RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSAD (Homo sapiens)

Ensembl gene IDs: ENSG00000139631

Ensembl transcript IDs: ENST00000267085.8, ENST00000379843.7, ENST00000379846.5, ENST00000379850.7, ENST00000424845.5, ENST00000424990.5, ENST00000437073.5, ENST00000444623.6, ENST00000453446.6, ENST00000461392.1, ENST00000472908.1, ENST00000475890.5, ENST00000483632.5, ENST00000485004.5, ENST00000490589.5, ENST00000490923.5, ENST00000491654.1, ENST00000498635.1, ENST00000548698.5

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTaGCTTCCACATGAGCCACAGCTTCAGACAGTCCACACGGCGGCC +
Preference number: 1 (lower is better)
Translates to: DKGLVDAPLQPLIAL*LPHEPQLQTVHTAA
Trigger: GGCCGCCGTGTGGACTGTCTGAAGCTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR TCA 90 bp TACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTaGTCGCCCTGTGCCTTCCACATGAGCCACAGCTTCAGACAGTCC +
Preference number: 1 (lower is better)
Translates to: YRARTKAWSMRRSSP*SPCAFHMSHSFRQS
Trigger: GGACTGTCTGAAGCTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR TCA 90 bp GATTCCAGGCCACAGAGTCAGCCATCCACATGCAGCCATAGCCCATaGCGCTGGCACACATCAGCAATTGCCTCCAGGGGGTCAAAGGCC +
Preference number: 1 (lower is better)
Translates to: DSRPQSQPSTCSHSP*RWHTSAIASRGSKA
Trigger: GGCCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCATGTGGATGGCTGACTCTGTGGCCTGGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR GCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGACACGGCGGCCACACTaGACCACCTTGTCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQTRRPH*TTLSPV
Trigger: CACGGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGT...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGCTGGCCTGGGACCCATaGCAGCGCTTGAGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQLAWDP*QRLSRF
Trigger: GAACCTGCTCAAGCGCTGCCATGGGTCCCAGGCCAG...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR GCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGAGAGCATTGCAGGCCTaGTGCGAGGAGCTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQRALQA*CEELVG
Trigger: CCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCT...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR GCA 90 bp TCGGGGACCATTTTCCCTCTCTCATCAGCCTTGACCACTCGGACACTGTCGGTGCCAGGGGCGGCAGTGTaGGGAGGCCCCTCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: SGTIFPLSSALTTRTLSVPGAAV*GGPSAC
Trigger: GCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGG...CACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAAAATGGTCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424845.5
3UTR CAA 90 bp GTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTaGATCGCCCTGTGCCTTCCACATGAGCCACAGCTTCAGACAGTC +
Preference number: 2 (lower is better)
Translates to: VPGKDKGLVDAPLQP*IALCLPHEPQLQTV
Trigger: GACTGTCTGAAGCTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR TCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCATCTGCCCCAACCTCCTaGGTAGCTGGGTTTACAGGC +
Preference number: 2 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPSAPTS*VAGFTG
Trigger: GCCTGTAAACCCAGCTACTCAGGAGGTTGGGGCAGA...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR TCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGACCCATGGCAGCGCTTaGGCAGGTTCGAGGTATCCT +
Preference number: 2 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQTHGSA*AGSRYP
Trigger: AGGATACCTCGAACCTGCTCAAGCGCTGCCATGGGT...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR GCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGGCATTGCAGGCCTGCTaGGAGGAGCTTGTGGGGATT +
Preference number: 2 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQALQAC*EELVGI
Trigger: AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGC...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR GCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCAAGAAGTGCAGAGCATTaGAGGCCTGCTGCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPRSAEH*RPAARS
Trigger: GCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCT...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTCTGGCCTGGGACCCATaGCAGCGCTTGAGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTLAWDP*QRLSRF
Trigger: GAACCTGCTCAAGCGCTGCCATGGGTCCCAGGCCAG...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR TCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCTGCAGCCATAGCCCATaGCGCTGGCACACATCAGCA +
Preference number: 2 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPCSHSP*RWHTSA
Trigger: TGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCA...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR GCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCAGAAGTGCAGAGCATTaGAGGCCTGCTGCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLRSAEH*RPAARS
Trigger: GCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCT...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTGCTGCGAGGAGCTTGTaGGGATTCCAGGCCACAGAG +
Preference number: 2 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTAARSL*GFQATE
Trigger: CTCTGTGGCCTGGAATCCCCACAAGCTCCTCGCAGC...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CCA 90 bp GGGGCGGCAGTGTGCGGAGGCCCCTCTGCTTGCAATCCGGGTAGCGCTGATAGCCATACATGTTGGAGATaGAGCCACAAACCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GAAVCGGPSACNPGSADSHTCWR*SHKPGQ
Trigger: CTGCCCTGGTTTGTGGCTCCATCTCCAACATGTATG...GCTATCAGCGCTACCCGGATTGCAAGCAGAGGGGCCTCCGCACACTGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424845.5
3UTR-3UTR CCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCAAACCTCCTGAGTAGCTaGGTTTACAGGCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPNLLSS*VYRHRP
Trigger: TGGCCTGTGCCTGTAAACCCAGCTACTCAGGAGGTT...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR CAA 90 bp GCGCTTGAGCAGGTTCGAGGTATCCTGGAGAAGAAGTGCAGAGCATaGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTCCAGGCCACAGA +
Preference number: 2 (lower is better)
Translates to: ALEQVRGILEKKCRA*QACCEELVGIPGHR
Trigger: TCTGTGGCCTGGAATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAGGATACCTCGAACCTGCTCAAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR TCA 90 bp TCGGGGACCATTTTCCCTCTCTCATCAGCCTTGACCACTCGGACACTGTCGGTGGCACCTCCTCTTCCATaGGCACAAACACGGGGGCGA +
