Pregenerated sensors for CSDE1 (Homo sapiens)
Ensembl gene IDs: ENSG00000009307Ensembl transcript IDs: ENST00000261443.9, ENST00000339438.10, ENST00000358528.9, ENST00000369530.5, ENST00000438362.6, ENST00000483030.1, ENST00000483407.1, ENST00000524652.1, ENST00000525132.1, ENST00000525878.5, ENST00000525970.5, ENST00000529046.5, ENST00000530784.1, ENST00000530886.5, ENST00000533818.5, ENST00000534389.2, ENST00000534699.5, ENST00000610726.4
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCTCCCCTTTCTGCAGGCAATCCCCTTTGTTGGCCATCCCAACGATaGCAAATGGATAGACCTCACCTTTCATATCGCCCTCCTCCACAA | + |
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Preference number: 5 (lower is better) Translates to: SPLSAGNPLCWPSQR*QMDRPHLSYRPPPQ Trigger: TTGTGGAGGAGGGCGATATGAAAGGTGAGGTCTATCCATTTGGCATCGTTGGGATGGCCAACAAAGGGGATTGCCTGCAGAAAGGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530784.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS TCA 90 bp | TTGCAGATTCAAGCCTGTTTCAGGGAGCGTTCTCTGCTTCACCTGTaGGTTAAGCAAGACGGCCGCCATCTGGGTGTTTCTAAGGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: LQIQACFRERSLLHL*VKQDGRHLGVSKGK Trigger: TTTTCCCTTAGAAACACCCAGATGGCGGCCGTCTTGCTTAACTCACAGGTGAAGCAGAGAACGCTCCCTGAAACAGGCTTGAATCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524652.1 |
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| CDS GCA 90 bp | TCAGATATTCTTTGCAGATTCAAGCCTGTTTCAGGGAGCGTTCTCTaGTTCACCTGTGAGTTAAGCAAGACGGCCGCCATCTGGGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: SDILCRFKPVSGSVL*FTCELSKTAAIWVF Trigger: AAACACCCAGATGGCGGCCGTCTTGCTTAACTCACAGGTGAAGCAGAGAACGCTCCCTGAAACAGGCTTGAATCTGCAAAGAATATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524652.1 |
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| CDS TCA 90 bp | GCTTACGTAGCACATAGGTACTCACAGAACTACTCATTAGGTCTCTaGAAAAAGCAGGGCGAGGATAGCATCTGGCAGCATACACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: AYVAHRYSQNYSLGL*KKQGEDSIWQHTPG Trigger: TCCAGGTGTATGCTGCCAGATGCTATCCTCGCCCTGCTTTTTTCAGAGACCTAATGAGTAGTTCTGTGAGTACCTATGTGCTACGTAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS TCA 90 bp | GAAGATAAGGGTAAAGAAAGTGAAGGAGGGGCTGCAGGAGAGGGATaGGGATCTGATGACACAGTAAAAACGTTCTCCATCTCAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: EDKGKESEGGAAGEG*GSDDTVKTFSISNS Trigger: GCTGTTTGAGATGGAGAACGTTTTTACTGTGTCATCAGATCCTCATCCCTCTCCTGCAGCCCCTCCTTCACTTTCTTTACCCTTATCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000369530.5 ENST00000438362.6 ENST00000610726.4 |
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| CDS TCA 90 bp | AAGAATACAACTGCTGCTGTACCGGGCAATCTCACAGTACAGCACTaGAGAAAACAAAGACTACTAGCAGCGTTGGGAAGTGCTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: KNTTAAVPGNLTVQH*RKQRLLAALGSALS Trigger: TGAAAGAGCACTTCCCAACGCTGCTAGTAGTCTTTGTTTTCTTCAGTGCTGTACTGTGAGATTGCCCGGTACAGCAGCAGTTGTATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000524652.1 ENST00000525878.5 ENST00000525970.5 ENST00000530886.5 ENST00000533818.5 ENST00000610726.4 |
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| CDS TCA 90 bp | AGTCTTGCAGGTTGCCATTATACGGGCAATCTCACAGTACAGCACTaGAGAAAACAAAGACTACTAGCAGCGTTGGGAAGTGCTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLAGCHYTGNLTVQH*RKQRLLAALGSALS Trigger: TGAAAGAGCACTTCCCAACGCTGCTAGTAGTCTTTGTTTTCTTCAGTGCTGTACTGTGAGATTGCCCGTATAATGGCAACCTGCAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525132.1 |
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| CDS GCA 90 bp | GGGCAGACAGCAAGCACTTGCAAAGGAGTGTGTTTTCCACCTAACTaGCCAAATGACTCACTTTTTATGATGGGACTCTTGCCTCATATA | + |
