Pregenerated sensors for CSE1L (Homo sapiens)
Ensembl gene IDs: ENSG00000124207Ensembl transcript IDs: ENST00000262982.3, ENST00000396192.7, ENST00000469700.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCGCTCCTGCCGCCGCTCCGCCTCACATTCAAACCCCGGCAAAATaGCGCGACAGCGAGCCTGAGGCCAGAGCGCATGAGCGAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPAAAPPHIQTPAK*RDSEPEARAHERAA Trigger: GGCCGCTCGCTCATGCGCTCTGGCCTCAGGCTCGCTGTCGCGCCATTTTGCCGGGGTTTGAATGTGAGGCGGAGCGGCGGCAGGAGCGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396192.7 |
||
| CDS CCA 90 bp | GGGGATACAGAAACGGAGGAGGGAACCCCAGCCGCGGACCGTAGCTaGCACTACCCGCTCCTGCCGCCGCTCCGCCTCACATTCAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: GDTETEEGTPAADRS*HYPLLPPLRLTFKP Trigger: GGGTTTGAATGTGAGGCGGAGCGGCGGCAGGAGCGGGTAGTGCCAGCTACGGTCCGCGGCTGGGGTTCCCTCCTCCGTTTCTGTATCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS GCA 90 bp | ACCTACAAGAGATGGGAAACACACACTGGCTGTTGGAGATCTTGGTaGGCCAATACAAACCCCATCTTCTACGGGAGAGCTGCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TYKRWETHTGCWRSW*ANTNPIFYGRAATA Trigger: AGCTGTGGCAGCTCTCCCGTAGAAGATGGGGTTTGTATTGGCGCACCAAGATCTCCAACAGCCAGTGTGTGTTTCCCATCTCTTGTAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS CCA 90 bp | GGAACCTACAAGAGATGGGAAACACACACTGGCTGTTGGAGATCTTaGTGCGCCAATACAAACCCCATCTTCTACGGGAGAGCTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GTYKRWETHTGCWRS*CANTNPIFYGRAAT Trigger: TGTGGCAGCTCTCCCGTAGAAGATGGGGTTTGTATTGGCGCACCAAGATCTCCAACAGCCAGTGTGTGTTTCCCATCTCTTGTAGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS TCA 90 bp | TTGGAGATACTGGAGCGCTTCTGCATTCAGGCTGGTGCTCACCATTaGTGGAACCTACAAGAGATGGGAAACACACACTGGCTGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEILERFCIQAGAHH*WNLQEMGNTHWLLE Trigger: CTCCAACAGCCAGTGTGTGTTTCCCATCTCTTGTAGGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAGTATCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS GCA 90 bp | GAAGGTACCCTTGGAGATACTGGAGCGCTTCTGCATTCAGGCTGGTaGTCACCATTGATGGAACCTACAAGAGATGGGAAACACACACTG | + |
|
Preference number: 5 (lower is better) Translates to: EGTLGDTGALLHSGW*SPLMEPTRDGKHTL Trigger: CAGTGTGTGTTTCCCATCTCTTGTAGGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAGTATCTCCAAGGGTACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS CCA 90 bp | CCTGAAGGTACCCTTGGAGATACTGGAGCGCTTCTGCATTCAGGCTaGTGCTCACCATTGATGGAACCTACAAGAGATGGGAAACACACA | + |
|
Preference number: 5 (lower is better) Translates to: PEGTLGDTGALLHSG*CSPLMEPTRDGKHT Trigger: TGTGTGTTTCCCATCTCTTGTAGGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAGTATCTCCAAGGGTACCTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS CCA 90 bp | ACCATTGATGGAACCTACAAGAGATGGGAAACACACACTGGCTGTTaGAGATCTTGGTGCGCCAATACAAACCCCATCTTCTACGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TIDGTYKRWETHTGC*RSWCANTNPIFYGR Trigger: TCTCCCGTAGAAGATGGGGTTTGTATTGGCGCACCAAGATCTCCAACAGCCAGTGTGTGTTTCCCATCTCTTGTAGGTTCCATCAATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS TCA 90 bp | TGTGCTGTACGGAGGACTCCATTAATAACATGGAAATCTCCACTCTaGAAGCGATTCACCATTTCTGTCAGCAAGTCAGGCCATTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CAVRRTPLITWKSPL*KRFTISVSKSGHFC Trigger: ACAGAAATGGCCTGACTTGCTGACAGAAATGGTGAATCGCTTTCAGAGTGGAGATTTCCATGTTATTAATGGAGTCCTCCGTACAGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS TCA 90 bp | GCTGCAGCACTTGCTATTGTGTTTGAACCGCGTTCTAAGAATGCTTaGAGAAGCCTCACTAGAGCAGGAATATTTCCTGTTCTTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AAALAIVFEPRSKNA*RSLTRAGIFPVLSQ Trigger: TTGGGAAAGAACAGGAAATATTCCTGCTCTAGTGAGGCTTCTTCAAGCATTCTTAGAACGCGGTTCAAACACAATAGCAAGTGCTGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS GCA 90 bp | ATTGTTAGGCCCTCGCATAGTAAAGAGCCGTTCAAGAGCATGAGCTaGGTAAGTATGAACAACAATACTTTCAGCTTGAAGATGATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: IVRPSHSKEPFKSMS*VSMNNNTFSLKMIN Trigger: ATTAATCATCTTCAAGCTGAAAGTATTGTTGTTCATACTTACGCAGCTCATGCTCTTGAACGGCTCTTTACTATGCGAGGGCCTAACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CCA 90 bp | TGGTATACTCAGTGTCCATCATTGGGGGACATTCTGTTAGTAATTTaGTTATGCCAACCGCACAGATCTTTTTCTCTACATTTCCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: WYTQCPSLGDILLVI*LCQPHRSFSLHFQI Trigger: TATCTGGAAATGTAGAGAAAAAGATCTGTGCGGTTGGCATAACCAAATTACTAACAGAATGTCCCCCAATGATGGACACTGAGTATACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000262982.3 ENST00000396192.7 ENST00000469700.1 |
||
| CDS GCA 72 bp | CCCCAGCCGCGGACCGTAGCTGGCACTACCCGCTCCTaGCGCCGCTCCGCCTCACATTCAAACCCCGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PQPRTVAGTTRS*RRSASHSNPGK Trigger: TTTGCCGGGGTTTGAATGTGAGGCGGAGCGGCGGCAGGAGCGGGTAGTGCCAGCTACGGTCCGCGGCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CCA 72 bp | GCCGCCGCTCCGCCTCACATTCAAACCCCGGCAAAATaGCGCGACAGCGAGCCTGAGGCCAGAGCGCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: AAAPPHIQTPAK*RDSEPEARAHE Trigger: CTCATGCGCTCTGGCCTCAGGCTCGCTGTCGCGCCATTTTGCCGGGGTTTGAATGTGAGGCGGAGCGGCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396192.7 |
||
| CDS GCA 72 bp | CTTGGAGATACTGGAGCGCTTCTGCATTCAGGCTGGTaGTCACCATTGATGGAACCCTTCCTGGACAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGDTGALLHSGW*SPLMEPFLDRR Trigger: CCGCCTGTCCAGGAAGGGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAGTATCTCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CCA 72 bp | ACCCTTGGAGATACTGGAGCGCTTCTGCATTCAGGCTaGTGCTCACCATTGATGGAACCCTTCCTGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: TLGDTGALLHSG*CSPLMEPFLDR Trigger: CCTGTCCAGGAAGGGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAGTATCTCCAAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS TCA 72 bp | CTGGAGCGCTTCTGCATTCAGGCTGGTGCTCACCATTaGTGGAACCTACAAGAGATGGGAAACACACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LERFCIQAGAHH*WNLQEMGNTHW Trigger: CCAGTGTGTGTTTCCCATCTCTTGTAGGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS CCA 72 bp | ACCCTTGGAGATACTGGAGCGCTTCTGCATTCAGGCTaGTGCTCACCATTGATGGAACCTACAAGAGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: TLGDTGALLHSG*CSPLMEPTRDG Trigger: CCCATCTCTTGTAGGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAGTATCTCCAAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS CAA 72 bp | TTAAAGCAGTGTCACACTGGCTGCCTGAAGGTACCCTaGGAGATACTGGAGCGCTTCTGCATTCAGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LKQCHTGCLKVP*EILERFCIQAG Trigger: ACCAGCCTGAATGCAGAAGCGCTCCAGTATCTCCAAGGGTACCTTCAGGCAGCCAGTGTGACACTGCTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000262982.3 ENST00000396192.7 ENST00000469700.1 |