Preference number: 2 (lower is better)
Translates to: SGTIFPLSSALTTRTLSVAPPLP*AQTRGR
Trigger: TCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGC...CACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAAAATGGTCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424845.5
3UTR-3UTR TCA 90 bp TCGGGGACCATTTTCCCTCTCTCATCAGCCTTGACCACTCGGACACTGTCGGTGGACACTCCTTCGATGTaGATAGGGCCAGGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: SGTIFPLSSALTTRTLSVDTPSM*IGPGAA
Trigger: TGCCGCCCCTGGCCCTATTCACATCGAAGGAGTGTC...CACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAAAATGGTCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424845.5
3UTR-3UTR GCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGCCCTTGATCGCCCTGTaGCTTCCACATGAGCCACAG +
Preference number: 2 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLPLIAL*LPHEPQ
Trigger: CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGG...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR GCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGGGTTCAAGCAATTCTaGCCCAACCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLGFKQF*PNLLSS
Trigger: GCTACTCAGGAGGTTGGGGCAGAATTGCTTGAACCC...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCAGGTTCGAGGTATCCTaGAGAAGAAGTGCAGAGCAT +
Preference number: 2 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPRFEVS*RRSAEH
Trigger: ATGCTCTGCACTTCTTCTCCAGGATACCTCGAACCT...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CCA 90 bp CATTTTCCCTCTCTCATCAGCCTTGACCACTCGGACACTGTCGGTGCCAAGTCCCAGCTCCCTTCTGGATaGAGTAGTGACACTCCTTCG +
Preference number: 2 (lower is better)
Translates to: HFPSLISLDHSDTVGAKSQLPSG*SSDTPS
Trigger: CGAAGGAGTGTCACTACTCCATCCAGAAGGGAGCTG...GGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424845.5
3UTR-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTTGCCCAGCCTGGAGTaGAGGGGTGCAATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFLPSLE*RGAISA
Trigger: AGCCGAGATTGCACCCCTGCACTCCAGGCTGGGCAA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
3UTR-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTCTGCGGGTGAGGGGTaGTATCAAGGCCGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFSAGEG*YQGRQQ
Trigger: TTGCTGCCGGCCTTGATACCACCCCTCACCCGCAGA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
3UTR-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTCTGCCCCAACCTCCTaGGTAGCTGGGTTTACAGGC +
Preference number: 2 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFSAPTS*VAGFTG
Trigger: GCCTGTAAACCCAGCTACTCAGGAGGTTGGGGCAGA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
3UTR-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTGCAGCCATAGCCCATaGCGCTGGCACACATCAGCA +
Preference number: 2 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFCSHSP*RWHTSA
Trigger: TGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCTGGAGTGCAGGGGTaGAATCTCGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPGVQG*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACCCCTGCACTCCAGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
3UTR-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAGAGTCTCGTACTGTTaGCCAGCCTGGAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFRVSYC*PAWSAG
Trigger: CCCTGCACTCCAGGCTGGGCAACAGTACGAGACTCT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
3UTR-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCATTGCAGGCCTGCTaGGAGGAGCTTGTGGGGATT +
Preference number: 2 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFALQAC*EELVGI
Trigger: AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGGGTTCAAGCAATTCTaGCCCAACCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFGFKQF*PNLLSS
Trigger: GCTACTCAGGAGGTTGGGGCAGAATTGCTTGAACCC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
3UTR-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAACCTCCTGAGTAGCTaGGTTTACAGGCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFNLLSS*VYRHRP
Trigger: TGGCCTGTGCCTGTAAACCCAGCTACTCAGGAGGTT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
3UTR GCA 72 bp GGGCCAGGGGCGGCAGTGTGCGGAGGCCCCTCTGCTTaGAATCCGGGTAGCGCTGATAGCGGGCCAGATTTA +
Preference number: 3 (lower is better)
Translates to: GPGAAVCGGPSA*NPGSADSGPDL
Trigger: TAAATCTGGCCCGCTATCAGCGCTACCCGGATTGCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424845.5
3UTR-3UTR CAA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCAGACCCATGGCAGCGCTaGAGCAGGTTCGAGGTATCC +
Preference number: 3 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPDPWQR*SRFEVS
Trigger: GGATACCTCGAACCTGCTCAAGCGCTGCCATGGGTC...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CAA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTCCTGCTGCGAGGAGCTaGTGGGGATTCCAGGCCACA +
Preference number: 3 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTPAARS*WGFQAT
Trigger: TGTGGCCTGGAATCCCCACAAGCTCCTCGCAGCAGG...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CAA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCAAAGAAGTGCAGAGCATaGCAGGCCTGCTGCGAGGAG +
Preference number: 3 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPKKCRA*QACCEE
Trigger: CTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTT...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR GCA 72 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTaGACCACCTTGTCTCCCGTGTCCAGAGCCACATCG +
Preference number: 3 (lower is better)
Translates to: SHSFRQSTRRPH*TTLSPVSRATS
Trigger: CGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR GCA 72 bp CTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTaGCTTCCACATGAGCCACAGCTTCAGACAGTCCAC +
Preference number: 3 (lower is better)
Translates to: LVDAPLQPLIAL*LPHEPQLQTVH
Trigger: GTGGACTGTCTGAAGCTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CAA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCAAGAAGTGCAGAGCATaGCAGGCCTGCTGCGAGGAG +
Preference number: 3 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPKKCRA*QACCEE
Trigger: CTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTT...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CAA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTGGCACACATCAGCAATaGCCTCCAGGGGGTCAAAGG +