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Preference number: 5 (lower is better) Translates to: GQTASTCKGVCFPPN*PNDSLFMMGLLPHI Trigger: TATATGAGGCAAGAGTCCCATCATAAAAAGTGAGTCATTTGGGCAGTTAGGTGGAAAACACACTCCTTTGCAAGTGCTTGCTGTCTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483407.1 |
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| CDS TCA 90 bp | AAGGAGTGTGTTTTCCACCTAACTGCCCAAATGACTCACTTTTTATaGTGGGACTCTTGCCTCATATACCTAGCTAGAAAGACAGGACAG | + |
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Preference number: 5 (lower is better) Translates to: KECVFHLTAQMTHFL*WDSCLIYLARKTGQ Trigger: CTGTCCTGTCTTTCTAGCTAGGTATATGAGGCAAGAGTCCCATCATAAAAAGTGAGTCATTTGGGCAGTTAGGTGGAAAACACACTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483407.1 |
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| CDS CCA 90 bp | AGTACCATTAGGGTACCCATTATGTCCATTGTTGTGGAGAAGGTTTaGATCAAAGCTCATCTTAACACCTGTCTCACAGAGTTGTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: STIRVPIMSIVVEKV*IKAHLNTCLTELLR Trigger: TCTCAACAACTCTGTGAGACAGGTGTTAAGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACATAATGGGTACCCTAATGGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS TCA 90 bp | CTCATGGCAGCAATCACACCCATTTCTCGGGCTTCATTAGTGAACTaGAATGTATTTGACAGAACTTCTATATTGGTTGCTCGCTCTAAT | + |
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Preference number: 5 (lower is better) Translates to: LMAAITPISRASLVN*NVFDRTSILVARSN Trigger: ATTAGAGCGAGCAACCAATATAGAAGTTCTGTCAAATACATTTCAGTTCACTAATGAAGCCCGAGAAATGGGTGTGATTGCTGCCATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS GCA 90 bp | TTGGAGTTAGAATTACGACCTAAAAGTCGCACACAAGTTGCAACCTaGTGTCCAGGCCTCTGTTTGTCACTAATACTAAATTCAACCTTA | + |
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Preference number: 5 (lower is better) Translates to: LELELRPKSRTQVAT*CPGLCLSLILNSTL Trigger: TAAGGTTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGGTTGCAACTTGTGTGCGACTTTTAGGTCGTAATTCTAACTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS GCA 90 bp | AAAGAGCGAGAGAAAATGATCTACCAAGCTAATAAAGAATACAACTaGTGCTGTACCGGGCAATCTCACAGTACAGCACTGAAGAAAACA | + |
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Preference number: 5 (lower is better) Translates to: KEREKMIYQANKEYN*CCTGQSHSTALKKT Trigger: TGTTTTCTTCAGTGCTGTACTGTGAGATTGCCCGGTACAGCAGCAGTTGTATTCTTTATTAGCTTGGTAGATCATTTTCTCTCGCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000524652.1 ENST00000525878.5 ENST00000525970.5 ENST00000530886.5 ENST00000533818.5 ENST00000610726.4 |
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| CDS TCA 90 bp | CTGCTATCCATCCAACATTTCTCCATATTGACCATTATGCTATCATaGGCTAGTCTGCCAAGTTATTTATTCACTGGCTCTGGGGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: LLSIQHFSILTIMLS*ASLPSYLFTGSGVF Trigger: AAAAACCCCAGAGCCAGTGAATAAATAACTTGGCAGACTAGCTCATGATAGCATAATGGTCAATATGGAGAAATGTTGGATGGATAGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS GCA 72 bp | GTACGTAGGAATAAATCTCGCTTCTCTCGCGAGAGTTaGGGGCTCCGGGCGCGTGCACGAGAAGGGGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: VRRNKSRFSRES*GLRARAREGAE Trigger: CTCCGCCCCTTCTCGTGCACGCGCCCGGAGCCCGCAACTCTCGCGAGAGAAGCGAGATTTATTCCTACGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610726.4 |
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| CDS TCA 72 bp | CAAGCCTGTTTCAGGGAGCGTTCTCTGCTTCACCTGTaGGTTAAGCAAGACGGCCGCCATCTGGGTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: QACFRERSLLHL*VKQDGRHLGVS Trigger: AGAAACACCCAGATGGCGGCCGTCTTGCTTAACTCACAGGTGAAGCAGAGAACGCTCCCTGAAACAGGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524652.1 |
