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCCAAAGGAGACCGAGCTaGCCACCTCCTTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: KHSTICERLYVNSQKDLIQRRPS*PPPSSP
Trigger: AGGTGAGGAAGGAGGTGGCCAGCTCGGTCTCCTTTG...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCTTTCTCTGCCCTCCTTaGCTGAACAGAGACGATGTA +
Preference number: 4 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSFLCPP*LNRDDV
Trigger: TACATCGTCTCTGTTCAGCCAAGGAGGGCAGAGAAA...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCTCTGCGCTCCCGTTCTaGAACAGGTGGCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KHSTICERLYVNSQKDLISALPF*NRWLLL
Trigger: CAGCAAGAGCCACCTGTTCCAGAACGGGAGCGCAGA...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGATGTTCCTTGGTGACCTaGGGGACCGGCCCTCAATTG +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRCSLVT*GTGPQL
Trigger: CAATTGAGGGCCGGTCCCCCAGGTCACCAAGGAACA...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTAAGAACCATAATCCCTaGTGCAGGCCCAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: TDLGEKHSTICERLYVNSKNHNP*CRPRHR
Trigger: TCTATGCCTGGGCCTGCACCAGGGATTATGGTTCTT...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCGGTGCCTCCCACCTCTaGACCCAGATGAGAATCATG +
Preference number: 4 (lower is better)
Translates to: KHSTICERLYVNSQKDLIGASHL*TQMRIM
Trigger: CATGATTCTCATCTGGGTGCAGAGGTGGGAGGCACC...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR GCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGACGACCCCCAATACCATaGCCATTTCTCGGAGTGACA +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRRPPIP*PFLGVT
Trigger: TGTCACTCCGAGAAATGGGCATGGTATTGGGGGTCG...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR TCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCTCTGCCCTCCTTGGCTaGACAGAGACGATGTATTGG +
Preference number: 4 (lower is better)
Translates to: KHSTICERLYVNSQKDLISALLG*TETMYW
Trigger: CCAATACATCGTCTCTGTTCAGCCAAGGAGGGCAGA...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGAAACCATAATCCCTGGTaGAGGCCCAGGCATAGATCA +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRNHNPW*RPRHRS
Trigger: TGATCTATGCCTGGGCCTGCACCAGGGATTATGGTT...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTGGACAAACACTGCTTTaGAATGGGAGGACCTTTGTA +
Preference number: 4 (lower is better)
Translates to: TDLGEKHSTICERLYVNSGQTLL*NGRTFV
Trigger: TACAAAGGTCCTCCCATTGCAAAGCAGTGTTTGTCC...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCGACAAACAACAGATTTaGGGGAAAAACACTCCACCA +
Preference number: 4 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSDKQQI*GKNTPP
Trigger: TGGTGGAGTGTTTTTCCCCCAAATCTGTTGTTTGTC...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTCATCTGGATGTTCACTaGGCTCTTTATGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFHLDVH*ALYVFL
Trigger: GAGAAACACATAAAGAGCTCAGTGAACATCCAGATG...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR TCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCTTTGGCAGTTTCCCCTaGCTTTTCCGCAGTAGACGT +
Preference number: 4 (lower is better)
Translates to: KHSTICERLYVNSQKDLIFGSFP*LFRSRR
Trigger: ACGTCTACTGCGGAAAAGTCAGGGGAAACTGCCAAA...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR GCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCGGTGAATACCAGGTCTaGAGAGGAGACATAACCAGA +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGGEYQV*RGDITR
Trigger: TCTGGTTATGTCTCCTCTGCAGACCTGGTATTCACC...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGATTTCTCTGCCCTCCTTaGCTGAACAGAGACGATGTA +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRFLCPP*LNRDDV
Trigger: TACATCGTCTCTGTTCAGCCAAGGAGGGCAGAGAAA...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTGCATTTTCCTTTGTTTaGCAGTTTCCCCTGACTTTT +
Preference number: 4 (lower is better)
Translates to: TDLGEKHSTICERLYVNSAFSFV*QFPLTF
Trigger: AAAAGTCAGGGGAAACTGCCAAACAAAGGAAAATGC...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGCAATGGGAGGACCTTTGTAAATCTGACAGTAAAAGTGAAGAAGGAGTTTACGACAAACAACAGATTTaGGGGAAAAACACTCCACCA +
Preference number: 4 (lower is better)
Translates to: LQWEDLCKSDSKSEEGVYDKQQI*GKNTPP
Trigger: TGGTGGAGTGTTTTTCCCCCAAATCTGTTGTTTGTC...GTAAACTCCTTCTTCACTTTTACTGTCAGATTTACAAAGGTCCTCCCATTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGGTGTCTTTCCTGTACTaGATCTCAAATGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTVSFLY*ISNVWS