Preference number: 3 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTGTHQQ*PPGGQR
Trigger: CCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCC...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CAA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCCCTGCTGCGAGGAGCTaGTGGGGATTCCAGGCCACA +
Preference number: 3 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVPAARS*WGFQAT
Trigger: TGTGGCCTGGAATCCCCACAAGCTCCTCGCAGCAGG...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR TCA 72 bp CCACAGAGTCAGCCATCCACATGCAGCCATAGCCCATaGCGCTGGCACACATCAGCAATTGCCTCCAGGGGG +
Preference number: 3 (lower is better)
Translates to: PQSQPSTCSHSP*RWHTSAIASRG
Trigger: CCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCATGTGGATGGCTGACTCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CAA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCGGCACACATCAGCAATaGCCTCCAGGGGGTCAAAGG +
Preference number: 3 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVGTHQQ*PPGGQR
Trigger: CCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCC...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCGCCGCTCCAGCCCTaGATCGCCCTGTGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFAPLQP*IALCLP
Trigger: TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR CCA 72 bp AGCGCTGATAGCGGGCCAGATTTACAGCATACATGTTaGAGATGGAGCCACAAACCAGGGCAGAAGATTCCG +
Preference number: 3 (lower is better)
Translates to: SADSGPDLQHTC*RWSHKPGQKIP
Trigger: CGGAATCTTCTGCCCTGGTTTGTGGCTCCATCTCCAACATGTATGCTGTAAATCTGGCCCGCTATCAGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424845.5
3UTR-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCACACTGCACCACCTaGTCTCCCGTGTCCAGAGCC +
Preference number: 3 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPHCTT*SPVSRA
Trigger: GGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
3UTR-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCAGAGTCTCGTACTGTaGCCCAGCCTGGAGTGCAGG +
Preference number: 3 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFQSLVL*PSLECR
Trigger: CCTGCACTCCAGGCTGGGCAACAGTACGAGACTCTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGCCAGGGGCGGCAGTGTaGGGAGGCCCCTCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQPGAAV*GGPSAC
Trigger: GCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGG...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GTGGTGCCAGAGGTGGCACTGACCAGGAACGGCACAGCACCCTCAGCCTCGGCCTGCCAGAGGTGGCACTaGCCAGGAACGGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: VVPEVALTRNGTAPSASACQRWH*PGTAQH
Trigger: GTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCA...GGCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR TCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGTGCCAGAGGTGGCACTaGCCAGGAACGGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVCQRWH*PGTAQH
Trigger: GTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCA...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCACCTCCTTCGATGTaGATAGGGCCAGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVPPPSM*IGPGAA
Trigger: TGCCGCCCCTGGCCCTATTCACATCGAAGGAGGTGG...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCAGGGTTGGGCCTGTaGCTCTTCCCCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVPGLGL*LFPTSF
Trigger: GAAGGAGGTGGGGAAGAGGCACAGGCCCAACCCTGG...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGTCAGGAGCCCAGGGTTaGGCCTGTGCCTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVSGAQG*ACASSP
Trigger: TGGGGAAGAGGCACAGGCCCAACCCTGGGCTCCTGA...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGCAGGATCTGCTTCTGTaGCTCGCCCTGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQQDLLL*LALAPQ
Trigger: CTGCGGAGCCAGGGCGAGTCACAGAAGCAGATCCTG...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GCCAGAGGTGGCACTGACCAGGAACGGCACAGCACCCTCAGCCTCGGCCATACCGCACCTCCTCTTCCATaGGCACAAACACGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: ARGGTDQERHSTLSLGHTAPPLP*AQTRGR
Trigger: TCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGC...GGTATGGCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR TCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTCGCCGCTCCAGCCCTTaGTCGCCCTGTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTRRSSP*SPCAFH
Trigger: GTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCG...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCACCGCTCCAGGATCTaGTTCTGTGACTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVHRSRI*FCDSPW
Trigger: CCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTG...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GCCTCGGCCATACCAATCTGCCTCTCCAGATCCTCGGGGACCATTTTCCCTCTCCCAGGGGCGGCAGTGTaGGGAGGCCCCTCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ASAIPICLSRSSGTIFPLPGAAV*GGPSAC
Trigger: GCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGG...GAGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR GCA 90 bp GTGGTGCCAGAGGTGGCACTGACCAGGAACGGCACAGCACCCTCAGCCTCGGCCCTCGGACACTGTCGGTaGCAAGTCCCAGAAACGCAG +
Preference number: 4 (lower is better)
Translates to: VVPEVALTRNGTAPSASALGHCR*QVPETQ
Trigger: CTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAG...GGCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR GCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCAACACGGCGGCCACACTaGACCACCTTGTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPTRRPH*TTLSPV
Trigger: CACGGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGT...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGGCAAGGACAAAGGCCTaGTCGATGCGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQARTKA*SMRRSS
Trigger: GCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGC...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GAGGTGGCACTGACCAGGAACGGCACAGCACCCTCAGCCTCGGCCATACCAATCCAGGATCTGCTTCTGTaGCTCGCCCTGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: EVALTRNGTAPSASAIPIQDLLL*LALAPQ
Trigger: CTGCGGAGCCAGGGCGAGTCACAGAAGCAGATCCTG...GATTGGTATGGCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR TCA 90 bp GTGGTGCCAGAGGTGGCACTGACCAGGAACGGCACAGCACCCTCAGCCTCGGCCCAGAGAAGAGCTGGTTaGAGAACCGAGGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: VVPEVALTRNGTAPSASAQRRAG*RTEGDQ