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| CDS CCA 72 bp | CACTTCCCCATTACGTTCGTAGCATACACTCCCTGTTaGACTCTGACCCGGGGCAGCTGGAGATTTACTCTC | + |
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Preference number: 6 (lower is better) Translates to: HFPITFVAYTPC*TLTRGSWRFTL Trigger: GAGAGTAAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTAATGGGGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000358528.9 ENST00000438362.6 ENST00000534699.5 ENST00000610726.4 |
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| CDS CCA 72 bp | TGCTTCACCTGTGAGTTAAGCAAGACGGCCGCCATCTaGGTGTTTCTAAGGGAAAACCCCAACAGCTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: CFTCELSKTAAI*VFLRENPNSSA Trigger: CGCTGAGCTGTTGGGGTTTTCCCTTAGAAACACCCAGATGGCGGCCGTCTTGCTTAACTCACAGGTGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524652.1 |
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| CDS GCA 72 bp | CTTTGCAGATTCAAGCCTGTTTCAGGGAGCGTTCTCTaGTTCACCTGTGAGTTAAGCAAGACGGCCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: LCRFKPVSGSVL*FTCELSKTAAI Trigger: GATGGCGGCCGTCTTGCTTAACTCACAGGTGAAGCAGAGAACGCTCCCTGAAACAGGCTTGAATCTGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524652.1 |
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| CDS CCA 72 bp | GCAATCCCCTTTGTTGGCCATCCCAACGATGCCAAATaGATAGACCTCACCTTTCATATCGCCCTCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: AIPFVGHPNDAK*IDLTFHIALLH Trigger: GTGGAGGAGGGCGATATGAAAGGTGAGGTCTATCCATTTGGCATCGTTGGGATGGCCAACAAAGGGGATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530784.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 72 bp | ACACTTCCCCATTACGTTCGTAGCATACACTCCCTGTaGGACTCTGACCCGGGGCAGCTGGAGATTTACTCT | + |
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Preference number: 6 (lower is better) Translates to: TLPHYVRSIHSL*DSDPGQLEIYS Trigger: AGAGTAAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTAATGGGGAAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000358528.9 ENST00000438362.6 ENST00000534699.5 ENST00000610726.4 |
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| CDS GCA 72 bp | TCTGCAGGCAATCCCCTTTGTTGGCCATCCCAACGATaGCAAATGGATAGACCTCACCTTTCATATCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SAGNPLCWPSQR*QMDRPHLSYRP Trigger: AGGGCGATATGAAAGGTGAGGTCTATCCATTTGGCATCGTTGGGATGGCCAACAAAGGGGATTGCCTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530784.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 90 bp | CGCAGTGCTGCTGAAGTACCATTAGGGTACCCATTATGTCCATTGTaGTGGAGAAGGTTTGGATCAAAGCTCATCCCAACAGCTCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RSAAEVPLGYPLCPL*WRRFGSKLIPTAQR Trigger: GCGCTGAGCTGTTGGGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACATAATGGGTACCCTAATGGTACTTCAGCAGCACTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261443.9 ENST00000534699.5 |
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| CDS CAA 90 bp | GACCTCACCTTTCATATCGCCCTCCTCCACAATCTCAATCATTCCTaGGTACTCAGTCTGTGTTGGATCAACACTCCTCAGGGGGCGAAT | + |
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Preference number: 6 (lower is better) Translates to: DLTFHIALLHNLNHS*VLSLCWINTPQGAN Trigger: ATTCGCCCCCTGAGGAGTGTTGATCCAACACAGACTGAGTACCAAGGAATGATTGAGATTGTGGAGGAGGGCGATATGAAAGGTGAGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530784.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 72 bp | AGCCATAGTTTGTGCATTTTGGCCCAGGACACACAATaGGAACTTGACGCTCTCCCCTTTCTGCAGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: SHSLCILAQDTQ*ELDALPFLQAI Trigger: GATTGCCTGCAGAAAGGGGAGAGCGTCAAGTTCCAATTGTGTGTCCTGGGCCAAAATGCACAAACTATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530784.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 90 bp | GCCAAATGCCTCCTTCATGGCACAAACTACTCCCTGACAGCGGGCTaGTTTCTTTTTCAACAGCATAATGTTGCGAGCACTTACAGCACC | + |