||
| CDS CAA 90 bp | TGGAACCTACAAGAGATGGGAAACACACACTGGCTGTTGGAGATCTaGGTGCGCCAATACAAACCCCATCTTCTACGGGAGAGCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: WNLQEMGNTHWLLEI*VRQYKPHLLRESCH Trigger: GTGGCAGCTCTCCCGTAGAAGATGGGGTTTGTATTGGCGCACCAAGATCTCCAACAGCCAGTGTGTGTTTCCCATCTCTTGTAGGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS CAA 90 bp | CTTGGAGATACTGGAGCGCTTCTGCATTCAGGCTGGTGCTCACCATaGATGGAACCTACAAGAGATGGGAAACACACACTGGCTGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGDTGALLHSGWCSP*MEPTRDGKHTLAVG Trigger: TCCAACAGCCAGTGTGTGTTTCCCATCTCTTGTAGGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAGTATCTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS CAA 72 bp | ACTGGAGCGCTTCTGCATTCAGGCTGGTGCTCACCATaGATGGAACCTACAAGAGATGGGAAACACACACTG | + |
|
Preference number: 6 (lower is better) Translates to: TGALLHSGWCSP*MEPTRDGKHTL Trigger: CAGTGTGTGTTTCCCATCTCTTGTAGGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS TCA 72 bp | GGTCCTTCCTGGACAGGCGGTAGACAACTTGTGAAGTaGCTGTGCCAGGTGAATTTTGGGGTTATTCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: GPSWTGGRQLVK*LCQVNFGVIHH Trigger: ATGGTGAATAACCCCAAAATTCACCTGGCACAGTCACTTCACAAGTTGTCTACCGCCTGTCCAGGAAGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS CCA 72 bp | GGAACCTACAAGAGATGGGAAACACACACTGGCTGTTaGAGATCTTGGTGCGCCAATACAAACCCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GTYKRWETHTGC*RSWCANTNPIF Trigger: GAAGATGGGGTTTGTATTGGCGCACCAAGATCTCCAACAGCCAGTGTGTGTTTCCCATCTCTTGTAGGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS TCA 72 bp | AACCCTTCCTGGACAGGCGGTAGACAACTTGTGAAGTaGCTGTGCCAGGTGAATTTTGGGGTTATTCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: NPSWTGGRQLVK*LCQVNFGVIHH Trigger: ATGGTGAATAACCCCAAAATTCACCTGGCACAGTCACTTCACAAGTTGTCTACCGCCTGTCCAGGAAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CAA 72 bp | TGGAACCTACAAGAGATGGGAAACACACACTGGCTGTaGGAGATCTTGGTGCGCCAATACAAACCCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: WNLQEMGNTHWL*EILVRQYKPHL Trigger: AAGATGGGGTTTGTATTGGCGCACCAAGATCTCCAACAGCCAGTGTGTGTTTCCCATCTCTTGTAGGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469700.1 |
||
| CDS CAA 90 bp | CTAGTAACCCAGGAATTTTGTCAGCTGCAGCACTTGCTATTGTGTTaGAACCGCGTTCTAAGAATGCTTGAAGAAGCCTCACTAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LVTQEFCQLQHLLLC*NRVLRMLEEASLEQ Trigger: CTGCTCTAGTGAGGCTTCTTCAAGCATTCTTAGAACGCGGTTCAAACACAATAGCAAGTGCTGCAGCTGACAAAATTCCTGGGTTACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS TCA 72 bp | CGGAGGACTCCATTAATAACATGGAAATCTCCACTCTaGAAGCGATTCACCATTTCTGTCAGCAAGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRTPLITWKSPL*KRFTISVSKSG Trigger: GCCTGACTTGCTGACAGAAATGGTGAATCGCTTTCAGAGTGGAGATTTCCATGTTATTAATGGAGTCCTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CAA 72 bp | ATTTGCTCTGGGCTGCTAAGCATCAAGTGCACTATGTaGGCTTTAATGGCCACTCGATCGGCTTCACAAATT | + |
