Pregenerated sensors for CSF2RA (Homo sapiens)
Ensembl gene IDs: ENSG00000198223Ensembl transcript IDs: ENST00000355432.8, ENST00000355805.7, ENST00000381509.8, ENST00000381524.8, ENST00000381529.9, ENST00000417535.7, ENST00000432318.8, ENST00000486791.6, ENST00000501036.7
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCAGCCTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATGTGAGCCACCGCGCCTaGCCCCAAATGTCATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SASQVAGMMGVRRRAWVNVSHRA*PQMSCF Trigger: AAAACATGACATTTGGGGCCAGGCGCGGTGGCTCAC...ATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCGTGAGCCACCGCGCCTaGCCCCAAATGTCATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SQVAGMMGVRRRAWVNFCVSHRA*PQMSCF Trigger: AAAACATGACATTTGGGGCCAGGCGCGGTGGCTCAC...GCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATGTGAGCCACCGCGCCTaGCCCCAAATGTCATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PSSWDDGRPPPCLGKFLHVSHRA*PQMSCF Trigger: AAAACATGACATTTGGGGCCAGGCGCGGTGGCTCAC...ATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| 3UTR-3UTR GCA 90 bp | CCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATGCCTGGGTAAATTTCTaGATTTTTAGTCCAGATGGG | + |
|
Preference number: 2 (lower is better) Translates to: PSSWDDGRPPPCLGKFLHAWVNF*IFSPDG Trigger: CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGC...ATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| 3UTR-3UTR CCA 90 bp | TTGCCCAGACTGGTCTTAAACTCCTGTCTCCAGCAATCCTCCAAAGTGTTAGGAGTGAGCCACCGCGCCTaGCCCCAAATGTCATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPRLVLNSCLQQSSKVLGVSHRA*PQMSCF Trigger: AAAACATGACATTTGGGGCCAGGCGCGGTGGCTCAC...TCCTAACACTTTGGAGGATTGCTGGAGACAGGAGTTTAAGACCAGTCTGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381524.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCCCAGACTGGTCTTAAACTCCTGTCTCCAGCAATCCTCCAAAGTGTTAGGAGCCTGGGTAAATTTCTaGATTTTTAGTCCAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: LPRLVLNSCLQQSSKVLGAWVNF*IFSPDG Trigger: CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGC...TCCTAACACTTTGGAGGATTGCTGGAGACAGGAGTTTAAGACCAGTCTGGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381524.8 |
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| 3UTR CCA 72 bp | CAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTaGGTAAATTTCTGCATTTTTAGTCCAGATGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: QVAGMMGVRRRA*VNFCIFSPDGV Trigger: AACCCCATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR GCA 90 bp | TCAGCCTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATCTGGGAGACGGAGGTTaGAGTGAGCCGAGATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SASQVAGMMGVRRRAWVNLGDGG*SEPRLC Trigger: GCACAATCTCGGCTCACTGCAACCTCCGTCTCCCAG...ATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAGGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417535.7 |
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| CDS-3UTR CCA 90 bp | CGTGCCTGGCCCTCTCTACCGTCTTCTCCTCCTTTTCTTGACCACCACCCTGCCATGAGCCACCGTGCCTaGCCCTCTCTACCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAWPSLPSSPPFLDHHPAMSHRA*PSLPSS Trigger: AGAAGACGGTAGAGAGGGCCAGGCACGGTGGCTCAT...GGCAGGGTGGTGGTCAAGAAAAGGAGGAGAAGACGGTAGAGAGGGCCAGGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381509.8 |
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| CDS-3UTR CCA 90 bp | CACCGTGCCTGGCCCTCTCTACCGTCTTCTCCTCCTTTTCTTGACCACCACCCTCCACGTTGGCCAGGCTaGTCTCGAACCTCTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRAWPSLPSSPPFLDHHPPRWPG*SRTSDL Trigger: GAGGTCAGAGGTTCGAGACCAGCCTGGCCAACGTGG...AGGGTGGTGGTCAAGAAAAGGAGGAGAAGACGGTAGAGAGGGCCAGGCACGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381509.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATCTCCACGGATTTTCCTaGTGTAAACCCCACGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SASQVAGMMGVRRRAWVNLHGFS*CKPHGI Trigger: GATGCCGTGGGGTTTACAGCAGGAAAATCCGTGGAG...ATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 |