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Preference number: 6 (lower is better) Translates to: AKCLLHGTNYSLTAG*FLFQQHNVASTYST Trigger: GGTGCTGTAAGTGCTCGCAACATTATGCTGTTGAAAAAGAAACAAGCCCGCTGTCAGGGAGTAGTTTGTGCCATGAAGGAGGCATTTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000529046.5 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 90 bp | CGCCCTCCTCCACAATCTCAATCATTCCTTGGTACTCAGTCTGTGTaGGATCAACACTCCTCAGGGGGCGAATTACTTTGCCAGAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: RPPPQSQSFLGTQSV*DQHSSGGELLCQSK Trigger: TTTACTCTGGCAAAGTAATTCGCCCCCTGAGGAGTGTTGATCCAACACAGACTGAGTACCAAGGAATGATTGAGATTGTGGAGGAGGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530784.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS TCA 72 bp | ACTGCTGCTGTACCGGGCAATCTCACAGTACAGCACTaGAGAAAACAAAGACTACTAGCAGCGTTGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: TAAVPGNLTVQH*RKQRLLAALGS Trigger: ACTTCCCAACGCTGCTAGTAGTCTTTGTTTTCTTCAGTGCTGTACTGTGAGATTGCCCGGTACAGCAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000524652.1 ENST00000525878.5 ENST00000525970.5 ENST00000530886.5 ENST00000533818.5 ENST00000610726.4 |
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| CDS CAA 90 bp | TCACGCAGTGCTGCTGAAGTACCATTAGGGTACCCATTATGTCCATaGTTGTGGAGAAGGTTTGGATCAAAGCTCATCCCAACAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SRSAAEVPLGYPLCP*LWRRFGSKLIPTAQ Trigger: CTGAGCTGTTGGGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACATAATGGGTACCCTAATGGTACTTCAGCAGCACTGCGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261443.9 ENST00000534699.5 |
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| CDS TCA 72 bp | GCACATAGGTACTCACAGAACTACTCATTAGGTCTCTaGAAAAAGCAGGGCGAGGATAGCATCTGGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: AHRYSQNYSLGL*KKQGEDSIWQH Trigger: ATGCTGCCAGATGCTATCCTCGCCCTGCTTTTTTCAGAGACCTAATGAGTAGTTCTGTGAGTACCTATGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS CCA 72 bp | TTCATATCGCCCTCCTCCACAATCTCAATCATTCCTTaGTACTCAGTCTGTGTTGGATCAACACTCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: FISPSSTISIIP*YSVCVGSTLLR Trigger: CCTGAGGAGTGTTGATCCAACACAGACTGAGTACCAAGGAATGATTGAGATTGTGGAGGAGGGCGATATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530784.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 72 bp | CCACAATCTCAATCATTCCTTGGTACTCAGTCTGTGTaGGATCAACACTCCTCAGGGGGCGAATTACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: PQSQSFLGTQSV*DQHSSGGELLC Trigger: GCAAAGTAATTCGCCCCCTGAGGAGTGTTGATCCAACACAGACTGAGTACCAAGGAATGATTGAGATTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530784.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 90 bp | CGCAGTGCTGCTGAAGTACCATTAGGGTACCCATTATGTCCATTGTaGTGGAGAAGGTTTGGATCAAAGCTCATCTTAACACCTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSAAEVPLGYPLCPL*WRRFGSKLILTPVS Trigger: TGAGACAGGTGTTAAGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACATAATGGGTACCCTAATGGTACTTCAGCAGCACTGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS CAA 90 bp | TCACGCAGTGCTGCTGAAGTACCATTAGGGTACCCATTATGTCCATaGTTGTGGAGAAGGTTTGGATCAAAGCTCATCTTAACACCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRSAAEVPLGYPLCP*LWRRFGSKLILTPV Trigger: GACAGGTGTTAAGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACATAATGGGTACCCTAATGGTACTTCAGCAGCACTGCGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS TCA 72 bp | AAGCCAAATGCCTCCTTCATGGCACAAACTACTCCCTaGCAGCGGGCTTGTTTCTTTTTCAACAGCATAATG | + |