Trigger: AGACCACACATTTGAGATCCAGTACAGGAAAGACAC...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCGTGTCTTTCCTGTACTaGATCTCAAATGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGVSFLY*ISNVWS
Trigger: AGACCACACATTTGAGATCCAGTACAGGAAAGACAC...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGAAAGCATATATGCCTTTaGGGCATTTTCCTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRKHICL*GIFLCL
Trigger: CAAACAAAGGAAAATGCCCCAAAGGCATATATGCTT...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGAAACACTGCTTTGCAATaGGAGGACCTTTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRNTALQ*EDLCKS
Trigger: AGATTTACAAAGGTCCTCCCATTGCAAAGCAGTGTT...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
3UTR CAA 72 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTaGTTCATTATGAACAGAGGATTCTACTTTACAATG +
Preference number: 4 (lower is better)
Translates to: YLGLLSNPHWFI*FIMNRGFYFTM
Trigger: CATTGTAAAGTAGAATCCTCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CCA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCAACACTTCAGGTACATaGAAAAAGAATTTCAGTACC +
Preference number: 4 (lower is better)
Translates to: KHSTICERLYVNSQKDLINTSGT*KKNFST
Trigger: GGTACTGAAATTCTTTTTCCATGTACCTGAAGTGTT...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS TCA 90 bp GGGCCAGGCGGGTCCGTACTCGGGCCACGTAGGTGCTGCTGGGCATaGGGTGCTCTGGCCCCAGGGTGGCCTGGGAGGTGTTGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: GPGGSVLGPRRCCWA*GALAPGWPGRCWRG
Trigger: TCCTCTCCAACACCTCCCAGGCCACCCTGGGGCCAGAGCACCTCATGCCCAGCAGCACCTACGTGGCCCGAGTACGGACCCGCCTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS CCA 90 bp ATGTATTGGCCGTGGGTCGCGGGGTCGGGCACGGGAATCTGGCAGTaGTGCCTGGTGTGGAGGCTGCCGAGCCCCTCCCTCAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: MYWPWVAGSGTGIWQ*CLVWRLPSPSLSTG
Trigger: CCCAGTGCTGAGGGAGGGGCTCGGCAGCCTCCACACCAGGCACCACTGCCAGATTCCCGTGCCCGACCCCGCGACCCACGGCCAATACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 90 bp GAGACGATGTATTGGCCGTGGGTCGCGGGGTCGGGCACGGGAATCTaGCAGTGGTGCCTGGTGTGGAGGCTGCCGAGCCCCTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ETMYWPWVAGSGTGI*QWCLVWRLPSPSLS
Trigger: GCTGAGGGAGGGGCTCGGCAGCCTCCACACCAGGCACCACTGCCAGATTCCCGTGCCCGACCCCGCGACCCACGGCCAATACATCGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGCGGGCTGTGGGGATGTaGGGGACACATCTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: QAGGKASPLHPLACLGLGRAVGM*GTHLPG
Trigger: GCCCGGCAGATGTGTCCCCAACATCCCCACAGCCCG...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS TCA 90 bp CTGGGAGTCCCAGCAAACCTCTGGGCTCCACTTGCTGGGACGTCCTaGGAGCCGAGAACCTGGGGCCAGGCGGGTCCGTACTCGGGCCAC +
Preference number: 5 (lower is better)
Translates to: LGVPANLWAPLAGTS*EPRTWGQAGPYSGH
Trigger: GTGGCCCGAGTACGGACCCGCCTGGCCCCAGGTTCTCGGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGGTTTGCTGGGACTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS GCA 90 bp CCTCATCCCCTGGCTGGGAGTCCCAGCAAACCTCTGGGCTCCACTTaGTGGGACGTCCTGAGAGCCGAGAACCTGGGGCCAGGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: PHPLAGSPSKPLGST*WDVLRAENLGPGGS
Trigger: GGACCCGCCTGGCCCCAGGTTCTCGGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGGTTTGCTGGGACTCCCAGCCAGGGGATGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS GCA 90 bp GCCTGTCCTGGTCCCATCGCCTGGGCCAGAGGGACCAGTTGCACCTaGCCCCCAGCAGGCAGACACAGGTACTCCAGGGACCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: ACPGPIAWARGTSCT*PPAGRHRYSRDPGG
Trigger: ACCTCCAGGGTCCCTGGAGTACCTGTGTCTGCCTGCTGGGGGGCAGGTGCAACTGGTCCCTCTGGCCCAGGCGATGGGACCAGGACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 90 bp GCAGGCAGACACAGGTACTCCAGGGACCCTGGAGGTGGGGACTTCTaGCTCCCACCCTCCTGTGGGGGCTCCGGCTGGCCCAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: AGRHRYSRDPGGGDF*LPPSCGGSGWPRMS
Trigger: TGACATCCTGGGCCAGCCGGAGCCCCCACAGGAGGGTGGGAGCCAGAAGTCCCCACCTCCAGGGTCCCTGGAGTACCTGTGTCTGCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS TCA 90 bp GGACCGGCCCTCAATTGGAGGGAGCTCCACATAGCCCTCAAACCCTaGCTTCACAGGGCCTGGGGCTCCAGGGGGTCCACTGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GPALNWRELHIALKP*LHRAWGSRGSTGQP