Trigger: CTGGTCACCCTCGGTTCTTCAACCAGCTCTTCTCTG...GGCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR TCA 90 bp AGTGGTGCCAGAGGTGGCACTGACCAGGAACGGCACAGCACCCTCAGCCTCGGCCTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGG +
Preference number: 4 (lower is better)
Translates to: SGARGGTDQERHSTLSLGLSHQP*PLGHCR
Trigger: CCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAG...GCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCACCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR TCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGACCCATGGCAGCGCTTaGGCAGGTTCGAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVTHGSA*AGSRYP
Trigger: AGGATACCTCGAACCTGCTCAAGCGCTGCCATGGGT...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GAGCCACAAACCAGGGCAGAAGATTCCGTCCCCAGAGCTCCAGCCCACCAGGGCGGAGGCCCCTCTGCTTaGAATCCGGGTAGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: EPQTRAEDSVPRAPAHQGGGPSA*NPGSAD
Trigger: ATCAGCGCTACCCGGATTGCAAGCAGAGGGGCCTCC...GCCCTGGTGGGCTGGAGCTCTGGGGACGGAATCTTCTGCCCTGGTTTGTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR GCA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCCCAGGGGCGGCAGTGTaGGGAGGCCCCTCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVPGAAV*GGPSAC
Trigger: GCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGG...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GCCAGAGGTGGCACTGACCAGGAACGGCACAGCACCCTCAGCCTCGGCCATACCTCGGCCATACCAATCTaGCTCTCCAGATCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ARGGTDQERHSTLSLGHTSAIPI*LSRSSG
Trigger: CCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGA...GGTATGGCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR GCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCAAGAGCATTGCAGGCCTaGTGCGAGGAGCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPRALQA*CEELVG
Trigger: CCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCT...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCACACGGCGGCCACACTaGACCACCTTGTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPTRRPH*TTLSPV
Trigger: CACGGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGT...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCCCAGGGTTGGGCCTGTaGCTCTTCCCCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPPGLGL*LFPTSF
Trigger: GAAGGAGGTGGGGAAGAGGCACAGGCCCAACCCTGG...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp TGGAGCCACAAACCAGGGCAGAAGATTCCGTCCCCAGAGCTCCAGCCCACCAGGGAGCCGGAGGCAGGGTaGACAGGTAGCTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: WSHKPGQKIPSPELQPTREPEAG*TGSSSG
Trigger: TCCTGAGGAGCTACCTGTGCACCCTGCCTCCGGCTC...CCTGGTGGGCTGGAGCTCTGGGGACGGAATCTTCTGCCCTGGTTTGTGGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR CCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGTTCTGTGACTCGCCCTaGCTCCGCAGCTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVFCDSP*LRSSKS
Trigger: GGATTTGGAGCTGCGGAGCCAGGGCGAGTCACAGAA...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCCTGGCCTGGGACCCATaGCAGCGCTTGAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPLAWDP*QRLSRF
Trigger: GAACCTGCTCAAGCGCTGCCATGGGTCCCAGGCCAG...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCTCAGGAGCCCAGGGTTaGGCCTGTGCCTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLSGAQG*ACASSP
Trigger: TGGGGAAGAGGCACAGGCCCAACCCTGGGCTCCTGA...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GTGGTGCCAGAGGTGGCACTGACCAGGAACGGCACAGCACCCTCAGCCTCGGCCGAGGGTGACCAGTCTTaGCACTGTAGCGAATCACAG +
Preference number: 4 (lower is better)
Translates to: VVPEVALTRNGTAPSASAEGDQS*HCSESQ
Trigger: CTGTGATTCGCTACAGTGTCAAGACTGGTCACCCTC...GGCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR TCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGCTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGG +
Preference number: 4 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQLSHQP*PLGHCR
Trigger: CCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAG...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTCGCCGCTCCAGCCCTTaGTCGCCCTGTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LEKKCRALQACCEELVGIRRSSP*SPCAFH
Trigger: GTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCG...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTCCACCTCCTTCGATGTaGATAGGGCCAGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTPPPSM*IGPGAA
Trigger: TGCCGCCCCTGGCCCTATTCACATCGAAGGAGGTGG...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCCACCGCTCCAGGATCTaGTTCTGTGACTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPHRSRI*FCDSPW
Trigger: CCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTG...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACCCTTGATCGCCCTGTaGCTTCCACATGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPPLIAL*LPHEPQ
Trigger: CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGG...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCCAAAGGCCTGGTCGATaGGCCGCTCCAGCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPQRPGR*AAPALD
Trigger: ATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTG...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACCTGGAGTGCAGGGGTaGAATCTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPPGVQG*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACCCCTGCACTCCAGG...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCTTGCCCAGCCTGGAGTaGAGGGGTGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLLPSLE*RGAISA
Trigger: AGCCGAGATTGCACCCCTGCACTCCAGGCTGGGCAA...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCGCTGCGAGGAGCTTGTaGGGATTCCAGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPAARSL*GFQATE
Trigger: CTCTGTGGCCTGGAATCCCCACAAGCTCCTCGCAGC...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCGCTTCCCTCGCAGGCTaGGGGGTACGAACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPASLAG*GVRTRN
Trigger: GTTTCTGGTTCGTACCCCCCAGCCTGCGAGGGAAGC...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACAGAGAAGAGCTGGTTaGAGAACCGAGGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPQRRAG*RTEGDQ
Trigger: CTGGTCACCCTCGGTTCTTCAACCAGCTCTTCTCTG...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTGCACCTCCTCTTCCATaGGCACAAACACGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTAPPLP*AQTRGR