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Preference number: 6 (lower is better) Translates to: KPNASFMAQTTP*QRACFFFNSIM Trigger: CATTATGCTGTTGAAAAAGAAACAAGCCCGCTGTCAGGGAGTAGTTTGTGCCATGAAGGAGGCATTTGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000529046.5 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS TCA 72 bp | GGTTGCCATTATACGGGCAATCTCACAGTACAGCACTaGAGAAAACAAAGACTACTAGCAGCGTTGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GCHYTGNLTVQH*RKQRLLAALGS Trigger: ACTTCCCAACGCTGCTAGTAGTCTTTGTTTTCTTCAGTGCTGTACTGTGAGATTGCCCGTATAATGGCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525132.1 |
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| CDS CAA 72 bp | TTTCATATCGCCCTCCTCCACAATCTCAATCATTCCTaGGTACTCAGTCTGTGTTGGATCAACACTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: FHIALLHNLNHS*VLSLCWINTPQ Trigger: CTGAGGAGTGTTGATCCAACACAGACTGAGTACCAAGGAATGATTGAGATTGTGGAGGAGGGCGATATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530784.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 90 bp | AGCGCACACAACTTGTCCATTCATTCGTTCTTCAGGGAGGATTTCTaGTTTTATCTTCACCAGTTTAACAGCAATGGGTTTCCCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SAHNLSIHSFFREDF*FYLHQFNSNGFPSP Trigger: CGGACTGGGAAACCCATTGCTGTTAAACTGGTGAAGATAAAACAAGAAATCCTCCCTGAAGAACGAATGAATGGACAAGTTGTGTGCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000358528.9 ENST00000438362.6 ENST00000534699.5 ENST00000610726.4 |
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| CDS CCA 72 bp | GAAGTACCATTAGGGTACCCATTATGTCCATTGTTGTaGAGAAGGTTTGGATCAAAGCTCATCCCAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: EVPLGYPLCPLL*RRFGSKLIPTA Trigger: AGCTGTTGGGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACATAATGGGTACCCTAATGGTACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261443.9 ENST00000534699.5 |
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| CDS CCA 72 bp | ATATGGAGCTGGTTCCCATCCAGAATTTCACTGAAGTaGAAGAACATACGAACATCACGATCCACACACTTG | + |
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Preference number: 6 (lower is better) Translates to: IWSWFPSRISLK*KNIRTSRSTHL Trigger: CAAGTGTGTGGATCGTGATGTTCGTATGTTCTTCCACTTCAGTGAAATTCTGGATGGGAACCAGCTCCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CCA 72 bp | TCAGGAACCACAGTAAACTCTACTTCATCTGCAATATaGAGCTGGTTCCCATCCAGAATTTCACTGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SGTTVNSTSSAI*SWFPSRISLKW Trigger: CCACTTCAGTGAAATTCTGGATGGGAACCAGCTCCATATTGCAGATGAAGTAGAGTTTACTGTGGTTCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CCA 72 bp | AGGGTACCCATTATGTCCATTGTTGTGGAGAAGGTTTaGATCAAAGCTCATCTTAACACCTGTCTCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: RVPIMSIVVEKV*IKAHLNTCLTE Trigger: CTCTGTGAGACAGGTGTTAAGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACATAATGGGTACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS CAA 72 bp | TTAAACCTAACATGGTCACCTTCCAGCAGGGTCACCTaGGATTTCGTATCTTTGTCTCCAAAGGGAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LNLTWSPSSRVT*DFVSLSPKGSS Trigger: AGAACTTCCCTTTGGAGACAAAGATACGAAATCCAAGGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 72 bp | AGTTGTTACGAGGTTTGTTCCTTGCCTGATCTGAACTaGAAGCAGCAGTTTCAGGTGGTAAAGTCTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SCYEVCSLPDLN*KQQFQVVKSVL Trigger: CAGAACAGACTTTACCACCTGAAACTGCTGCTTCAAGTTCAGATCAGGCAAGGAACAAACCTCGTAACAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000524652.1 ENST00000525132.1 ENST00000525878.5 ENST00000525970.5 ENST00000530886.5 ENST00000533818.5 ENST00000610726.4 |