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| CDS-3UTR CCA 90 bp | TCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCGCAATGGTGCGATCTTaGCTCACTACAACCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQVAGMMGVRRRAWVNFCAMVRS*LTTTSA Trigger: GGCGGAGGTTGTAGTGAGCCAAGATCGCACCATTGC...GCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | CTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGGCAATGGTGCGATCTTaGCTCACTACAACCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSSWDDGRPPPCLGKFLAMVRS*LTTTSA Trigger: GGCGGAGGTTGTAGTGAGCCAAGATCGCACCATTGC...CAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | CCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATCCCGTCGTCAGAACCTaGGAGTCTGAGGCAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSSWDDGRPPPCLGKFLHPVVRT*ESEAGE Trigger: TTCTCCTGCCTCAGACTCCCAGGTTCTGACGACGGG...ATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417535.7 |
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| CDS-3UTR TCA 90 bp | CTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGGCCTGGGTGACAGAGTaGGACCCAAATTCAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSSWDDGRPPPCLGKFLAWVTE*DPNSMA Trigger: AGCCATTGAATTTGGGTCTCACTCTGTCACCCAGGC...CAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417535.7 |
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| CDS-3UTR GCA 90 bp | CGTGCCTGGCCCTCTCTACCGTCTTCTCCTCCTTTTCTTGACCACCACCCTGCCCTCCACGGATTTTCCTaGTGTAAACCCCACGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RAWPSLPSSPPFLDHHPALHGFS*CKPHGI Trigger: GATGCCGTGGGGTTTACAGCAGGAAAATCCGTGGAG...GGCAGGGTGGTGGTCAAGAAAAGGAGGAGAAGACGGTAGAGAGGGCCAGGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381509.8 |
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| CDS-3UTR GCA 90 bp | TCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCCTCCACGGATTTTCCTaGTGTAAACCCCACGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQVAGMMGVRRRAWVNFCLHGFS*CKPHGI Trigger: GATGCCGTGGGGTTTACAGCAGGAAAATCCGTGGAG...GCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 |
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| CDS-3UTR GCA 90 bp | CTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCTCCACGGATTTTCCTaGTGTAAACCCCACGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPSSWDDGRPPPCLGKFLLHGFS*CKPHGI Trigger: GATGCCGTGGGGTTTACAGCAGGAAAATCCGTGGAG...CAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 |
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| CDS-3UTR CCA 90 bp | TCAGCCTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTTTCCGTGCCAGGCTaGGTATTCTTTCTGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SASQVAGMMGVRRRAWVNFSVPG*VFFLWT Trigger: CGTCCACAGAAAGAATACCCAGCCTGGCACGGAAAA...ATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAGGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR TCA 90 bp | CACCGTGCCTGGCCCTCTCTACCGTCTTCTCCTCCTTTTCTTGACCACCACCCTCTGGTCTCGAACCTCTaGCCTCAGATGATCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: HRAWPSLPSSPPFLDHHPLVSNL*PQMIHM Trigger: CATGTGGATCATCTGAGGTCAGAGGTTCGAGACCAG...AGGGTGGTGGTCAAGAAAAGGAGGAGAAGACGGTAGAGAGGGCCAGGCACGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381509.8 |
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| CDS-3UTR GCA 90 bp | CCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTGCCCAGGCTGGATTaGAATGGCGCAATCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSSWDDGRPPPCLGKFLHLPRLD*NGAISA Trigger: AGCTGAGATTGCGCCATTGCAATCCAGCCTGGGCAA...ATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381524.8 |
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| CDS-3UTR CCA 90 bp | CGTGCCTGGCCCTCTCTACCGTCTTCTCCTCCTTTTCTTGACCACCACCCTGCCTTTTCCGTGCCAGGCTaGGTATTCTTTCTGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: RAWPSLPSSPPFLDHHPAFSVPG*VFFLWT Trigger: CGTCCACAGAAAGAATACCCAGCCTGGCACGGAAAA...GGCAGGGTGGTGGTCAAGAAAAGGAGGAGAAGACGGTAGAGAGGGCCAGGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381509.8 |