Trigger: TCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGC...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCAAACTCAGGCTCCATaGCTAGCTCAAACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVQTQAP*LAQTLP
Trigger: GGGAAGGGTTTGAGCTAGTCATGGAGCCTGAGTTTG...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCCCATCAGGATCTCTCTaGTCAGGAGAGCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPPSGSL*SGEPEA
Trigger: TGCCTCCGGCTCTCCTGAGCAGAGAGATCCTGATGG...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCCTCGGACACTGTCGGTaGCAAGTCCCAGAAACGCAG +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPLGHCR*QVPETQ
Trigger: CTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAG...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCTCGGCCATACCAATCTaGCTCTCCAGATCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPSAIPI*LSRSSG
Trigger: CCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGA...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCTCGGCCATACCAATCTaGCTCTCCAGATCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLSAIPI*LSRSSG
Trigger: CCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGA...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCAGAAGTGCAGAGCATTaGAGGCCTGCTGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPRSAEH*RPAARS
Trigger: GCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCT...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCCCTGGAGTGCAGGGGTaGAATCTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPPGVQG*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACCCCTGCACTCCAGG...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GTGGTGCCAGAGGTGGCACTGACCAGGAACGGCACAGCACCCTCAGCCTCGGCCCACTCACAGACCTTCTaGGAGACACTGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VVPEVALTRNGTAPSASAHSQTF*ETLVPF
Trigger: GAAAGGAACCAGTGTCTCCCAGAAGGTCTGTGAGTG...GGCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR CCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGCGCCCGGCCAGAGCATaGGGATCCAACCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLRPARA*GSNPEK
Trigger: CTTCTCTGGGTTGGATCCCCATGCTCTGGCCGGGCG...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGCTGGCCTGGGACCCATaGCAGCGCTTGAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLLAWDP*QRLSRF
Trigger: GAACCTGCTCAAGCGCTGCCATGGGTCCCAGGCCAG...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTGGAGGGGAGTGCTTCTaGGTCAGCCATCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTGGECF*VSHQDL
Trigger: GAGATCCTGATGGCTGACTCAGAAGCACTCCCCTCC...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp TCAGCCTTGACCACTCGGACACTGTCGGTGCCAAGTCCCAGAAACGCAGCTCCCGGAGGGGAGTGCTTCTaGGTCAGCCATCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: SALTTRTLSVPSPRNAAPGGECF*VSHQDL
Trigger: GAGATCCTGATGGCTGACTCAGAAGCACTCCCCTCC...GGGAGCTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR TCA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTCAGGATCTGCTTCTGTaGCTCGCCCTGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LEKKCRALQACCEELVGIQDLLL*LALAPQ
Trigger: CTGCGGAGCCAGGGCGAGTCACAGAAGCAGATCCTG...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGGAGGGTGACCAGTCTTaGCACTGTAGCGAATCACAG +
Preference number: 4 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQEGDQS*HCSESQ
Trigger: CTGTGATTCGCTACAGTGTCAAGACTGGTCACCCTC...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTCTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGG +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTLSHQP*PLGHCR
Trigger: CCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAG...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GGCCCGCAGTTTCCTCAGCACCTCCTCTTCCATGAGCACAAACACGGGGGCGATCTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGG +
Preference number: 4 (lower is better)
Translates to: GPQFPQHLLFHEHKHGGDLSHQP*PLGHCR
Trigger: CCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAG...ATCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGCTGAGGAAACTGCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR TCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTACCCATGGCAGCGCTTaGGCAGGTTCGAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTTHGSA*AGSRYP
Trigger: AGGATACCTCGAACCTGCTCAAGCGCTGCCATGGGT...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTCTGCCCCAACCTCCTaGGTAGCTGGGTTTACAGGC +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTSAPTS*VAGFTG
Trigger: GCCTGTAAACCCAGCTACTCAGGAGGTTGGGGCAGA...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCGGCGTGAGCCACCTTTaGCAGCCTTTCGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLGVSHL*QPFVVI
Trigger: GATTACCACGAAAGGCTGTCAAAGGTGGCTCACGCC...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379843.7
CDS-3UTR TCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCTGGGATTACAGGCGTaGGCCACCTTTGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLLGLQA*ATFDSL
Trigger: AAGGCTGTCAAAGGTGGCTCACGCCTGTAATCCCAG...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379843.7
CDS-3UTR GCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTCTCGGACACTGTCGGTaGCAAGTCCCAGAAACGCAG +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTLGHCR*QVPETQ
Trigger: CTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAG...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCAGGGTTCAAGCAATTCTaGCCCAACCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPGFKQF*PNLLSS
Trigger: GCTACTCAGGAGGTTGGGGCAGAATTGCTTGAACCC...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp CCACAAACCAGGGCAGAAGATTCCGTCCCCAGAGCTCCAGCCCACCAGGGCCCGCCTTCTGGGAGACACTaGTTCCTTTCTGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: PQTRAEDSVPRAPAHQGPPSGRH*FLSEWP
Trigger: AGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGG...CGGGCCCTGGTGGGCTGGAGCTCTGGGGACGGAATCTTCTGCCCTGGTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR CCA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTCGCCCGGCCAGAGCATaGGGATCCAACCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LEKKCRALQACCEELVGIRPARA*GSNPEK
Trigger: CTTCTCTGGGTTGGATCCCCATGCTCTGGCCGGGCG...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp AGCCTCGGCCATACCAATCTGCCTCTCCAGATCCTCGGGGACCATTTTCCCTCTCGCCCGGCCAGAGCATaGGGATCCAACCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLGHTNLPLQILGDHFPSRPARA*GSNPEK