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| CDS CAA 90 bp | TCTTTGTCTCCAAAGGGAAGTTCTTTAGGGATCACAAAGTCAACTTaGATGCGTCCTGGCAATGGGTCATTCTGGTTTTTACTGGGTACT | + |
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Preference number: 6 (lower is better) Translates to: SLSPKGSSLGITKST*MRPGNGSFWFLLGT Trigger: AGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGCATCAAAGTTGACTTTGTGATCCCTAAAGAACTTCCCTTTGGAGACAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS TCA 72 bp | CAGTTTTTCAATAACCCCAGTTTCACGCAGTGCTGCTaGAGTACCATTAGGGTACCCATTATGTCCATTGTT | + |
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Preference number: 6 (lower is better) Translates to: QFFNNPSFTQCC*STIRVPIMSIV Trigger: AACAATGGACATAATGGGTACCCTAATGGTACTTCAGCAGCACTGCGTGAAACTGGGGTTATTGAAAAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000525878.5 ENST00000534389.2 ENST00000534699.5 ENST00000610726.4 |
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| CDS GCA 72 bp | GAATTACGACCTAAAAGTCGCACACAAGTTGCAACCTaGTGTCCAGGCCTCTGTTTGTCACTAATACTAAAT | + |
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Preference number: 6 (lower is better) Translates to: ELRPKSRTQVAT*CPGLCLSLILN Trigger: ATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGGTTGCAACTTGTGTGCGACTTTTAGGTCGTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS GCA 72 bp | TGTTACACTTCATACCAACAACGTTCAGATATTCTTTaGAGATTCAAGCCTGTTTCAGGGAGCGTTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: CYTSYQQRSDIL*RFKPVSGSVLC Trigger: GCAGAGAACGCTCCCTGAAACAGGCTTGAATCTGCAAAGAATATCTGAACGTTGTTGGTATGAAGTGTAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524652.1 |
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| CDS CCA 72 bp | ACCACAGTAAACTCTACTTCATCTGCAATATGGAGCTaGTTCCCATCCAGAATTTCACTGAAGTGGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: TTVNSTSSAIWS*FPSRISLKWKN Trigger: GTTCTTCCACTTCAGTGAAATTCTGGATGGGAACCAGCTCCATATTGCAGATGAAGTAGAGTTTACTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 72 bp | CCAAAGGGAAGTTCTTTAGGGATCACAAAGTCAACTTaGATGCGTCCTGGCAATGGGTCATTCTGGTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: PKGSSLGITKST*MRPGNGSFWFL Trigger: TAAAAACCAGAATGACCCATTGCCAGGACGCATCAAAGTTGACTTTGTGATCCCTAAAGAACTTCCCTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 72 bp | TTCTTTGGTCTTGTTAGTTGTTACGAGGTTTGTTCCTaGCCTGATCTGAACTTGAAGCAGCAGTTTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: FFGLVSCYEVCS*PDLNLKQQFQV Trigger: CACCTGAAACTGCTGCTTCAAGTTCAGATCAGGCAAGGAACAAACCTCGTAACAACTAACAAGACCAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000524652.1 ENST00000525132.1 ENST00000525878.5 ENST00000525970.5 ENST00000530886.5 ENST00000533818.5 ENST00000610726.4 |
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| CDS CAA 72 bp | ACTGTAATTAAGTCAAAAGATGAGAAGAAACCACACTaGGTGGGCAGACAGCAAGCACTTGCAAAGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: TVIKSKDEKKPH*VGRQQALAKEC Trigger: ACACTCCTTTGCAAGTGCTTGCTGTCTGCCCACCAAGTGTGGTTTCTTCTCATCTTTTGACTTAATTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483407.1 |
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| CDS CAA 90 bp | GTTGAAATATTAAACCTAACATGGTCACCTTCCAGCAGGGTCACCTaGGATTTCGTATCTTTGTCTCCAAAGGGAAGTTCTTTAGGGATC | + |
