RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSF1R (Homo sapiens)

Ensembl gene IDs: ENSG00000182578

Ensembl transcript IDs: ENST00000286301.7, ENST00000502660.5, ENST00000504875.5, ENST00000509861.1, ENST00000511344.1, ENST00000513609.1, ENST00000515068.1, ENST00000515239.5, ENST00000543093.1, ENST00000675795.1

Found 688 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTaGAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCC +
Preference number: 1 (lower is better)
Translates to: LEARKAMPWATWLEK*SRSRSSRGRPSSLS
Trigger: GGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR GCA 90 bp CCTCCAGCTCACTGCTGCTGCTGCCGCTGCCACCGCTTCTGCTGCTaGTCGGCAGATTGGTATAGTCCCGCTCTCTCCTGTCCTCTTGGG +
Preference number: 1 (lower is better)
Translates to: PPAHCCCCRCHRFCC*SADWYSPALSCPLG
Trigger: CCCAAGAGGACAGGAGAGAGCGGGACTATACCAATCTGCCGAGCAGCAGCAGAAGCGGTGGCAGCGGCAGCAGCAGCAGTGAGCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR CCA 90 bp TGCTGCTGCTGCCGCTGCCACCGCTTCTGCTGCTGCTCGGCAGATTaGTATAGTCCCGCTCTCTCCTGTCCTCTTGGGCCTGCTCCTGAA +
Preference number: 1 (lower is better)
Translates to: CCCCRCHRFCCCSAD*YSPALSCPLGPAPE
Trigger: TTCAGGAGCAGGCCCAAGAGGACAGGAGAGAGCGGGACTATACCAATCTGCCGAGCAGCAGCAGAAGCGGTGGCAGCGGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR TCA 90 bp CCCCTGACTGGCAGTGATGGCCCATGCTCAGGAAGTGGGATCCTCTaGCCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGC +
Preference number: 1 (lower is better)
Translates to: PLTGSDGPCSGSGIL*PPLNPSPSQVSELG
Trigger: GCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGGCCATCACTGCCAGTCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR GCA 90 bp TTTGTGCTTCCTGCTTGGTGTGGCCAGCCACATGCCAAGGTCCCCTaGCTTCTAGCCCAGAATGACGGGACTGGGCAGAACACCCCCAAC +
Preference number: 1 (lower is better)
Translates to: FVLPAWCGQPHAKVP*LLAQNDGTGQNTPN
Trigger: GTTGGGGGTGTTCTGCCCAGTCCCGTCATTCTGGGCTAGAAGGCAGGGGACCTTGGCATGTGGCTGGCCACACCAAGCAGGAAGCACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR TCA 90 bp GCAGTGATGGCCCATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTaGATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTG +
Preference number: 1 (lower is better)
Translates to: AVMAHAQEVGSSDLP*IPHLPKFQSWAELL
Trigger: CAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGGCCATCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR CCA 90 bp AGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTaGGCTGCAGCAAGGGCTGGGCGATATCCCCTTGCTCGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: SGTPCRQLLSRTDSC*AAARAGRYPLARSR
Trigger: CCTGCTGCGAGCAAGGGGATATCGCCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR GCA 90 bp GGGCAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTaGTCCAAGGGGCCTGAGCTGAGTGTGGTCTGTGAGCATCTGCTG +
Preference number: 1 (lower is better)
Translates to: GQRLRGPVRFLEEPS*SKGPELSVVCEHLL
Trigger: CAGCAGATGCTCACAGACCACACTCAGCTCAGGCCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR GCA 90 bp CCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTaGCACGTCCCGGTGGATGCAATTCTTGGAAGCGAGGAAGGCCAT +
Preference number: 1 (lower is better)
Translates to: PNLGHMTIGQQHVTR*HVPVDAILGSEEGH
Trigger: ATGGCCTTCCTCGCTTCCAAGAATTGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR TCA 90 bp AATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGTaGAATGACCGAAGGCAGAGTTTGTATGTTCTCCCCGTGTCGCCC +
Preference number: 1 (lower is better)
Translates to: NPSPSQVSELGRAVE*NDRRQSLYVLPVSP
Trigger: GGGCGACACGGGGAGAACATACAAACTCTGCCTTCGGTCATTTCACTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR CCA 90 bp CATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTaGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGAG +
Preference number: 1 (lower is better)
Translates to: HFHEDKGIRKEGSTS*HSKHEANTMRTVGE
Trigger: CTCCCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp GCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGCACGTTACGCGCTaGCACGTCCCGGTGGATGCA +
Preference number: 2 (lower is better)
Translates to: AGEVKQVPELQGPSILLVQHVTR*HVPVDA
Trigger: TGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTG...GACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR CCA 90 bp GCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCTGTCCACACCCTGGCTaGAGAAGCCACTGTCCGCTG +
Preference number: 2 (lower is better)
Translates to: AGEVKQVPELQGPSILLVCPHPG*RSHCPL
Trigger: CAGCGGACAGTGGCTTCTCCAGCCAGGGTGTGGACA...GACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
3UTR-3UTR TCA 90 bp GTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGTCCTCTGACCTCCCCTaGATCCCTCACCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: VKQVPELQGPSILLVQVLSSDLP*IPHLPK
Trigger: CTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGA...CAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR CCA 90 bp GTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGGCTGCCACGTCCCGGTaGATGCAATTCTTGGAAGCG +
Preference number: 2 (lower is better)
Translates to: VKQVPELQGPSILLVQVLAATSR*MQFLEA
Trigger: CGCTTCCAAGAATTGCATCCACCGGGACGTGGCAGC...CAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR CCA 90 bp GTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGTTGAATCAGCAGGCCTaGGTGGATGGGCCTGAGGTG +
Preference number: 2 (lower is better)
Translates to: VKQVPELQGPSILLVQVLLNQQA*VDGPEV
Trigger: CACCTCAGGCCCATCCACCCAGGCCTGCTGATTCAA...CAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
3UTR CAA 90 bp GCTGCTGCTCGGCAGATTGGTATAGTCCCGCTCTCTCCTGTCCTCTaGGGCCTGCTCCTGAAGGAAGGAGCAGATCTGCTGGAAGGTGGG +
Preference number: 2 (lower is better)
Translates to: AAARQIGIVPLSPVL*GLLLKEGADLLEGG
Trigger: CCCACCTTCCAGCAGATCTGCTCCTTCCTTCAGGAGCAGGCCCAAGAGGACAGGAGAGAGCGGGACTATACCAATCTGCCGAGCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR TCA 90 bp CGCTTCTGCTGCTGCTCGGCAGATTGGTATAGTCCCGCTCTCTCCTGTCCTCTTGGTGAGGCTGTGGAGTaGAGGCGGCGTATAGGGCAG +
Preference number: 2 (lower is better)
Translates to: RFCCCSADWYSPALSCPLGEAVE*RRRIGQ
Trigger: CTGCCCTATACGCCGCCTTCACTCCACAGCCTCACC...AAGAGGACAGGAGAGAGCGGGACTATACCAATCTGCCGAGCAGCAGCAGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR CCA 90 bp GGCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTGGTGGATGCAATTCTTaGAAGCGAGGAAGGCCATGC +
Preference number: 2 (lower is better)
Translates to: GWRSEAGPGAPGAVHPPCGGCNS*KRGRPC
Trigger: GCATGGCCTTCCTCGCTTCCAAGAATTGCATCCACC...ACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR CCA 90 bp GTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGGGTGGATGCAATTCTTaGAAGCGAGGAAGGCCATGC +
Preference number: 2 (lower is better)
Translates to: VKQVPELQGPSILLVQVLGGCNS*KRGRPC
Trigger: GCATGGCCTTCCTCGCTTCCAAGAATTGCATCCACC...CAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR CAA 90 bp GAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCGATATCCCCTaGCTCGCAGCAGGTCAGGTGCTCACTAGAGCTCTCCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: ELIVVGLQQGLGDIP*LAAGQVLTRALLLQ
Trigger: CTGGAGGAGGAGAGCTCTAGTGAGCACCTGACCTGCTGCGAGCAAGGGGATATCGCCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR GCA 90 bp GTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTGCCACAAGCGAGGAAGGCCATaGCCTGGGCTACTTGGCTGG +
Preference number: 2 (lower is better)
Translates to: VPNLGHMTIGQQHVTRCHKRGRP*PGLLGW
Trigger: CCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTT...GTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR GCA 90 bp AAGTTTGTGGGAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTTGCTGCTGCTGCCGCTaGCACCGCTTCTGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: KFVGGESGTPCRQLLSRTCCCCR*HRFCCC
Trigger: GCAGCAGCAGAAGCGGTGGCAGCGGCAGCAGCAGCA...AGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTCCCACAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR CCA 90 bp GCCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCCCATGCTCAGGAAGTaGGATCCTCTGACCTCCCCT +
Preference number: 2 (lower is better)
Translates to: ARSPQSWPHDHWSTARYAPMLRK*DPLTSP
Trigger: AGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGG...CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR TCA 90 bp TCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCGATATCCCCTTGGCTGAGTGTGGTCTGTaGGCATCTGCTGCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: SAELIVVGLQQGLGDIPLAECGL*ASAAPL
Trigger: GAGAGGAGCAGCAGATGCTCACAGACCACACTCAGC...CAAGGGGATATCGCCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR TCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGTGAGGCTGTGGAGTaGAGGCGGCGTATAGGGCAG +
Preference number: 2 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGGEAVE*RRRIGQ
Trigger: CTGCCCTATACGCCGCCTTCACTCCACAGCCTCACC...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR TCA 90 bp AAGTTTGTGGGAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTGGAAGTGGGATCCTCTaGCCTCCCCTGAATCCCTCA +
Preference number: 2 (lower is better)
Translates to: KFVGGESGTPCRQLLSRTGSGIL*PPLNPS
Trigger: TGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCC...AGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTCCCACAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR TCA 90 bp GTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTGCCACGGCGGGCATTGCCCTTaGCAATGTAGTTGGAGTCAT +
Preference number: 2 (lower is better)
Translates to: VPNLGHMTIGQQHVTRCHGGHCP*QCSWSH
Trigger: ATGACTCCAACTACATTGTCAAGGGCAATGCCCGCC...GTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR GCA 90 bp AAGTTTGTGGGAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTTTAGAGGAGCCATCCTaGTCCAAGGGGCCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: KFVGGESGTPCRQLLSRTLEEPS*SKGPEL
Trigger: CAGCTCAGGCCCCTTGGAGCAGGATGGCTCCTCTAA...AGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTCCCACAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR GCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTACAGCACGTTACGCGCTaGCACGTCCCGGTGGATGCA +
Preference number: 2 (lower is better)
Translates to: LSASLSSPKEPGFLSISVQHVTR*HVPVDA
Trigger: TGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTG...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR GCA 90 bp AAGTTTGTGGGAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTTCGCAGCAGGTCAGGTaGTCACTAGAGCTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: KFVGGESGTPCRQLLSRTSQQVR*SLELSS
Trigger: GGAGGAGAGCTCTAGTGAGCACCTGACCTGCTGCGA...AGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTCCCACAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR CCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGCCCATGCTCAGGAAGTaGGATCCTCTGACCTCCCCT +
Preference number: 2 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGPMLRK*DPLTSP
Trigger: AGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGG...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp GTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTGCCACTGGCCACATGACCATTaGTCAACAGCACGTTACGCG +
Preference number: 2 (lower is better)
Translates to: VPNLGHMTIGQQHVTRCHWPHDH*STARYA
Trigger: CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCA...GTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR TCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAGGCCGAGCTGTTGAGTaGAATGACCGAAGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLGRAVE*NDRRQS
Trigger: ACTCTGCCTTCGGTCATTTCACTCAACAGCTCGGCC...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR TCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTACCAAGGGGCCTGAGCTaGGTGTGGTCTGTGAGCATC +
Preference number: 2 (lower is better)
Translates to: AEHPQLLAATWLITAVPVPRGLS*VWSVSI
Trigger: GATGCTCACAGACCACACTCAGCTCAGGCCCCTTGG...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGCAGTGATGGCCCATaGTCAGGAAGTGGGATCCTC +
Preference number: 2 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGGSDGP*SGSGIL
Trigger: GAGGATCCCACTTCCTGAGCATGGGCCATCACTGCC...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGTTAGAGGAGCCATCCTaGTCCAAGGGGCCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: QLLAATWLITAVPVWGWELEEPS*SKGPEL
Trigger: CAGCTCAGGCCCCTTGGAGCAGGATGGCTCCTCTAA...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp GCCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGAGACACAGTCAAAGATaGTCTCTGGGGCCATCCACT +
Preference number: 2 (lower is better)
Translates to: ARSPQSWPHDHWSTARYARHSQR*SLGPST
Trigger: AGTGGATGGCCCCAGAGAGCATCTTTGACTGTGTCT...CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTATGTGGGAGGGGAGAGTaGTACTCCCTGTCGTCAACT +
Preference number: 2 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLCGRGE*YSLSST
Trigger: AGTTGACGACAGGGAGTACCACTCTCCCCTCCCACA...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGCCCATGCTCAGGAAGTaGGATCCTCTGACCTCCCCT +
Preference number: 2 (lower is better)
Translates to: QLLAATWLITAVPVWGWEPMLRK*DPLTSP
Trigger: AGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGG...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR TCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTATCCTCTGACCTCCCCTaGATCCCTCACCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: LSASLSSPKEPGFLSISVSSDLP*IPHLPK
Trigger: CTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGA...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR TCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAGCTGAGTGTGGTCTGTaGGCATCTGCTGCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: AEHPQLLAATWLITAVPVAECGL*ASAAPL
Trigger: GAGAGGAGCAGCAGATGCTCACAGACCACACTCAGC...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGTGTGGGAGGGGAGAGTaGTACTCCCTGTCGTCAACT +
Preference number: 2 (lower is better)
Translates to: QLLAATWLITAVPVWGWECGRGE*YSLSST
Trigger: AGTTGACGACAGGGAGTACCACTCTCCCCTCCCACA...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGCCCAAGTTTCAGAGCTaGGCCGAGCTGTTGAGTGAA +
Preference number: 2 (lower is better)
Translates to: HPQLLAATWLITAVPVWGPKFQS*AELLSE
Trigger: TTCACTCAACAGCTCGGCCCAGCTCTGAAACTTGGG...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTACCCAAGTTTCAGAGCTaGGCCGAGCTGTTGAGTGAA +
Preference number: 2 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLPKFQS*AELLSE
Trigger: TTCACTCAACAGCTCGGCCCAGCTCTGAAACTTGGG...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGCTTCCTGCTTGGTGTaGCCAGCCACATGCCAAGGT +
Preference number: 2 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGASCLV*PATCQG
Trigger: ACCTTGGCATGTGGCTGGCCACACCAAGCAGGAAGC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp CCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTCGAAGTCCCCAATCTTaGCCACATGACCATTGGTCA +
Preference number: 2 (lower is better)
Translates to: PCRQLLSRTDSCWAAARARSPQS*PHDHWS
Trigger: TGACCAATGGTCATGTGGCCAAGATTGGGGACTTCG...AGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR CCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTCGAAGTCCCCAATCTTaGCCACATGACCATTGGTCA +
Preference number: 2 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSRSPQS*PHDHWS
Trigger: TGACCAATGGTCATGTGGCCAAGATTGGGGACTTCG...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR CCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGGGCAAATGCAGGCTaGGCCATTTGGTATCCATCC +
Preference number: 2 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGGANAG*AIWYPS
Trigger: GGATGGATACCAAATGGCCCAGCCTGCATTTGCCCC...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
53% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR TCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGCCAATCTTGGCCACATaGCCATTGGTCAACAGCACG +
Preference number: 2 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGPILAT*PLVNST
Trigger: CGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGG...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR TCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGCGGGCATTGCCCTTaGCAATGTAGTTGGAGTCAT +
Preference number: 2 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGGGHCP*QCSWSH
Trigger: ATGACTCCAACTACATTGTCAAGGGCAATGCCCGCC...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR GCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGATCTGTGAGCATCTGCTaGTCCTCTCAGAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGSVSIC*SSQRGR
Trigger: TCTCCCTCTCTGAGAGGAGCAGCAGATGCTCACAGA...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTAGGAGTTTGTGCTTCCTaGTTGGTGTGGCCAGCCACA +
Preference number: 2 (lower is better)
Translates to: LSASLSSPKEPGFLSISVGVCAS*LVWPAT
Trigger: TGTGGCTGGCCACACCAAGCAGGAAGCACAAACTCC...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGGAGTTTGTGCTTCCTaGTTGGTGTGGCCAGCCACA +
Preference number: 2 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGGVCAS*LVWPAT
Trigger: TGTGGCTGGCCACACCAAGCAGGAAGCACAAACTCC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR TCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGAGACATCCCACGGCGTaGCTGTTAGTTAGGATGAGT +
Preference number: 2 (lower is better)
Translates to: QLLAATWLITAVPVWGWERHPTA*LLVRMS
Trigger: ACTCATCCTAACTAACAGTCACGCCGTGGGATGTCT...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR TCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAACTTGGCTGGAGAAGTaGAGCAGGTCCCGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTTWLEK*SRSRSS
Trigger: GGAGCTCCGGGACCTGCTTCACTTCTCCAGCCAAGT...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR TCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTACCCAGCAGGCCTGCATaGTGCTGTATATATTCTTTG +
Preference number: 2 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLPSRPA*CCIYSL
Trigger: CAAAGAATATATACAGCATCATGCAGGCCTGCTGGG...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR GCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGTCTGTGAGCATCTGCTaGTCCTCTCAGAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGSVSIC*SSQRGR
Trigger: TCTCCCTCTCTGAGAGGAGCAGCAGATGCTCACAGA...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGTGTGGCCAGCCACATaGCAAGGTCCCCTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPVWPAT*QGPLPS
Trigger: AGAAGGCAGGGGACCTTGGCATGTGGCTGGCCACAC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp CCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTTCCTTGTCCAGGTCTTaGTCAGAGAAGGAGTCATTT +
Preference number: 2 (lower is better)
Translates to: PCRQLLSRTDSCWAAARASLSRS*SEKESF
Trigger: AAATGACTCCTTCTCTGAGCAAGACCTGGACAAGGA...AGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR GCA 90 bp ATGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTCCTTGTCCAGGTCTTaGTCAGAGAAGGAGTCATTT +
Preference number: 2 (lower is better)
Translates to: MQFLEARKAMPWATWLEKSLSRS*SEKESF
Trigger: AAATGACTCCTTCTCTGAGCAAGACCTGGACAAGGA...CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR GCA 90 bp CTCCAAGGCCCAGCAGGCCTGCATGATGCTGTATATATTCTTTGGGGCAAATGCAGACACAGTCAAAGATaGTCTCTGGGGCCATCCACT +
Preference number: 2 (lower is better)
Translates to: LQGPAGLHDAVYILWGKCRHSQR*SLGPST
Trigger: AGTGGATGGCCCCAGAGAGCATCTTTGACTGTGTCT...GCATTTGCCCCAAAGAATATATACAGCATCATGCAGGCCTGCTGGGCCTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR TCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGGGAAGTGGGATCCTCTaGCCTCCCCTGAATCCCTCA +
Preference number: 2 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRGSGIL*PPLNPS
Trigger: TGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCC...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR TCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGCTGAGTGTGGTCTGTaGGCATCTGCTGCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPAECGL*ASAAPL
Trigger: GAGAGGAGCAGCAGATGCTCACAGACCACACTCAGC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGCAGTGATGGCCCATaGTCAGGAAGTGGGATCCTC +
Preference number: 2 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKGSDGP*SGSGIL
Trigger: GAGGATCCCACTTCCTGAGCATGGGCCATCACTGCC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR GCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGGCAGTGATGGCCCATaGTCAGGAAGTGGGATCCTC +
Preference number: 2 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPGSDGP*SGSGIL
Trigger: GAGGATCCCACTTCCTGAGCATGGGCCATCACTGCC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGAAGGTTCTACTAGTTaGCATAGCAAACACGAGGCC +
Preference number: 2 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGEGSTS*HSKHEA
Trigger: GGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTC...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGCTTCCTGCTTGGTGTaGCCAGCCACATGCCAAGGT +
Preference number: 2 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKASCLV*PATCQG
Trigger: ACCTTGGCATGTGGCTGGCCACACCAAGCAGGAAGC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR TCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGGCCGAGCTGTTGAGTaGAATGACCGAAGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPGRAVE*NDRRQS
Trigger: ACTCTGCCTTCGGTCATTTCACTCAACAGCTCGGCC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR TCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGGCCGAGCTGTTGAGTaGAATGACCGAAGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTGRAVE*NDRRQS
Trigger: ACTCTGCCTTCGGTCATTTCACTCAACAGCTCGGCC...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGCTTTTAGCTGCCACTTaGCTCATTACAGCAGTACCA +
Preference number: 2 (lower is better)
Translates to: QLLAATWLITAVPVWGWELLAAT*LITAVP
Trigger: TGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAG...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGCCCAAGTTTCAGAGCTaGGCCGAGCTGTTGAGTGAA +
Preference number: 2 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKPKFQS*AELLSE
Trigger: TTCACTCAACAGCTCGGCCCAGCTCTGAAACTTGGG...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTAGGAAGGCCATGCCCTaGGCTACTTGGCTGGAGAAG +
Preference number: 2 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVRKAMP*ATWLEK
Trigger: CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCT...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGAAGGTTCTACTAGTTaGCATAGCAAACACGAGGCC +