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| CDS-3UTR CCA 90 bp | CTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGTTTTCCGTGCCAGGCTaGGTATTCTTTCTGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: LPSSWDDGRPPPCLGKFLFSVPG*VFFLWT Trigger: CGTCCACAGAAAGAATACCCAGCCTGGCACGGAAAA...CAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | TCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCTTTTCCGTGCCAGGCTaGGTATTCTTTCTGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: SQVAGMMGVRRRAWVNFCFSVPG*VFFLWT Trigger: CGTCCACAGAAAGAATACCCAGCCTGGCACGGAAAA...GCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | TCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCCAGGTTGGTGTGCAATaGTGCGATCTTGGCTCACTA | + |
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Preference number: 4 (lower is better) Translates to: SQVAGMMGVRRRAWVNFCQVGVQ*CDLGSL Trigger: TAGTGAGCCAAGATCGCACCATTGCACACCAACCTG...GCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | CTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCAGGTTGGTGTGCAATaGTGCGATCTTGGCTCACTA | + |
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Preference number: 4 (lower is better) Translates to: LPSSWDDGRPPPCLGKFLQVGVQ*CDLGSL Trigger: TAGTGAGCCAAGATCGCACCATTGCACACCAACCTG...CAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | CTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGAGAGAAGGGAAGAGCTaGTCAAATGAGGGGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: LPSSWDDGRPPPCLGKFLREGKS*SNEGSW Trigger: CCATGACCCCTCATTTGACCAGCTCTTCCCTTCTCT...CAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432318.8 |
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| CDS-3UTR CCA 90 bp | ATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATGGGGCAATGGTGCGATCTTaGCTCACTACAACCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: MGVRRRAWVNFCIFSPDGAMVRS*LTTTSA Trigger: GGCGGAGGTTGTAGTGAGCCAAGATCGCACCATTGC...CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR TCA 90 bp | TCAGCCTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATCATTGCTGGGAGGGTTaGATCGTTCTATTTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SASQVAGMMGVRRRAWVNHCWEG*IVLFSL Trigger: CAAAGAAAATAGAACGATTCAACCCTCCCAGCAATG...ATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR GCA 90 bp | TCAGCCTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATGCCTGGGTAAATTTCTaGATTTTTAGTCCAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: SASQVAGMMGVRRRAWVNAWVNF*IFSPDG Trigger: CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGC...ATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR TCA 90 bp | CTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTGCTGGGAGGGTTaGATCGTTCTATTTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LPSSWDDGRPPPCLGKFLHCWEG*IVLFSL Trigger: CAAAGAAAATAGAACGATTCAACCCTCCCAGCAATG...CAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR TCA 90 bp | TCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCCATTGCTGGGAGGGTTaGATCGTTCTATTTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SQVAGMMGVRRRAWVNFCHCWEG*IVLFSL Trigger: CAAAGAAAATAGAACGATTCAACCCTCCCAGCAATG...GCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR TCA 90 bp | ATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATGGGAGCTTACTGTCAGCTTaGACTCAAGTGATCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: MGVRRRAWVNFCIFSPDGSLLSA*TQVILP Trigger: CGGGAGGATCACTTGAGTTCAAGCTGACAGTAAGCT...CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381524.8 |