Trigger: GGGCTGGCCAGTGGACCCCCTGGAGCCCCAGGCCCTGTGAAGTCAGGGTTTGAGGGCTATGTGGAGCTCCCTCCAATTGAGGGCCGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 90 bp CATCCCCTGGCTGGGAGTCCCAGCAAACCTCTGGGCTCCACTTGCTaGGACGTCCTGAGAGCCGAGAACCTGGGGCCAGGCGGGTCCGTA +
Preference number: 5 (lower is better)
Translates to: HPLAGSPSKPLGSTC*DVLRAENLGPGGSV
Trigger: TACGGACCCGCCTGGCCCCAGGTTCTCGGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGGTTTGCTGGGACTCCCAGCCAGGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS CCA 90 bp GCAGTGGTGCCTGGTGTGGAGGCTGCCGAGCCCCTCCCTCAGCACTaGGGAGCACTCTTCCTCCCTGAGGAGCACAGCAGAGCCTGCATC +
Preference number: 5 (lower is better)
Translates to: AVVPGVEAAEPLPQH*GALFLPEEHSRACI
Trigger: GATGCAGGCTCTGCTGTGCTCCTCAGGGAGGAAGAGTGCTCCCCAGTGCTGAGGGAGGGGCTCGGCAGCCTCCACACCAGGCACCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406230.5
CDS-3UTR CAA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGTGGAGGGTCTCGGTCTaGCTGTCCTTCCACGTGGCC +
Preference number: 5 (lower is better)
Translates to: QAGGKASPLHPLACLGLGWRVSV*LSFHVA
Trigger: GGCCACGTGGAAGGACAGCAAGACCGAGACCCTCCA...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGGACCGGCCCTCAATaGGAGGGAGCTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGTGPQ*EGAPHS
Trigger: GCTATGTGGAGCTCCCTCCAATTGAGGGCCGGTCCC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGGACAGGATTGTTCCTaGGTGACCTGGGGGACCGGC +
Preference number: 5 (lower is better)
Translates to: QAGGKASPLHPLACLGLGGQDCS*VTWGTG
Trigger: GCCGGTCCCCCAGGTCACCAAGGAACAATCCTGTCC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCGGGCTGTGGGGATGTaGGGGACACATCTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPRAVGM*GTHLPG
Trigger: GCCCGGCAGATGTGTCCCCAACATCCCCACAGCCCG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS CCA 90 bp TGGCTCTGGGGACTCCCAAGGGCCACACTCCAGGTCAGCAGGAAGTaGTCCTGGTCGGTGCTGATCTGCAGGTCCCTGGGCTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: WLWGLPRATLQVSRK*SWSVLICRSLGSGG
Trigger: GCCTCCTGAGCCCAGGGACCTGCAGATCAGCACCGACCAGGACCACTTCCTGCTGACCTGGAGTGTGGCCCTTGGGAGTCCCCAGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS-3UTR CAA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGACCTCTGGGCTCCACTaGCTGGGACGTCCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: GQAGGKASPLHPLACLGLTSGLH*LGRPES
Trigger: GCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGGT...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGAACAGAGACGATGTATaGGCCGTGGGTCGCGGGGTC +
Preference number: 5 (lower is better)
Translates to: QAGGKASPLHPLACLGLGNRDDV*AVGRGV
Trigger: GACCCCGCGACCCACGGCCAATACATCGTCTCTGTT...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGACCGGCCCTCAATaGGAGGGAGCTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: GQAGGKASPLHPLACLGLGTGPQ*EGAPHS
Trigger: GCTATGTGGAGCTCCCTCCAATTGAGGGCCGGTCCC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTCGGGCTGTGGGGATGTaGGGGACACATCTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTRAVGM*GTHLPG
Trigger: GCCCGGCAGATGTGTCCCCAACATCCCCACAGCCCG...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGCAATAGTCGCCCACTaGCTGCAGGACAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QAGGKASPLHPLACLGLGAIVAH*LQDKEA
Trigger: GGCCTCCTTGTCCTGCAGCAAGTGGGCGACTATTGC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGACCTCCCCAGGCTTGTaGACCTCCCAAGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: GQAGGKASPLHPLACLGLTSPGL*TSQGGR
Trigger: TCTGCCCCCTTGGGAGGTCAACAAGCCTGGGGAGGT...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS CCA 90 bp TGGGGACTCCCAAGGGCCACACTCCAGGTCAGCAGGAAGTGGTCCTaGTCGGTGCTGATCTGCAGGTCCCTGGGCTCAGGAGGCTGGACA +
Preference number: 5 (lower is better)
Translates to: WGLPRATLQVSRKWS*SVLICRSLGSGGWT
Trigger: TGTCCAGCCTCCTGAGCCCAGGGACCTGCAGATCAGCACCGACCAGGACCACTTCCTGCTGACCTGGAGTGTGGCCCTTGGGAGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS-3UTR CAA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGCCATCCTTGGTCACGTaGAGGGATGGAGGGGCCATC +
Preference number: 5 (lower is better)
Translates to: GQAGGKASPLHPLACLGLPSLVT*RDGGAI
Trigger: GATGGCCCCTCCATCCCTCAACGTGACCAAGGATGG...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGCCTGGTCTAGGTTCTaGATCTCAGGACCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: GQAGGKASPLHPLACLGLAWSRF*ISGPGP