Preference number: 2 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKEGSTS*HSKHEA
Trigger: GGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR CAA 90 bp CATGATGCTGTATATATTCTTTGGGGCAAATGCAGGCTGGGCCATTaGGTATCCATCCTTCACCAGTTTATAGAACTTGCTGTTCACCAG +
Preference number: 2 (lower is better)
Translates to: HDAVYILWGKCRLGH*VSILHQFIELAVHQ
Trigger: CTGGTGAACAGCAAGTTCTATAAACTGGTGAAGGATGGATACCAAATGGCCCAGCCTGCATTTGCCCCAAAGAATATATACAGCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR GCA 72 bp CCTGCTTGGTGTGGCCAGCCACATGCCAAGGTCCCCTaGCTTCTAGCCCAGAATGACGGGACTGGGCAGAAC +
Preference number: 3 (lower is better)
Translates to: PAWCGQPHAKVP*LLAQNDGTGQN
Trigger: GTTCTGCCCAGTCCCGTCATTCTGGGCTAGAAGGCAGGGGACCTTGGCATGTGGCTGGCCACACCAAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR GCA 72 bp GGCTGGGCGATATCCCCTTGCTCGCAGCAGGTCAGGTaGTCACTAGAGCTCTCCTCCTCCAGCTCACTGCTG +
Preference number: 3 (lower is better)
Translates to: GWAISPCSQQVR*SLELSSSSSLL
Trigger: CAGCAGTGAGCTGGAGGAGGAGAGCTCTAGTGAGCACCTGACCTGCTGCGAGCAAGGGGATATCGCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR CAA 90 bp GGCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCGGTGGATGCAATTCTaGGAAGCGAGGAAGGCCATG +
Preference number: 3 (lower is better)
Translates to: GWRSEAGPGAPGAVHPPCRWMQF*EARKAM
Trigger: CATGGCCTTCCTCGCTTCCAAGAATTGCATCCACCG...ACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR GCA 72 bp TTGTTGGGCTGCAGCAAGGGCTGGGCGATATCCCCTTaGTCGCAGCAGGTCAGGTGCTCACTAGAGCTCTCC +
Preference number: 3 (lower is better)
Translates to: LLGCSKGWAISP*SQQVRCSLELS
Trigger: GGAGAGCTCTAGTGAGCACCTGACCTGCTGCGAGCAAGGGGATATCGCCCAGCCCTTGCTGCAGCCCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR TCA 72 bp GCCCATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTaGATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: AHAQEVGSSDLP*IPHLPKFQSWA
Trigger: GGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp GAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTTCTGCAATGCAGATTTaGAATCAGCAGGCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: EAGPGAPGAVHPPCPGLASAMQI*NQQAWV
Trigger: CACCCAGGCCTGCTGATTCAAAATCTGCATTGCAGA...AGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
3UTR GCA 72 bp GTTAGGATGAGTCAGCTTGGGGGAGTTTGTGCTTCCTaGTTGGTGTGGCCAGCCACATGCCAAGGTCCCCTG +
Preference number: 3 (lower is better)
Translates to: VRMSQLGGVCAS*LVWPATCQGPL
Trigger: CAGGGGACCTTGGCATGTGGCTGGCCACACCAAGCAGGAAGCACAAACTCCCCCAAGCTGACTCATCCTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR GCA 72 bp CCCGGTGGATGCAATTCTTGGAAGCGAGGAAGGCCATaGCCTGGGCTACTTGGCTGGAGAAGTGAAGCAGGT +
Preference number: 3 (lower is better)
Translates to: PGGCNSWKRGRP*PGLLGWRSEAG
Trigger: ACCTGCTTCACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCATCCACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR GCA 72 bp GGCCACATGACCATTGGTCAACAGCACGTTACGCGCTaGCACGTCCCGGTGGATGCAATTCTTGGAAGCGAG +
Preference number: 3 (lower is better)
Translates to: GHMTIGQQHVTR*HVPVDAILGSE
Trigger: CTCGCTTCCAAGAATTGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR-3UTR CAA 90 bp TGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGGTTTGTGCTTCCTGCTaGGTGTGGCCAGCCACATGC +
Preference number: 3 (lower is better)
Translates to: CRQLLSRTDSCWAAARAGVCASC*VWPATC
Trigger: GCATGTGGCTGGCCACACCAAGCAGGAAGCACAAAC...CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR TCA 72 bp GGCAGTGATGGCCCATGCTCAGGAAGTGGGATCCTCTaGCCTCCCCTGAATCCCTCACCTTCCCAAGTTTCA +
Preference number: 3 (lower is better)
Translates to: GSDGPCSGSGIL*PPLNPSPSQVS
Trigger: TGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGGCCATCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAGTTTGTGCTTCCTGCTaGGTGTGGCCAGCCACATGC +
Preference number: 3 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLVCASC*VWPATC
Trigger: GCATGTGGCTGGCCACACCAAGCAGGAAGCACAAAC...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTCGGTGGATGCAATTCTaGGAAGCGAGGAAGGCCATG +
Preference number: 3 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSRWMQF*EARKAM
Trigger: CATGGCCTTCCTCGCTTCCAAGAATTGCATCCACCG...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR GCA 72 bp CTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTaGTCCAAGGGGCCTGAGCTGAGTGTGGTCTGTGAG +
Preference number: 3 (lower is better)
Translates to: LRGPVRFLEEPS*SKGPELSVVCE
Trigger: CTCACAGACCACACTCAGCTCAGGCCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGAGCTGGGCCGAGCTGTaGAGTGAAATGACCGAAGGC +
Preference number: 3 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGSWAEL*SEMTEG
Trigger: GCCTTCGGTCATTTCACTCAACAGCTCGGCCCAGCT...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp GCCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTCCTTGTCCAGGTCTaGCTCAGAGAAGGAGTCATT +
Preference number: 3 (lower is better)
Translates to: ARSPQSWPHDHWSTARYALLVQV*LREGVI
Trigger: AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAG...CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
3UTR GCA 72 bp ATGACGGGACTGGGCAGAACACCCCCAACTTTTAGCTaGCACTTGGCTCATTACAGCAGTACCAGTATGGGG +
Preference number: 3 (lower is better)
Translates to: MTGLGRTPPTFS*HLAHYSSTSMG
Trigger: CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGCCCAGTCCCGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR CCA 72 bp GGAATCTCTGCAATGCAGATTTTGAATCAGCAGGCCTaGGTGGATGGGCCTGAGGTGGTGCACTTCCAACAG +
Preference number: 3 (lower is better)
Translates to: GISAMQILNQQA*VDGPEVVHFQQ
Trigger: CTGTTGGAAGTGCACCACCTCAGGCCCATCCACCCAGGCCTGCTGATTCAAAATCTGCATTGCAGAGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
3UTR-3UTR CAA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGCCATCCATGGAGGAGTaGAAGTTTGTGGGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGPSMEE*KFVGGE
Trigger: CTCCCCTCCCACAAACTTCAACTCCTCCATGGATGG...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGCCATCCATGGAGGAGTaGAAGTTTGTGGGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: QLLAATWLITAVPVWGWEPSMEE*KFVGGE
Trigger: CTCCCCTCCCACAAACTTCAACTCCTCCATGGATGG...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAAGCTGGGCCGAGCTGTaGAGTGAAATGACCGAAGGC +
Preference number: 3 (lower is better)
Translates to: AEHPQLLAATWLITAVPVSWAEL*SEMTEG
Trigger: GCCTTCGGTCATTTCACTCAACAGCTCGGCCCAGCT...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp TGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCTCCTTGTCCAGGTCTaGCTCAGAGAAGGAGTCATT +
Preference number: 3 (lower is better)
Translates to: CRQLLSRTDSCWAAARAGLLVQV*LREGVI
Trigger: AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAG...CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR TCA 72 bp CCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGTaGAATGACCGAAGGCAGAGTTTGTATGTTCTCCCC +
Preference number: 3 (lower is better)
Translates to: PSQVSELGRAVE*NDRRQSLYVLP
Trigger: GGGGAGAACATACAAACTCTGCCTTCGGTCATTTCACTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR GCA 72 bp GGCCTGCATGATGCTGTATATATTCTTTGGGGCAAATaGAGGCTGGGCCATTTGGTATCCATCCTTCACCAG +
Preference number: 3 (lower is better)
Translates to: GLHDAVYILWGK*RLGHLVSILHQ
Trigger: CTGGTGAAGGATGGATACCAAATGGCCCAGCCTGCATTTGCCCCAAAGAATATATACAGCATCATGCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR CAA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACACCATCCATGGAGGAGTaGAAGTTTGTGGGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTPSMEE*KFVGGE
Trigger: CTCCCCTCCCACAAACTTCAACTCCTCCATGGATGG...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGACCGAAGGCAGAGTTaGTATGTTCTCCCCGTGTCG +
Preference number: 3 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKDRRQS*YVLPVS
Trigger: CGACACGGGGAGAACATACAAACTCTGCCTTCGGTC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGACCGAAGGCAGAGTTaGTATGTTCTCCCCGTGTCG +
Preference number: 3 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPDRRQS*YVLPVS
Trigger: CGACACGGGGAGAACATACAAACTCTGCCTTCGGTC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR-3UTR CAA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGTGCTGTATATATTCTTaGGGGCAAATGCAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGCCIYS*GQMQAG
Trigger: CCCAGCCTGCATTTGCCCCAAAGAATATATACAGCA...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
3UTR-3UTR CAA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAAGCTGGGCCGAGCTGTaGAGTGAAATGACCGAAGGC +
Preference number: 3 (lower is better)
Translates to: SISMKIRGLGKKVLLVGISWAEL*SEMTEG
Trigger: GCCTTCGGTCATTTCACTCAACAGCTCGGCCCAGCT...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR CCA 72 bp CAAAGAGCCTGGTTTTCTCAGTATCAGTGTAGCTCCTaGGGACTTCATAGGCATAAAGTCAGTCCATTTCCA +
Preference number: 3 (lower is better)
Translates to: QRAWFSQYQCSS*GLHRHKVSPFP
Trigger: TGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACTGAGAAAACCAGGCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
3UTR CCA 72 bp GAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTaGCATAGCAAACACGAGGCCAACACCATGAGAACA +
Preference number: 3 (lower is better)
Translates to: EDKGIRKEGSTS*HSKHEANTMRT
Trigger: TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGGCTGCAGCAAGGGCTaGGCGATATCCCCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSGCSKG*AISPCS
Trigger: CGAGCAAGGGGATATCGCCCAGCCCTTGCTGCAGCC...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGAGTTGGTGTGGCGCATaGGGGGCCGGCCACGCACAC +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVESWCGA*GAGHAH
Trigger: GTGTGCGTGGCCGGCCCCTCATGCGCCACACCAACT...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTGCAGAGATGGGTATaGAGGCCCAGGAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: VKQVPELQGPSILLVQVLLQRWV*RPRSHS
Trigger: GGAGTGGCTCCTGGGCCTTCATACCCATCTCTGCAG...CAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp GGCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTACTTGGCTGGAGAAGTaGAGCAGGTCCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GWRSEAGPGAPGAVHPPCTWLEK*SRSRSS
Trigger: GGAGCTCCGGGACCTGCTTCACTTCTCCAGCCAAGT...ACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR GCA 90 bp GAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTGCTTGCCCTGCACGTTaGTGGCCACGCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: EAGPGAPGAVHPPCPGLAACPAR*WPRRSS
Trigger: ACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGC...AGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAAAGCGAGGAAGGCCATaGCCTGGGCTACTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSKRGRP*PGLLGW
Trigger: CCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTT...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGGCCTCGGTGGGGAAGTaGCAGGCAGGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEASVGK*QAGAGL
Trigger: CAGCCCTGCACCTGCCTGCCACTTCCCCACCGAGGC...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGGAAGTGGGATCCTCTaGCCTCCCCTGAATCCCTCA +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSGSGIL*PPLNPS
Trigger: TGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCC...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAAATCCGCACCAGCTCTaGAGGCACCAGTGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSNPHQL*RHQCQG
Trigger: GCCTTGACACTGGTGCCTGCAGAGCTGGTGCGGATT...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGGCAGTGATGGCCCATaGTCAGGAAGTGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSGSDGP*SGSGIL
Trigger: GAGGATCCCACTTCCTGAGCATGGGCCATCACTGCC...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGCCTCCCTCGGGGTCCTaGCCGGGGCTCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGPPSGS*PGLRLG
Trigger: ACCCAGCCTGAGCCCCGGCCAGGACCCCGAGGGAGG...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR CCA 90 bp GCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCGCTGCCACGTCCCGGTaGATGCAATTCTTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: AGEVKQVPELQGPSILLVAATSR*MQFLEA
Trigger: CGCTTCCAAGAATTGCATCCACCGGGACGTGGCAGC...GACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGCTGCCACGTCCCGGTaGATGCAATTCTTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSAATSR*MQFLEA
Trigger: CGCTTCCAAGAATTGCATCCACCGGGACGTGGCAGC...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAAGATCTGCTGGAAGGTaGGTCTGTGGGTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSRSAGR*VCGWAP
Trigger: TGGAGCCCACCCACAGACCCACCTTCCAGCAGATCT...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGGGTGAGGCTGTGGAGTaGAGGCGGCGTATAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEGEAVE*RRRIGQ
Trigger: CTGCCCTATACGCCGCCTTCACTCCACAGCCTCACC...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGGTGGATGGCGGCGCTaGCTCCCAGGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGGGWRR*LPGGLQ
Trigger: CTGGAGACCCCCTGGGAGGCAGCGCCGCCATCCACC...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCATTGACGATGTTCTCGTaGTGGCCCAGGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSLTMFS*WPRWLM
Trigger: CATGAGCCACCTGGGCCAGCACGAGAACATCGTCAA...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR GCA 90 bp GTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGTTGACGATGTTCTCGTaGTGGCCCAGGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: VKQVPELQGPSILLVQVLLTMFS*WPRWLM
Trigger: CATGAGCCACCTGGGCCAGCACGAGAACATCGTCAA...CAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR GCA 90 bp GCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCGGAGTTTGTGCTTCCTaGTTGGTGTGGCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: AGEVKQVPELQGPSILLVGVCAS*LVWPAT
Trigger: TGTGGCTGGCCACACCAAGCAGGAAGCACAAACTCC...GACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp ATGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGGGCCCATGGCCTCGGTaGGGAAGTGGCAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: MQFLEARKAMPWATWLEKGPWPR*GSGRQV
Trigger: CACCTGCCTGCCACTTCCCCACCGAGGCCATGGGCC...CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp GCGATATCCCCTTGCTCGCAGCAGGTCAGGTGCTCACTAGAGCTCTCCTCCTCCGGCAGTAGTGCGTCCTaGTCCTCGAACACGACCACC +
Preference number: 4 (lower is better)
Translates to: AISPCSQQVRCSLELSSSGSSAS*SSNTTT
Trigger: GGTGGTCGTGTTCGAGGACCAGGACGCACTACTGCC...GGAGGAGGAGAGCTCTAGTGAGCACCTGACCTGCTGCGAGCAAGGGGATATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp GCGATATCCCCTTGCTCGCAGCAGGTCAGGTGCTCACTAGAGCTCTCCTCCTCCCATGTCACGTTGGGCTaGGGGTACCCAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AISPCSQQVRCSLELSSSHVTLG*GYPEAA
Trigger: TGCTGCCTCTGGGTACCCCCAGCCCAACGTGACATG...GGAGGAGGAGAGCTCTAGTGAGCACCTGACCTGCTGCGAGCAAGGGGATATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGTCCGGGGGATGCGTGTaGGCTCCTGCAGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVESGGCV*APAEMG
Trigger: ACCCATCTCTGCAGGAGCCCACACGCATCCCCCGGA...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTACGATGTTCTCGTGCTaGCCCAGGTGGCTCATGATC +
Preference number: 4 (lower is better)
Translates to: GWRSEAGPGAPGAVHPPCTMFSC*PRWLMI
Trigger: GATCATGAGCCACCTGGGCCAGCACGAGAACATCGT...ACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp GCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGAGAAGGAGTCATCATCAGCATGGGCCGTaGCTGCCACGCACACAGGTC +
Preference number: 4 (lower is better)
Translates to: APGAVHPPCPGLAQRRSHHQHGP*LPRTQV
Trigger: GACCTGTGTGCGTGGCAGCCACGGCCCATGCTGATG...ATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS-3UTR CCA 90 bp GTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCAAGAGATGCCTCCATaGGTACAGGCTCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VKQVPELQGPSILLVQVLQEMPP*VQAPRR
Trigger: CCTTCTGGGAGCCTGTACCCATGGAGGCATCTCTTG...CAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
3UTR CAA 72 bp GTTGTTGGGCTGCAGCAAGGGCTGGGCGATATCCCCTaGCTCGCAGCAGGTCAGGTGCTCACTAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VVGLQQGLGDIP*LAAGQVLTRAL
Trigger: GAGAGCTCTAGTGAGCACCTGACCTGCTGCGAGCAAGGGGATATCGCCCAGCCCTTGCTGCAGCCCAACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp GTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTGCCACCCAGCACCGGGTCTGTaGGCAGACAGGGCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: VPNLGHMTIGQQHVTRCHPAPGL*ADRAVV
Trigger: CACTACTGCCCTGTCTGCTCACAGACCCGGTGCTGG...GTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCACCAATCTTGGCCACATaGCCATTGGTCAACAGCACG +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSPILAT*PLVNST
Trigger: CGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGG...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR TCA 90 bp GTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCCAATCTTGGCCACATaGCCATTGGTCAACAGCACG +
Preference number: 4 (lower is better)
Translates to: VKQVPELQGPSILLVQVLPILAT*PLVNST
Trigger: CGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGG...CAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR TCA 90 bp GGCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTGGCGGGCATTGCCCTTaGCAATGTAGTTGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: GWRSEAGPGAPGAVHPPCGGHCP*QCSWSH
Trigger: ATGACTCCAACTACATTGTCAAGGGCAATGCCCGCC...ACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR GCA 90 bp GGCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTGAGAGGGTGAAGGTGTaGCTGTATGTGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GWRSEAGPGAPGAVHPPCERVKV*LYVSLV
Trigger: CACCAAGGACACATACAGGCACACCTTCACCCTCTC...ACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp CCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCCAGCACGTTACGCGCTaGCACGTCCCGGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: PEVPNLGHMTIGQQHVTRQHVTR*HVPVDA
Trigger: TGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTG...GCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGTGCCCTGCACGTTGCTaGCCACGCAGGAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVECPARC*PRRSSC
Trigger: GCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCA...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGAGCCTCCTGGGTTTCTaGCCAGGAAGGAGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVESLLGF*PGRSSG
Trigger: GCCGCTACTCCTTCCTGGCCAGAAACCCAGGAGGCT...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CGCTTCTGCTGCTGCTCGGCAGATTGGTATAGTCCCGCTCTCTCCTGTCCTCTTGCAGCCATGTCACGTTaGGCTGGGGGTACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RFCCCSADWYSPALSCPLAAMSR*AGGTQR
Trigger: CCTCTGGGTACCCCCAGCCCAACGTGACATGGCTGC...AAGAGGACAGGAGAGAGCGGGACTATACCAATCTGCCGAGCAGCAGCAGAAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCACAGACCTGCAGCACTTaGGCCTCATCACACCTATCA +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSQTCST*ASSHLS
Trigger: TGATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTG...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGGGCCGGGGCTCAGGCTaGGTCCCAGCATGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWEGRGSG*VPAWPQ
Trigger: CTGAGGCCATGCTGGGACCCAGCCTGAGCCCCGGCC...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCATGGCCACATGACCATTaGTCAACAGCACGTTACGCG +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSWPHDH*STARYA
Trigger: CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCA...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR TCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGAGTTGGTGTGGCGCATaGGGGGCCGGCCACGCACAC +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWESWCGA*GAGHAH
Trigger: GTGTGCGTGGCCGGCCCCTCATGCGCCACACCAACT...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTGCCACCGACCACCACTGGTGTaGAGAGGAACTCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: VPNLGHMTIGQQHVTRCHRPPLV*RGTHPG
Trigger: CCCCGGATGAGTTCCTCTTCACACCAGTGGTGGTCG...GTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp GCCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGACTTGGCTGGAGAAGTaGAGCAGGTCCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ARSPQSWPHDHWSTARYATWLEK*SRSRSS
Trigger: GGAGCTCCGGGACCTGCTTCACTTCTCCAGCCAAGT...CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR TCA 90 bp CGCTTCTGCTGCTGCTCGGCAGATTGGTATAGTCCCGCTCTCTCCTGTCCTCTTCCAAGGGGCCTGAGCTaGGTGTGGTCTGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: RFCCCSADWYSPALSCPLPRGLS*VWSVSI
Trigger: GATGCTCACAGACCACACTCAGCTCAGGCCCCTTGG...AAGAGGACAGGAGAGAGCGGGACTATACCAATCTGCCGAGCAGCAGCAGAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTGGTGAGGCTGTGGAGTaGAGGCGGCGTATAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSGEAVE*RRRIGQ
Trigger: CTGCCCTATACGCCGCCTTCACTCCACAGCCTCACC...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp GCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGAGAAGGAGTCATCCTTCTAGCCCAGAATaGCGGGACTGGGCAGAACAC +
Preference number: 4 (lower is better)
Translates to: APGAVHPPCPGLAQRRSHPSSPE*RDWAEH
Trigger: GTGTTCTGCCCAGTCCCGTCATTCTGGGCTAGAAGG...ATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp GTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTGCCACTGGAGGTGGAGTGCTTaGCCTGCACGTTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VPNLGHMTIGQQHVTRCHWRWSA*PARCWP
Trigger: TGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCA...GTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp CCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCGGACAGCATCCTCCTTaGCCAGACCAAAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PEVPNLGHMTIGQQHVTRGQHPP*PDQRPW
Trigger: CCACGGCCTTTGGTCTGGGCAAGGAGGATGCTGTCC...GCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp TGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCAGCACGTTACGCGCTaGCACGTCCCGGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: CRQLLSRTDSCWAAARAGQHVTR*HVPVDA
Trigger: TGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTG...CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp CCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTGGGCGATATCCCCTTaGTCGCAGCAGGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PEVPNLGHMTIGQQHVTRWAISP*SQQVRC