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| CDS-3UTR GCA 90 bp | CTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGGCCTGGGTAAATTTCTaGATTTTTAGTCCAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: LPSSWDDGRPPPCLGKFLAWVNF*IFSPDG Trigger: CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGC...CAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR GCA 90 bp | TCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCGCCTGGGTAAATTTCTaGATTTTTAGTCCAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: SQVAGMMGVRRRAWVNFCAWVNF*IFSPDG Trigger: CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGC...GCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | ATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATGGGTTTTCCGTGCCAGGCTaGGTATTCTTTCTGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: MGVRRRAWVNFCIFSPDGFSVPG*VFFLWT Trigger: CGTCCACAGAAAGAATACCCAGCCTGGCACGGAAAA...CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | ATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATGTGAGCCACCGCGCCTaGCCCCAAATGTCATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: MMGVRRRAWVNFCIFSPDVSHRA*PQMSCF Trigger: AAAACATGACATTTGGGGCCAGGCGCGGTGGCTCAC...ATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | ATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATGGGCAGGTTGGTGTGCAATaGTGCGATCTTGGCTCACTA | + |
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Preference number: 4 (lower is better) Translates to: MGVRRRAWVNFCIFSPDGQVGVQ*CDLGSL Trigger: TAGTGAGCCAAGATCGCACCATTGCACACCAACCTG...CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | ATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATAGCCTCCCAGATAGCTaGCACTACAGGCACAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: MMGVRRRAWVNFCIFSPDSLPDS*HYRHKP Trigger: TGGCTTGTGCCTGTAGTGCCAGCTATCTGGGAGGCT...ATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381524.8 |
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| CDS-3UTR TCA 90 bp | TCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCCTCCCTCCTTCTCTTTaGGTTTCGTATGTACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SQVAGMMGVRRRAWVNFCLPPSL*VSYVQK Trigger: TTTTTGTACATACGAAACTCAAAGAGAAGGAGGGAG...GCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR TCA 90 bp | CACCGTGCCTGGCCCTCTCTACCGTCTTCTCCTCCTTTTCTTGACCACCACCCTCATTGCTGGGAGGGTTaGATCGTTCTATTTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: HRAWPSLPSSPPFLDHHPHCWEG*IVLFSL Trigger: CAAAGAAAATAGAACGATTCAACCCTCCCAGCAATG...AGGGTGGTGGTCAAGAAAAGGAGGAGAAGACGGTAGAGAGGGCCAGGCACGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381509.8 |
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| CDS-3UTR TCA 90 bp | CCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATCATTGCTGGGAGGGTTaGATCGTTCTATTTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PSSWDDGRPPPCLGKFLHHCWEG*IVLFSL Trigger: CAAAGAAAATAGAACGATTCAACCCTCCCAGCAATG...ATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR GCA 90 bp | ATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATCTCCACGGATTTTCCTaGTGTAAACCCCACGGCATC | + |
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Preference number: 4 (lower is better) Translates to: MMGVRRRAWVNFCIFSPDLHGFS*CKPHGI Trigger: GATGCCGTGGGGTTTACAGCAGGAAAATCCGTGGAG...ATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 |
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| CDS-3UTR TCA 90 bp | CCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATCTCCCTCCTTCTCTTTaGGTTTCGTATGTACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: PSSWDDGRPPPCLGKFLHLPPSL*VSYVQK Trigger: TTTTTGTACATACGAAACTCAAAGAGAAGGAGGGAG...ATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR TCA 90 bp | CACCGTGCCTGGCCCTCTCTACCGTCTTCTCCTCCTTTTCTTGACCACCACCCTCTCCCTCCTTCTCTTTaGGTTTCGTATGTACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: HRAWPSLPSSPPFLDHHPLPPSL*VSYVQK Trigger: TTTTTGTACATACGAAACTCAAAGAGAAGGAGGGAG...AGGGTGGTGGTCAAGAAAAGGAGGAGAAGACGGTAGAGAGGGCCAGGCACGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381509.8 |
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| CDS-3UTR CCA 90 bp | ATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATCAGGTTGGTGTGCAATaGTGCGATCTTGGCTCACTA | + |
