Pregenerated sensors for CSF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000164400Ensembl transcript IDs: ENST00000296871.4
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCAGTGTGGCCCAGGGCAGGTCCAGGCCACTCCCACCATGGCTGTaGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: VSVAQGRSRPLPPWL*PTPWSLQDDHPEFL Trigger: TAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAGTGGCCTGGACCTGCCCTGGGCCACACTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| 3UTR CCA 90 bp | CAGGGCAGGTCCAGGCCACTCCCACCATGGCTGTGGCCCACCCCTTaGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTCTTGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: QGRSRPLPPWLWPTP*SLQDDHPEFLALVS Trigger: TGAAACAAGAGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAGTGGCCTGGACCTGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTAGCAGCTCCCCGGCTTaGCCAGCCTCATCTGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: WLWPTPWSLQDDHPEFLASSSPA*PASSGR Trigger: CCGGCCAGATGAGGCTGGCCAAGCCGGGGAGCTGCT...AGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| 3UTR-3UTR CAA 90 bp | TCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTGAGCAGCTCCCCGGCTaGGCCAGCCTCATCTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: SHHGCGPPLGPSKMTILSEQLPG*ASLIWP Trigger: CGGCCAGATGAGGCTGGCCAAGCCGGGGAGCTGCTC...ACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| 3UTR CCA 72 bp | TCCAGGCCACTCCCACCATGGCTGTGGCCCACCCCTTaGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: SRPLPPWLWPTP*SLQDDHPEFLA Trigger: AGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAGTGGCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| 3UTR TCA 72 bp | CAAGATGACCATCCTGAGTTTCTAGCTCTTGTTTCATaGGAGAGCAGCTCCCCGGCTTGGCCAGCCTCATCT | + |
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Preference number: 3 (lower is better) Translates to: QDDHPEFLALVS*ESSSPAWPASS Trigger: AGATGAGGCTGGCCAAGCCGGGGAGCTGCTCTCTCATGAAACAAGAGCTAGAAACTCAGGATGGTCATCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR GCA 90 bp | CTCTTGTTTCATGAGAGAGCAGCTCCCCGGCTTGGCCAGCCTCATCTGGCCGGTGGGCGAGCGGGCGGGTaGAGAGATGCTGCAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLFHERAAPRLGQPHLAGGRAGG*RDAAGH Trigger: GTGGCCTGCAGCATCTCTGCACCCGCCCGCTCGCCC...ACCGGCCAGATGAGGCTGGCCAAGCCGGGGAGCTGCTCTCTCATGAAACAAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | TCCAGGCCACTCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCTCCCACCATGGCTGTaGCCCACCCCTTGGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SRPLPPWLWPTPWSLQDDLPPWL*PTPWSL Trigger: GAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAG...GTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAGTGGCCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR GCA 90 bp | CTCTTGTTTCATGAGAGAGCAGCTCCCCGGCTTGGCCAGCCTCATCTGGCCGGTCTGCCCCGCAGGCCCTaGTTGTACAGCTCCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LLFHERAAPRLGQPHLAGLPRRP*LYSSRR Trigger: CCGCCTGGAGCTGTACAAGCAGGGCCTGCGGGGCAG...ACCGGCCAGATGAGGCTGGCCAAGCCGGGGAGCTGCTCTCTCATGAAACAAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | TCCAGGCCACTCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACAGACGCCGGGCCTCCTaGATGGCATTCACATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SRPLPPWLWPTPWSLQDDRRRAS*MAFTCS Trigger: GGAGCATGTGAATGCCATCCAGGAGGCCCGGCGTCT...GTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAGTGGCCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | CACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCAGGCCACTCCCACCATaGCTGTGGCCCACCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: HHGCGPPLGPSKMTILSFRPLPP*LWPTPW Trigger: CCAAGGGGTGGGCCACAGCCATGGTGGGAGTGGCCT...GAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | TCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTGTATCAGGGTCAGTGTaGCCCAGGGCAGGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SHHGCGPPLGPSKMTILSVSGSV*PRAGPG Trigger: GCCTGGACCTGCCCTGGGCCACACTGACCCTGATAC...ACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | TGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTCTTGTTAGCAGCTCCCCGGCTTaGCCAGCCTCATCTGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: WPTPWSLQDDHPEFLALVSSSPA*PASSGR Trigger: CCGGCCAGATGAGGCTGGCCAAGCCGGGGAGCTGCT...AACAAGAGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | TCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTCTGTGGCCCACCCCTTaGTCCCTCCAAGATGACCAT | + |