Trigger: GCACCTGACCTGCTGCGAGCAAGGGGATATCGCCCA...GCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp GAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTGAGGGATTGCGAGCTTaGTGTTGTTGTGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EAGPGAPGAVHPPCPGLAEGLRA*CCCVGG
Trigger: TCCTCCAACACAACAACACCAAGCTCGCAATCCCTC...AGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTCCGGGGGATGCGTGTaGGCTCCTGCAGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSSGGCV*APAEMG
Trigger: ACCCATCTCTGCAGGAGCCCACACGCATCCCCCGGA...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTTCCGGGGGATGCGTGTaGGCTCCTGCAGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSSGGCV*APAEMG
Trigger: ACCCATCTCTGCAGGAGCCCACACGCATCCCCCGGA...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp GAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTATCTTCCAGCGGACCTaGTACTTGGGCTTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: EAGPGAPGAVHPPCPGLAIFQRT*YLGFCL
Trigger: TAAGCAGAAGCCCAAGTACCAGGTCCGCTGGAAGAT...AGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTAGGCCGGGGCTCAGGCTaGGTCCCAGCATGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSASLSSPKEPGFLSISVGRGSG*VPAWPQ
Trigger: CTGAGGCCATGCTGGGACCCAGCCTGAGCCCCGGCC...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCACGAAGTCCCCAATCTTaGCCACATGACCATTGGTCA +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSRSPQS*PHDHWS
Trigger: TGACCAATGGTCATGTGGCCAAGATTGGGGACTTCG...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp CTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGAGAAGGAGTCATTTCCTTCTCATCAGCATaGGCCGTGGCTGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: LQGPSILLVQVLLREGVISFSSA*AVAATH
Trigger: GTGCGTGGCAGCCACGGCCCATGCTGATGAGAAGGA...AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS-3UTR CCA 90 bp CCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTGTCCACACCCTGGCTaGAGAAGCCACTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: PEVPNLGHMTIGQQHVTRCPHPG*RSHCPL
Trigger: CAGCGGACAGTGGCTTCTCCAGCCAGGGTGTGGACA...GCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS-3UTR TCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTCCAGCACCGGGTCTGTaGGCAGACAGGGCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAPAPGL*ADRAVV
Trigger: CACTACTGCCCTGTCTGCTCACAGACCCGGTGCTGG...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGAGTCCTGGCTCTGAATaGACTTGGCCCTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVESPGSE*TWPCGW
Trigger: CCATCCACAGGGCCAAGTTCATTCAGAGCCAGGACT...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CGCTTCTGCTGCTGCTCGGCAGATTGGTATAGTCCCGCTCTCTCCTGTCCTCTTGGGGGTATCGAAGGGTaGGCTCAAACGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RFCCCSADWYSPALSCPLGGIEG*AQTSEL
Trigger: GAGCTCTGACGTTTGAGCTCACCCTTCGATACCCCC...AAGAGGACAGGAGAGAGCGGGACTATACCAATCTGCCGAGCAGCAGCAGAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGTCTTCAGCTCGGACATaGGGGCCTCCTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVESSART*GPPSHQ
Trigger: CTGATGAGAAGGAGGCCCTCATGTCCGAGCTGAAGA...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTACTTGGCTGGAGAAGTaGAGCAGGTCCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSTWLEK*SRSRSS
Trigger: GGAGCTCCGGGACCTGCTTCACTTCTCCAGCCAAGT...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGAGAAGGAGTCATGGGATTCAGCCCAAGTaGGAAGATCTCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: APGAVHPPCPGLAQRRSHGIQPK*EDLPEE
Trigger: CTCCTCTGGGAGATCTTCTCACTTGGGCTGAATCCC...ATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGTGGATGGCGGCGCTaGCTCCCAGGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMGGWRR*LPGGLQ
Trigger: CTGGAGACCCCCTGGGAGGCAGCGCCGCCATCCACC...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTGTGTGGCCACTGCACTaGAGCCATGTCACGTTGGGC +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSVWPLH*SHVTLG
Trigger: GCCCAACGTGACATGGCTGCAGTGCAGTGGCCACAC...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGTTGACGATGTTCTCGTaGTGGCCCAGGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVELTMFS*WPRWLM
Trigger: CATGAGCCACCTGGGCCAGCACGAGAACATCGTCAA...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTACAGCACGTTACGCGCTaGCACGTCCCGGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLQHVTR*HVPVDA
Trigger: TGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTG...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGATGCTGCTGCTGCCGCTaGCACCGCTTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGCCCCR*HRFCCC
Trigger: GCAGCAGCAGAAGCGGTGGCAGCGGCAGCAGCAGCA...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CTCCAAGGCCCAGCAGGCCTGCATGATGCTGTATATATTCTTTGGGGCAAATGCGCTCACTGCTGCTGCTaGCGCTGCCACCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LQGPAGLHDAVYILWGKCAHCCC*RCHRFC
Trigger: GCAGAAGCGGTGGCAGCGGCAGCAGCAGCAGTGAGC...GCATTTGCCCCAAAGAATATATACAGCATCATGCAGGCCTGCTGGGCCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGCCTCGGTGGGGAAGTaGCAGGCAGGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGASVGK*QAGAGL
Trigger: CAGCCCTGCACCTGCCTGCCACTTCCCCACCGAGGC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCGATATCCCCTTGGGTCACCGTTGCTCCTaGCTTCACGACCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SAELIVVGLQQGLGDIPLGHRCS*LHDQLR
Trigger: CCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACC...CAAGGGGATATCGCCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTGCCCTGCACGTTGCTaGCCACGCAGGAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSCPARC*PRRSSC
Trigger: GCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCA...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGGGAAGAACATGGAGGTaGAGTGCTTGCCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEGRTWR*SACPAR
Trigger: ACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCC...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAAGCGGACCTGGTACTTaGGCTTCTGCTTATACTTGT +
Preference number: 4 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSSGPGT*ASAYTC
Trigger: ACAAGTATAAGCAGAAGCCCAAGTACCAGGTCCGCT...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp TCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCGATATCCCCTTGCCAGACCAAAGGCCGTaGCCTCCACCACCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SAELIVVGLQQGLGDIPLPDQRP*PPPPSQ
Trigger: TTGGGAAGGTGGTGGAGGCCACGGCCTTTGGTCTGG...CAAGGGGATATCGCCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp CCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCAGGAAGGCCATGCCCTaGGCTACTTGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PEVPNLGHMTIGQQHVTRRKAMP*ATWLEK
Trigger: CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCT...GCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp GCCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGGGTCCCTTAAGTCCCTaGGCACCAAAGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ARSPQSWPHDHWSTARYAGPLSP*APKGLC
Trigger: ACAGAGGCCCTTTGGTGCCCAGGGACTTAAGGGACC...CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS-3UTR TCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGCCGGGCAGGGTCTTTaGCATAGAGGTGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGAGQGL*HRGGWR
Trigger: CCGCCATCCACCTCTATGTCAAAGACCCTGCCCGGC...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp TGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCGGTCACCTCCTGGATaGGGTTCTGCTCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: CRQLLSRTDSCWAAARAGRSPPG*GSAQSS
Trigger: TGAGCTCTGAGCAGAACCTCATCCAGGAGGTGACCG...CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGCCAATCTTGGCCACATaGCCATTGGTCAACAGCACG +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEPILAT*PLVNST
Trigger: CGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGG...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTCCTCTGACCTCCCCTaGATCCCTCACCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSSSDLP*IPHLPK
Trigger: CTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGA...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTCCAAGGGGCCTGAGCTaGGTGTGGTCTGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAPRGLS*VWSVSI
Trigger: GATGCTCACAGACCACACTCAGCTCAGGCCCCTTGG...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AAGTTTGTGGGAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTGGTCTCCAGGCTCAGTaGAGCGATAGGTCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: KFVGGESGTPCRQLLSRTGLQAQ*SDRSPC
Trigger: ACACGGGGACCTATCGCTGCACTGAGCCTGGAGACC...AGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTCCCACAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGCACCAGCGAGACGCCTaGTTCCAGCACCGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGHQRDA*FQHRVC
Trigger: ACAGACCCGGTGCTGGAAGCAGGCGTCTCGCTGGTG...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAGCTTGCCCTGCACGTTaGTGGCCACGCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLACPAR*WPRRSS
Trigger: ACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGC...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGAGGTGGAGTGCTTaGCCTGCACGTTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGWRWSA*PARCWP
Trigger: TGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCA...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGAACTCATCCGGGGGATaGGTGTGGGCTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGNSSGG*VWAPAE
Trigger: CTCTGCAGGAGCCCACACGCATCCCCCGGATGAGTT...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGAGGGTCTTACCAAACTaGAGGTTGTTCCGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVERVLPN*RLFRGN
Trigger: GTTCCCCCGGAACAACCTGCAGTTTGGTAAGACCCT...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCTCCTTGTCCAGGTCTTaGTCAGAGAAGGAGTCATTT +
Preference number: 4 (lower is better)
Translates to: AGEVKQVPELQGPSILLVSLSRS*SEKESF
Trigger: AAATGACTCCTTCTCTGAGCAAGACCTGGACAAGGA...GACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR GCA 90 bp CCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTTTAGAGGAGCCATCCTaGTCCAAGGGGCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PCRQLLSRTDSCWAAARALEEPS*SKGPEL
Trigger: CAGCTCAGGCCCCTTGGAGCAGGATGGCTCCTCTAA...AGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGACCATGCCAAGCTGTaGCCACCAGCAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRADHAKL*PPAGAA
Trigger: TGCTGCTCCTGCTGGTGGCCACAGCTTGGCATGGTC...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGACCATGCCAAGCTGTaGCCACCAGCAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGDHAKL*PPAGAA
Trigger: TGCTGCTCCTGCTGGTGGCCACAGCTTGGCATGGTC...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGGACCATGCCAAGCTGTaGCCACCAGCAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGDHAKL*PPAGAA
Trigger: TGCTGCTCCTGCTGGTGGCCACAGCTTGGCATGGTC...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGTCACCGTTGCTCCTaGCTTCACGACCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAGHRCS*LHDQLR
Trigger: CCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACC...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTCCCACGGTCACCTCCTaGATGAGGTTCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PCRQLLSRTDSCWAAARAPTVTS*MRFCSE
Trigger: CTCTGAGCAGAACCTCATCCAGGAGGTGACCGTGGG...AGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTGGGCTCAGGCTGGTaGTCAGAAAAGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSLGSGW*SEKGPR
Trigger: CCTGGGACCCTTTTCTGACCACCAGCCTGAGCCCAA...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTTGGGCTCAGGCTGGTaGTCAGAAAAGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: MQFLEARKAMPWATWLEKLGSGW*SEKGPR
Trigger: CCTGGGACCCTTTTCTGACCACCAGCCTGAGCCCAA...CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAAGCCTCCTGGGTTTCTaGCCAGGAAGGAGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLSLLGF*PGRSSG
Trigger: GCCGCTACTCCTTCCTGGCCAGAAACCCAGGAGGCT...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGGCTGGGTCCCAGCATaGCCTCAGCCTTCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGGWVPA*PQPSFA
Trigger: TGCGAAGGAAGGCTGAGGCCATGCTGGGACCCAGCC...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR CCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACACCTCCCTCGGGGTCCTaGCCGGGGCTCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTPPSGS*PGLRLG
Trigger: ACCCAGCCTGAGCCCCGGCCAGGACCCCGAGGGAGG...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR CCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGTGGCCACATGACCATTaGTCAACAGCACGTTACGCG +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEWPHDH*STARYA
Trigger: CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCA...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTCCCATGCTCAGGAAGTaGGATCCTCTGACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSPMLRK*DPLTSP
Trigger: AGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGG...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTTTGAATCAGCAGGCCTaGGTGGATGGGCCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSLNQQA*VDGPEV
Trigger: CACCTCAGGCCCATCCACCCAGGCCTGCTGATTCAA...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS-3UTR TCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAGCCGGGCAGGGTCTTTaGCATAGAGGTGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVAGQGL*HRGGWR
Trigger: CCGCCATCCACCTCTATGTCAAAGACCCTGCCCGGC...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGCCGGGCAGGGTCTTTaGCATAGAGGTGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGAGQGL*HRGGWR
Trigger: CCGCCATCCACCTCTATGTCAAAGACCCTGCCCGGC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAGGGGGTATCGAAGGGTaGGCTCAAACGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLGGIEG*AQTSEL
Trigger: GAGCTCTGACGTTTGAGCTCACCCTTCGATACCCCC...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGCTGCAGAGATGGGTATaGAGGCCCAGGAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWELQRWV*RPRSHS
Trigger: GGAGTGGCTCCTGGGCCTTCATACCCATCTCTGCAG...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGACGACCACCACTGGTGTaGAGAGGAACTCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGRPPLV*RGTHPG
Trigger: CCCCGGATGAGTTCCTCTTCACACCAGTGGTGGTCG...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GCTGGAGAAGCCACTGTCCGCTGCAACTCATGTGCAGATAAATCACCCCGGGAATCTTCAGCTCGGACATaGGGGCCTCCTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: AGEATVRCNSCADKSPRESSART*GPPSHQ
Trigger: CTGATGAGAAGGAGGCCCTCATGTCCGAGCTGAAGA...TTCCCGGGGTGATTTATCTGCACATGAGTTGCAGCGGACAGTGGCTTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS-3UTR TCA 90 bp AATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTGAAAGGCTCCCAGAAGGTTaGCGATGTTCTCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NSWKRGRPCPGLLGWRSERLPEG*RCSRAG
Trigger: GCCAGCACGAGAACATCGTCAACCTTCTGGGAGCCT...TTCACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR TCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAGCTGAGTGTGGTCTGTaGGCATCTGCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLAECGL*ASAAPL
Trigger: GAGAGGAGCAGCAGATGCTCACAGACCACACTCAGC...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AAGTTTGTGGGAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTTCGCAAGGTCACCGTTaGTCCTGGCTTCACGACCAG +
Preference number: 4 (lower is better)
Translates to: KFVGGESGTPCRQLLSRTSQGHR*SWLHDQ
Trigger: CTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGA...AGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTCCCACAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp ATGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGCATCCCATTCCACGCTaGCATTGCCCACACATCGCA +
Preference number: 4 (lower is better)
Translates to: MQFLEARKAMPWATWLEKHPIPR*HCPHIA
Trigger: TGCGATGTGTGGGCAATGGCAGCGTGGAATGGGATG...CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTTGGACATCACCTTCCTaGCACCCATCAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAWTSPS*HPSGHC
Trigger: GCAGTGCCCTGATGGGTGGCAGGAAGGTGATGTCCA...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGACATCACCTTCCTaGCACCCATCAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGWTSPS*HPSGHC
Trigger: GCAGTGCCCTGATGGGTGGCAGGAAGGTGATGTCCA...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAAATCCGCACCAGCTCTaGAGGCACCAGTGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLNPHQL*RHQCQG
Trigger: GCCTTGACACTGGTGCCTGCAGAGCTGGTGCGGATT...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGGGGTCATCCCAGACCTaGAGCACTTGGGCCTCATCA +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGGSSQT*STWASS
Trigger: TGATGAGGCCCAAGTGCTGCAGGTCTGGGATGACCC...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTACAGTCAGCAGGCTCTaGACCGTCACCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSTVSRL*TVTLWK
Trigger: CTTCCACAAGGTGACGGTGCAGAGCCTGCTGACTGT...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp CTCCAAGGCCCAGCAGGCCTGCATGATGCTGTATATATTCTTTGGGGCAAATGCAACTCATCCGGGGGATaGGTGTGGGCTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LQGPAGLHDAVYILWGKCNSSGG*VWAPAE
Trigger: CTCTGCAGGAGCCCACACGCATCCCCCGGATGAGTT...GCATTTGCCCCAAAGAATATATACAGCATCATGCAGGCCTGCTGGGCCTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGGGACAGCATCCTCCTTaGCCAGACCAAAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWEGQHPP*PDQRPW
Trigger: CCACGGCCTTTGGTCTGGGCAAGGAGGATGCTGTCC...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGAGACACAGTCAAAGATaGTCTCTGGGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: PPLNPSPSQVSELGRAVERHSQR*SLGPST
Trigger: AGTGGATGGCCCCAGAGAGCATCTTTGACTGTGTCT...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGTGCCACCGCTTCTGCTaGTGCTCGGCAGATTGGTAT +
Preference number: 4 (lower is better)
Translates to: CRQLLSRTDSCWAAARAGCHRFC*CSADWY
Trigger: ATACCAATCTGCCGAGCAGCAGCAGAAGCGGTGGCA...CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGTCGCAGCAGGTCAGGTaGTCACTAGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGSQQVR*SLELSS
Trigger: GGAGGAGAGCTCTAGTGAGCACCTGACCTGCTGCGA...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGGGCAGTGATGGCCCATaGTCAGGAAGTGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGGSDGP*SGSGIL
Trigger: GAGGATCCCACTTCCTGAGCATGGGCCATCACTGCC...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGTGTGGCCAGCCACATaGCAAGGTCCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGVWPAT*QGPLPS
Trigger: AGAAGGCAGGGGACCTTGGCATGTGGCTGGCCACAC...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGTGTGGCCAGCCACATaGCAAGGTCCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: EGRVVLPVVNSSAELIVVVWPAT*QGPLPS
Trigger: AGAAGGCAGGGGACCTTGGCATGTGGCTGGCCACAC...AACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTACTTCCCCTTTTAGCCTaGCCGCAGTTCCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLLPLLA*PQFPPL
Trigger: AAGCGGAGGGAACTGCGGCCAGGCTAAAAGGGGAAG...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286301.7
CDS-3UTR CCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGCAGTAGTGCGTCCTaGTCCTCGAACACGACCACC +
Preference number: 4 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGGSSAS*SSNTTT
Trigger: GGTGGTCGTGTTCGAGGACCAGGACGCACTACTGCC...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTCAAGGCTGGGGGCCCTaGGATGACTTTCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: PCRQLLSRTDSCWAAARAQGWGP*DDFLHF
Trigger: AAAGTGCAGAAAGTCATCCCAGGGCCCCCAGCCTTG...AGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp CCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGAAGAACATGGAGGTaGAGTGCTTGCCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: PCRQLLSRTDSCWAAARAGRTWR*SACPAR
Trigger: ACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCC...AGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAAGCTCTCCAGCCTCCTaGGTTTCTGGCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLSSPAS*VSGQEG
Trigger: TCCTTCCTGGCCAGAAACCCAGGAGGCTGGAGAGCT...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGAGTACAGGGCCTCCATaGGTACAGGCTCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGSTGPP*VQAPRR
Trigger: CCTTCTGGGAGCCTGTACCCATGGAGGCCCTGTACT...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR CCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTAGTACAGGGCCTCCATaGGTACAGGCTCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRASTGPP*VQAPRR
Trigger: CCTTCTGGGAGCCTGTACCCATGGAGGCCCTGTACT...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR CCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGGCTGGGTCCCAGCATaGCCTCAGCCTTCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGGWVPA*PQPSFA
Trigger: TGCGAAGGAAGGCTGAGGCCATGCTGGGACCCAGCC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR CCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGAGGAAGGCCATGCCCTaGGCTACTTGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGRKAMP*ATWLEK
Trigger: CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCT...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCGGTGGATGCAATTCTTaGAAGCGAGGAAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: PEVPNLGHMTIGQQHVTRGGCNS*KRGRPC
Trigger: GCATGGCCTTCCTCGCTTCCAAGAATTGCATCCACC...GCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGAGATCTGCTGGAAGGTaGGTCTGTGGGTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGRSAGR*VCGWAP
Trigger: TGGAGCCCACCCACAGACCCACCTTCCAGCAGATCT...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAGGCTGCAGCAAGGGCTaGGCGATATCCCCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVGCSKG*AISPCS
Trigger: CGAGCAAGGGGATATCGCCCAGCCCTTGCTGCAGCC...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTGTGGGAGGGGAGAGTaGTACTCCCTGTCGTCAACT +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSCGRGE*YSLSST
Trigger: AGTTGACGACAGGGAGTACCACTCTCCCCTCCCACA...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATAGTTGGTGTGGCGCATaGGGGGCCGGCCACGCACAC +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHSWCGA*GAGHAH
Trigger: GTGTGCGTGGCCGGCCCCTCATGCGCCACACCAACT...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAGCAGCAGCAAGGCCATaGTGGACATGCAGGCGACCA +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVAAARP*WTCRRP