Trigger: GGGACCCGGTCCTGAGATCAAGAACCTAGACCAGGC...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS TCA 90 bp GAGCATCCCAGTGCGGGCTTCAGGCACAAGGAGGGTGCTAGCGGCTaGAGCAGGGAGAGAACCCCAGCCAAGGCCCTGCAGGAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: EHPSAGFRHKEGASG*SRERTPAKALQEQS
Trigger: ACTTTGCTCCTGCAGGGCCTTGGCTGGGGTTCTCTCCCTGCTTCAGCCGCTAGCACCCTCCTTGTGCCTGAAGCCCGCACTGGGATGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421539.1
CDS-3UTR CAA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTTGGCTCTTGCTGGGGTaGGGGATCTTCTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPWLLLG*GIFSSH
Trigger: GTGGGAGGAGAAGATCCCCAACCCCAGCAAGAGCCA...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp GGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGTGGAACAGGTGGCTCTaGCTGGGGTTGGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: GQAGGKASPLHPLACLGLWNRWL*LGLGIF
Trigger: GAAGATCCCCAACCCCAGCAAGAGCCACCTGTTCCA...CAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTAACAGAGACGATGTATaGGCCGTGGGTCGCGGGGTC +
Preference number: 5 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTNRDDV*AVGRGV
Trigger: GACCCCGCGACCCACGGCCAATACATCGTCTCTGTT...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp CAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTTTCTCTGCCCTCCTaGGCTGAACAGAGACGATGT +
Preference number: 5 (lower is better)
Translates to: QAGGKASPLHPLACLGLGVSLPS*AEQRRC
Trigger: ACATCGTCTCTGTTCAGCCAAGGAGGGCAGAGAAAC...CCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp GGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTGGGGGTGGATCACAGACATGCTaGGGGTCCTCTATGGTGAGA +
Preference number: 5 (lower is better)
Translates to: GGREGKPSPSPCLSRPGGGSQTC*GSSMVR
Trigger: TCTCACCATAGAGGACCCCAAGCATGTCTGTGATCC...ACCCCCAGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp AGGTCAGGCGGGAGGGAAGGCAAGCCCTCTCCATCCCCTTGCCTGTCTAGGCCTCGGTGGGAGGGAGAGTaGCCTGGTCTATCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RSGGREGKPSPSPCLSRPRWEGE*PGLSGR
Trigger: TCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCG...AGGCCTAGACAGGCAAGGGGATGGAGAGGGCTTGCCTTCCCTCCCGCCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CAA 90 bp GACTGCCGGGGACAGGCAGCCCACACAAGTCCTCAACACAACCAGCCGCATCTCAGGCCTCTAGCTACCTaGACAGGAGGCTGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: DCRGQAAHTSPQHNQPHLRPLAT*TGGCPL
Trigger: CAAGGGGCAGCCTCCTGTCAAGGTAGCTAGAGGCCT...GAGATGCGGCTGGTTGTGTTGAGGACTTGTGTGGGCTGCCTGTCCCCGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS GCA 90 bp GAGGCAGCTGGAGTCGTGTCAGGCCCAGATGGTGGATCACAGACATaGTTGGGGTCCTCTATGGTGAGAGGTGACACCTCGCTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: EAAGVVSGPDGGSQT*LGSSMVRGDTSLSP
Trigger: CGGGGACAGCGAGGTGTCACCTCTCACCATAGAGGACCCCAAGCATGTCTGTGATCCACCATCTGGGCCTGACACGACTCCAGCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGCCATTTCACAGGCTCTaGGGACCTCTCCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SPSSVAGGRESCLVYLEEPFHRL*GPLPPG
Trigger: GCCAGGAGGGAGAGGTCCCAAGAGCCTGTGAAATGG...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTACCATCCTTGGTCACGTaGAGGGATGGAGGGGCCATC +
Preference number: 5 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLPSLVT*RDGGAI
Trigger: GATGGCCCCTCCATCCCTCAACGTGACCAAGGATGG...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGTGGCTCTTGCTGGGGTaGGGGATCTTCTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: PLICGRWEGELPGLSGRVWLLLG*GIFSSH
Trigger: GTGGGAGGAGAAGATCCCCAACCCCAGCAAGAGCCA...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTGGAACAGGTGGCTCTaGCTGGGGTTGGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTWNRWL*LGLGIF
Trigger: GAAGATCCCCAACCCCAGCAAGAGCCACCTGTTCCA...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS CCA 90 bp AGAGTCCTGAAGCCGCTTGTAGACCACCTCAAACTCCAGATCCCCTaGGGACAACCAGTGGCTCTGGGGACTCCCAAGGGCCACACTCCA +
Preference number: 5 (lower is better)
Translates to: RVLKPLVDHLKLQIP*GQPVALGTPKGHTP