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Preference number: 4 (lower is better) Translates to: SHHGCGPPLGPSKMTILSLWPTP*SLQDDH Trigger: ATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAG...ACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | CACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCGCTGCTTGTAGTGGCTaGCCATCATGGTCAAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: HHGCGPPLGPSKMTILSFAACSG*PSWSRG Trigger: GCCCCTTGACCATGATGGCCAGCCACTACAAGCAGC...GAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | TGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTCTTGTTGCCGGGCCTCCTGGATaGCATTCACATGCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WPTPWSLQDDHPEFLALVAGPPG*HSHAPR Trigger: CCTGGGAGCATGTGAATGCCATCCAGGAGGCCCGGC...AACAAGAGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | CACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCGGAAGTTTCCGGGGTTaGAGGGCAGTGCTGCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: HHGCGPPLGPSKMTILSFGSFRG*RAVLLV Trigger: TACAAGCAGCACTGCCCTCCAACCCCGGAAACTTCC...GAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR TCA 90 bp | CACTCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGCAGTCAAAGGGGATaGCAAGCAGAAAGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: HSHHGCGPPLGPSKMTILSSQRG*QAESPS Trigger: TGAAGGACTTTCTGCTTGTCATCCCCTTTGACTGCT...CAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR GCA 90 bp | CTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTCTTTGGATGGCATTCACATaGTCCCAGGGCTGCGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LWPTPWSLQDDHPEFLALWMAFT*SQGCVL Trigger: CAGCACGCAGCCCTGGGAGCATGTGAATGCCATCCA...AAGAGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR TCA 90 bp | CTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTCTTCTAGCTCTTGTTTCATaGGAGAGCAGCTCCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: LWPTPWSLQDDHPEFLALLALVS*ESSSPA Trigger: AGCCGGGGAGCTGCTCTCTCATGAAACAAGAGCTAG...AAGAGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR GCA 90 bp | CTCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGATATTCCCATTCTTCTaGCATGCCTGTATCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LPPWLWPTPWSLQDDHPEIFPFF*HACIRV Trigger: GACCCTGATACAGGCATGGCAGAAGAATGGGAATAT...CTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | TGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTAGGCAGGTCGGCTCCTaGAGGTCAAACATTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: WLWPTPWSLQDDHPEFLARQVGS*RSNISE Trigger: CTCAGAAATGTTTGACCTCCAGGAGCCGACCTGCCT...AGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR TCA 90 bp | TCCAGGCCACTCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACGAGGTCAAACATTTCTaGGATGACTTCTACTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SRPLPPWLWPTPWSLQDDEVKHF*DDFYCF Trigger: GAAACAGTAGAAGTCATCTCAGAAATGTTTGACCTC...GTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAGTGGCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR GCA 90 bp | TGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTGGTGATAATCTGGGTTaGACAGGAAGTTTCCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: WLWPTPWSLQDDHPEFLAGDNLG*TGSFRG Trigger: ACCCCGGAAACTTCCTGTGCAACCCAGATTATCACC...AGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CCA 90 bp | CTCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTCAAAGGTGATAATCTaGGTTGCACAGGAAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LPPWLWPTPWSLQDDHPESKVII*VAQEVS Trigger: GGAAACTTCCTGTGCAACCCAGATTATCACCTTTGA...CTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS CCA 90 bp | CCTCCTGGATGGCATTCACATGCTCCCAGGGCTGCGTGCTGGGGCTaGGCGAGCGGGCGGGTGCAGAGATGCTGCAGGCCACAGTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PPGWHSHAPRAACWG*ASGRVQRCCRPQCP Trigger: TGGGCACTGTGGCCTGCAGCATCTCTGCACCCGCCCGCTCGCCCAGCCCCAGCACGCAGCCCTGGGAGCATGTGAATGCCATCCAGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS GCA 90 bp | ATGGTCAAGGGGCCCTTGAGCTTGGTGAGGCTGCCCCGCAGGCCCTaGTTGTACAGCTCCAGGCGGGTCTGTAGGCAGGTCGGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: MVKGPLSLVRLPRRP*LYSSRRVCRQVGSW Trigger: CCAGGAGCCGACCTGCCTACAGACCCGCCTGGAGCTGTACAAGCAGGGCCTGCGGGGCAGCCTCACCAAGCTCAAGGGCCCCTTGACCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CAA 90 bp | TCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTAAGGGGCCCTTGAGCTaGGTGAGGCTGCCCCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SHHGCGPPLGPSKMTILSKGPLS*VRLPRR Trigger: CCTGCGGGGCAGCCTCACCAAGCTCAAGGGCCCCTT...ACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CAA 90 bp | TGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTCTTGTTCCCCGCAGGCCCTGCTaGTACAGCTCCAGGCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: WPTPWSLQDDHPEFLALVPRRPC*YSSRRV Trigger: GACCCGCCTGGAGCTGTACAAGCAGGGCCTGCGGGG...AACAAGAGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS TCA 90 bp | TGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTCTTGTTTCATaGGAGAGCAGCTCCCCGGCTTGGCCAGCCTCATCTGGCCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: WSLQDDHPEFLALVS*ESSSPAWPASSGRS Trigger: AGACCGGCCAGATGAGGCTGGCCAAGCCGGGGAGCTGCTCTCTCATGAAACAAGAGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CAA 90 bp | CTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTTCTAGCTCTTAGGAAGTTTCCGGGGTaGGAGGGCAGTGCTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: LWPTPWSLQDDHPEFLALRKFPG*EGSAAC Trigger: ACAAGCAGCACTGCCCTCCAACCCCGGAAACTTCCT...AAGAGCTAGAAACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS-3UTR CAA 90 bp | TCCCACCATGGCTGTGGCCCACCCCTTGGTCCCTCCAAGATGACCATCCTGAGTTCCTTCAGGTTCTCTTaGAAACTTTCAAAGGTGATA | + |
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Preference number: 5 (lower is better) Translates to: SHHGCGPPLGPSKMTILSSFRFS*KLSKVI Trigger: TATCACCTTTGAAAGTTTCAAAGAGAACCTGAAGGA...ACTCAGGATGGTCATCTTGGAGGGACCAAGGGGTGGGCCACAGCCATGGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS CCA 72 bp | TGGCATTCACATGCTCCCAGGGCTGCGTGCTGGGGCTaGGCGAGCGGGCGGGTGCAGAGATGCTGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WHSHAPRAACWG*ASGRVQRCCRP Trigger: TGGCCTGCAGCATCTCTGCACCCGCCCGCTCGCCCAGCCCCAGCACGCAGCCCTGGGAGCATGTGAATGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS CAA 90 bp | GTCAAGGGGCCCTTGAGCTTGGTGAGGCTGCCCCGCAGGCCCTGCTaGTACAGCTCCAGGCGGGTCTGTAGGCAGGTCGGCTCCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VKGPLSLVRLPRRPC*YSSRRVCRQVGSWR Trigger: CCTCCAGGAGCCGACCTGCCTACAGACCCGCCTGGAGCTGTACAAGCAGGGCCTGCGGGGCAGCCTCACCAAGCTCAAGGGCCCCTTGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS GCA 72 bp | GGGCCCTTGAGCTTGGTGAGGCTGCCCCGCAGGCCCTaGTTGTACAGCTCCAGGCGGGTCTGTAGGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: GPLSLVRLPRRP*LYSSRRVCRQV Trigger: GACCTGCCTACAGACCCGCCTGGAGCTGTACAAGCAGGGCCTGCGGGGCAGCCTCACCAAGCTCAAGGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS CCA 72 bp | CTCTACTCAGGTTCAGGAGACGCCGGGCCTCCTGGATaGCATTCACATGCTCCCAGGGCTGCGTGCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LYSGSGDAGPPG*HSHAPRAACWG Trigger: GCCCCAGCACGCAGCCCTGGGAGCATGTGAATGCCATCCAGGAGGCCCGGCGTCTCCTGAACCTGAGTAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS CCA 72 bp | GTGTCTCTACTCAGGTTCAGGAGACGCCGGGCCTCCTaGATGGCATTCACATGCTCCCAGGGCTGCGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSLLRFRRRRAS*MAFTCSQGCVL Trigger: CAGCACGCAGCCCTGGGAGCATGTGAATGCCATCCAGGAGGCCCGGCGTCTCCTGAACCTGAGTAGAGACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS CAA 72 bp | TCTAGCTCTTGTTTCATGAGAGAGCAGCTCCCCGGCTaGGCCAGCCTCATCTGGCCGGTCTCACTCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: SSSCFMREQLPG*ASLIWPVSLLD Trigger: GTCCAGGAGTGAGACCGGCCAGATGAGGCTGGCCAAGCCGGGGAGCTGCTCTCTCATGAAACAAGAGCTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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| CDS CCA 72 bp | TTCAGGTTCTCTTTGAAACTTTCAAAGGTGATAATCTaGGTTGCACAGGAAGTTTCCGGGGTTGGAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: FRFSLKLSKVII*VAQEVSGVGGQ Trigger: CTGCCCTCCAACCCCGGAAACTTCCTGTGCAACCCAGATTATCACCTTTGAAAGTTTCAAAGAGAACCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296871.4 |
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