Trigger: TGGTCGCCTGCATGTCCATCATGGCCTTGCTGCTGC...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTGAACCTCATAGCTCTCGATaGTCTTCCAGCGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: NSWKRGRPCPGLLGWRSEPHSSR*SSSGPG
Trigger: ACCAGGTCCGCTGGAAGATCATCGAGAGCTATGAGG...TTCACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGTCTTCAGCTCGGACATaGGGGCCTCCTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGSSART*GPPSHQ
Trigger: CTGATGAGAAGGAGGCCCTCATGTCCGAGCTGAAGA...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGCATCCCATTCCACGCTaGCATTGCCCACACATCGCA +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGHPIPR*HCPHIA
Trigger: TGCGATGTGTGGGCAATGGCAGCGTGGAATGGGATG...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTCACCCATCAGGGCACTaGATTGATAGTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSHPSGH*IDSPGS
Trigger: AGAGCCAGGACTATCAATGCAGTGCCCTGATGGGTG...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp ATGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGCCTGGGATGACTTTCTaGACTTTCAGCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: MQFLEARKAMPWATWLEKPGMTF*TFSRML
Trigger: CAGCATCCGGCTGAAAGTGCAGAAAGTCATCCCAGG...CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAGCTTGCCCTGCACGTTaGTGGCCACGCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVACPAR*WPRRSS
Trigger: ACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGC...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGTGGAGTGCTTGCCCTaGACGTTGCTGGCCACGCAG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMVECLP*TLLATQ
Trigger: CTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCAC...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTTATCAGTGTGGCCACTaGACTGCAGCCATGTCACGT +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSYQCGH*TAAMSR
Trigger: ACGTGACATGGCTGCAGTGCAGTGGCCACACTGATA...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTATCAGTGTGGCCACTaGACTGCAGCCATGTCACGT +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSYQCGH*TAAMSR
Trigger: ACGTGACATGGCTGCAGTGCAGTGGCCACACTGATA...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGGGTCATCCCAGACCTaGAGCACTTGGGCCTCATCA +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGGSSQT*STWASS
Trigger: TGATGAGGCCCAAGTGCTGCAGGTCTGGGATGACCC...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGAACTCATCCGGGGGATaGGTGTGGGCTCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGNSSGG*VWAPAE
Trigger: CTCTGCAGGAGCCCACACGCATCCCCCGGATGAGTT...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTTGGTACTTGGGCTTCTaGTTATACTTGTACAATAGC +
Preference number: 4 (lower is better)
Translates to: EAGPGAPGAVHPPCPGLAWYLGF*LYLYNS
Trigger: GCTATTGTACAAGTATAAGCAGAAGCCCAAGTACCA...AGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAAAGCGAGGAAGGCCATaGCCTGGGCTACTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVKRGRP*PGLLGW
Trigger: CCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTT...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGAGAAGGAGTCATTAGACACAGTCAAAGATaGTCTCTGGGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: LQGPSILLVQVLLREGVIRHSQR*SLGPST
Trigger: AGTGGATGGCCCCAGAGAGCATCTTTGACTGTGTCT...AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR GCA 90 bp AAGTTTGTGGGAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTAGGAAGGAGCAGATCTaGTGGAAGGTGGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: KFVGGESGTPCRQLLSRTRKEQI*WKVGLW
Trigger: CCACAGACCCACCTTCCAGCAGATCTGCTCCTTCCT...AGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTCCCACAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTTGCCACCGCTTCTGCTaGTGCTCGGCAGATTGGTAT +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRACHRFC*CSADWY
Trigger: ATACCAATCTGCCGAGCAGCAGCAGAAGCGGTGGCA...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGTCGCAGCAGGTCAGGTaGTCACTAGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGSQQVR*SLELSS
Trigger: GGAGGAGAGCTCTAGTGAGCACCTGACCTGCTGCGA...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGTCGCAGCAGGTCAGGTaGTCACTAGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWESQQVR*SLELSS
Trigger: GGAGGAGAGCTCTAGTGAGCACCTGACCTGCTGCGA...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGCATGCCAAGGTCCCCTaGCTTCTAGCCCAGAATGAC +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGHAKVP*LLAQND
Trigger: GTCATTCTGGGCTAGAAGGCAGGGGACCTTGGCATG...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGCAGGGATCGGGACACTaGACACACGTTCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWEQGSGH*THVPLL
Trigger: GAGGAGAGGAACGTGTGTCCAGTGTCCCGATCCCTG...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGCCTCGGTGGGGAAGTaGCAGGCAGGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKASVGK*QAGAGL
Trigger: CAGCCCTGCACCTGCCTGCCACTTCCCCACCGAGGC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGGCCCATGGCCTCGGTaGGGAAGTGGCAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPGPWPR*GSGRQV
Trigger: CACCTGCCTGCCACTTCCCCACCGAGGCCATGGGCC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGCCAGCTCAGGGACACTaGGCTCTATCACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGPAQGH*ALSLGF
Trigger: GAATCCCAGTGATAGAGCCCAGTGTCCCTGAGCTGG...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGGCAGTAGTGCGTCCTaGTCCTCGAACACGACCACC +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGGSSAS*SSNTTT
Trigger: GGTGGTCGTGTTCGAGGACCAGGACGCACTACTGCC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGGAAGAACATGGAGGTaGAGTGCTTGCCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGGRTWR*SACPAR
Trigger: ACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCC...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGACCCACGGTCACCTCCTaGATGAGGTTCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGPTVTS*MRFCSE
Trigger: CTCTGAGCAGAACCTCATCCAGGAGGTGACCGTGGG...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTATGACGCTTACCTCTaGGGGGTATCGAAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSYDAYL*GVSKGE
Trigger: CTCACCCTTCGATACCCCCCAGAGGTAAGCGTCATA...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGCAGCCATGTCACGTTaGGCTGGGGGTACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMAAMSR*AGGTQR
Trigger: CCTCTGGGTACCCCCAGCCCAACGTGACATGGCTGC...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTCACACCTATCAGTGTaGCCACTGCACTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: MQFLEARKAMPWATWLEKSHLSV*PLHCSH
Trigger: ATGGCTGCAGTGCAGTGGCCACACTGATAGGTGTGA...CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGCAGGACCTCAGGGTATaGGTCATCCCAGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWEQDLRV*VIPDLQ
Trigger: CTGCAGGTCTGGGATGACCCATACCCTGAGGTCCTG...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGGCAGGCGACCACCACTaGTGTGAAGAGGAACTCATC +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGAGDHH*CEEELI
Trigger: GATGAGTTCCTCTTCACACCAGTGGTGGTCGCCTGC...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCATCAGCATGGGCCGTaGACTTCAGCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: CRQLLSRTDSCWAAARAGHQHGP*TSASSQ
Trigger: CTGTGAAGATGCTGAAGTCCACGGCCCATGCTGATG...CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp GAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTAGGAAGGCCATGCCCTaGGCTACTTGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EGRVVLPVVNSSAELIVVRKAMP*ATWLEK
Trigger: CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCT...AACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTGGTGGATGCAATTCTTaGAAGCGAGGAAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSGGCNS*KRGRPC
Trigger: GCATGGCCTTCCTCGCTTCCAAGAATTGCATCCACC...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGGCTGCCACGTCCCGGTaGATGCAATTCTTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWEAATSR*MQFLEA
Trigger: CGCTTCCAAGAATTGCATCCACCGGGACGTGGCAGC...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTTGGCCACATGACCATTaGTCAACAGCACGTTACGCG +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSWPHDH*STARYA
Trigger: CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCA...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CCA 90 bp AATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTGAAGGGGCAAATGCAGGCTaGGCCATTTGGTATCCATCC +
Preference number: 4 (lower is better)
Translates to: NSWKRGRPCPGLLGWRSEGANAG*AIWYPS
Trigger: GGATGGATACCAAATGGCCCAGCCTGCATTTGCCCC...TTCACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp GAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGCTTCCTGCTTGGTGTaGCCAGCCACATGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: EGRVVLPVVNSSAELIVVASCLV*PATCQG
Trigger: ACCTTGGCATGTGGCTGGCCACACCAAGCAGGAAGC...AACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGCGACCACCACTGGTGTaGAGAGGAACTCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMRPPLV*RGTHPG
Trigger: CCCCGGATGAGTTCCTCTTCACACCAGTGGTGGTCG...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGACCTCATAGCTCTCGATaGTCTTCCAGCGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGPHSSR*SSSGPG
Trigger: ACCAGGTCCGCTGGAAGATCATCGAGAGCTATGAGG...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGCTGCGTGGGGTCGATaGAAGTATAACTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGAAWGR*KYNCCP
Trigger: AGGGCAACAGTTATACTTTCATCGACCCCACGCAGC...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTATCCTTCGCAGAAAGTTaGGCAGGTCGCCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLSFAES*AGRHSN
Trigger: GTTGCTATGGCGACCTGCTCAACTTTCTGCGAAGGA...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR TCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGCGGGCATTGCCCTTaGCAATGTAGTTGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAGGHCP*QCSWSH
Trigger: ATGACTCCAACTACATTGTCAAGGGCAATGCCCGCC...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGGATTCAGCCCAAGTaGGAAGATCTCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGGIQPK*EDLPEE
Trigger: CTCCTCTGGGAGATCTTCTCACTTGGGCTGAATCCC...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGGAAGTGGGATCCTCTaGCCTCCCCTGAATCCCTCA +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGGSGIL*PPLNPS
Trigger: TGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTAGCTGAGTGTGGTCTGTaGGCATCTGCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LSASLSSPKEPGFLSISVAECGL*ASAAPL
Trigger: GAGAGGAGCAGCAGATGCTCACAGACCACACTCAGC...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGCACCCATCAGGGCACTaGATTGATAGTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGHPSGH*IDSPGS
Trigger: AGAGCCAGGACTATCAATGCAGTGCCCTGATGGGTG...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACAGTGGAGTGCTTGCCCTaGACGTTGCTGGCCACGCAG +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTVECLP*TLLATQ
Trigger: CTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCAC...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAAACATGGAGGTGGAGTaGTTGCCCTGCACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGNMEVE*LPCTLL
Trigger: CAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTT...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTAGGGTCTTACCAAACTaGAGGTTGTTCCGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRARVLPN*RLFRGN
Trigger: GTTCCCCCGGAACAACCTGCAGTTTGGTAAGACCCT...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGATGCTGTTCACCAGGATaGCAGGGTAGGGATTCAGCC +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGCCSPG*QGRDSA
Trigger: GGCTGAATCCCTACCCTGGCATCCTGGTGAACAGCA...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGTGCCACCGCTTCTGCTaGTGCTCGGCAGATTGGTAT +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWECHRFC*CSADWY
Trigger: ATACCAATCTGCCGAGCAGCAGCAGAAGCGGTGGCA...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATTGCTGCTGCTGCCGCTaGCACCGCTTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHCCCCR*HRFCCC
Trigger: GCAGCAGCAGAAGCGGTGGCAGCGGCAGCAGCAGCA...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGCTCACTGCTGCTGCTaGCGCTGCCACCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKAHCCC*RCHRFC
Trigger: GCAGAAGCGGTGGCAGCGGCAGCAGCAGCAGTGAGC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGGCAGTGATGGCCCATaGTCAGGAAGTGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGGSDGP*SGSGIL
Trigger: GAGGATCCCACTTCCTGAGCATGGGCCATCACTGCC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGTCTGTGAGCATCTGCTaGTCCTCTCAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGSVSIC*SSQRGR
Trigger: TCTCCCTCTCTGAGAGGAGCAGCAGATGCTCACAGA...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTTCTGTGAGCATCTGCTaGTCCTCTCAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRASVSIC*SSQRGR
Trigger: TCTCCCTCTCTGAGAGGAGCAGCAGATGCTCACAGA...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGTTAGAGGAGCCATCCTaGTCCAAGGGGCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGLEEPS*SKGPEL
Trigger: CAGCTCAGGCCCCTTGGAGCAGGATGGCTCCTCTAA...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCCCCCAACTTTTAGCTaGCACTTGGCTCATTACAGC +
Preference number: 4 (lower is better)
Translates to: CRQLLSRTDSCWAAARAGPPTFS*HLAHYS
Trigger: GCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGG...CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGAGGAGTTGACGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGACATGCCAAGGTCCCCTaGCTTCTAGCCCAGAATGAC +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGHAKVP*LLAQND
Trigger: GTCATTCTGGGCTAGAAGGCAGGGGACCTTGGCATG...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGTGTGGCCAGCCACATaGCAAGGTCCCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMVWPAT*QGPLPS
Trigger: AGAAGGCAGGGGACCTTGGCATGTGGCTGGCCACAC...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGGTGCTCTCACGCTTTTaGACACTCTGTCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGVLSRF*TLCLPF
Trigger: GAAGGGCAGACAGAGTGTCCAAAAGCGTGAGAGCAC...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286301.7
CDS-3UTR CCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCGGCCCATGGCCTCGGTaGGGAAGTGGCAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGGPWPR*GSGRQV
Trigger: CACCTGCCTGCCACTTCCCCACCGAGGCCATGGGCC...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGCATGTCACGTTGGGCTaGGGGTACCCAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMHVTLG*GYPEAA
Trigger: TGCTGCCTCTGGGTACCCCCAGCCCAACGTGACATG...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTACAGACCTGCAGCACTTaGGCCTCATCACACCTATCA +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLQTCST*ASSHLS
Trigger: TGATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTG...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTCAGACCTGCAGCACTTaGGCCTCATCACACCTATCA +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAQTCST*ASSHLS
Trigger: TGATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTG...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGCAGGCGACCACCACTaGTGTGAAGAGGAACTCATC +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGAGDHH*CEEELI
Trigger: GATGAGTTCCTCTTCACACCAGTGGTGGTCGCCTGC...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTACATCAGCATGGGCCGTaGACTTCAGCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLHQHGP*TSASSQ
Trigger: CTGTGAAGATGCTGAAGTCCACGGCCCATGCTGATG...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTATCCTTCTCATCAGCATaGGCCGTGGACTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLSFSSA*AVDFSI
Trigger: GATGCTGAAGTCCACGGCCCATGCTGATGAGAAGGA...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGACGATGTTCTCGTGCTaGCCCAGGTGGCTCATGATC +
Preference number: 4 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGTMFSC*PRWLMI
Trigger: GATCATGAGCCACCTGGGCCAGCACGAGAACATCGT...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGCCCAAGTTTCAGAGCTaGGCCGAGCTGTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGPKFQS*AELLSE
Trigger: TTCACTCAACAGCTCGGCCCAGCTCTGAAACTTGGG...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTACCCATGCTCAGGAAGTaGGATCCTCTGACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LSASLSSPKEPGFLSISVPMLRK*DPLTSP
Trigger: AGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGG...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGCCCATGCTCAGGAAGTaGGATCCTCTGACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGPMLRK*DPLTSP
Trigger: AGGGGAGGTCAGAGGATCCCACTTCCTGAGCATGGG...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAGCTTCCTGCTTGGTGTaGCCAGCCACATGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVASCLV*PATCQG
Trigger: ACCTTGGCATGTGGCTGGCCACACCAAGCAGGAAGC...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAAGTCCTGGCTCTGAATaGACTTGGCCCTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVSPGSE*TWPCGW
Trigger: CCATCCACAGGGCCAAGTTCATTCAGAGCCAGGACT...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTCTACTTGATCGAGGTTaGGGGTCAGGACTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSLLDRG*GSGLFG
Trigger: ACCAAAAAGTCCTGACCCTCAACCTCGATCAAGTAG...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACTGCAGAGATGGGTATaGAGGCCCAGGAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTLQRWV*RPRSHS
Trigger: GGAGTGGCTCCTGGGCCTTCATACCCATCTCTGCAG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp ATGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGCCCAGCAGGCCTGCATaGTGCTGTATATATTCTTTG +
Preference number: 4 (lower is better)
Translates to: MQFLEARKAMPWATWLEKPSRPA*CCIYSL
Trigger: CAAAGAATATATACAGCATCATGCAGGCCTGCTGGG...CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGTCCTCTGACCTCCCCTaGATCCCTCACCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMSSDLP*IPHLPK
Trigger: CTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGA...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGGTGAGGCTGTGGAGTaGAGGCGGCGTATAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHGEAVE*RRRIGQ
Trigger: CTGCCCTATACGCCGCCTTCACTCCACAGCCTCACC...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGCTTCTCCTCACTTCGTaGTCTCACGCTTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGLLLTS*SHAFGH
Trigger: GTGTCCAAAAGCGTGAGAGCACGAAGTGAGGAGAAG...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000286301.7
CDS-3UTR GCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGTGGATGGCGGCGCTaGCTCCCAGGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVGGWRR*LPGGLQ
Trigger: CTGGAGACCCCCTGGGAGGCAGCGCCGCCATCCACC...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACACACCAGCGAGACGCCTaGTTCCAGCACCGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTHQRDA*FQHRVC
Trigger: ACAGACCCGGTGCTGGAAGCAGGCGTCTCGCTGGTG...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCACCAGCGAGACGCCTaGTTCCAGCACCGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHHQRDA*FQHRVC
Trigger: ACAGACCCGGTGCTGGAAGCAGGCGTCTCGCTGGTG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGCCTGGGATGACTTTCTaGACTTTCAGCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWEPGMTF*TFSRML
Trigger: CAGCATCCGGCTGAAAGTGCAGAAAGTCATCCCAGG...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CGCTTCTGCTGCTGCTCGGCAGATTGGTATAGTCCCGCTCTCTCCTGTCCTCTTAGATTGTTGAGGGATTaGGAGCTTGGTGTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: RFCCCSADWYSPALSCPLRLLRD*ELGVVV
Trigger: CACAACAACACCAAGCTCGCAATCCCTCAACAATCT...AAGAGGACAGGAGAGAGCGGGACTATACCAATCTGCCGAGCAGCAGCAGAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR GCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACATGGAGGTGGAGTGCTTaGCCTGCACGTTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTWRWSA*PARCWP
Trigger: TGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCA...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGAACATGGAGGTGGAGTaGTTGCCCTGCACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGNMEVE*LPCTLL
Trigger: CAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTT...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGAGAGGGTGAAGGTGTaGCTGTATGTGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGERVKV*LYVSLV
Trigger: CACCAAGGACACATACAGGCACACCTTCACCCTCTC...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGACAGTCAGCAGGCTCTaGACCGTCACCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGTVSRL*TVTLWK
Trigger: CTTCCACAAGGTGACGGTGCAGAGCCTGCTGACTGT...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAACAGTCAGCAGGCTCTaGACCGTCACCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVTVSRL*TVTLWK
Trigger: CTTCCACAAGGTGACGGTGCAGAGCCTGCTGACTGT...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGATGCGTGTGGGCTCCTaGAGAGATGGGTATGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGMRVGS*RDGYEG
Trigger: GCCTTCATACCCATCTCTGCAGGAGCCCACACGCAT...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGCTGTTCACCAGGATaGCAGGGTAGGGATTCAGCC +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVCCSPG*QGRDSA
Trigger: GGCTGAATCCCTACCCTGGCATCCTGGTGAACAGCA...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCTGCTGCTGCTGCCGCTaGCACCGCTTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGCCCCR*HRFCCC
Trigger: GCAGCAGCAGAAGCGGTGGCAGCGGCAGCAGCAGCA...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGCAAGGCTGGGGGCCCTaGGATGACTTTCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGQGWGP*DDFLHF
Trigger: AAAGTGCAGAAAGTCATCCCAGGGCCCCCAGCCTTG...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAGAGGGATTGCGAGCTTaGTGTTGTTGTGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLEGLRA*CCCVGG
Trigger: TCCTCCAACACAACAACACCAAGCTCGCAATCCCTC...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGAGCTCTCCAGCCTCCTaGGTTTCTGGCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMSSPAS*VSGQEG
Trigger: TCCTTCCTGGCCAGAAACCCAGGAGGCTGGAGAGCT...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTATCTTCCAGCGGACCTaGTACTTGGGCTTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAIFQRT*YLGFCL
Trigger: TAAGCAGAAGCCCAAGTACCAGGTCCGCTGGAAGAT...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGAGGAAGGCCATGCCCTaGGCTACTTGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMRKAMP*ATWLEK