|
Preference number: 6 (lower is better) Translates to: ICSGLLSIKCTM*ALMATRSASQI Trigger: AATTTGTGAAGCCGATCGAGTGGCCATTAAAGCCAACATAGTGCACTTGATGCTTAGCAGCCCAGAGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CAA 90 bp | AGACACCTAGTAACCCAGGAATTTTGTCAGCTGCAGCACTTGCTATaGTGTTTGAACCGCGTTCTAAGAATGCTTGAAGAAGCCTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: RHLVTQEFCQLQHLL*CLNRVLRMLEEASL Trigger: TAGTGAGGCTTCTTCAAGCATTCTTAGAACGCGGTTCAAACACAATAGCAAGTGCTGCAGCTGACAAAATTCCTGGGTTACTAGGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS TCA 72 bp | CCTTGGTGGTCATTTGCTTTGGATGCAATCAGCTTCTaGAAGACACCTAGTAACCCAGGAATTTTGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PWWSFALDAISF*KTPSNPGILSA Trigger: AGCTGACAAAATTCCTGGGTTACTAGGTGTCTTTCAGAAGCTGATTGCATCCAAAGCAAATGACCACCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CCA 72 bp | GAAAACAGAATCCTCAGGGCAGAGGCATCATTTGCATaGGTACTGCAGAGTTCAATAGTGGCCTTAAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ENRILRAEASFA*VLQSSIVALKR Trigger: TCTTTTTAAGGCCACTATTGAACTCTGCAGTACCCATGCAAATGATGCCTCTGCCCTGAGGATTCTGTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS GCA 72 bp | AGGCAGGTATCGCTGGAATTCTTCATCGTACTTTTGTaGATAGAGTGCGGCATTATCACAAATCTGGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: RQVSLEFFIVLL*IECGIITNLGF Trigger: AAATCCCAGATTTGTGATAATGCCGCACTCTATGCACAAAAGTACGATGAAGAATTCCAGCGATACCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262982.3 |
||
| CDS CAA 72 bp | GTAACCCAGGAATTTTGTCAGCTGCAGCACTTGCTATaGTGTTTGAACCGCGTTCTAAGAATGCTTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VTQEFCQLQHLL*CLNRVLRMLEE Trigger: TTCTTCAAGCATTCTTAGAACGCGGTTCAAACACAATAGCAAGTGCTGCAGCTGACAAAATTCCTGGGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CAA 90 bp | ACTGTAATAATGGAGTCCACAGTTTGGTATACTCAGTGTCCATCATaGGGGGACATTCTGTTAGTAATTTGGTTATGCCAACCGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: TVIMESTVWYTQCPS*GDILLVIWLCQPHR Trigger: TCTGTGCGGTTGGCATAACCAAATTACTAACAGAATGTCCCCCAATGATGGACACTGAGTATACCAAACTGTGGACTCCATTATTACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000262982.3 ENST00000396192.7 ENST00000469700.1 |
||
| CDS TCA 72 bp | CTTGCTATTGTGTTTGAACCGCGTTCTAAGAATGCTTaGAGAAGCCTCACTAGAGCAGGAATATTTCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LAIVFEPRSKNA*RSLTRAGIFPV Trigger: AACAGGAAATATTCCTGCTCTAGTGAGGCTTCTTCAAGCATTCTTAGAACGCGGTTCAAACACAATAGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS GCA 72 bp | CCATCATTGGGGGACATTCTGTTAGTAATTTGGTTATaGCAACCGCACAGATCTTTTTCTCTACATTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSLGDILLVIWL*QPHRSFSLHFQ Trigger: CTGGAAATGTAGAGAAAAAGATCTGTGCGGTTGGCATAACCAAATTACTAACAGAATGTCCCCCAATGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000262982.3 ENST00000396192.7 ENST00000469700.1 |
||