Trigger: TGGAGTGTGGCCCTTGGGAGTCCCCAGAGCCACTGGTTGTCCCCAGGGGATCTGGAGTTTGAGGTGGTCTACAAGCGGCTTCAGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS-3UTR CAA 90 bp AGCCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGCGGTGGGAGGGAGAGTaGCCTGGTCTATCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: SPSSVAGGRESCLVYLEERWEGE*PGLSGR
Trigger: TCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCG...CTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS TCA 90 bp CCAGAGAGGGAACTAGGGAGACAGACGAGGCCCCTGAGTTTGGGGTaGATACCAGGTCTGCAGAGGAGACATAACCAGAGGCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: PERELGRQTRPLSLG*IPGLQRRHNQRPLQ
Trigger: CTGGAGTGGCCTCTGGTTATGTCTCCTCTGCAGACCTGGTATTCACCCCAAACTCAGGGGCCTCGTCTGTCTCCCTAGTTCCCTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp CCCCTCATCTGTGGCCGGTGGGAGGGAGAGTTGCCTGGTCTATCTGGAAGAGTGGGATCACAGACATGCTaGGGGTCCTCTATGGTGAGA +
Preference number: 5 (lower is better)
Translates to: PLICGRWEGELPGLSGRVGSQTC*GSSMVR
Trigger: TCTCACCATAGAGGACCCCAAGCATGTCTGTGATCC...CACTCTTCCAGATAGACCAGGCAACTCTCCCTCCCACCGGCCACAGATGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp TGCCCATTTCTCGGAGTGACAATCGAGGCTAGTCTGAATTCCCTGAGCCTCACTGCCTGGTCTAGGTTCTaGATCTCAGGACCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: CPFLGVTIEASLNSLSLTAWSRF*ISGPGP
Trigger: GGGACCCGGTCCTGAGATCAAGAACCTAGACCAGGC...AGTGAGGCTCAGGGAATTCAGACTAGCCTCGATTGTCACTCCGAGAAATGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS TCA 90 bp TTGTTTCCCAGCGCAGGCTGTAGCTGTCTCCATCCTTGGTCACGTTaGGGGATGGAGGGGCCATCTGGATGTTCACTGAGCTCTTTATGT +
Preference number: 5 (lower is better)
Translates to: LFPSAGCSCLHPWSR*GMEGPSGCSLSSLC
Trigger: ACATAAAGAGCTCAGTGAACATCCAGATGGCCCCTCCATCCCTCAACGTGACCAAGGATGGAGACAGCTACAGCCTGCGCTGGGAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp TCTCCTGATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTCCACATTGGTTCATCTaGTTCATTATGAACAGAGGA +
Preference number: 5 (lower is better)
Translates to: SPDVPQVPPACPPLGPLTPHWFI*FIMNRG
Trigger: TCCTCTGTTCATAATGAACAAGATGAACCAATGTGG...AGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCGGACAGGATTGTTCCTaGGTGACCTGGGGGACCGGC +
Preference number: 5 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSGQDCS*VTWGTG
Trigger: GCCGGTCCCCCAGGTCACCAAGGAACAATCCTGTCC...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp GATGTTCCCCAGGTCCCGCCAGCCTGCCCACCACTTGGGCCGTTAACTTCTCTATTACTAGGGATCTGTTaGACATTACAGAAGCATTCA +
Preference number: 5 (lower is better)
Translates to: DVPQVPPACPPLGPLTSLLLGIC*TLQKHS
Trigger: TGAATGCTTCTGTAATGTCAAACAGATCCCTAGTAA...TAGAGAAGTTAACGGCCCAAGTGGTGGGCAGGCTGGCGGGACCTGGGGAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTTGGAGGGTCTCGGTCTaGCTGTCCTTCCACGTGGCC +
Preference number: 5 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFWRVSV*LSFHVA
Trigger: GGCCACGTGGAAGGACAGCAAGACCGAGACCCTCCA...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACGCAATAGTCGCCCACTaGCTGCAGGACAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHAIVAH*LQDKEA
Trigger: GGCCTCCTTGTCCTGCAGCAAGTGGGCGACTATTGC...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACGCCTGGTCTAGGTTCTaGATCTCAGGACCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHAWSRF*ISGPGP
Trigger: GGGACCCGGTCCTGAGATCAAGAACCTAGACCAGGC...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp GAGCAAGGCTATCTCCTTTCCCAGGCCTCTAGCTACCTTGACAGGAGGCTGCCCTTACTAGGGATCTGTTaGACATTACAGAAGCATTCA +
Preference number: 5 (lower is better)
Translates to: EQGYLLSQASSYLDRRLPLLGIC*TLQKHS
Trigger: TGAATGCTTCTGTAATGTCAAACAGATCCCTAGTAA...GGGCAGCCTCCTGTCAAGGTAGCTAGAGGCCTGGGAAAGGAGATAGCCTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS CCA 90 bp TCCTTCCACGTGGCCGTGTCTTTCCTGTACTGGATCTCAAATGTGTaGTCTATGTGTTCGTATCGCATTTTCATTGTTTCCCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SFHVAVSFLYWISNV*SMCSYRIFIVSQRR
Trigger: CCTGCGCTGGGAAACAATGAAAATGCGATACGAACACATAGACCACACATTTGAGATCCAGTACAGGAAAGACACGGCCACGTGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCCATCCTTGGTCACGTaGAGGGATGGAGGGGCCATC +
Preference number: 5 (lower is better)
Translates to: TDLGEKHSTICERLYVNSPSLVT*RDGGAI
Trigger: GATGGCCCCTCCATCCCTCAACGTGACCAAGGATGG...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp GTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCACACTGGAACAGGTGGCTCTaGCTGGGGTTGGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: VHGKRISVPKGTSVSHPHWNRWL*LGLGIF