Trigger: CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCT...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAGGCAGGCTGGGCCATTTaGTATCCATCCTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: QLLAATWLITAVPVWGWEAGWAI*YPSFTS
Trigger: ACTGGTGAAGGATGGATACCAAATGGCCCAGCCTGC...CTCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGGCTGCAGCAAGGGCTaGGCGATATCCCCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPGCSKG*AISPCS
Trigger: CGAGCAAGGGGATATCGCCCAGCCCTTGCTGCAGCC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTATGTGGGAGGGGAGAGTaGTACTCCCTGTCGTCAACT +
Preference number: 4 (lower is better)
Translates to: LSASLSSPKEPGFLSISVCGRGE*YSLSST
Trigger: AGTTGACGACAGGGAGTACCACTCTCCCCTCCCACA...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGAGAAGGAGTCATTCTTTTAGCTGCCACTTaGCTCATTACAGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: LQGPSILLVQVLLREGVILLAAT*LITAVP
Trigger: TGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAG...AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGAGTCCTGGCTCTGAATaGACTTGGCCCTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMSPGSE*TWPCGW
Trigger: CCATCCACAGGGCCAAGTTCATTCAGAGCCAGGACT...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGTTGGAAATCTACTTaGTCGAGGTTGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HPQLLAATWLITAVPVWGCWKST*SRLRVR
Trigger: CCTGACCCTCAACCTCGATCAAGTAGATTTCCAACA...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGCAGCAGCAAGGCCATaGTGGACATGCAGGCGACCA +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHAAARP*WTCRRP
Trigger: TGGTCGCCTGCATGTCCATCATGGCCTTGCTGCTGC...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGTCTTCAGCTCGGACATaGGGGCCTCCTTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMSSART*GPPSHQ
Trigger: CTGATGAGAAGGAGGCCCTCATGTCCGAGCTGAAGA...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTACCAATCTTGGCCACATaGCCATTGGTCAACAGCACG +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVPILAT*PLVNST
Trigger: CGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGG...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGATTCAGCCCAAGTaGGAAGATCTCCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMGIQPK*EDLPEE
Trigger: CTCCTCTGGGAGATCTTCTCACTTGGGCTGAATCCC...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCCAAGGGGCCTGAGCTaGGTGTGGTCTGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHPRGLS*VWSVSI
Trigger: GATGCTCACAGACCACACTCAGCTCAGGCCCCTTGG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCTTCTAGCCCAGAATaGCGGGACTGGGCAGAACAC +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTPSSPE*RDWAEH
Trigger: GTGTTCTGCCCAGTCCCGTCATTCTGGGCTAGAAGG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGAGACATCCCACGGCGTaGCTGTTAGTTAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGRHPTA*LLVRMS
Trigger: ACTCATCCTAACTAACAGTCACGCCGTGGGATGTCT...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTAATTCCACGCTGCCATTaGCCACACATCGCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LSASLSSPKEPGFLSISVIPRCH*PHIARS
Trigger: TGACCTTGCGATGTGTGGGCAATGGCAGCGTGGAAT...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGGTCTCCAGGCTCAGTaGAGCGATAGGTCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTGLQAQ*SDRSPC
Trigger: ACACGGGGACCTATCGCTGCACTGAGCCTGGAGACC...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGTGTGGCCACTGCACTaGAGCCATGTCACGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKVWPLH*SHVTLG
Trigger: GCCCAACGTGACATGGCTGCAGTGCAGTGGCCACAC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACAGGGTCATCCCAGACCTaGAGCACTTGGGCCTCATCA +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTGSSQT*STWASS
Trigger: TGATGAGGCCCAAGTGCTGCAGGTCTGGGATGACCC...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTATTCTTTGGGGCAAATaGAGGCTGGGCCATTTGGTA +
Preference number: 4 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAILWGK*RLGHLV
Trigger: TACCAAATGGCCCAGCCTGCATTTGCCCCAAAGAAT...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCATGGGCGATATCCCCTTaGTCGCAGCAGGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPWAISP*SQQVRC
Trigger: GCACCTGACCTGCTGCGAGCAAGGGGATATCGCCCA...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGTGGGCGATATCCCCTTaGTCGCAGCAGGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKWAISP*SQQVRC
Trigger: GCACCTGACCTGCTGCGAGCAAGGGGATATCGCCCA...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAACTGGGCTCTATCACTaGGATTCCCTGACCATGCCA +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVTGLYH*DSLTMP
Trigger: TGGCATGGTCAGGGAATCCCAGTGATAGAGCCCAGT...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGCTGAGCACACGATCTaGGCAGCCTCCCCTCGAATC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKAEHTI*AASPRI
Trigger: GATTCGAGGGGAGGCTGCCCAGATCGTGTGCTCAGC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTATATGACGCTTACCTCTaGGGGGTATCGAAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LSASLSSPKEPGFLSISVYDAYL*GVSKGE
Trigger: CTCACCCTTCGATACCCCCCAGAGGTAAGCGTCATA...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCACATGTCACGTTGGGCTaGGGGTACCCAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPHVTLG*GYPEAA
Trigger: TGCTGCCTCTGGGTACCCCCAGCCCAACGTGACATG...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCCAGACCAAAGGCCGTaGCCTCCACCACCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHPDQRP*PPPPSQ
Trigger: TTGGGAAGGTGGTGGAGGCCACGGCCTTTGGTCTGG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACACCAGACCAAAGGCCGTaGCCTCCACCACCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTPDQRP*PPPPSQ
Trigger: TTGGGAAGGTGGTGGAGGCCACGGCCTTTGGTCTGG...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGACGATGTTCTCGTGCTaGCCCAGGTGGCTCATGATC +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMTMFSC*PRWLMI
Trigger: GATCATGAGCCACCTGGGCCAGCACGAGAACATCGT...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGCAGGCTGGGCCATTTaGTATCCATCCTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGAGWAI*YPSFTS
Trigger: ACTGGTGAAGGATGGATACCAAATGGCCCAGCCTGC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGCAAATGCAGGCTaGGCCATTTGGTATCCATCC +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMGANAG*AIWYPS
Trigger: GGATGGATACCAAATGGCCCAGCCTGCATTTGCCCC...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTGAAGCTGTATATATTCTTTaGGGCAAATGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NSWKRGRPCPGLLGWRSEAVYIL*GKCRLG
Trigger: GCCCAGCCTGCATTTGCCCCAAAGAATATATACAGC...TTCACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp GTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCTGCCACTATCAGTGTAGCTCCTaGGGACTTCATAGGCATAAA +
Preference number: 4 (lower is better)
Translates to: VPNLGHMTIGQQHVTRCHYQCSS*GLHRHK
Trigger: TTTATGCCTATGAAGTCCCCAGGAGCTACACTGATA...GTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTCTTTTAGCTGCCACTTaGCTCATTACAGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSLLAAT*LITAVP
Trigger: TGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAG...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGCCACTGTCCCTCCATaGGTACAGGCTCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPATVPP*VQAPRR
Trigger: CCTTCTGGGAGCCTGTACCCATGGAGGGACAGTGGC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCTCATAGCTCTCGATaGTCTTCCAGCGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTPHSSR*SSSGPG
Trigger: ACCAGGTCCGCTGGAAGATCATCGAGAGCTATGAGG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAAGGCTCCCAGAAGGTTaGCGATGTTCTCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPRLPEG*RCSRAG
Trigger: GCCAGCACGAGAACATCGTCAACCTTCTGGGAGCCT...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAAGGCTCCCAGAAGGTTaGCGATGTTCTCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTRLPEG*RCSRAG
Trigger: GCCAGCACGAGAACATCGTCAACCTTCTGGGAGCCT...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGAGGCTCCCAGAAGGTTaGCGATGTTCTCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKRLPEG*RCSRAG
Trigger: GCCAGCACGAGAACATCGTCAACCTTCTGGGAGCCT...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCACTTGGCTGGAGAAGTaGAGCAGGTCCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGTWLEK*SRSRSS
Trigger: GGAGCTCCGGGACCTGCTTCACTTCTCCAGCCAAGT...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACAGGCCGAGCTGTTGAGTaGAATGACCGAAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTGRAVE*NDRRQS
Trigger: ACTCTGCCTTCGGTCATTTCACTCAACAGCTCGGCC...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGCTGAGTGTGGTCTGTaGGCATCTGCTGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKAECGL*ASAAPL
Trigger: GAGAGGAGCAGCAGATGCTCACAGACCACACTCAGC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGTCGCAAGGTCACCGTTaGTCCTGGCTTCACGACCAG +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKSQGHR*SWLHDQ
Trigger: CTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGA...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCGGTCTCCAGGCTCAGTaGAGCGATAGGTCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGGLQAQ*SDRSPC
Trigger: ACACGGGGACCTATCGCTGCACTGAGCCTGGAGACC...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATTGGACATCACCTTCCTaGCACCCATCAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHWTSPS*HPSGHC
Trigger: GCAGTGCCCTGATGGGTGGCAGGAAGGTGATGTCCA...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAAATCCGCACCAGCTCTaGAGGCACCAGTGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPNPHQL*RHQCQG
Trigger: GCCTTGACACTGGTGCCTGCAGAGCTGGTGCGGATT...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGAGAGGGTGAAGGTGTaGCTGTATGTGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMERVKV*LYVSLV
Trigger: CACCAAGGACACATACAGGCACACCTTCACCCTCTC...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCGTGTGGCCACTGCACTaGAGCCATGTCACGTTGGGC +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGVWPLH*SHVTLG
Trigger: GCCCAACGTGACATGGCTGCAGTGCAGTGGCCACAC...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGTATCAGTGTGGCCACTaGACTGCAGCCATGTCACGT +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMYQCGH*TAAMSR
Trigger: ACGTGACATGGCTGCAGTGCAGTGGCCACACTGATA...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCGGACAGCATCCTCCTTaGCCAGACCAAAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGGQHPP*PDQRPW
Trigger: CCACGGCCTTTGGTCTGGGCAAGGAGGATGCTGTCC...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGTCCTTGTCCAGGTCTTaGTCAGAGAAGGAGTCATTT +
Preference number: 4 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGSLSRS*SEKESF
Trigger: AAATGACTCCTTCTCTGAGCAAGACCTGGACAAGGA...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCAAGCGAGGAAGGCCATaGCCTGGGCTACTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGKRGRP*PGLLGW
Trigger: CCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTT...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGATTCTTTGGGGCAAATaGAGGCTGGGCCATTTGGTA +
Preference number: 4 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGILWGK*RLGHLV
Trigger: TACCAAATGGCCCAGCCTGCATTTGCCCCAAAGAAT...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGCTCACTGCTGCTGCTaGCGCTGCCACCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVAHCCC*RCHRFC
Trigger: GCAGAAGCGGTGGCAGCGGCAGCAGCAGCAGTGAGC...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCAGGGATCGGGACACTaGACACACGTTCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHQGSGH*THVPLL
Trigger: GAGGAGAGGAACGTGTGTCCAGTGTCCCGATCCCTG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGCAGGGATCGGGACACTaGACACACGTTCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKQGSGH*THVPLL
Trigger: GAGGAGAGGAACGTGTGTCCAGTGTCCCGATCCCTG...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCAGCTCAGGGACACTaGGCTCTATCACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTPAQGH*ALSLGF
Trigger: GAATCCCAGTGATAGAGCCCAGTGTCCCTGAGCTGG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCGCTGAGCACACGATCTaGGCAGCCTCCCCTCGAATC +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGAEHTI*AASPRI
Trigger: GATTCGAGGGGAGGCTGCCCAGATCGTGTGCTCAGC...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGCCCACGGTCACCTCCTaGATGAGGTTCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRPTVTS*MRFCSE
Trigger: CTCTGAGCAGAACCTCATCCAGGAGGTGACCGTGGG...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACATTGGGCTCAGGCTGGTaGTCAGAAAAGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTLGSGW*SEKGPR
Trigger: CCTGGGACCCTTTTCTGACCACCAGCCTGAGCCCAA...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGTCACACCTATCAGTGTaGCCACTGCACTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMSHLSV*PLHCSH
Trigger: ATGGCTGCAGTGCAGTGGCCACACTGATAGGTGTGA...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACACAGGACCTCAGGGTATaGGTCATCCCAGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTQDLRV*VIPDLQ
Trigger: CTGCAGGTCTGGGATGACCCATACCCTGAGGTCCTG...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGCTGCCACGTCCCGGTaGATGCAATTCTTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPAATSR*MQFLEA
Trigger: CGCTTCCAAGAATTGCATCCACCGGGACGTGGCAGC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAAGATCTGCTGGAAGGTaGGTCTGTGGGTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTRSAGR*VCGWAP
Trigger: TGGAGCCCACCCACAGACCCACCTTCCAGCAGATCT...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGAGAACTGATAGTTGTTaGGCTGCAGCAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMRTDSC*AAARAG
Trigger: CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCT...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACACTTTCAGCCGGATGCTaGTGGACATCACCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTLSAGC*WTSPSC
Trigger: GCAGGAAGGTGATGTCCATCAGCATCCGGCTGAAAG...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCTTTCAGCCGGATGCTaGTGGACATCACCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHLSAGC*WTSPSC
Trigger: GCAGGAAGGTGATGTCCATCAGCATCCGGCTGAAAG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCACTTTCAGCCGGATGCTaGTGGACATCACCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPLSAGC*WTSPSC
Trigger: GCAGGAAGGTGATGTCCATCAGCATCCGGCTGAAAG...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCGGGGGTATCGAAGGGTaGGCTCAAACGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGGGIEG*AQTSEL
Trigger: GAGCTCTGACGTTTGAGCTCACCCTTCGATACCCCC...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACAGCTGCGTGGGGTCGATaGAAGTATAACTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTAAWGR*KYNCCP
Trigger: AGGGCAACAGTTATACTTTCATCGACCCCACGCAGC...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCGGAAGTGGGATCCTCTaGCCTCCCCTGAATCCCTCA +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGGSGIL*PPLNPS
Trigger: TGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCC...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCTCGCAAGGTCACCGTTaGTCCTGGCTTCACGACCAG +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGSQGHR*SWLHDQ
Trigger: CTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGA...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGCCACGCAGGAGTAGTTaGCGGCATGTTGGAAATCTA +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMPRRSS*RHVGNL
Trigger: TAGATTTCCAACATGCCGGCAACTACTCCTGCGTGG...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGTGGAGTGCTTGCCCTaGACGTTGCTGGCCACGCAG +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVVECLP*TLLATQ
Trigger: CTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCAC...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCGCTGTTGTGGGCCCTaGACTCGTAGGTTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHRCCGP*TRRFGC
Trigger: ACAACCAAACCTACGAGTGCAGGGCCCACAACAGCG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTAAGAAGCCACTGTCCCTaGGGACATATTTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LSASLSSPKEPGFLSISVRSHCP*GHISSR
Trigger: TCGAGAAGAAATATGTCCGCAGGGACAGTGGCTTCT...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR GCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATACAGCACGTTACGCGCTaGCACGTCCCGGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIQHVTR*HVPVDA
Trigger: TGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTG...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGAGACACAGTCAAAGATaGTCTCTGGGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMRHSQR*SLGPST
Trigger: AGTGGATGGCCCCAGAGAGCATCTTTGACTGTGTCT...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAGGAAGGAGCAGATCTaGTGGAAGGTGGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRRKEQI*WKVGLW
Trigger: CCACAGACCCACCTTCCAGCAGATCTGCTCCTTCCT...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAAGGAAGGAGCAGATCTaGTGGAAGGTGGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTRKEQI*WKVGLW
Trigger: CCACAGACCCACCTTCCAGCAGATCTGCTCCTTCCT...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCATGCCAAGGTCCCCTaGCTTCTAGCCCAGAATGAC +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHHAKVP*LLAQND
Trigger: GTCATTCTGGGCTAGAAGGCAGGGGACCTTGGCATG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGAGTTTGTGCTTCCTaGTTGGTGTGGCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKGVCAS*LVWPAT
Trigger: TGTGGCTGGCCACACCAAGCAGGAAGCACAAACTCC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGCAAGGCTGGGGGCCCTaGGATGACTTTCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRQGWGP*DDFLHF
Trigger: AAAGTGCAGAAAGTCATCCCAGGGCCCCCAGCCTTG...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGAAAACCTTGCAGGCCTaGGTAGGCCTCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKKTLQA*VGLHHD
Trigger: GTCATGGTGGAGGCCTACCCAGGCCTGCAAGGTTTT...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAAAAACCTTGCAGGCCTaGGTAGGCCTCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTKTLQA*VGLHHD
Trigger: GTCATGGTGGAGGCCTACCCAGGCCTGCAAGGTTTT...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAGCCATGTCACGTTaGGCTGGGGGTACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIAAMSR*AGGTQR
Trigger: CCTCTGGGTACCCCCAGCCCAACGTGACATGGCTGC...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACATCACACCTATCAGTGTaGCCACTGCACTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTSHLSV*PLHCSH
Trigger: ATGGCTGCAGTGCAGTGGCCACACTGATAGGTGTGA...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGATCTTCCAGCGGACCTaGTACTTGGGCTTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMIFQRT*YLGFCL
Trigger: TAAGCAGAAGCCCAAGTACCAGGTCCGCTGGAAGAT...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACATCAGCATGGGCCGTaGACTTCAGCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTHQHGP*TSASSQ
Trigger: CTGTGAAGATGCTGAAGTCCACGGCCCATGCTGATG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGCGAAGTCCCCAATCTTaGCCACATGACCATTGGTCA +
Preference number: 4 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMRSPQS*PHDHWS
Trigger: TGACCAATGGTCATGTGGCCAAGATTGGGGACTTCG...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGGCAAATGCAGGCTaGGCCATTTGGTATCCATCC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKGANAG*AIWYPS
Trigger: GGATGGATACCAAATGGCCCAGCCTGCATTTGCCCC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGCTGTATATATTCTTTaGGGCAAATGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGAVYIL*GKCRLG
Trigger: GCCCAGCCTGCATTTGCCCCAAAGAATATATACAGC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGTGTGGGAGGGGAGAGTaGTACTCCCTGTCGTCAACT +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKCGRGE*YSLSST
Trigger: AGTTGACGACAGGGAGTACCACTCTCCCCTCCCACA...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTATATCAGTGTAGCTCCTaGGGACTTCATAGGCATAAA +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLYQCSS*GLHRHK
Trigger: TTTATGCCTATGAAGTCCCCAGGAGCTACACTGATA...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAGCAGCAAGGCCATaGTGGACATGCAGGCGACCA +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIAAARP*WTCRRP
Trigger: TGGTCGCCTGCATGTCCATCATGGCCTTGCTGCTGC...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATTCCTTCGCAGAAAGTTaGGCAGGTCGCCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHSFAES*AGRHSN
Trigger: GTTGCTATGGCGACCTGCTCAACTTTCTGCGAAGGA...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGGCGGGCATTGCCCTTaGCAATGTAGTTGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHGGHCP*QCSWSH
Trigger: ATGACTCCAACTACATTGTCAAGGGCAATGCCCGCC...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACAAGACATCCCACGGCGTaGCTGTTAGTTAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTRHPTA*LLVRMS
Trigger: ACTCATCCTAACTAACAGTCACGCCGTGGGATGTCT...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGCACCCATCAGGGCACTaGATTGATAGTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKHPSGH*IDSPGS
Trigger: AGAGCCAGGACTATCAATGCAGTGCCCTGATGGGTG...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGCCTGGGATGACTTTCTaGACTTTCAGCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKPGMTF*TFSRML
Trigger: CAGCATCCGGCTGAAAGTGCAGAAAGTCATCCCAGG...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGAGATTGTTGAGGGATTaGGAGCTTGGTGTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGRLLRD*ELGVVV
Trigger: CACAACAACACCAAGCTCGCAATCCCTCAACAATCT...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATGCGTGTGGGCTCCTaGAGAGATGGGTATGAAGGC +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGMRVGS*RDGYEG
Trigger: GCCTTCATACCCATCTCTGCAGGAGCCCACACGCAT...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTATGGTACTTGGGCTTCTaGTTATACTTGTACAATAGC +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLWYLGF*LYLYNS
Trigger: GCTATTGTACAAGTATAAGCAGAAGCCCAAGTACCA...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATAGGGTCTTACCAAACTaGAGGTTGTTCCGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHRVLPN*RLFRGN
Trigger: GTTCCCCCGGAACAACCTGCAGTTTGGTAAGACCCT...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGACTGGGCTCTATCACTaGGATTCCCTGACCATGCCA +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKTGLYH*DSLTMP