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Preference number: 4 (lower is better) Translates to: MMGVRRRAWVNFCIFSPDQVGVQ*CDLGSL Trigger: TAGTGAGCCAAGATCGCACCATTGCACACCAACCTG...ATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR TCA 90 bp | ATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATGGGCATTGCTGGGAGGGTTaGATCGTTCTATTTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: MGVRRRAWVNFCIFSPDGHCWEG*IVLFSL Trigger: CAAAGAAAATAGAACGATTCAACCCTCCCAGCAATG...CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000355432.8 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CCA 90 bp | ATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATGGGTTTGAGACAGAGAGATaGGGTCTTAGTTTGTTACCC | + |
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Preference number: 4 (lower is better) Translates to: MGVRRRAWVNFCIFSPDGFETER*GLSLLP Trigger: GGGTAACAAACTAAGACCCCATCTCTCTGTCTCAAA...CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381524.8 |
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| CDS-3UTR TCA 90 bp | ATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATGGGCTCCCTCCTTCTCTTTaGGTTTCGTATGTACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: MGVRRRAWVNFCIFSPDGLPPSL*VSYVQK Trigger: TTTTTGTACATACGAAACTCAAAGAGAAGGAGGGAG...CCCATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR TCA 90 bp | ATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATCTCCCTCCTTCTCTTTaGGTTTCGTATGTACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: MMGVRRRAWVNFCIFSPDLPPSL*VSYVQK Trigger: TTTTTGTACATACGAAACTCAAAGAGAAGGAGGGAG...ATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CAA 90 bp | CTCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGTCTCCCTCCTTCTCTTaGAGTTTCGTATGTACAAAA | + |
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Preference number: 5 (lower is better) Translates to: LPSSWDDGRPPPCLGKFLSPSFS*SFVCTK Trigger: TTTTGTACATACGAAACTCAAAGAGAAGGAGGGAGA...CAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CAA 90 bp | TCCCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCTCTCCCTCCTTCTCTTaGAGTTTCGTATGTACAAAA | + |
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Preference number: 5 (lower is better) Translates to: SQVAGMMGVRRRAWVNFCSPSFS*SFVCTK Trigger: TTTTGTACATACGAAACTCAAAGAGAAGGAGGGAGA...GCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CAA 90 bp | CCAAGTAGCTGGGATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTCTCCCTCCTTCTCTTaGAGTTTCGTATGTACAAAA | + |
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Preference number: 5 (lower is better) Translates to: PSSWDDGRPPPCLGKFLHSPSFS*SFVCTK Trigger: TTTTGTACATACGAAACTCAAAGAGAAGGAGGGAGA...ATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCATCCCAGCTACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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| CDS-3UTR CAA 90 bp | CACCGTGCCTGGCCCTCTCTACCGTCTTCTCCTCCTTTTCTTGACCACCACCCTTCTCCCTCCTTCTCTTaGAGTTTCGTATGTACAAAA | + |
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Preference number: 5 (lower is better) Translates to: HRAWPSLPSSPPFLDHHPSPSFS*SFVCTK Trigger: TTTTGTACATACGAAACTCAAAGAGAAGGAGGGAGA...AGGGTGGTGGTCAAGAAAAGGAGGAGAAGACGGTAGAGAGGGCCAGGCACGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381509.8 |
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| CDS-3UTR CAA 90 bp | ATGATGGGCGTCCGCCGCCGTGCCTGGGTAAATTTCTGCATTTTTAGTCCAGATTCTCCCTCCTTCTCTTaGAGTTTCGTATGTACAAAA | + |
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Preference number: 5 (lower is better) Translates to: MMGVRRRAWVNFCIFSPDSPSFS*SFVCTK Trigger: TTTTGTACATACGAAACTCAAAGAGAAGGAGGGAGA...ATCTGGACTAAAAATGCAGAAATTTACCCAGGCACGGCGGCGGACGCCCATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000355432.8 ENST00000355805.7 ENST00000381524.8 ENST00000381529.9 ENST00000417535.7 ENST00000432318.8 ENST00000486791.6 ENST00000501036.7 |
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