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Preference number: 6 (lower is better) Translates to: VEILNLTWSPSSRVT*DFVSLSPKGSSLGI Trigger: GATCCCTAAAGAACTTCCCTTTGGAGACAAAGATACGAAATCCAAGGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATTTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 90 bp | ATTTCACTGAAGTGGAAGAACATACGAACATCACGATCCACACACTaGATGAAACCAAAACCATCTCTCATGGCAGCAATCACACCCATT | + |
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Preference number: 6 (lower is better) Translates to: ISLKWKNIRTSRSTH*MKPKPSLMAAITPI Trigger: AATGGGTGTGATTGCTGCCATGAGAGATGGTTTTGGTTTCATCAAGTGTGTGGATCGTGATGTTCGTATGTTCTTCCACTTCAGTGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 90 bp | AGTGTACTCTTCTTTGGTCTTGTTAGTTGTTACGAGGTTTGTTCCTaGCCTGATCTGAACTTGAAGCAGCAGTTTCAGGTGGTAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: SVLFFGLVSCYEVCS*PDLNLKQQFQVVKS Trigger: AGACTTTACCACCTGAAACTGCTGCTTCAAGTTCAGATCAGGCAAGGAACAAACCTCGTAACAACTAACAAGACCAAAGAAGAGTACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000524652.1 ENST00000525132.1 ENST00000525878.5 ENST00000525970.5 ENST00000530886.5 ENST00000533818.5 ENST00000610726.4 |
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| CDS TCA 72 bp | GTTTTCCACCTAACTGCCCAAATGACTCACTTTTTATaGTGGGACTCTTGCCTCATATACCTAGCTAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: VFHLTAQMTHFL*WDSCLIYLARK Trigger: CTTTCTAGCTAGGTATATGAGGCAAGAGTCCCATCATAAAAAGTGAGTCATTTGGGCAGTTAGGTGGAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483407.1 |
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| CDS CCA 72 bp | TTCTTTAGGGATCACAAAGTCAACTTTGATGCGTCCTaGCAATGGGTCATTCTGGTTTTTACTGGGTACTTT | + |
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Preference number: 6 (lower is better) Translates to: FFRDHKVNFDAS*QWVILVFTGYF Trigger: AAAGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGCATCAAAGTTGACTTTGTGATCCCTAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CCA 72 bp | GAAGTACCATTAGGGTACCCATTATGTCCATTGTTGTaGAGAAGGTTTGGATCAAAGCTCATCTTAACACCT | + |
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Preference number: 6 (lower is better) Translates to: EVPLGYPLCPLL*RRFGSKLILTP Trigger: AGGTGTTAAGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACATAATGGGTACCCTAATGGTACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS CAA 90 bp | CTTATCTCCTATTTGAGGAGAAGTAGATCCTTCCACATCCTTGGCTaGAAAAGCAATAGTCAGTTTCACCCCACAGTCATCATAAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: LISYLRRSRSFHILG*KSNSQFHPTVIISN Trigger: ATTGCTTATGATGACTGTGGGGTGAAACTGACTATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTACTTCTCCTCAAATAGGAGATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 90 bp | AAACAAAGACTACTAGCAGCGTTGGGAAGTGCTCTTTCAAAGCTGTaGAGTAGGCACAAACTTCTTGTTTCAGATCAAGTGTTGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: KQRLLAALGSALSKL*SRHKLLVSDQVLCL Trigger: AAGACACAACACTTGATCTGAAACAAGAAGTTTGTGCCTACTCAACAGCTTTGAAAGAGCACTTCCCAACGCTGCTAGTAGTCTTTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000524652.1 ENST00000525132.1 ENST00000525878.5 ENST00000525970.5 ENST00000530886.5 ENST00000533818.5 ENST00000610726.4 |
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| CDS CAA 90 bp | ATAAAACACTTCTTGTCCATTCATTCGTTCTTCAGGGAGGATTTCTaGTTTTATCTTCACCAGTTTAACAGCAATGGGTTTCCCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: IKHFLSIHSFFREDF*FYLHQFNSNGFPSP Trigger: CGGACTGGGAAACCCATTGCTGTTAAACTGGTGAAGATAAAACAAGAAATCCTCCCTGAAGAACGAATGAATGGACAAGAAGTGTTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000369530.5 ENST00000525132.1 ENST00000529046.5 ENST00000530886.5 |