Trigger: TGGCATGGTCAGGGAATCCCAGTGATAGAGCCCAGT...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGGTCACCGTTGCTCCTaGCTTCACGACCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIGHRCS*LHDQLR
Trigger: CCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACC...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGATGAACTTGGCCCTGTaGATGGTGAAGCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRMNLAL*MVKPCQ
Trigger: CTGGCATGGCTTCACCATCCACAGGGCCAAGTTCAT...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATATGAACTTGGCCCTGTaGATGGTGAAGCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHMNLAL*MVKPCQ
Trigger: CTGGCATGGCTTCACCATCCACAGGGCCAAGTTCAT...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCTGAGCACACGATCTaGGCAGCCTCCCCTCGAATC +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIAEHTI*AASPRI
Trigger: GATTCGAGGGGAGGCTGCCCAGATCGTGTGCTCAGC...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTTTGGTGTTGTTGTGTTaGAGGAAGACATCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSLVLLC*RKTSKL
Trigger: TAACTTTGATGTCTTCCTCCAACACAACAACACCAA...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATATGCCCTGCACGTTGCTaGCCACGCAGGAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGICPARC*PRRSSC
Trigger: GCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCA...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAAGCCTCCTGGGTTTCTaGCCAGGAAGGAGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGISLLGF*PGRSSG
Trigger: GCCGCTACTCCTTCCTGGCCAGAAACCCAGGAGGCT...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGTATGACGCTTACCTCTaGGGGGTATCGAAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRYDAYL*GVSKGE
Trigger: CTCACCCTTCGATACCCCCCAGAGGTAAGCGTCATA...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGTGGATGCAATTCTTaGAAGCGAGGAAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKGGCNS*KRGRPC
Trigger: GCATGGCCTTCCTCGCTTCCAAGAATTGCATCCACC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGGTGGATGCAATTCTTaGAAGCGAGGAAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPGGCNS*KRGRPC
Trigger: GCATGGCCTTCCTCGCTTCCAAGAATTGCATCCACC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACGAAGTCCCCAATCTTaGCCACATGACCATTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTRSPQS*PHDHWS
Trigger: TGACCAATGGTCATGTGGCCAAGATTGGGGACTTCG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAGCAGGCTGGGCCATTTaGTATCCATCCTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPAGWAI*YPSFTS
Trigger: ACTGGTGAAGGATGGATACCAAATGGCCCAGCCTGC...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAAGAACTGATAGTTGTTaGGCTGCAGCAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPRTDSC*AAARAG
Trigger: CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCT...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATAGAACTGATAGTTGTTaGGCTGCAGCAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHRTDSC*AAARAG
Trigger: CCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCT...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATATGTCCACACCCTGGCTaGAGAAGCCACTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGICPHPG*RSHCPS
Trigger: GGAGGGACAGTGGCTTCTCCAGCCAGGGTGTGGACA...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR TCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATACGGTCACCTCCTGGATaGGGTTCTGCTCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIRSPPG*GSAQSS
Trigger: TGAGCTCTGAGCAGAACCTCATCCAGGAGGTGACCG...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTTCCTCTGACCTCCCCTaGATCCCTCACCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVSSDLP*IPHLPK
Trigger: CTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGA...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTCCTTCTAGCCCAGAATaGCGGGACTGGGCAGAACAC +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVPSSPE*RDWAEH
Trigger: GTGTTCTGCCCAGTCCCGTCATTCTGGGCTAGAAGG...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCACCACGCAGGAGTAGTTaGCGGCATGTTGGAAATCTA +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPPRRSS*RHVGNL
Trigger: TAGATTTCCAACATGCCGGCAACTACTCCTGCGTGG...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACACCCCCAACTTTTAGCTaGCACTTGGCTCATTACAGC +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTPPTFS*HLAHYS
Trigger: GCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGG...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTATTGGTGTTGTTGTGTTaGAGGAAGACATCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLLVLLC*RKTSKL
Trigger: TAACTTTGATGTCTTCCTCCAACACAACAACACCAA...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGAGGGATTGCGAGCTTaGTGTTGTTGTGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTEGLRA*CCCVGG
Trigger: TCCTCCAACACAACAACACCAAGCTCGCAATCCCTC...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACAAGCGGACCTGGTACTTaGGCTTCTGCTTATACTTGT +
Preference number: 4 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTSGPGT*ASAYTC
Trigger: ACAAGTATAAGCAGAAGCCCAAGTACCAGGTCCGCT...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCTACTTGATCGAGGTTaGGGGTCAGGACTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHLLDRG*GSGLFG
Trigger: ACCAAAAAGTCCTGACCCTCAACCTCGATCAAGTAG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGTGTTGGAAATCTACTTaGTCGAGGTTGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKCWKST*SRLRVR
Trigger: CCTGACCCTCAACCTCGATCAAGTAGATTTCCAACA...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCCCAGCAGGCCTGCATaGTGCTGTATATATTCTTTG +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHPSRPA*CCIYSL
Trigger: CAAAGAATATATACAGCATCATGCAGGCCTGCTGGG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGCCCAGCAGGCCTGCATaGTGCTGTATATATTCTTTG +
Preference number: 4 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRPSRPA*CCIYSL
Trigger: CAAAGAATATATACAGCATCATGCAGGCCTGCTGGG...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTCATCCCATTCCACGCTaGCATTGCCCACACATCGCA +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVHPIPR*HCPHIA
Trigger: TGCGATGTGTGGGCAATGGCAGCGTGGAATGGGATG...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTAACATGGAGGTGGAGTaGTTGCCCTGCACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVNMEVE*LPCTLL
Trigger: CAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTT...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATACGCTGTTGTGGGCCCTaGACTCGTAGGTTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIRCCGP*TRRFGC
Trigger: ACAACCAAACCTACGAGTGCAGGGCCCACAACAGCG...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTCGCTGTTGTGGGCCCTaGACTCGTAGGTTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVRCCGP*TRRFGC
Trigger: ACAACCAAACCTACGAGTGCAGGGCCCACAACAGCG...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGTACTTGGGCTTCTaGTTATACTTGTACAATAGC +
Preference number: 4 (lower is better)
Translates to: AEHPQLLAATWLITAVPVWYLGF*LYLYNS
Trigger: GCTATTGTACAAGTATAAGCAGAAGCCCAAGTACCA...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAGAAGCCACTGTCCCTaGGGACATATTTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRRSHCP*GHISSR
Trigger: TCGAGAAGAAATATGTCCGCAGGGACAGTGGCTTCT...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000675795.1
CDS-3UTR GCA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCAGACACAGTCAAAGATaGTCTCTGGGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGRHSQR*SLGPST
Trigger: AGTGGATGGCCCCAGAGAGCATCTTTGACTGTGTCT...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTTGCTGTTCACCAGGATaGCAGGGTAGGGATTCAGCC +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVCCSPG*QGRDSA
Trigger: GGCTGAATCCCTACCCTGGCATCCTGGTGAACAGCA...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGATTCTTTGGGGCAAATaGAGGCTGGGCCATTTGGTA +
Preference number: 4 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRILWGK*RLGHLV
Trigger: TACCAAATGGCCCAGCCTGCATTTGCCCCAAAGAAT...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGGAGTTTGTGCTTCCTaGTTGGTGTGGCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIGVCAS*LVWPAT
Trigger: TGTGGCTGGCCACACCAAGCAGGAAGCACAAACTCC...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAAAAACCTTGCAGGCCTaGGTAGGCCTCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIKTLQA*VGLHHD
Trigger: GTCATGGTGGAGGCCTACCCAGGCCTGCAAGGTTTT...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATAGCGGACCTGGTACTTaGGCTTCTGCTTATACTTGT +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHSGPGT*ASAYTC
Trigger: ACAAGTATAAGCAGAAGCCCAAGTACCAGGTCCGCT...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGGCTGTATATATTCTTTaGGGCAAATGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRAVYIL*GKCRLG
Trigger: GCCCAGCCTGCATTTGCCCCAAAGAATATATACAGC...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGCTGCGTGGGGTCGATaGAAGTATAACTGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVAAWGR*KYNCCP
Trigger: AGGGCAACAGTTATACTTTCATCGACCCCACGCAGC...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCATCCTTGTCCAGGTCTTaGTCAGAGAAGGAGTCATTT +
Preference number: 4 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPSLSRS*SEKESF
Trigger: AAATGACTCCTTCTCTGAGCAAGACCTGGACAAGGA...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATATCTGTGAGCATCTGCTaGTCCTCTCAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGISVSIC*SSQRGR
Trigger: TCTCCCTCTCTGAGAGGAGCAGCAGATGCTCACAGA...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAACTGGGCTCTATCACTaGGATTCCCTGACCATGCCA +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGITGLYH*DSLTMP
Trigger: TGGCATGGTCAGGGAATCCCAGTGATAGAGCCCAGT...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAATGAACTTGGCCCTGTaGATGGTGAAGCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIMNLAL*MVKPCQ
Trigger: CTGGCATGGCTTCACCATCCACAGGGCCAAGTTCAT...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTTCCTTCTCATCAGCATaGGCCGTGGACTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVSFSSA*AVDFSI
Trigger: GATGCTGAAGTCCACGGCCCATGCTGATGAGAAGGA...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTTGGCCACATGACCATTaGTCAACAGCACGTTACGCG +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVWPHDH*STARYA
Trigger: CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCA...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTCCCAAGTTTCAGAGCTaGGCCGAGCTGTTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVPKFQS*AELLSE
Trigger: TTCACTCAACAGCTCGGCCCAGCTCTGAAACTTGGG...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATACCACGCAGGAGTAGTTaGCGGCATGTTGGAAATCTA +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIPRRSS*RHVGNL
Trigger: TAGATTTCCAACATGCCGGCAACTACTCCTGCGTGG...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATTATCAGTGTAGCTCCTaGGGACTTCATAGGCATAAA +
Preference number: 4 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHYQCSS*GLHRHK
Trigger: TTTATGCCTATGAAGTCCCCAGGAGCTACACTGATA...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR TCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTTGTTGGAAATCTACTTaGTCGAGGTTGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVCWKST*SRLRVR
Trigger: CCTGACCCTCAACCTCGATCAAGTAGATTTCCAACA...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGAAGGTTCTACTAGTTaGCATAGCAAACACGAGGCC +
Preference number: 4 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVEGSTS*HSKHEA
Trigger: GGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTC...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR GCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAAGATTGTTGAGGGATTaGGAGCTTGGTGTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIRLLRD*ELGVVV
Trigger: CACAACAACACCAAGCTCGCAATCCCTCAACAATCT...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGTTGGTGTTGTTGTGTTaGAGGAAGACATCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKLVLLC*RKTSKL
Trigger: TAACTTTGATGTCTTCCTCCAACACAACAACACCAA...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CCA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATACTTTTAGCTGCCACTTaGCTCATTACAGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: SISMKIRGLGKKVLLVGILLAAT*LITAVP
Trigger: TGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAG...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS TCA 90 bp CACGCACACGCACCAGCGAGACGCCTGCTTCCAGCACCGGGTCTGTaGGCAGACAGGGCAGTAGTGCGTCCTGGTCCTCGAACACGACCA +
Preference number: 5 (lower is better)
Translates to: HAHAPARRLLPAPGL*ADRAVVRPGPRTRP
Trigger: TGGTCGTGTTCGAGGACCAGGACGCACTACTGCCCTGTCTGCTCACAGACCCGGTGCTGGAAGCAGGCGTCTCGCTGGTGCGTGTGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS-3UTR CAA 90 bp GAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCTCTGCACCGTCACCTaGTGGAAGGGCTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: EAGPGAPGAVHPPCPGLALCTVT*WKGSWL
Trigger: GAGCCAGGAGCCCTTCCACAAGGTGACGGTGCAGAG...AGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS CCA 90 bp TCCCTTAAGTCCCTGGGCACCAAAGGGCCTCTGTCCAAGGGCCCATaGGCTCCCTGCAACCCCCACAGGCCCTGTGATAGGAAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SLKSLGTKGPLSKGP*APCNPHRPCDRKLW
Trigger: CCACAGCTTCCTATCACAGGGCCTGTGGGGGTTGCAGGGAGCCCATGGGCCCTTGGACAGAGGCCCTTTGGTGCCCAGGGACTTAAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513609.1
CDS CCA 90 bp GCAAGGTCACCGTTGCTCCTGGCTTCACGACCAGCTCAGGGACACTaGGCTCTATCACTGGGATTCCCTGACCCTGGCCGCAGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: ARSPLLLASRPAQGH*ALSLGFPDPGRSSL
Trigger: GAGGGAACTGCGGCCAGGGTCAGGGAATCCCAGTGATAGAGCCCAGTGTCCCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511344.1
CDS-3UTR CAA 90 bp GAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCATTCCACGCTGCCATaGCCCACACATCGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: EAGPGAPGAVHPPCPGLAHSTLP*PTHRKV
Trigger: GACCTTGCGATGTGTGGGCAATGGCAGCGTGGAATG...AGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp GTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGGTTTGTGCTTCCTGCTaGGTGTGGCCAGCCACATGC +
Preference number: 5 (lower is better)
Translates to: VKQVPELQGPSILLVQVLVCASC*VWPATC
Trigger: GCATGTGGCTGGCCACACCAAGCAGGAAGCACAAAC...CAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS CCA 90 bp GGGGTATCGAAGGGTGAGCTCAAACGTCAGAGCTCTCCAGCCTCCTaGGTTTCTGGCCAGGAAGGAGTAGCGGCCAGCCTCAGAGGGCTT +
Preference number: 5 (lower is better)
Translates to: GVSKGELKRQSSPAS*VSGQEGVAASLRGL
Trigger: AAGCCCTCTGAGGCTGGCCGCTACTCCTTCCTGGCCAGAAACCCAGGAGGCTGGAGAGCTCTGACGTTTGAGCTCACCCTTCGATACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 90 bp CACCTATCAGTGTGGCCACTGCACTGCAGCCATGTCACGTTGGGCTaGGGGTACCCAGAGGCAGCACACAAAAGGGTGCCAGAGCCGTTG +
Preference number: 5 (lower is better)
Translates to: HLSVWPLHCSHVTLG*GYPEAAHKRVPEPL
Trigger: CAACGGCTCTGGCACCCTTTTGTGTGCTGCCTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCAGTGCAGTGGCCACACTGATAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS GCA 90 bp AAGGGCTCCTGGCTCAGGACCTCAGGGTATGGGTCATCCCAGACCTaGAGCACTTGGGCCTCATCACACCTATCAGTGTGGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: KGSWLRTSGYGSSQT*STWASSHLSVWPLH
Trigger: GTGCAGTGGCCACACTGATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTGGGATGACCCATACCCTGAGGTCCTGAGCCAGGAGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 90 bp GCAAGGTCACCGTTGCTCCTGGCTTCACGACCAGCTCAGGGACACTaGGCTCTATCACTGGGATTCCCTGACCATGCCAAGCTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: ARSPLLLASRPAQGH*ALSLGFPDHAKLWP
Trigger: TGGCCACAGCTTGGCATGGTCAGGGAATCCCAGTGATAGAGCCCAGTGTCCCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CCA 90 bp CATCACACCTATCAGTGTGGCCACTGCACTGCAGCCATGTCACGTTaGGCTGGGGGTACCCAGAGGCAGCACACAAAAGGGTGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: HHTYQCGHCTAAMSR*AGGTQRQHTKGCQS
Trigger: GCTCTGGCACCCTTTTGTGTGCTGCCTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCAGTGCAGTGGCCACACTGATAGGTGTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 90 bp CACCGTCACCTTGTGGAAGGGCTCCTGGCTCAGGACCTCAGGGTATaGGTCATCCCAGACCTGCAGCACTTGGGCCTCATCACACCTATC +
Preference number: 5 (lower is better)
Translates to: HRHLVEGLLAQDLRV*VIPDLQHLGLITPI
Trigger: GATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTGGGATGACCCATACCCTGAGGTCCTGAGCCAGGAGCCCTTCCACAAGGTGACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 90 bp CACCACCACCCTGATGCTTACCTACCACCCGGAAGAACATGGAGGTaGAGTGCTTGCCCTGCACGTTGCTGGCCACGCAGGAGTAGTTGC +
Preference number: 5 (lower is better)
Translates to: HHHPDAYLPPGRTWR*SACPARCWPRRSSC
Trigger: GCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAGGTAAGCATCAGGGTGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502660.5
CDS CCA 90 bp ACTGTCCACCACCACCCTGATGCTTACCTACCACCCGGAAGAACATaGAGGTGGAGTGCTTGCCCTGCACGTTGCTGGCCACGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: TVHHHPDAYLPPGRT*RWSACPARCWPRRS
Trigger: ACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAGGTAAGCATCAGGGTGGTGGTGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502660.5
CDS CCA 90 bp CCATGGGCTCCCTGCAACCCCCACAGGCCCTGTGATAGGAAGCTGTaGAGTGATGAGCTGCCATCTCACCAAACTGCAGGTTGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: PWAPCNPHRPCDRKL*SDELPSHQTAGCSG
Trigger: CCCGGAACAACCTGCAGTTTGGTGAGATGGCAGCTCATCACTCCACAGCTTCCTATCACAGGGCCTGTGGGGGTTGCAGGGAGCCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513609.1
CDS CCA 90 bp AGAGAGAGGGTGAAGGTGTGCCTACCACCCGGAAGAACATGGAGGTaGAGTGCTTGCCCTGCACGTTGCTGGCCACGCAGGAGTAGTTGC +
Preference number: 5 (lower is better)
Translates to: RERVKVCLPPGRTWR*SACPARCWPRRSSC
Trigger: GCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAGGCACACCTTCACCCTCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543093.1
CDS-3UTR CAA 90 bp GGCTGGAGAAGTGAAGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCAGCGGACCTGGTACTaGGGCTTCTGCTTATACTTG +
Preference number: 5 (lower is better)
Translates to: GWRSEAGPGAPGAVHPPCQRTWY*GFCLYL
Trigger: CAAGTATAAGCAGAAGCCCAAGTACCAGGTCCGCTG...ACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCTTCACTTCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS GCA 90 bp ATCCCATTCCACGCTGCCATTGCCCACACATCGCAAGGTCACCGTTaGTCCTGGCTTCACGACCAGCTCAGGGACACTGGGCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: IPFHAAIAHTSQGHR*SWLHDQLRDTGLYH
Trigger: GTGATAGAGCCCAGTGTCCCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGATGTGTGGGCAATGGCAGCGTGGAATGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS CCA 90 bp TTCCACGCTGCCATTGCCCACACATCGCAAGGTCACCGTTGCTCCTaGCTTCACGACCAGCTCAGGGACACTGGGCTCTATCACTGGGAT +
Preference number: 5 (lower is better)
Translates to: FHAAIAHTSQGHRCS*LHDQLRDTGLYHWD
Trigger: ATCCCAGTGATAGAGCCCAGTGTCCCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGATGTGTGGGCAATGGCAGCGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS CCA 90 bp GCCTGGTCCTCTCAGCTTCTGATCACATTGCACATGGTCTTTGTGTaGGCAGGCAGGCAGTGGAGGCCATGGGCTCTAGGGACAGAAGCC +
Preference number: 5 (lower is better)
Translates to: AWSSQLLITLHMVFV*AGRQWRPWALGTEA
Trigger: GGCTTCTGTCCCTAGAGCCCATGGCCTCCACTGCCTGCCTGCCCACACAAAGACCATGTGCAATGTGATCAGAAGCTGAGAGGACCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513609.1
ENST00000515239.5
CDS CCA 90 bp GGCCTGAGGTGGTGCACTTCCAACAGTCCTCAAGAGATGCCTCCATaGGTACAGGCTCCCAGAAGGTTGACGATGTTCTCGTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GLRWCTSNSPQEMPP*VQAPRRLTMFSCWP
Trigger: GGGCCAGCACGAGAACATCGTCAACCTTCTGGGAGCCTGTACCCATGGAGGCATCTCTTGAGGACTGTTGGAAGTGCACCACCTCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS-3UTR CAA 90 bp TCAGCAGAACTGATAGTTGTTGGGCTGCAGCAAGGGCTGGGCGATATCCCCTTGGCCTCCACCATGACTTaGAGGTTGAGCCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SAELIVVGLQQGLGDIPLASTMT*RLSPSP
Trigger: GGGGGAGGGGCTCAACCTCAAAGTCATGGTGGAGGC...CAAGGGGATATCGCCCAGCCCTTGCTGCAGCCCAACAACTATCAGTTCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGGGTCCAGTTAAAACCTaGCAGGCCTGGGTAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEGPVKT*QAWVGL
Trigger: GAGGCCTACCCAGGCCTGCAAGGTTTTAACTGGACC...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGCAGGTCCCGGAGCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCATGCCTGTATGTGTCCTaGGTGGTAGCATTAGCAAGC +
Preference number: 5 (lower is better)
Translates to: SRSRSSRGRPSSLSRSCSCLYVS*VVALAS
Trigger: GCTTGCTAATGCTACCACCAAGGACACATACAGGCA...TGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGCTCCGGGACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS TCA 90 bp TGCTCACACTCCTGCAGGATCCCTACCGACTGTCCACCACCACCCTaGTGCTTACCTACCACCCGGAAGAACATGGAGGTGGAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: CSHSCRIPTDCPPPP*CLPTTRKNMEVECL
Trigger: CAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAGGTAAGCATCAGGGTGGTGGTGGACAGTCGGTAGGGATCCTGCAGGAGTGTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502660.5
CDS-3UTR CAA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGTGGAAGGTAGCGTTGTaGGTGCTGAGGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEWKVAL*VLRMLL
Trigger: CAGCAGCATCCTCAGCACCAACAACGCTACCTTCCA...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGTGCAGCCATGTCACGTaGGGCTGGGGGTACCCAGAG +
Preference number: 5 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGCSHVT*GWGYPE
Trigger: CTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCA...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp TGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTAGGACAGCATCCTCCTaGCCCAGACCAAAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: CNSWKRGRPCPGLLGWRSRTASS*PRPKAV
Trigger: CACGGCCTTTGGTCTGGGCAAGGAGGATGCTGTCCT...ACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS GCA 90 bp CTACCACCCGGAAGAACATGGAGGTGGAGTGCTTGCCCTGCACGTTaGTGGCCACGCAGGAGTAGTTGCCGGCATGTTGGAAATCTACTT +
Preference number: 5 (lower is better)
Translates to: LPPGRTWRWSACPAR*WPRRSSCRHVGNLL