Trigger: GAAGATCCCCAACCCCAGCAAGAGCCACCTGTTCCA...GTGTGGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTGCAATAGTCGCCCACTaGCTGCAGGACAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: TDLGEKHSTICERLYVNSAIVAH*LQDKEA
Trigger: GGCCTCCTTGTCCTGCAGCAAGTGGGCGACTATTGC...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS CCA 90 bp GTCTCGGTCTTGCTGTCCTTCCACGTGGCCGTGTCTTTCCTGTACTaGATCTCAAATGTGTGGTCTATGTGTTCGTATCGCATTTTCATT +
Preference number: 5 (lower is better)
Translates to: VSVLLSFHVAVSFLY*ISNVWSMCSYRIFI
Trigger: AATGAAAATGCGATACGAACACATAGACCACACATTTGAGATCCAGTACAGGAAAGACACGGCCACGTGGAAGGACAGCAAGACCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS-3UTR CAA 90 bp AAAAGACTTAATCAGAAAATGATAGCACCCAACAGAAGAAAGACCTTAATGGGCACCTCTGGGCTCCACTaGCTGGGACGTCCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: KRLNQKMIAPNRRKTLMGTSGLH*LGRPES
Trigger: GCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGGT...GCCCATTAAGGTCTTTCTTCTGTTGGGTGCTATCATTTTCTGATTAAGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGAGGGACCGGCCCTCAATaGGAGGGAGCTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRGTGPQ*EGAPHS
Trigger: GCTATGTGGAGCTCCCTCCAATTGAGGGCCGGTCCC...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp TTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGAGAACCTCCCCAGGCTTGTaGACCTCCCAAGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: LTTNIAVMNRDLRAKVTRTSPGL*TSQGGR
Trigger: TCTGCCCCCTTGGGAGGTCAACAAGCCTGGGGAGGT...TCTCGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403662.8
CDS-3UTR CAA 90 bp TCTTTGACCACCAACATTGCTGTAATGAATAGGGATTTAAGAGCAAAAGTAACGCCATTTCACAGGCTCTaGGGACCTCTCCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SLTTNIAVMNRDLRAKVTPFHRL*GPLPPG
Trigger: GCCAGGAGGGAGAGGTCCCAAGAGCCTGTGAAATGG...CGTTACTTTTGCTCTTAAATCCCTATTCATTACAGCAATGTTGGTGGTCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGAACCTCTGGGCTCCACTaGCTGGGACGTCCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRTSGLH*LGRPES
Trigger: GCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGGT...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCGGACAGGATTGTTCCTaGGTGACCTGGGGGACCGGC +
Preference number: 5 (lower is better)
Translates to: KHSTICERLYVNSQKDLIGQDCS*VTWGTG
Trigger: GCCGGTCCCCCAGGTCACCAAGGAACAATCCTGTCC...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp ATTTGGACCAAAGGCCCTAAAGCATATATGCCTTTGGGGCATTTTCCTTTGTTTGGATCACAGACATGCTaGGGGTCCTCTATGGTGAGA +
Preference number: 5 (lower is better)
Translates to: IWTKGPKAYMPLGHFPLFGSQTC*GSSMVR
Trigger: TCTCACCATAGAGGACCCCAAGCATGTCTGTGATCC...AAACAAAGGAAAATGCCCCAAAGGCATATATGCTTTAGGGCCTTTGGTCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp ACAGATTTGGGGGAAAAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTAGGACAAACACTGCTTaGCAATGGGAGGACCTTTGT +
Preference number: 5 (lower is better)
Translates to: TDLGEKHSTICERLYVNSRTNTA*QWEDLC
Trigger: ACAAAGGTCCTCCCATTGCAAAGCAGTGTTTGTCCT...ACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTTTTCCCCCAAATCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp TATCTCGGACTTCTTTCTAATCCACATTGGTTCATCTTGTTCATTATGAACAGAGTTTCTCTGCCCTCCTaGGCTGAACAGAGACGATGT +
Preference number: 5 (lower is better)
Translates to: YLGLLSNPHWFILFIMNRVSLPS*AEQRRC
Trigger: ACATCGTCTCTGTTCAGCCAAGGAGGGCAGAGAAAC...TCTGTTCATAATGAACAAGATGAACCAATGTGGATTAGAAAGAAGTCCGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCGTTTCTCTGCCCTCCTaGGCTGAACAGAGACGATGT +
Preference number: 5 (lower is better)
Translates to: KHSTICERLYVNSQKDLIVSLPS*AEQRRC
Trigger: ACATCGTCTCTGTTCAGCCAAGGAGGGCAGAGAAAC...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp TCAGGTACATGGAAAAAGAATTTCAGTACCAAAAGGCACCTCAGTCTCACATCCCCACATTGGTTCATCTaGTTCATTATGAACAGAGGA +
Preference number: 5 (lower is better)
Translates to: SGTWKKNFSTKRHLSLTSPHWFI*FIMNRG
Trigger: TCCTCTGTTCATAATGAACAAGATGAACCAATGTGG...GGATGTGAGACTGAGGTGCCTTTTGGTACTGAAATTCTTTTTCCATGTACCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS-3UTR CAA 90 bp AAACACTCCACCATCTGTGAAAGACTGTATGTCAATAGTCAAAAAGACTTAATCAGGACAAACACTGCTTaGCAATGGGAGGACCTTTGT +