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| CDS CAA 90 bp | GAGAAGGTTTGGATCAAAGCTCATCTTAACACCTGTCTCACAGAGTaGTTGAGATGGTTAAATGAGTTGCTGCACGTAAAAAGCCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: EKVWIKAHLNTCLTE*LRWLNELLHVKSLK Trigger: TTTTAGGCTTTTTACGTGCAGCAACTCATTTAACCATCTCAACAACTCTGTGAGACAGGTGTTAAGATGAGCTTTGATCCAAACCTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS CCA 72 bp | GCTCATCTTAACACCTGTCTCACAGAGTTGTTGAGATaGTTAAATGAGTTGCTGCACGTAAAAAGCCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: AHLNTCLTELLR*LNELLHVKSLK Trigger: TTTTAGGCTTTTTACGTGCAGCAACTCATTTAACCATCTCAACAACTCTGTGAGACAGGTGTTAAGATGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS TCA 72 bp | GCAATCACACCCATTTCTCGGGCTTCATTAGTGAACTaGAATGTATTTGACAGAACTTCTATATTGGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: AITPISRASLVN*NVFDRTSILVA Trigger: AGCAACCAATATAGAAGTTCTGTCAAATACATTTCAGTTCACTAATGAAGCCCGAGAAATGGGTGTGATTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS TCA 72 bp | CTTACTAACTGCTATCCATCCAACATTTCTCCATATTaGCCATTATGCTATCATGAGCTAGTCTGCCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LTNCYPSNISPY*PLCYHELVCQV Trigger: AACTTGGCAGACTAGCTCATGATAGCATAATGGTCAATATGGAGAAATGTTGGATGGATAGCAGTTAGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS GCA 72 bp | GGCTGTTTCAATAAATCCAAAATTATCCTTCAGAGTTaGCACATAACCCAAGAGCCTCTTGGAGTTAGAATT | + |
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Preference number: 6 (lower is better) Translates to: GCFNKSKIILQS*HITQEPLGVRI Trigger: AATTCTAACTCCAAGAGGCTCTTGGGTTATGTGGCAACTCTGAAGGATAATTTTGGATTTATTGAAACAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000483030.1 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS TCA 72 bp | ATCCAACATTTCTCCATATTGACCATTATGCTATCATaGGCTAGTCTGCCAAGTTATTTATTCACTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: IQHFSILTIMLS*ASLPSYLFTGS Trigger: AGAGCCAGTGAATAAATAACTTGGCAGACTAGCTCATGATAGCATAATGGTCAATATGGAGAAATGTTGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534389.2 |
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| CDS CAA 72 bp | AATTCAACATCATCTCCTACTTTTAAGTCTTGCAGGTaGCCATTATACTGTGAACAGTGGAAGAAAAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: NSTSSPTFKSCR*PLYCEQWKKSL Trigger: TAGACTTTTCTTCCACTGTTCACAGTATAATGGCAACCTGCAAGACTTAAAAGTAGGAGATGATGTTGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000534389.2 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 72 bp | TTTGACAGAACTTCTATATTGGTTGCTCGCTCTAATTaGTCACGTCGGTCTGTTGAAATATTAAACCTAACA | + |
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Preference number: 6 (lower is better) Translates to: FDRTSILVARSN*SRRSVEILNLT Trigger: TGTTAGGTTTAATATTTCAACAGACCGACGTGACAAATTAGAGCGAGCAACCAATATAGAAGTTCTGTCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000261443.9 ENST00000339438.10 ENST00000358528.9 ENST00000369530.5 ENST00000438362.6 ENST00000530886.5 ENST00000534699.5 ENST00000610726.4 |
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| CDS CAA 72 bp | ACACTTCATACTTTCAAGTTACGAAAGATATTCCTGTaGTGTCAGGTAATCAAAGAGGGTGGATCAGTAATT | + |
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Preference number: 6 (lower is better) Translates to: TLHTFKLRKIFL*CQVIKEGGSVI Trigger: AATTACTGATCCACCCTCTTTGATTACCTGACACAACAGGAATATCTTTCGTAACTTGAAAGTATGAAGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525878.5 |
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