Trigger: AAGTAGATTTCCAACATGCCGGCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CCA 90 bp AAGACATCAAAGTTAACATCAACGCTGCTGGCTGAGCACACGATCTaGGCAGCCTCCCCTCGAATCCGCACCAGCTCTGCAGGCACCAGT +
Preference number: 5 (lower is better)
Translates to: KTSKLTSTLLAEHTI*AASPRIRTSSAGTS
Trigger: ACTGGTGCCTGCAGAGCTGGTGCGGATTCGAGGGGAGGCTGCCCAGATCGTGTGCTCAGCCAGCAGCGTTGATGTTAACTTTGATGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CCA 90 bp CCACCCGGAAGAACATGGAGGTGGAGTGCTTGCCCTGCACGTTGCTaGCCACGCAGGAGTAGTTGCCGGCATGTTGGAAATCTACTTGAT +
Preference number: 5 (lower is better)
Translates to: PPGRTWRWSACPARC*PRRSSCRHVGNLLD
Trigger: ATCAAGTAGATTTCCAACATGCCGGCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS-3UTR CAA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGCTCTGCACCGTCACCTaGTGGAAGGGCTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGLCTVT*WKGSWL
Trigger: GAGCCAGGAGCCCTTCCACAAGGTGACGGTGCAGAG...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGAGGACAGCATCCTCCTaGCCCAGACCAAAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGRTASS*PRPKAV
Trigger: CACGGCCTTTGGTCTGGGCAAGGAGGATGCTGTCCT...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GCTGGAGAAGCCACTGTCCGCTGCAACTCATGTGCAGATAAATCACCCCGGGAACAGGCTCCCAGAAGGTaGACGATGTTCTCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: AGEATVRCNSCADKSPREQAPRR*TMFSCW
Trigger: CCAGCACGAGAACATCGTCAACCTTCTGGGAGCCTG...TTCCCGGGGTGATTTATCTGCACATGAGTTGCAGCGGACAGTGGCTTCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS-3UTR CAA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGCTGGGCGATATCCCCTaGCTCGCAGCAGGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGLGDIP*LAAGQV
Trigger: CACCTGACCTGCTGCGAGCAAGGGGATATCGCCCAG...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTGATAGTTGTTCTGGGCGATATCCCCTaGCTCGCAGCAGGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: EGRVVLPVVNSSAELIVVLGDIP*LAAGQV
Trigger: CACCTGACCTGCTGCGAGCAAGGGGATATCGCCCAG...AACAACTATCAGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTAGCTGGGCCGAGCTGTaGAGTGAAATGACCGAAGGC +
Preference number: 5 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSSWAEL*SEMTEG
Trigger: GCCTTCGGTCATTTCACTCAACAGCTCGGCCCAGCT...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS TCA 90 bp GTTGTGTTGGAGGAAGACATCAAAGTTAACATCAACGCTGCTGGCTaGGCACACGATCTGGGCAGCCTCCCCTCGAATCCGCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: VVLEEDIKVNINAAG*AHDLGSLPSNPHQL
Trigger: GAGCTGGTGCGGATTCGAGGGGAGGCTGCCCAGATCGTGTGCTCAGCCAGCAGCGTTGATGTTAACTTTGATGTCTTCCTCCAACACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS-3UTR CAA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGCATCAGGGCACTGCATaGATAGTCCTGGCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEHQGTA*IVLALN
Trigger: ATTCAGAGCCAGGACTATCAATGCAGTGCCCTGATG...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GCGATATCCCCTTGCTCGCAGCAGGTCAGGTGCTCACTAGAGCTCTCCTCCTCCGTAGTTGCCGGCATGTaGGAAATCTACTTGATCGAG +
Preference number: 5 (lower is better)
Translates to: AISPCSQQVRCSLELSSSVVAGM*EIYLIE
Trigger: CTCGATCAAGTAGATTTCCAACATGCCGGCAACTAC...GGAGGAGGAGAGCTCTAGTGAGCACCTGACCTGCTGCGAGCAAGGGGATATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGAACCATGACTTTGAGGTaGAGCCCCTCCCCCACGGTC +
Preference number: 5 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGTMTLR*SPSPTV
Trigger: GACCGTGGGGGAGGGGCTCAACCTCAAAGTCATGGT...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGCCTCCACCATGACTTaGAGGTTGAGCCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGASTMT*RLSPSP
Trigger: GGGGGAGGGGCTCAACCTCAAAGTCATGGTGGAGGC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAGGTCCAGTTAAAACCTaGCAGGCCTGGGTAGGCCTC +
Preference number: 5 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLGPVKT*QAWVGL
Trigger: GAGGCCTACCCAGGCCTGCAAGGTTTTAACTGGACC...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTCCAGACCTGCAGCACTaGGGCCTCATCACACCTATC +
Preference number: 5 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAPDLQH*GLITPI
Trigger: GATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTGG...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTACCAAACTGCAGGTaGTTCCGGGGGAACTCCCAC +
Preference number: 5 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSLPNCR*FRGNSH
Trigger: GTGGGAGTTCCCCCGGAACAACCTGCAGTTTGGTAA...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ATGCAATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGCGGTGGATGCAATTCTaGGAAGCGAGGAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: MQFLEARKAMPWATWLEKRWMQF*EARKAM
Trigger: CATGGCCTTCCTCGCTTCCAAGAATTGCATCCACCG...CTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504875.5
ENST00000515068.1
CDS-3UTR CAA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGAAGGTAGCGTTGTaGGTGCTGAGGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HPQLLAATWLITAVPVWGWKVAL*VLRMLL
Trigger: CAGCAGCATCCTCAGCACCAACAACGCTACCTTCCA...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGATTGCGAGCTTGGTGTaGTTGTGTTGGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEIASLV*LCWRKT
Trigger: TGTCTTCCTCCAACACAACAACACCAAGCTCGCAAT...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGCAGATTGTTGAGGGATaGCGAGCTTGGTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: PPLNPSPSQVSELGRAVEQIVEG*RAWCCC
Trigger: ACAACAACACCAAGCTCGCAATCCCTCAACAATCTG...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTAACCATGACTTTGAGGTaGAGCCCCTCCCCCACGGTC +
Preference number: 5 (lower is better)
Translates to: LSASLSSPKEPGFLSISVTMTLR*SPSPTV
Trigger: GACCGTGGGGGAGGGGCTCAACCTCAAAGTCATGGT...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AATTCTTGGAAGCGAGGAAGGCCATGCCCTGGGCTACTTGGCTGGAGAAGTGAATTACCAAACTGCAGGTaGTTCCGGGGGAACTCCCAC +
Preference number: 5 (lower is better)
Translates to: NSWKRGRPCPGLLGWRSELPNCR*FRGNSH
Trigger: GTGGGAGTTCCCCCGGAACAACCTGCAGTTTGGTAA...TTCACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGCGGTGGATGCAATTCTaGGAAGCGAGGAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: HPQLLAATWLITAVPVWGRWMQF*EARKAM
Trigger: CATGGCCTTCCTCGCTTCCAAGAATTGCATCCACCG...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGCTGGGCGATATCCCCTaGCTCGCAGCAGGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMLGDIP*LAAGQV
Trigger: CACCTGACCTGCTGCGAGCAAGGGGATATCGCCCAG...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTACCATCCATGGAGGAGTaGAAGTTTGTGGGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLPSMEE*KFVGGE
Trigger: CTCCCCTCCCACAAACTTCAACTCCTCCATGGATGG...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGGACCGAAGGCAGAGTTaGTATGTTCTCCCCGTGTCG +
Preference number: 5 (lower is better)
Translates to: HPQLLAATWLITAVPVWGDRRQS*YVLPVS
Trigger: CGACACGGGGAGAACATACAAACTCTGCCTTCGGTC...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTGGGCCGAGCTGTTGAGACTTTTAGCTGCCACTaGGCTCATTACAGCAGTACC +
Preference number: 5 (lower is better)
Translates to: PPLNPSPSQVSELGRAVETFSCH*AHYSST
Trigger: GGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGT...CTCAACAGCTCGGCCCAGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGAGAAGGAGTCATTTCTGCAATGCAGATTTaGAATCAGCAGGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LQGPSILLVQVLLREGVISAMQI*NQQAWV
Trigger: CACCCAGGCCTGCTGATTCAAAATCTGCATTGCAGA...AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS CCA 90 bp GAGGGTAAGGGAAAGCTCCTGGAGAGTGGCTCCTTAGCCAGGCCTTaGATAAACAAACTCCAGCAGAGATATCCTCAGCAGGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EGKGKLLESGSLARP*INKLQQRYPQQVSF
Trigger: GAAGGAGACCTGCTGAGGATATCTCTGCTGGAGTTTGTTTATCCAAGGCCTGGCTAAGGAGCCACTCTCCAGGAGCTTTCCCTTACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502660.5
CDS-3UTR CAA 90 bp CCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCCTCTGCACTGGCTGTTaGTCTTGTTTTCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PEVPNLGHMTIGQQHVTRLCTGC*SCFPLP
Trigger: AGGAAGAGGAAAACAAGACAAACAGCCAGTGCAGAG...GCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGCATTCCACGCTGCCATaGCCCACACATCGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGHSTLP*PTHRKV
Trigger: GACCTTGCGATGTGTGGGCAATGGCAGCGTGGAATG...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GCCCGAAGTCCCCAATCTTGGCCACATGACCATTGGTCAACAGCACGTTACGCGCAGATTGTTGAGGGATaGCGAGCTTGGTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: ARSPQSWPHDHWSTARYAQIVEG*RAWCCC
Trigger: ACAACAACACCAAGCTCGCAATCCCTCAACAATCTG...CGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGATTGGGGACTTCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGGGTCCAGTTAAAACCTaGCAGGCCTGGGTAGGCCTC +
Preference number: 5 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGGPVKT*QAWVGL
Trigger: GAGGCCTACCCAGGCCTGCAAGGTTTTAACTGGACC...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGAGGGTGCCAGAGCCGTaGATGAATGTCCATATGACG +
Preference number: 5 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGRVPEP*MNVHMT
Trigger: CGTCATATGGACATTCATCAACGGCTCTGGCACCCT...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACATGCAGCCATGTCACGTaGGGCTGGGGGTACCCAGAG +
Preference number: 5 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTCSHVT*GWGYPE
Trigger: CTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCA...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACTCTGCACCGTCACCTaGTGGAAGGGCTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTLCTVT*WKGSWL
Trigger: GAGCCAGGAGCCCTTCCACAAGGTGACGGTGCAGAG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CGCTTCTGCTGCTGCTCGGCAGATTGGTATAGTCCCGCTCTCTCCTGTCCTCTTACTTTTAGCTGCCACTaGGCTCATTACAGCAGTACC +
Preference number: 5 (lower is better)
Translates to: RFCCCSADWYSPALSCPLTFSCH*AHYSST
Trigger: GGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGT...AAGAGGACAGGAGAGAGCGGGACTATACCAATCTGCCGAGCAGCAGCAGAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp AAGTTTGTGGGAGGGGAGAGTGGTACTCCCTGTCGTCAACTCCTCAGCAGAACTTTTTGGAAGGTAGCGTaGTTGGTGCTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: KFVGGESGTPCRQLLSRTFWKVA*LVLRML
Trigger: CAGCATCCTCAGCACCAACAACGCTACCTTCCAAAA...AGTTCTGCTGAGGAGTTGACGACAGGGAGTACCACTCTCCCCTCCCACAAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTTTTTGGAAGGTAGCGTaGTTGGTGCTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAFWKVA*LVLRML
Trigger: CAGCATCCTCAGCACCAACAACGCTACCTTCCAAAA...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTCATCAGGGCACTGCATaGATAGTCCTGGCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAHQGTA*IVLALN
Trigger: ATTCAGAGCCAGGACTATCAATGCAGTGCCCTGATG...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGAGAAGGAGTCATTATGTTGGAAATCTACTaGATCGAGGTTGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: LQGPSILLVQVLLREGVIMLEIY*IEVEGQ
Trigger: CTGACCCTCAACCTCGATCAAGTAGATTTCCAACAT...AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGCCTCCACCATGACTTaGAGGTTGAGCCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKASTMT*RLSPSP
Trigger: GGGGGAGGGGCTCAACCTCAAAGTCATGGTGGAGGC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CAGAGACTAAGAGGTCCTGTGAGATTCTTAGAGGAGCCATCCTGCTCCAAGGGGTGCCTGTATGTGTCCTaGGTGGTAGCATTAGCAAGC +
Preference number: 5 (lower is better)
Translates to: QRLRGPVRFLEEPSCSKGCLYVS*VVALAS
Trigger: GCTTGCTAATGCTACCACCAAGGACACATACAGGCA...CCCCTTGGAGCAGGATGGCTCCTCTAAGAATCTCACAGGACCTCTTAGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGCCTGTATGTGTCCTaGGTGGTAGCATTAGCAAGC +
Preference number: 5 (lower is better)
Translates to: HPQLLAATWLITAVPVWGCLYVS*VVALAS
Trigger: GCTTGCTAATGCTACCACCAAGGACACATACAGGCA...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGAGGGTGCCAGAGCCGTaGATGAATGTCCATATGACG +
Preference number: 5 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGRVPEP*MNVHMT
Trigger: CGTCATATGGACATTCATCAACGGCTCTGGCACCCT...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCATGCAGCCATGTCACGTaGGGCTGGGGGTACCCAGAG +
Preference number: 5 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPCSHVT*GWGYPE
Trigger: CTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCA...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGACAGCGGACCTGGTACTaGGGCTTCTGCTTATACTTG +
Preference number: 5 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGQRTWY*GFCLYL
Trigger: CAAGTATAAGCAGAAGCCCAAGTACCAGGTCCGCTG...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTGCTGTATATATTCTTaGGGGCAAATGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSCCIYS*GQMQAG
Trigger: CCCAGCCTGCATTTGCCCCAAAGAATATATACAGCA...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACATTCCACGCTGCCATaGCCCACACATCGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTHSTLP*PTHRKV
Trigger: GACCTTGCGATGTGTGGGCAATGGCAGCGTGGAATG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGCGAGCTTGGTGTTGTaGTGTTGGAGGAAGACATCA +
Preference number: 5 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGASLVL*CWRKTS
Trigger: TGATGTCTTCCTCCAACACAACAACACCAAGCTCGC...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTTTCAGAGCTATTGCGAGCTTGGTGTaGTTGTGTTGGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: KWDPLTSPESLTFPSFRAIASLV*LCWRKT
Trigger: TGTCTTCCTCCAACACAACAACACCAAGCTCGCAAT...AGCTCTGAAACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGCAGATTGTTGAGGGATaGCGAGCTTGGTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: HPQLLAATWLITAVPVWGQIVEG*RAWCCC
Trigger: ACAACAACACCAAGCTCGCAATCCCTCAACAATCTG...CCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ATGCTCAGGAAGTGGGATCCTCTGACCTCCCCTGAATCCCTCACCTTCCCAAGTATGAAAGTCAGATTGTaGAGGGATTGCGAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: MLRKWDPLTSPESLTFPSMKVRL*RDCELG
Trigger: ACCAAGCTCGCAATCCCTCAACAATCTGACTTTCAT...ACTTGGGAAGGTGAGGGATTCAGGGGAGGTCAGAGGATCCCACTTCCTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GCTCCAGGGGCCGTCCATCCTCCTTGTCCAGGTCTTGCTCAGAGAAGGAGTCATGAGGGTCAGGACTTTTaGGTAACGGTTATTATGAAA +
Preference number: 5 (lower is better)
Translates to: APGAVHPPCPGLAQRRSHEGQDF*VTVIMK
Trigger: TTTCATAATAACCGTTACCAAAAAGTCCTGACCCTC...ATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAGGATGGACGGCCCCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS-3UTR CAA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACAGGCTCCCAGAAGGTaGACGATGTTCTCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTQAPRR*TMFSCW
Trigger: CCAGCACGAGAACATCGTCAACCTTCTGGGAGCCTG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGTGGGACTCCTTGTCCAGGTCTaGCTCAGAGAAGGAGTCATT +
Preference number: 5 (lower is better)
Translates to: PTFSCHLAHYSSTSMGVGLLVQV*LREGVI
Trigger: AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAG...TCCCACCCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTATGCTGTATATATTCTTaGGGGCAAATGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLCCIYS*GQMQAG
Trigger: CCCAGCCTGCATTTGCCCCAAAGAATATATACAGCA...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGATCGCAAGGTCACCGTaGCTCCTGGCTTCACGACCA +
Preference number: 5 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKIARSP*LLASRP
Trigger: TGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGAT...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATATCGCAAGGTCACCGTaGCTCCTGGCTTCACGACCA +
Preference number: 5 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHIARSP*LLASRP
Trigger: TGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGAT...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTAGCGAGCTTGGTGTTGTaGTGTTGGAGGAAGACATCA +
Preference number: 5 (lower is better)
Translates to: LSASLSSPKEPGFLSISVASLVL*CWRKTS
Trigger: TGATGTCTTCCTCCAACACAACAACACCAAGCTCGC...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGCATCTGCTGCTCCTCTCAGAGAGGGAGATCTCACTCTCTGCCAGTCTGTCTAATGTTGGAAATCTACTaGATCGAGGTTGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: SICCSSQRGRSHSLPVCLMLEIY*IEVEGQ
Trigger: CTGACCCTCAACCTCGATCAAGTAGATTTCCAACAT...TAGACAGACTGGCAGAGAGTGAGATCTCCCTCTCTGAGAGGAGCAGCAGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGCCAGACCTGCAGCACTaGGGCCTCATCACACCTATC +
Preference number: 5 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRPDLQH*GLITPI
Trigger: GATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTGG...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCACCAGACCTGCAGCACTaGGGCCTCATCACACCTATC +
Preference number: 5 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPPDLQH*GLITPI
Trigger: GATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTGG...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGCAGGCTCCCAGAAGGTaGACGATGTTCTCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRQAPRR*TMFSCW
Trigger: CCAGCACGAGAACATCGTCAACCTTCTGGGAGCCTG...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACACAGGCTCCCAGAAGGTaGACGATGTTCTCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTQAPRR*TMFSCW
Trigger: CCAGCACGAGAACATCGTCAACCTTCTGGGAGCCTG...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACGGTGGATGCAATTCTaGGAAGCGAGGAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTRWMQF*EARKAM
Trigger: CATGGCCTTCCTCGCTTCCAAGAATTGCATCCACCG...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAGCTGGGCCGAGCTGTaGAGTGAAATGACCGAAGGC +
Preference number: 5 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRSWAEL*SEMTEG
Trigger: GCCTTCGGTCATTTCACTCAACAGCTCGGCCCAGCT...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTTTGTGCTTCCTGCTaGGTGTGGCCAGCCACATGC +
Preference number: 5 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTVCASC*VWPATC
Trigger: GCATGTGGCTGGCCACACCAAGCAGGAAGCACAAAC...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTACTCTGCACTGGCTGTTaGTCTTGTTTTCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LSASLSSPKEPGFLSISVLCTGC*SCFPLP
Trigger: AGGAAGAGGAAAACAAGACAAACAGCCAGTGCAGAG...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286301.7
ENST00000504875.5
CDS-3UTR CAA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGATAGGTCCCCGTGTTTaGGAAGGTAGCGTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMIGPRV*EGSVVG
Trigger: ACCAACAACGCTACCTTCCAAAACACGGGGACCTAT...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGACCGAAGGCAGAGTTaGTATGTTCTCCCCGTGTCG +
Preference number: 5 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTDRRQS*YVLPVS
Trigger: CGACACGGGGAGAACATACAAACTCTGCCTTCGGTC...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCAGCTGGGCCGAGCTGTaGAGTGAAATGACCGAAGGC +
Preference number: 5 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGSWAEL*SEMTEG
Trigger: GCCTTCGGTCATTTCACTCAACAGCTCGGCCCAGCT...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CTCTCTGCCAGTCTGTCTAGCCCCAAAGAGCCTGGTTTTCTCAGTATCAGTGTAATGAAAGTCAGATTGTaGAGGGATTGCGAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: LSASLSSPKEPGFLSISVMKVRL*RDCELG
Trigger: ACCAAGCTCGCAATCCCTCAACAATCTGACTTTCAT...TACACTGATACTGAGAAAACCAGGCTCTTTGGGGCTAGACAGACTGGCAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GCAGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTAATGAAAGTCAGATTGTaGAGGGATTGCGAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: AEHPQLLAATWLITAVPVMKVRL*RDCELG
Trigger: ACCAAGCTCGCAATCCCTCAACAATCTGACTTTCAT...TACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAAGGGTGCCAGAGCCGTaGATGAATGTCCATATGACG +
Preference number: 5 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTRVPEP*MNVHMT
Trigger: CGTCATATGGACATTCATCAACGGCTCTGGCACCCT...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCTTACCAAACTGCAGGTaGTTCCGGGGGAACTCCCAC +
Preference number: 5 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGLPNCR*FRGNSH
Trigger: GTGGGAGTTCCCCCGGAACAACCTGCAGTTTGGTAA...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTAGGACAGCATCCTCCTaGCCCAGACCAAAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVRTASS*PRPKAV
Trigger: CACGGCCTTTGGTCTGGGCAAGGAGGATGCTGTCCT...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS TCA 90 bp CCTCACAGTAACCCTTGCAGAAGGGTACTCTCATCACCCTCATTCTaGCAGATGAGGCCATTTTGGTATCCTCAGGGTAACTGTAATAAC +
Preference number: 5 (lower is better)
Translates to: PHSNPCRRVLSSPSF*QMRPFWYPQGNCNN
Trigger: GTTATTACAGTTACCCTGAGGATACCAAAATGGCCTCATCTGTCAGAATGAGGGTGATGAGAGTACCCTTCTGCAAGGGTTACTGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509861.1
CDS-3UTR CAA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCACATCAGGGCACTGCATaGATAGTCCTGGCTCTGAAT +
Preference number: 5 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPHQGTA*IVLALN
Trigger: ATTCAGAGCCAGGACTATCAATGCAGTGCCCTGATG...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGGGGAGGGTCAGGACTTTTaGGTAACGGTTATTATGAAA +
Preference number: 5 (lower is better)
Translates to: TPPTFSCHLAHYSSTSMGEGQDF*VTVIMK
Trigger: TTTCATAATAACCGTTACCAAAAAGTCCTGACCCTC...CCCCATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATCTCCTTGTCCAGGTCTaGCTCAGAGAAGGAGTCATT +
Preference number: 5 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHLLVQV*LREGVI
Trigger: AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAG...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS TCA 90 bp GTAACCCTTGCAGAAGGGTACTCTCATCACCCTCATTCTGACAGATaGGGCCATTTTGGTATCCTCAGGGTAACTGTAATAACGATCTCT +
Preference number: 5 (lower is better)
Translates to: VTLAEGYSHHPHSDR*GHFGILRVTVITIS
Trigger: AGAGATCGTTATTACAGTTACCCTGAGGATACCAAAATGGCCTCATCTGTCAGAATGAGGGTGATGAGAGTACCCTTCTGCAAGGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509861.1
CDS-3UTR CAA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTCGTGCTCTCACGCTTTaGGACACTCTGTCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVRALTL*DTLSAL
Trigger: AAGGGCAGACAGAGTGTCCAAAAGCGTGAGAGCACG...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286301.7
CDS-3UTR CAA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATATGGAAGGTAGCGTTGTaGGTGCTGAGGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIWKVAL*VLRMLL
Trigger: CAGCAGCATCCTCAGCACCAACAACGCTACCTTCCA...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCTTTTGGAAGGTAGCGTaGTTGGTGCTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGFWKVA*LVLRML