Preference number: 5 (lower is better)
Translates to: KHSTICERLYVNSQKDLIRTNTA*QWEDLC
Trigger: ACAAAGGTCCTCCCATTGCAAAGCAGTGTTTGTCCT...GATTAAGTCTTTTTGACTATTGACATACAGTCTTTCACAGATGGTGGAGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262825.9
ENST00000403662.8
CDS CCA 72 bp CCGTGGGTCGCGGGGTCGGGCACGGGAATCTGGCAGTaGTGCCTGGTGTGGAGGCTGCCGAGCCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PWVAGSGTGIWQ*CLVWRLPSPSL
Trigger: GAGGGAGGGGCTCGGCAGCCTCCACACCAGGCACCACTGCCAGATTCCCGTGCCCGACCCCGCGACCCACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 72 bp TCGCGGGGTCGGGCACGGGAATCTGGCAGTGGTGCCTaGTGTGGAGGCTGCCGAGCCCCTCCCTCAGCACTG +
Preference number: 6 (lower is better)
Translates to: SRGRARESGSGA*CGGCRAPPSAL
Trigger: CAGTGCTGAGGGAGGGGCTCGGCAGCCTCCACACCAGGCACCACTGCCAGATTCCCGTGCCCGACCCCGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 72 bp TATTGGCCGTGGGTCGCGGGGTCGGGCACGGGAATCTaGCAGTGGTGCCTGGTGTGGAGGCTGCCGAGCCCC +
Preference number: 6 (lower is better)
Translates to: YWPWVAGSGTGI*QWCLVWRLPSP
Trigger: GGGGCTCGGCAGCCTCCACACCAGGCACCACTGCCAGATTCCCGTGCCCGACCCCGCGACCCACGGCCAATA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 72 bp GACTTCTGGCTCCCACCCTCCTGTGGGGGCTCCGGCTaGCCCAGGATGTCAGGTAGGGAGCGGCTGTGGGGC +
Preference number: 6 (lower is better)
Translates to: DFWLPPSCGGSG*PRMSGRERLWG
Trigger: GCCCCACAGCCGCTCCCTACCTGACATCCTGGGCCAGCCGGAGCCCCCACAGGAGGGTGGGAGCCAGAAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CAA 90 bp GCCTCATCCCCTGGCTGGGAGTCCCAGCAAACCTCTGGGCTCCACTaGCTGGGACGTCCTGAGAGCCGAGAACCTGGGGCCAGGCGGGTC +
Preference number: 6 (lower is better)
Translates to: ASSPGWESQQTSGLH*LGRPESREPGARRV
Trigger: GACCCGCCTGGCCCCAGGTTCTCGGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGGTTTGCTGGGACTCCCAGCCAGGGGATGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS GCA 72 bp GGTCCCATCGCCTGGGCCAGAGGGACCAGTTGCACCTaGCCCCCAGCAGGCAGACACAGGTACTCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: GPIAWARGTSCT*PPAGRHRYSRD
Trigger: GTCCCTGGAGTACCTGTGTCTGCCTGCTGGGGGGCAGGTGCAACTGGTCCCTCTGGCCCAGGCGATGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS TCA 72 bp CCAGCAAACCTCTGGGCTCCACTTGCTGGGACGTCCTaGGAGCCGAGAACCTGGGGCCAGGCGGGTCCGTAC +
Preference number: 6 (lower is better)
Translates to: PANLWAPLAGTS*EPRTWGQAGPY
Trigger: GTACGGACCCGCCTGGCCCCAGGTTCTCGGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGGTTTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS CCA 72 bp GCTGGGAGTCCCAGCAAACCTCTGGGCTCCACTTGCTaGGACGTCCTGAGAGCCGAGAACCTGGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: AGSPSKPLGSTC*DVLRAENLGPG
Trigger: GCCTGGCCCCAGGTTCTCGGCTCTCAGGACGTCCCAGCAAGTGGAGCCCAGAGGTTTGCTGGGACTCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS TCA 72 bp AGTGCGGGCTTCAGGCACAAGGAGGGTGCTAGCGGCTaGAGCAGGGAGAGAACCCCAGCCAAGGCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: SAGFRHKEGASG*SRERTPAKALQ
Trigger: CTGCAGGGCCTTGGCTGGGGTTCTCTCCCTGCTTCAGCCGCTAGCACCCTCCTTGTGCCTGAAGCCCGCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421539.1
CDS CCA 72 bp TGGGGGACTCCCGCTAGTGAAGGCCGACATGCTGCCTaGGGGCCAAAGCTCTGCGCTCCCGTTCTGGAACAG +
Preference number: 6 (lower is better)
Translates to: WGTPASEGRHAA*GPKLCAPVLEQ
Trigger: CTGTTCCAGAACGGGAGCGCAGAGCTTTGGCCCCCAGGCAGCATGTCGGCCTTCACTAGCGGGAGTCCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS GCA 72 bp AGTGAAGGCCGACATGCTGCCTGGGGGCCAAAGCTCTaGGCTCCCGTTCTGGAACAGGTGGCTCTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: SEGRHAAWGPKL*APVLEQVALAG
Trigger: CCCAGCAAGAGCCACCTGTTCCAGAACGGGAGCGCAGAGCTTTGGCCCCCAGGCAGCATGTCGGCCTTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 72 bp CCAAGGGCCACACTCCAGGTCAGCAGGAAGTGGTCCTaGTCGGTGCTGATCTGCAGGTCCCTGGGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: PRATLQVSRKWS*SVLICRSLGSG
Trigger: TCCTGAGCCCAGGGACCTGCAGATCAGCACCGACCAGGACCACTTCCTGCTGACCTGGAGTGTGGCCCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS CAA 90 bp GGGGGACAGGATTGTTCCTTGGTGACCTGGGGGACCGGCCCTCAATaGGAGGGAGCTCCACATAGCCCTCAAACCCTGACTTCACAGGGC +
Preference number: 6 (lower is better)
Translates to: GGQDCSLVTWGTGPQ*EGAPHSPQTLTSQG