| CDS CCA 72 bp | CAGTGTCCATCATTGGGGGACATTCTGTTAGTAATTTaGTTATGCCAACCGCACAGATCTTTTTCTCTACAT | + |
|
Preference number: 6 (lower is better) Translates to: QCPSLGDILLVI*LCQPHRSFSLH Trigger: ATGTAGAGAAAAAGATCTGTGCGGTTGGCATAACCAAATTACTAACAGAATGTCCCCCAATGATGGACACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000262982.3 ENST00000396192.7 ENST00000469700.1 |
||
| CDS CAA 72 bp | ATGGAGTCCACAGTTTGGTATACTCAGTGTCCATCATaGGGGGACATTCTGTTAGTAATTTGGTTATGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: MESTVWYTQCPS*GDILLVIWLCQ Trigger: TTGGCATAACCAAATTACTAACAGAATGTCCCCCAATGATGGACACTGAGTATACCAAACTGTGGACTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000262982.3 ENST00000396192.7 ENST00000469700.1 |
||
| CDS CAA 90 bp | TTGGTATACTCAGTGTCCATCATTGGGGGACATTCTGTTAGTAATTaGGTTATGCCAACCGCACAGATCTTTTTCTCTACATTTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LVYSVSIIGGHSVSN*VMPTAQIFFSTFPD Trigger: ATCTGGAAATGTAGAGAAAAAGATCTGTGCGGTTGGCATAACCAAATTACTAACAGAATGTCCCCCAATGATGGACACTGAGTATACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000262982.3 ENST00000396192.7 ENST00000469700.1 |
||
| CDS CAA 90 bp | TGTGCTCTATTATACTGTTTAGAAGATAAAAACCTTGGTGGTCATTaGCTTTGGATGCAATCAGCTTCTGAAAGACACCTAGTAACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CALLYCLEDKNLGGH*LWMQSASERHLVTQ Trigger: CTGGGTTACTAGGTGTCTTTCAGAAGCTGATTGCATCCAAAGCAAATGACCACCAAGGTTTTTATCTTCTAAACAGTATAATAGAGCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS TCA 72 bp | TTTTTCCCAGCAAATGCCAACTGTGAGAAGGCAGTCTaGTATCCTGGTGTATCTTCTATGTCAATAAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: FFPANANCEKAV*YPGVSSMSIKC Trigger: ACATTTTATTGACATAGAAGATACACCAGGATATCAGACTGCCTTCTCACAGTTGGCATTTGCTGGGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000262982.3 ENST00000396192.7 ENST00000469700.1 |
||
| CDS CCA 72 bp | AATGTTACTGAAGCACATACTTTGATAACATTATCCTaGGACTTCTCCAGTAATGTCAAAAGCAACAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: NVTEAHTLITLS*DFSSNVKSNSG Trigger: TCCACTGTTGCTTTTGACATTACTGGAGAAGTCCCAGGATAATGTTATCAAAGTATGTGCTTCAGTAACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CAA 72 bp | GCCTCCTCAAAATTTACAACAGCAGCAGGGTTAGCTTaGCAAGTTATTCTTATGGATAAACATATTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASSKFTTAAGLA*QVILMDKHIAS Trigger: TGAAGCAATATGTTTATCCATAAGAATAACTTGCAAAGCTAACCCTGCTGCTGTTGTAAATTTTGAGGAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS CAA 72 bp | TTATACTGTTTAGAAGATAAAAACCTTGGTGGTCATTaGCTTTGGATGCAATCAGCTTCTGAAAGACACCTA | + |
|
Preference number: 6 (lower is better) Translates to: LYCLEDKNLGGH*LWMQSASERHL Trigger: TAGGTGTCTTTCAGAAGCTGATTGCATCCAAAGCAAATGACCACCAAGGTTTTTATCTTCTAAACAGTATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||
| CDS TCA 72 bp | TCATTCACATTAGCTGATTTTAAATCAGGGAGGATGTaGTTCACAAAGAACTCAGTTAGGTTTACAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFTLADFKSGRM*FTKNSVRFTSS Trigger: TGAACTTGTAAACCTAACTGAGTTCTTTGTGAATCACATCCTCCCTGATTTAAAATCAGCTAATGTGAATGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262982.3 ENST00000396192.7 |
||