Trigger: CAGCATCCTCAGCACCAACAACGCTACCTTCCAAAA...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGGTCCCCGTGTTTaGGAAGGTAGCGTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGIGPRV*EGSVVG
Trigger: ACCAACAACGCTACCTTCCAAAACACGGGGACCTAT...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAATTGCGAGCTTGGTGTaGTTGTGTTGGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: KEGSTSWHSKHEANTMRTIASLV*LCWRKT
Trigger: TGTCTTCCTCCAACACAACAACACCAAGCTCGCAAT...TGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACACCATGAGAACAGTAGGGATTATGAAAGTCAGATaGTTGAGGGATTGCGAGCTT +
Preference number: 5 (lower is better)
Translates to: GSTSWHSKHEANTMRTVGIMKVR*LRDCEL
Trigger: AAGCTCGCAATCCCTCAACAATCTGACTTTCATAAT...CCCTACTGTTCTCATGGTGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAACAATGTTGGAAATCTACTaGATCGAGGTTGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: RGLGKKVLLVGIANTRPTMLEIY*IEVEGQ
Trigger: CTGACCCTCAACCTCGATCAAGTAGATTTCCAACAT...TGTTGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGTAGTTGCCGGCATGTaGGAAATCTACTTGATCGAG +
Preference number: 5 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHVVAGM*EIYLIE
Trigger: CTCGATCAAGTAGATTTCCAACATGCCGGCAACTAC...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGTAGTTGCCGGCATGTaGGAAATCTACTTGATCGAG +
Preference number: 5 (lower is better)
Translates to: VAPGDFIGIKSVHFHEDKVVAGM*EIYLIE
Trigger: CTCGATCAAGTAGATTTCCAACATGCCGGCAACTAC...CTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp CAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCCTCCTTGTCCAGGTCTaGCTCAGAGAAGGAGTCATT +
Preference number: 5 (lower is better)
Translates to: QSISMKIRGLGKKVLLVGLLVQV*LREGVI
Trigger: AATGACTCCTTCTCTGAGCAAGACCTGGACAAGGAG...GCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp GGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGTGCTGTATATATTCTTaGGGGCAAATGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GDFIGIKSVHFHEDKGIRCCIYS*GQMQAG
Trigger: CCCAGCCTGCATTTGCCCCAAAGAATATATACAGCA...CCTAATCCCCTTATCTTCATGGAAATGGACTGACTTTATGCCTATGAAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTCCATCCATGGAGGAGTaGAAGTTTGTGGGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVPSMEE*KFVGGE
Trigger: CTCCCCTCCCACAAACTTCAACTCCTCCATGGATGG...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS TCA 90 bp CGCAGGAGTAGTTGCCGGCATGTTGGAAATCTACTTGATCGAGGTTaGGGGTCAGGACTTTTTGGTAACGGTTATTATGAAAGTCAGATT +
Preference number: 5 (lower is better)
Translates to: RRSSCRHVGNLLDRG*GSGLFGNGYYESQI
Trigger: AATCTGACTTTCATAATAACCGTTACCAAAAAGTCCTGACCCTCAACCTCGATCAAGTAGATTTCCAACATGCCGGCAACTACTCCTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS-3UTR CAA 90 bp AGAACACCCCCAACTTTTAGCTGCCACTTGGCTCATTACAGCAGTACCAGTATGGAGGGTCAGGACTTTTaGGTAACGGTTATTATGAAA +
Preference number: 5 (lower is better)
Translates to: RTPPTFSCHLAHYSSTSMEGQDF*VTVIMK
Trigger: TTTCATAATAACCGTTACCAAAAAGTCCTGACCCTC...CATACTGGTACTGCTGTAATGAGCCAAGTGGCAGCTAAAAGTTGGGGGTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGTCAGTCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTCAGCGGACCTGGTACTaGGGCTTCTGCTTATACTTG +
Preference number: 5 (lower is better)
Translates to: SQSISMKIRGLGKKVLLVQRTWY*GFCLYL
Trigger: CAAGTATAAGCAGAAGCCCAAGTACCAGGTCCGCTG...AACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGACTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp TCCATTTCCATGAAGATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAATAGGTCCCCGTGTTTaGGAAGGTAGCGTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: SISMKIRGLGKKVLLVGIIGPRV*EGSVVG
Trigger: ACCAACAACGCTACCTTCCAAAACACGGGGACCTAT...TATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTATCTTCATGGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp AGTATCAGTGTAGCTCCTGGGGACTTCATAGGCATAAAGTCAGTCCATTTCCATATTATGAAAGTCAGATaGTTGAGGGATTGCGAGCTT +
Preference number: 5 (lower is better)
Translates to: SISVAPGDFIGIKSVHFHIMKVR*LRDCEL
Trigger: AAGCTCGCAATCCCTCAACAATCTGACTTTCATAAT...ATGGAAATGGACTGACTTTATGCCTATGAAGTCCCCAGGAGCTACACTGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS-3UTR CAA 90 bp ATAAGGGGATTAGGAAAGAAGGTTCTACTAGTTGGCATAGCAAACACGAGGCCAATTATGAAAGTCAGATaGTTGAGGGATTGCGAGCTT +
Preference number: 5 (lower is better)
Translates to: IRGLGKKVLLVGIANTRPIMKVR*LRDCEL
Trigger: AAGCTCGCAATCCCTCAACAATCTGACTTTCATAAT...TGGCCTCGTGTTTGCTATGCCAACTAGTAGAACCTTCTTTCCTAATCCCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS GCA 72 bp GAGGGGCCGGCCACGCACACGCACCAGCGAGACGCCTaGTTCCAGCACCGGGTCTGTGAGCAGACAGGGCAG +
Preference number: 6 (lower is better)
Translates to: EGPATHTHQRDA*FQHRVCEQTGQ
Trigger: CTGCCCTGTCTGCTCACAGACCCGGTGCTGGAAGCAGGCGTCTCGCTGGTGCGTGTGCGTGGCCGGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS TCA 72 bp CCGGGGGATGCGTGTGGGCTCCTGCAGAGATGGGTATaGAGGCCCAGGAGCCACTCCCCACGCTGTTGTGGG +
Preference number: 6 (lower is better)
Translates to: PGDACGLLQRWV*RPRSHSPRCCG
Trigger: CCCACAACAGCGTGGGGAGTGGCTCCTGGGCCTTCATACCCATCTCTGCAGGAGCCCACACGCATCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS GCA 72 bp GATCTGGGCAGCCTCCCCTCGAATCCGCACCAGCTCTaGAGGCACCAGTGTCAAGGCTGGGGGCCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: DLGSLPSNPHQL*RHQCQGWGPWD
Trigger: ATCCCAGGGCCCCCAGCCTTGACACTGGTGCCTGCAGAGCTGGTGCGGATTCGAGGGGAGGCTGCCCAGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CCA 72 bp TCCCTGGGCACCAAAGGGCCTCTGTCCAAGGGCCCATaGGCTCCCTGCAACCCCCACAGGCCCTGTGATAGG +
Preference number: 6 (lower is better)
Translates to: SLGTKGPLSKGP*APCNPHRPCDR
Trigger: CCTATCACAGGGCCTGTGGGGGTTGCAGGGAGCCCATGGGCCCTTGGACAGAGGCCCTTTGGTGCCCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513609.1
CDS TCA 72 bp GCACCAGCGAGACGCCTGCTTCCAGCACCGGGTCTGTaGGCAGACAGGGCAGTAGTGCGTCCTGGTCCTCGA +
Preference number: 6 (lower is better)
Translates to: APARRLLPAPGL*ADRAVVRPGPR
Trigger: TCGAGGACCAGGACGCACTACTGCCCTGTCTGCTCACAGACCCGGTGCTGGAAGCAGGCGTCTCGCTGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS GCA 72 bp ACCAAAGGGCCTCTGTCCAAGGGCCCATGGGCTCCCTaGAACCCCCACAGGCCCTGTGATAGGAAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: TKGPLSKGPWAP*NPHRPCDRKLW
Trigger: CCACAGCTTCCTATCACAGGGCCTGTGGGGGTTGCAGGGAGCCCATGGGCCCTTGGACAGAGGCCCTTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513609.1
CDS CCA 72 bp CCGTTGCTCCTGGCTTCACGACCAGCTCAGGGACACTaGGCTCTATCACTGGGATTCCCTGACCCTGGCCGC +
Preference number: 6 (lower is better)
Translates to: PLLLASRPAQGH*ALSLGFPDPGR
Trigger: GCGGCCAGGGTCAGGGAATCCCAGTGATAGAGCCCAGTGTCCCTGAGCTGGTCGTGAAGCCAGGAGCAACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511344.1
CDS GCA 72 bp CACGCTGCCATTGCCCACACATCGCAAGGTCACCGTTaGTCCTGGCTTCACGACCAGCTCAGGGACACTGGG +
Preference number: 6 (lower is better)
Translates to: HAAIAHTSQGHR*SWLHDQLRDTG
Trigger: CCCAGTGTCCCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGATGTGTGGGCAATGGCAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS GCA 72 bp CACCTTCCCAAAGGCTCCAGCTCCGAGGGTCTTACCTaGCACGCACACAGGTCCCTTAAGTCCCTGGGCACC +
Preference number: 6 (lower is better)
Translates to: HLPKGSSSEGLT*HAHRSLKSLGT
Trigger: GGTGCCCAGGGACTTAAGGGACCTGTGTGCGTGGCAGGTAAGACCCTCGGAGCTGGAGCCTTTGGGAAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513609.1
CDS CCA 72 bp GTGTGGCCACTGCACTGCAGCCATGTCACGTTGGGCTaGGGGTACCCAGAGGCAGCACACAAAAGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: VWPLHCSHVTLG*GYPEAAHKRVP
Trigger: TGGCACCCTTTTGTGTGCTGCCTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCAGTGCAGTGGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 72 bp GTGAAGGTGTGCCTACCACCCGGAAGAACATGGAGGTaGAGTGCTTGCCCTGCACGTTGCTGGCCACGCAGG +
Preference number: 6 (lower is better)
Translates to: VKVCLPPGRTWR*SACPARCWPRR
Trigger: CCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAGGCACACCTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543093.1
CDS CAA 72 bp CCACGCTGCCATTGCCCACACATCGCAAGGTCACCGTaGCTCCTGGCTTCACGACCAGCTCAGGGACACTGG +
Preference number: 6 (lower is better)
Translates to: PRCHCPHIARSP*LLASRPAQGHW
Trigger: CCAGTGTCCCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGATGTGTGGGCAATGGCAGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS GCA 72 bp TGGGCCTCATCACACCTATCAGTGTGGCCACTGCACTaGAGCCATGTCACGTTGGGCTGGGGGTACCCAGAG +
Preference number: 6 (lower is better)
Translates to: WASSHLSVWPLH*SHVTLGWGYPE
Trigger: CTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCAGTGCAGTGGCCACACTGATAGGTGTGATGAGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS GCA 72 bp GCACTTGGGCCTCATCACACCTATCAGTGTGGCCACTaGACTGCAGCCATGTCACGTTGGGCTGGGGGTACC +
Preference number: 6 (lower is better)
Translates to: ALGPHHTYQCGH*TAAMSRWAGGT
Trigger: GGTACCCCCAGCCCAACGTGACATGGCTGCAGTGCAGTGGCCACACTGATAGGTGTGATGAGGCCCAAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS GCA 72 bp TGCCTACCACCCGGAAGAACATGGAGGTGGAGTGCTTaGCCTGCACGTTGCTGGCCACGCAGGAGTAGTTGC +
Preference number: 6 (lower is better)
Translates to: CLPPGRTWRWSA*PARCWPRRSSC
Trigger: GCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543093.1
CDS CCA 72 bp AATCCGCACCAGCTCTGCAGGCACCAGTGTCAAGGCTaGGGGCCCTGGGATGACTTTCTGCACTTTCAGCCG +
Preference number: 6 (lower is better)
Translates to: NPHQLCRHQCQG*GPWDDFLHFQP
Trigger: CGGCTGAAAGTGCAGAAAGTCATCCCAGGGCCCCCAGCCTTGACACTGGTGCCTGCAGAGCTGGTGCGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CCA 72 bp AAGGGTGAGCTCAAACGTCAGAGCTCTCCAGCCTCCTaGGTTTCTGGCCAGGAAGGAGTAGCGGCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: KGELKRQSSPAS*VSGQEGVAASL
Trigger: GAGGCTGGCCGCTACTCCTTCCTGGCCAGAAACCCAGGAGGCTGGAGAGCTCTGACGTTTGAGCTCACCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 72 bp CTTGTGGAAGGGCTCCTGGCTCAGGACCTCAGGGTATaGGTCATCCCAGACCTGCAGCACTTGGGCCTCATC +
Preference number: 6 (lower is better)
Translates to: LVEGLLAQDLRV*VIPDLQHLGLI
Trigger: GATGAGGCCCAAGTGCTGCAGGTCTGGGATGACCCATACCCTGAGGTCCTGAGCCAGGAGCCCTTCCACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 72 bp CCTGATGCTTACCTACCACCCGGAAGAACATGGAGGTaGAGTGCTTGCCCTGCACGTTGCTGGCCACGCAGG +
Preference number: 6 (lower is better)
Translates to: PDAYLPPGRTWR*SACPARCWPRR
Trigger: CCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAGGTAAGCATCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502660.5
CDS CCA 72 bp CAGGCCTCATCTCCACATAGGTGTCCACACCCTGGCTaGAGAAGCCACTGTCCCTCCATGGGTACAGGCTCC +
Preference number: 6 (lower is better)
Translates to: QASSPHRCPHPG*RSHCPSMGTGS
Trigger: GGAGCCTGTACCCATGGAGGGACAGTGGCTTCTCCAGCCAGGGTGTGGACACCTATGTGGAGATGAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504875.5
CDS CAA 90 bp TCCCAGGGGGTCTCCAGGCTCAGTGCAGCGATAGGTCCCCGTGTTTaGGAAGGTAGCGTTGTTGGTGCTGAGGATGCTGCTGGAGCCATC +
Preference number: 6 (lower is better)
Translates to: SQGVSRLSAAIGPRV*EGSVVGAEDAAGAI
Trigger: GATGGCTCCAGCAGCATCCTCAGCACCAACAACGCTACCTTCCAAAACACGGGGACCTATCGCTGCACTGAGCCTGGAGACCCCCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS GCA 72 bp GGAAGAACATGGAGGTGGAGTGCTTGCCCTGCACGTTaGTGGCCACGCAGGAGTAGTTGCCGGCATGTTGGA +
Preference number: 6 (lower is better)
Translates to: GRTWRWSACPAR*WPRRSSCRHVG
Trigger: TCCAACATGCCGGCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS GCA 72 bp TCTCTACCACCCGGAAGAACATGGAGGTGGAGTGCTTaGCCTGCACGTTGCTGGCCACGCAGGAGTAGTTGC +
Preference number: 6 (lower is better)
Translates to: SLPPGRTWRWSA*PARCWPRRSSC
Trigger: GCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS GCA 72 bp AGGCCCAGGAGCCACTCCCCACGCTGTTGTGGGCCCTaGACTCGTAGGTTTGGTTGTGCTCTAAGGTCTCAA +
Preference number: 6 (lower is better)
Translates to: RPRSHSPRCCGP*TRRFGCALRSQ
Trigger: TTGAGACCTTAGAGCACAACCAAACCTACGAGTGCAGGGCCCACAACAGCGTGGGGAGTGGCTCCTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS GCA 72 bp TACCTACCACCCGGAAGAACATGGAGGTGGAGTGCTTaGCCTGCACGTTGCTGGCCACGCAGGAGTAGTTGC +
Preference number: 6 (lower is better)
Translates to: YLPPGRTWRWSA*PARCWPRRSSC
Trigger: GCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCTTCCGGGTGGTAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502660.5
CDS CCA 72 bp CCGTTGCTCCTGGCTTCACGACCAGCTCAGGGACACTaGGCTCTATCACTGGGATTCCCTGACCATGCCAAG +
Preference number: 6 (lower is better)
Translates to: PLLLASRPAQGH*ALSLGFPDHAK
Trigger: CTTGGCATGGTCAGGGAATCCCAGTGATAGAGCCCAGTGTCCCTGAGCTGGTCGTGAAGCCAGGAGCAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CCA 72 bp TATCAGTGTGGCCACTGCACTGCAGCCATGTCACGTTaGGCTGGGGGTACCCAGAGGCAGCACACAAAAGGG +
Preference number: 6 (lower is better)
Translates to: YQCGHCTAAMSR*AGGTQRQHTKG
Trigger: CCCTTTTGTGTGCTGCCTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCAGTGCAGTGGCCACACTGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CAA 72 bp CTATCAGTGTGGCCACTGCACTGCAGCCATGTCACGTaGGGCTGGGGGTACCCAGAGGCAGCACACAAAAGG +
Preference number: 6 (lower is better)
Translates to: LSVWPLHCSHVT*GWGYPEAAHKR
Trigger: CCTTTTGTGTGCTGCCTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCAGTGCAGTGGCCACACTGATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CAA 90 bp CATCCCATTCCACGCTGCCATTGCCCACACATCGCAAGGTCACCGTaGCTCCTGGCTTCACGACCAGCTCAGGGACACTGGGCTCTATCA +
Preference number: 6 (lower is better)
Translates to: HPIPRCHCPHIARSP*LLASRPAQGHWALS
Trigger: TGATAGAGCCCAGTGTCCCTGAGCTGGTCGTGAAGCCAGGAGCAACGGTGACCTTGCGATGTGTGGGCAATGGCAGCGTGGAATGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS CAA 90 bp TCATCACACCTATCAGTGTGGCCACTGCACTGCAGCCATGTCACGTaGGGCTGGGGGTACCCAGAGGCAGCACACAAAAGGGTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: SSHLSVWPLHCSHVT*GWGYPEAAHKRVPE
Trigger: CTCTGGCACCCTTTTGTGTGCTGCCTCTGGGTACCCCCAGCCCAACGTGACATGGCTGCAGTGCAGTGGCCACACTGATAGGTGTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CAA 90 bp TTGTGCTCTAAGGTCTCAACAGTCAGCAGGCTCTGCACCGTCACCTaGTGGAAGGGCTCCTGGCTCAGGACCTCAGGGTATGGGTCATCC +
Preference number: 6 (lower is better)
Translates to: LCSKVSTVSRLCTVT*WKGSWLRTSGYGSS
Trigger: GGATGACCCATACCCTGAGGTCCTGAGCCAGGAGCCCTTCCACAAGGTGACGGTGCAGAGCCTGCTGACTGTTGAGACCTTAGAGCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS GCA 72 bp TGGCTCAGGACCTCAGGGTATGGGTCATCCCAGACCTaGAGCACTTGGGCCTCATCACACCTATCAGTGTGG +
Preference number: 6 (lower is better)
Translates to: WLRTSGYGSSQT*STWASSHLSVW
Trigger: CCACACTGATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTGGGATGACCCATACCCTGAGGTCCTGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 72 bp AAGTTAACATCAACGCTGCTGGCTGAGCACACGATCTaGGCAGCCTCCCCTCGAATCCGCACCAGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: KLTSTLLAEHTI*AASPRIRTSSA
Trigger: TGCAGAGCTGGTGCGGATTCGAGGGGAGGCTGCCCAGATCGTGTGCTCAGCCAGCAGCGTTGATGTTAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CCA 72 bp ACCTCAGGGTATGGGTCATCCCAGACCTGCAGCACTTaGGCCTCATCACACCTATCAGTGTGGCCACTGCAC +
Preference number: 6 (lower is better)
Translates to: TSGYGSSQTCST*ASSHLSVWPLH
Trigger: GTGCAGTGGCCACACTGATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTGGGATGACCCATACCCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 72 bp CCCTGCAACCCCCACAGGCCCTGTGATAGGAAGCTGTaGAGTGATGAGCTGCCATCTCACCAAACTGCAGGT +
Preference number: 6 (lower is better)
Translates to: PCNPHRPCDRKL*SDELPSHQTAG
Trigger: ACCTGCAGTTTGGTGAGATGGCAGCTCATCACTCCACAGCTTCCTATCACAGGGCCTGTGGGGGTTGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513609.1
CDS CAA 72 bp GACCTCAGGGTATGGGTCATCCCAGACCTGCAGCACTaGGGCCTCATCACACCTATCAGTGTGGCCACTGCA +
Preference number: 6 (lower is better)
Translates to: DLRVWVIPDLQH*GLITPISVATA
Trigger: TGCAGTGGCCACACTGATAGGTGTGATGAGGCCCAAGTGCTGCAGGTCTGGGATGACCCATACCCTGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CAA 72 bp AAGGTCTCAACAGTCAGCAGGCTCTGCACCGTCACCTaGTGGAAGGGCTCCTGGCTCAGGACCTCAGGGTAT +
Preference number: 6 (lower is better)
Translates to: KVSTVSRLCTVT*WKGSWLRTSGY
Trigger: ATACCCTGAGGTCCTGAGCCAGGAGCCCTTCCACAAGGTGACGGTGCAGAGCCTGCTGACTGTTGAGACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CCA 72 bp AGAACATGGAGGTGGAGTGCTTGCCCTGCACGTTGCTaGCCACGCAGGAGTAGTTGCCGGCATGTTGGAAAT +
Preference number: 6 (lower is better)
Translates to: RTWRWSACPARC*PRRSSCRHVGN
Trigger: ATTTCCAACATGCCGGCAACTACTCCTGCGTGGCCAGCAACGTGCAGGGCAAGCACTCCACCTCCATGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CAA 72 bp GTCTCCAGGCTCAGTGCAGCGATAGGTCCCCGTGTTTaGGAAGGTAGCGTTGTTGGTGCTGAGGATGCTGCT +
Preference number: 6 (lower is better)
Translates to: VSRLSAAIGPRV*EGSVVGAEDAA
Trigger: AGCAGCATCCTCAGCACCAACAACGCTACCTTCCAAAACACGGGGACCTATCGCTGCACTGAGCCTGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS TCA 72 bp GCAGATTTTGAATCAGCAGGCCTGGGTGGATGGGCCTaGGGTGGTGCACTTCCAACAGTCCTCAAGAGATGC +
Preference number: 6 (lower is better)
Translates to: ADFESAGLGGWA*GGALPTVLKRC
Trigger: GCATCTCTTGAGGACTGTTGGAAGTGCACCACCTCAGGCCCATCCACCCAGGCCTGCTGATTCAAAATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS CCA 72 bp TGGTGCACTTCCAACAGTCCTCAAGAGATGCCTCCATaGGTACAGGCTCCCAGAAGGTTGACGATGTTCTCG +
Preference number: 6 (lower is better)
Translates to: WCTSNSPQEMPP*VQAPRRLTMFS
Trigger: CGAGAACATCGTCAACCTTCTGGGAGCCTGTACCCATGGAGGCATCTCTTGAGGACTGTTGGAAGTGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515068.1
CDS CAA 72 bp GTCAGAAAAGGGTCCCAGGTAGGTCCAGTTAAAACCTaGCAGGCCTGGGTAGGCCTCCACCATGACTTTGAG +
Preference number: 6 (lower is better)
Translates to: VRKGSQVGPVKT*QAWVGLHHDFE
Trigger: CTCAAAGTCATGGTGGAGGCCTACCCAGGCCTGCAAGGTTTTAACTGGACCTACCTGGGACCCTTTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CAA 90 bp GATGCTGATGGACATCACCTTCCTGCCACCCATCAGGGCACTGCATaGATAGTCCTGGCTCTGAATGAACTTGGCCCTGTGGATGGTGAA +
Preference number: 6 (lower is better)
Translates to: DADGHHLPATHQGTA*IVLALNELGPVDGE
Trigger: TTCACCATCCACAGGGCCAAGTTCATTCAGAGCCAGGACTATCAATGCAGTGCCCTGATGGGTGGCAGGAAGGTGATGTCCATCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000511344.1
ENST00000543093.1
ENST00000675795.1
CDS CCA 72 bp GGAAAGCTCCTGGAGAGTGGCTCCTTAGCCAGGCCTTaGATAAACAAACTCCAGCAGAGATATCCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: GKLLESGSLARP*INKLQQRYPQQ
Trigger: CTGCTGAGGATATCTCTGCTGGAGTTTGTTTATCCAAGGCCTGGCTAAGGAGCCACTCTCCAGGAGCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502660.5
CDS CAA 72 bp TTCCAGCGGACCTGGTACTTGGGCTTCTGCTTATACTaGTACAATAGCAGCAGGAGCAGCAGCAGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: FQRTWYLGFCLY*YNSSRSSSSSK
Trigger: CTTGCTGCTGCTGCTGCTCCTGCTGCTATTGTACAAGTATAAGCAGAAGCCCAAGTACCAGGTCCGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CAA 72 bp GGGAAAGCTCCTGGAGAGTGGCTCCTTAGCCAGGCCTaGGATAAACAAACTCCAGCAGAGATATCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: GKAPGEWLLSQA*DKQTPAEISSA
Trigger: TGCTGAGGATATCTCTGCTGGAGTTTGTTTATCCAAGGCCTGGCTAAGGAGCCACTCTCCAGGAGCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502660.5
CDS CAA 90 bp TCGATGATCTTCCAGCGGACCTGGTACTTGGGCTTCTGCTTATACTaGTACAATAGCAGCAGGAGCAGCAGCAGCAGCAAGGCCATGATG +
Preference number: 6 (lower is better)
Translates to: SMIFQRTWYLGFCLY*YNSSRSSSSSKAMM
Trigger: CATCATGGCCTTGCTGCTGCTGCTGCTCCTGCTGCTATTGTACAAGTATAAGCAGAAGCCCAAGTACCAGGTCCGCTGGAAGATCATCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS GCA 72 bp TCGATGATCTTCCAGCGGACCTGGTACTTGGGCTTCTaGTTATACTTGTACAATAGCAGCAGGAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SMIFQRTWYLGF*LYLYNSSRSSS
Trigger: GCTGCTGCTCCTGCTGCTATTGTACAAGTATAAGCAGAAGCCCAAGTACCAGGTCCGCTGGAAGATCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286301.7
ENST00000504875.5
ENST00000675795.1
CDS CAA 72 bp CACGCAGGAGTAGTTGCCGGCATGTTGGAAATCTACTaGATCGAGGTTGAGGGTCAGGACTTTTTGGTAACG +
Preference number: 6 (lower is better)
Translates to: HAGVVAGMLEIY*IEVEGQDFLVT
Trigger: CGTTACCAAAAAGTCCTGACCCTCAACCTCGATCAAGTAGATTTCCAACATGCCGGCAACTACTCCTGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CAA 90 bp GTTGCTGGCCACGCAGGAGTAGTTGCCGGCATGTTGGAAATCTACTaGATCGAGGTTGAGGGTCAGGACTTTTTGGTAACGGTTATTATG +
Preference number: 6 (lower is better)
Translates to: VAGHAGVVAGMLEIY*IEVEGQDFLVTVIM
Trigger: CATAATAACCGTTACCAAAAAGTCCTGACCCTCAACCTCGATCAAGTAGATTTCCAACATGCCGGCAACTACTCCTGCGTGGCCAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS TCA 72 bp AACCCTTGCAGAAGGGTACTCTCATCACCCTCATTCTaGCAGATGAGGCCATTTTGGTATCCTCAGGGTAAC +
Preference number: 6 (lower is better)
Translates to: NPCRRVLSSPSF*QMRPFWYPQGN
Trigger: GTTACCCTGAGGATACCAAAATGGCCTCATCTGTCAGAATGAGGGTGATGAGAGTACCCTTCTGCAAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509861.1
CDS TCA 72 bp GCAGAAGGGTACTCTCATCACCCTCATTCTGACAGATaGGGCCATTTTGGTATCCTCAGGGTAACTGTAATA +
Preference number: 6 (lower is better)
Translates to: AEGYSHHPHSDR*GHFGILRVTVI
Trigger: TATTACAGTTACCCTGAGGATACCAAAATGGCCTCATCTGTCAGAATGAGGGTGATGAGAGTACCCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509861.1
CDS CAA 90 bp GGCATGTTGGAAATCTACTTGATCGAGGTTGAGGGTCAGGACTTTTaGGTAACGGTTATTATGAAAGTCAGATTGTTGAGGGATTGCGAG +
Preference number: 6 (lower is better)
Translates to: GMLEIYLIEVEGQDF*VTVIMKVRLLRDCE
Trigger: CTCGCAATCCCTCAACAATCTGACTTTCATAATAACCGTTACCAAAAAGTCCTGACCCTCAACCTCGATCAAGTAGATTTCCAACATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS TCA 72 bp AGTTGCCGGCATGTTGGAAATCTACTTGATCGAGGTTaGGGGTCAGGACTTTTTGGTAACGGTTATTATGAA +
Preference number: 6 (lower is better)
Translates to: SCRHVGNLLDRG*GSGLFGNGYYE
Trigger: TTCATAATAACCGTTACCAAAAAGTCCTGACCCTCAACCTCGATCAAGTAGATTTCCAACATGCCGGCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1
CDS CAA 72 bp GAAATCTACTTGATCGAGGTTGAGGGTCAGGACTTTTaGGTAACGGTTATTATGAAAGTCAGATTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: EIYLIEVEGQDF*VTVIMKVRLLR
Trigger: CCTCAACAATCTGACTTTCATAATAACCGTTACCAAAAAGTCCTGACCCTCAACCTCGATCAAGTAGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286301.7
ENST00000502660.5
ENST00000504875.5
ENST00000543093.1
ENST00000675795.1