Trigger: CTTCTCTGGGTTGGATCCCCATGCTCTGGCCGGGCG...AGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR CCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCATACATGTTGGAGATaGAGCCACCAGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVHTCWR*SHQGRR
Trigger: TCTTCTGCCCTGGTGGCTCCATCTCCAACATGTATG...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCGCAAGGACAAAGGCCTaGTCGATGCGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVARTKA*SMRRSS
Trigger: GCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGC...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp CCACAAACCAGGGCAGAAGATTCCGTCCCCAGAGCTCCAGCCCACCAGGGCCCGACACTGGTTCCTTTCTaGATGGCCTCATCCACAACA +
Preference number: 4 (lower is better)
Translates to: PQTRAEDSVPRAPAHQGPTLVPF*MASSTT
Trigger: TGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGT...CGGGCCCTGGTGGGCTGGAGCTCTGGGGACGGAATCTTCTGCCCTGGTTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR TCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGTGCAGCCATAGCCCATaGCGCTGGCACACATCAGCA +
Preference number: 4 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLCSHSP*RWHTSA
Trigger: TGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCA...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAAACTCAGGCTCCATaGCTAGCTCAAACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLQTQAP*LAQTLP
Trigger: GGGAAGGGTTTGAGCTAGTCATGGAGCCTGAGTTTG...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGTCTGCCCCAACCTCCTaGGTAGCTGGGTTTACAGGC +
Preference number: 4 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLSAPTS*VAGFTG
Trigger: GCCTGTAAACCCAGCTACTCAGGAGGTTGGGGCAGA...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp AGCCTCGGCCATACCAATCTGCCTCTCCAGATCCTCGGGGACCATTTTCCCTCTCACCGCTCCAGGATCTaGTTCTGTGACTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLGHTNLPLQILGDHFPSHRSRI*FCDSPW
Trigger: CCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTG...AGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR GCA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCGGAGGCCCCTCTGCTTaGAATCCGGGTAGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVGGPSA*NPGSAD
Trigger: ATCAGCGCTACCCGGATTGCAAGCAGAGGGGCCTCC...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTCAAAGGCCTGGTCGATaGGCCGCTCCAGCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LEKKCRALQACCEELVGIQRPGR*AAPALD
Trigger: ATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTG...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGAGAGTCTCGTACTGTTaGCCAGCCTGGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLRVSYC*PAWSAG
Trigger: CCCTGCACTCCAGGCTGGGCAACAGTACGAGACTCT...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGTGGTTCCTTTCTGAATaGCCTCATCCACAACAACCC +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVWFLSE*PHPQQP
Trigger: GGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCA...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACCTTCTGGGAGACACTaGTTCCTTTCTGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPPSGRH*FLSEWP
Trigger: AGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGG...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATACATGTTGGAGATaGAGCCACCAGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPHTCWR*SHQGRR
Trigger: TCTTCTGCCCTGGTGGCTCCATCTCCAACATGTATG...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTGCTTCCCTCGCAGGCTaGGGGGTACGAACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LEKKCRALQACCEELVGIASLAG*GVRTRN
Trigger: GTTTCTGGTTCGTACCCCCCAGCCTGCGAGGGAAGC...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGTTGCGCAGGTCACTGTaGCCTAAAAAGGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVLRRSL*PKKAVL
Trigger: AAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAA...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCCAGCTCCCTTCTGGATaGAGTAGTGACATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPQLPSG*SSDMAG
Trigger: TCCAGCCATGTCACTACTCCATCCAGAAGGGAGCTG...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCAACACTGGTTCCTTTCTaGATGGCCTCATCCACAACA +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPTLVPF*MASSTT
Trigger: TGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGT...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGCAGAGAAGAGCTGGTTaGAGAACCGAGGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLQRRAG*RTEGDQ
Trigger: CTGGTCACCCTCGGTTCTTCAACCAGCTCTTCTCTG...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTGGGTTCAAGCAATTCTaGCCCAACCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTGFKQF*PNLLSS
Trigger: GCTACTCAGGAGGTTGGGGCAGAATTGCTTGAACCC...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCAGAGTCTCGTACTGTTaGCCAGCCTGGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVRVSYC*PAWSAG
Trigger: CCCTGCACTCCAGGCTGGGCAACAGTACGAGACTCT...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCCTTCTGGGAGACACTaGTTCCTTTCTGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLPSGRH*FLSEWP
Trigger: AGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGG...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCTTCTGTGACTCGCCCTaGCTCCGCAGCTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVFCDSP*LRSSKS
Trigger: GGATTTGGAGCTGCGGAGCCAGGGCGAGTCACAGAA...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp AGCCTCGGCCATACCAATCTGCCTCTCCAGATCCTCGGGGACCATTTTCCCTCTTTCTGTGACTCGCCCTaGCTCCGCAGCTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: SLGHTNLPLQILGDHFPSFCDSP*LRSSKS
Trigger: GGATTTGGAGCTGCGGAGCCAGGGCGAGTCACAGAA...AGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR CCA 90 bp TCAGCCTTGACCACTCGGACACTGTCGGTGCCAAGTCCCAGAAACGCAGCTCCCCAGCTCCCTTCTGGATaGAGTAGTGACACTCCTTCG +
Preference number: 4 (lower is better)
Translates to: SALTTRTLSVPSPRNAAPQLPSG*SSDTPS
Trigger: CGAAGGAGTGTCACTACTCCATCCAGAAGGGAGCTG...GGGAGCTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR CCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTAACCTCCTGAGTAGCTaGGTTTACAGGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTNLLSS*VYRHRP