Trigger: GCCCTGTGAAGTCAGGGTTTGAGGGCTATGTGGAGCTCCCTCCAATTGAGGGCCGGTCCCCCAGGTCACCAAGGAACAATCCTGTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 72 bp AAGCCGCTTGTAGACCACCTCAAACTCCAGATCCCCTaGGGACAACCAGTGGCTCTGGGGACTCCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: KPLVDHLKLQIP*GQPVALGTPKG
Trigger: GCCCTTGGGAGTCCCCAGAGCCACTGGTTGTCCCCAGGGGATCTGGAGTTTGAGGTGGTCTACAAGCGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
ENST00000421539.1
CDS CCA 72 bp CGCTCCCGTTCTGGAACAGGTGGCTCTTGCTGGGGTTaGGGATCTTCTCCTCCCACTTTCTGCGCAGCCTGT +
Preference number: 6 (lower is better)
Translates to: RSRSGTGGSCWG*GSSPPTFCAAC
Trigger: ACAGGCTGCGCAGAAAGTGGGAGGAGAAGATCCCCAACCCCAGCAAGAGCCACCTGTTCCAGAACGGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 72 bp GCTCTGCGCTCCCGTTCTGGAACAGGTGGCTCTTGCTaGGGTTGGGGATCTTCTCCTCCCACTTTCTGCGCA +
Preference number: 6 (lower is better)
Translates to: ALRSRSGTGGSC*GWGSSPPTFCA
Trigger: TGCGCAGAAAGTGGGAGGAGAAGATCCCCAACCCCAGCAAGAGCCACCTGTTCCAGAACGGGAGCGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CAA 72 bp TTTCTCTGCCCTCCTTGGCTGAACAGAGACGATGTATaGGCCGTGGGTCGCGGGGTCGGGCACGGGAATCTG +
Preference number: 6 (lower is better)
Translates to: FLCPPWLNRDDV*AVGRGVGHGNL
Trigger: CAGATTCCCGTGCCCGACCCCGCGACCCACGGCCAATACATCGTCTCTGTTCAGCCAAGGAGGGCAGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CAA 90 bp CTTTATGTGTTTCTCTGCCCTCCTTGGCTGAACAGAGACGATGTATaGGCCGTGGGTCGCGGGGTCGGGCACGGGAATCTGGCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: LYVFLCPPWLNRDDV*AVGRGVGHGNLAVV
Trigger: CACCACTGCCAGATTCCCGTGCCCGACCCCGCGACCCACGGCCAATACATCGTCTCTGTTCAGCCAAGGAGGGCAGAGAAACACATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CAA 90 bp GCAGCTGGAGTCGTGTCAGGCCCAGATGGTGGATCACAGACATGCTaGGGGTCCTCTATGGTGAGAGGTGACACCTCGCTGTCCCCGAAT +
Preference number: 6 (lower is better)
Translates to: AAGVVSGPDGGSQTC*GSSMVRGDTSLSPN
Trigger: ATTCGGGGACAGCGAGGTGTCACCTCTCACCATAGAGGACCCCAAGCATGTCTGTGATCCACCATCTGGGCCTGACACGACTCCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS TCA 72 bp ACCTGGGGCACAGCCTGGCCTGGGGGCTTCTTGACTTaGAAAGCCTGGTCTAGGTTCTTGATCTCAGGACCG +
Preference number: 6 (lower is better)
Translates to: TWGTAWPGGFLT*KAWSRFLISGP
Trigger: CGGTCCTGAGATCAAGAACCTAGACCAGGCTTTTCAAGTCAAGAAGCCCCCAGGCCAGGCTGTGCCCCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS TCA 72 bp ACAGACATCACTGAGACAACTAGGGCTTTGAAGAGCTaGATGACGGGCACCTGGGGCACAGCCTGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: TDITETTRALKS*MTGTWGTAWPG
Trigger: CCCAGGCCAGGCTGTGCCCCAGGTGCCCGTCATTCAGCTCTTCAAAGCCCTAGTTGTCTCAGTGATGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262825.9
CDS GCA 72 bp GGAGTCGTGTCAGGCCCAGATGGTGGATCACAGACATaGTTGGGGTCCTCTATGGTGAGAGGTGACACCTCG +
Preference number: 6 (lower is better)
Translates to: GVVSGPDGGSQT*LGSSMVRGDTS
Trigger: CGAGGTGTCACCTCTCACCATAGAGGACCCCAAGCATGTCTGTGATCCACCATCTGGGCCTGACACGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CAA 72 bp GTCGTGTCAGGCCCAGATGGTGGATCACAGACATGCTaGGGGTCCTCTATGGTGAGAGGTGACACCTCGCTG +
Preference number: 6 (lower is better)
Translates to: VVSGPDGGSQTC*GSSMVRGDTSL
Trigger: CAGCGAGGTGTCACCTCTCACCATAGAGGACCCCAAGCATGTCTGTGATCCACCATCTGGGCCTGACACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CAA 72 bp GATTGTTCCTTGGTGACCTGGGGGACCGGCCCTCAATaGGAGGGAGCTCCACATAGCCCTCAAACCCTGACT +
Preference number: 6 (lower is better)
Translates to: DCSLVTWGTGPQ*EGAPHSPQTLT
Trigger: AGTCAGGGTTTGAGGGCTATGTGGAGCTCCCTCCAATTGAGGGCCGGTCCCCCAGGTCACCAAGGAACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CCA 72 bp TTGCTGTCCTTCCACGTGGCCGTGTCTTTCCTGTACTaGATCTCAAATGTGTGGTCTATGTGTTCGTATCGC +
Preference number: 6 (lower is better)
Translates to: LLSFHVAVSFLY*ISNVWSMCSYR
Trigger: GCGATACGAACACATAGACCACACATTTGAGATCCAGTACAGGAAAGACACGGCCACGTGGAAGGACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5
CDS CAA 90 bp ACTGGATCTCAAATGTGTGGTCTATGTGTTCGTATCGCATTTTCATaGTTTCCCAGCGCAGGCTGTAGCTGTCTCCATCCTTGGTCACGT +
Preference number: 6 (lower is better)
Translates to: TGSQMCGLCVRIAFS*FPSAGCSCLHPWSR
Trigger: ACGTGACCAAGGATGGAGACAGCTACAGCCTGCGCTGGGAAACAATGAAAATGCGATACGAACACATAGACCACACATTTGAGATCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262825.9
ENST00000403662.8
ENST00000406230.5