Trigger: TGGCCTGTGCCTGTAAACCCAGCTACTCAGGAGGTT...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCATTGCGCAGGTCACTGTaGCCTAAAAAGGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPLRRSL*PKKAVL
Trigger: AAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAA...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GCCTCGGCCATACCAATCTGCCTCTCCAGATCCTCGGGGACCATTTTCCCTCTCCAGCTCCCTTCTGGATaGAGTAGTGACACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASAIPICLSRSSGTIFPLQLPSG*SSDTGQ
Trigger: CTGCCCTGTGTCACTACTCCATCCAGAAGGGAGCTG...GAGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR TCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCACACTGGTTCCTTTCTaGATGGCCTCATCCACAACA +
Preference number: 4 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLTLVPF*MASSTT
Trigger: TGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGT...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGAGGGTGACCAGTCTTaGCACTGTAGCGAATCACAG +
Preference number: 4 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLEGDQS*HCSESQ
Trigger: CTGTGATTCGCTACAGTGTCAAGACTGGTCACCCTC...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp ATCCTCGGGGACCATTTTCCCTCTCTCATCAGCCTTGACCACTCGGACACTGTCCTCGGACACTGTCGGTaGCAAGTCCCAGAAACGCAG +
Preference number: 4 (lower is better)
Translates to: ILGDHFPSLISLDHSDTVLGHCR*QVPETQ
Trigger: CTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAG...GACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAAAATGGTCCCCGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424845.5
3UTR CAA 72 bp CAGGTTCGAGGTATCCTGGAGAAGAAGTGCAGAGCATaGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: QVRGILEKKCRA*QACCEELVGIP
Trigger: TGGAATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAGGATACCTCGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR TCA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTAGGCGTGAGCCACTTTaGCAGCCTTTCGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: LEKKCRALQACCEELVGIRREPL*QPFVVI
Trigger: GATTACCACGAAAGGCTGTCAAAGTGGCTCACGCCT...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475890.5
CDS-3UTR GCA 90 bp GGTAGCGCTGATAGCGGGCCAGATTTACAGCATACATGTTGGAGATGGAGCCACTCGGCCATACCAATCTaGCTCTCCAGATCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GSADSGPDLQHTCWRWSHSAIPI*LSRSSG
Trigger: CCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGA...GTGGCTCCATCTCCAACATGTATGCTGTAAATCTGGCCCGCTATCAGCGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR GCA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGAAAGCATATAAACATTaGGCAGGTCACTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQKAYKH*AGHCGL
Trigger: TAGGCCACAGTGACCTGCGCAATGTTTATATGCTTT...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGCACTCACAGACCTTCTaGGAGACACTGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLHSQTF*ETLVPF
Trigger: GAAAGGAACCAGTGTCTCCCAGAAGGTCTGTGAGTG...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTAGGTTCGAGGTATCCTaGAGAAGAAGTGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTRFEVS*RRSAEH
Trigger: ATGCTCTGCACTTCTTCTCCAGGATACCTCGAACCT...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCAACCTCCTGAGTAGCTaGGTTTACAGGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVNLLSS*VYRHRP
Trigger: TGGCCTGTGCCTGTAAACCCAGCTACTCAGGAGGTT...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTCAGCTCCCTTCTGGATaGAGTAGTGACATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LEKKCRALQACCEELVGIQLPSG*SSDMAG
Trigger: TCCAGCCATGTCACTACTCCATCCAGAAGGGAGCTG...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCGGGAGGCCGCGCCTaGCAGGTAGGAGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFAGGRA*QVGASP
Trigger: GGGGCTTGCTCCTACCTGCCAGGCGCGGCCTCCCGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444623.6
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGGGCAGCCGCGGCGGTaGGGTTGGCAGGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFGQPRR*GWQGVL
Trigger: CAGCACACCCTGCCAACCCCACCGCCGCGGCTGCCC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444623.6
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCTGGACGGCCCAGCTaGACCTCTCCGTGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFAGRPS*TSPCVP
Trigger: GGGGACGCACGGAGAGGTGCAGCTGGGCCGTCCAGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCAGGGGCGGCAGTGTaGGGAGGCCCCTCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPGAAV*GGPSAC
Trigger: GCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCATTTCATATGTGTACTaGCTGGTGTTGAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLISYVY*LVLRLS
Trigger: TGAGAGCCTCAACACCAGCCAGTACACATATGAAAT...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp AGCCTCGGCCATACCAATCTGCCTCTCCAGATCCTCGGGGACCATTTTCCCTCTCATACATGTTGGAGATaGAGCCACAAACCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLGHTNLPLQILGDHFPSHTCWR*SHKPGQ
Trigger: CTGCCCTGGTTTGTGGCTCCATCTCCAACATGTATG...AGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGTTGGCAGGGTGTGCTaGGGCCTGGAGGAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFVGRVC*GLEEAP
Trigger: CGGCGCCTCCTCCAGGCCCCAGCACACCCTGCCAAC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444623.6
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCGCCGCTCCAGCCCTTaGTCGCCCTGTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFRRSSP*SPCAFH
Trigger: GTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGTGAGCCACCCCAGCTaGACCTCTCCGTGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFVSHPS*TSPCVP
Trigger: GGGGACGCACGGAGAGGTGCAGCTGGGGTGGCTCAC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379846.5
CDS-3UTR CCA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTATTTCATATGTGTACTaGCTGGTGTTGAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTISYVY*LVLRLS
Trigger: TGAGAGCCTCAACACCAGCCAGTACACATATGAAAT...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCAGGTTCGAGGTATCCTaGAGAAGAAGTGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVRFEVS*RRSAEH
Trigger: ATGCTCTGCACTTCTTCTCCAGGATACCTCGAACCT...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCACACGGAAGAAGTTaGCCCGGGTCCCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPHGRS*PGSRGA
Trigger: AGCCCCACGGGACCCGGGGCAACTTCTTCCGTGTGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCACAGGTAGCCAGCTaGACCTCTCCGTGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFAQVAS*TSPCVP
Trigger: GGGGACGCACGGAGAGGTGCAGCTGGCTACCTGTGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379850.7
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGAGCCGGAGGCAGGGTaGACAGGTAGCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFEPEAG*TGSSSA
Trigger: AGCCGAGGAGCTACCTGTGCACCCTGCCTCCGGCTC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444623.6
CDS-3UTR CCA 90 bp CCGGGTAGCGCTGATAGCGGGCCAGATTTACAGCATACATGTTGGAGATGGAGCTGGTTCCTTTCTGAATaGCCTCATCCACAACAACCC +
Preference number: 4 (lower is better)
Translates to: PGSADSGPDLQHTCWRWSWFLSE*PHPQQP
Trigger: GGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCA...GCTCCATCTCCAACATGTATGCTGTAAATCTGGCCCGCTATCAGCGCTACCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR CCA 90 bp GCCTCGGCCATACCAATCTGCCTCTCCAGATCCTCGGGGACCATTTTCCCTCTCATTTCATATGTGTACTaGCTGGTGTTGAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: ASAIPICLSRSSGTIFPLISYVY*LVLRLS
Trigger: TGAGAGCCTCAACACCAGCCAGTACACATATGAAAT...GAGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483632.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCAGGATCTGCTTCTGTaGCTCGCCCTGGCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFQDLLL*LALAPQ
Trigger: CTGCGGAGCCAGGGCGAGTCACAGAAGCAGATCCTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTGCCAGAGGTGGCACTaGCCAGGAACGGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFCQRWH*PGTAQH
Trigger: GTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTCACCATGCGCTCCTTaGGCACGGGGGCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFSPCAP*ARGPPL
Trigger: CAAAGGTGGCCCCCGTGCTCAAGGAGCGCATGGTGA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCTGGGATTACAGGTGTaGGCCACCCTCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFLGLQV*ATLGPG
Trigger: ACCGGGACCGAGGGTGGCTCACACCTGTAATCCCAG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444623.6
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTACACGGCGGCCACACTaGACCACCTTGTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFTRRPH*TTLSPV
Trigger: CACGGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTAAAGCATATAAACATTaGGCAGGTCACTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: LEKKCRALQACCEELVGIKAYKH*AGHCGL
Trigger: TAGGCCACAGTGACCTGCGCAATGTTTATATGCTTT...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCGCCCGGCCAGAGCATaGGGATCCAACCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFRPARA*GSNPEK
Trigger: CTTCTCTGGGTTGGATCCCCATGCTCTGGCCGGGCG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCTGGCCTGGGACCCATaGCAGCGCTTGAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFLAWDP*QRLSRF
Trigger: GAACCTGCTCAAGCGCTGCCATGGGTCCCAGGCCAG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCAAGGACAAAGGCCTaGTCGATGCGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFARTKA*SMRRSS
Trigger: GCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAAGGCTCACAGGTCCTaGCCTAGCCGCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFKAHRS*PSRSSS
Trigger: CGAGCTGGAGCGGCTAGGCCAGGACCTGTGAGCCTT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CCA 90 bp CCGGGTAGCGCTGATAGCGGGCCAGATTTACAGCATACATGTTGGAGATGGAGCCATATGTGTACCTTCTaGGAGACACTGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PGSADSGPDLQHTCWRWSHMCTF*ETLVPF
Trigger: GAAAGGAACCAGTGTCTCCCAGAAGGTACACATATG...GCTCCATCTCCAACATGTATGCTGTAAATCTGGCCCGCTATCAGCGCTACCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGTGGAGGCTAGTGTTTaGTGCTGGACGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFVEASV*CWTAQL
Trigger: CAGCTGGGCCGTCCAGCATCAAACACTAGCCTCCAC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCACCTCCTCTTCCATaGGCACAAACACGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFAPPLP*AQTRGR
Trigger: TCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGACACTCCTTCGATGTaGATAGGGCCAGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFDTPSM*IGPGAA
Trigger: TGCCGCCCCTGGCCCTATTCACATCGAAGGAGTGTC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267085.8
ENST00000379850.7
ENST00000444623.6
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTATGCCTGTGTGTCTGTaGCAGCAGGACGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFMPVCL*QQDAPT
Trigger: GGTGGGAGCGTCCTGCTGTCACAGACACACAGGCAT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGAGCCGGAGGCAGGGTaGACAGGTAGCTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFEPEAG*TGSSAE
Trigger: TTCTGCTGAGCTACCTGTGCACCCTGCCTCCGGCTC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCACCGCTCCAGGATCTaGTTCTGTGACTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFHRSRI*FCDSPW
Trigger: CCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGGAGGCCCCTCTGCTTaGAATCCGGGTAGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFGGPSA*NPGSAD
Trigger: ATCAGCGCTACCCGGATTGCAAGCAGAGGGGCCTCC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAGAGCATTGCAGGCCTaGTGCGAGGAGCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFRALQA*CEELVG
Trigger: CCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCAAAGGCCTGGTCGATaGGCCGCTCCAGCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFQRPGR*AAPALD
Trigger: ATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCTGCGAGGAGCTTGTaGGGATTCCAGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFAARSL*GFQATE
Trigger: CTCTGTGGCCTGGAATCCCCACAAGCTCCTCGCAGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCTTCCCTCGCAGGCTaGGGGGTACGAACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFASLAG*GVRTRN
Trigger: GTTTCTGGTTCGTACCCCCCAGCCTGCGAGGGAAGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGGAGGGGAGTGCTTCTaGGTCAGCCATCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFGGECF*VSHQDL
Trigger: GAGATCCTGATGGCTGACTCAGAAGCACTCCCCTCC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFLSHQP*PLGHCR
Trigger: CCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTACCCATGGCAGCGCTTaGGCAGGTTCGAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFTHGSA*AGSRYP
Trigger: AGGATACCTCGAACCTGCTCAAGCGCTGCCATGGGT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCACGGGGGCCACCTTTaGCAGCCTTTCGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFHGGHL*QPFVVI
Trigger: GATTACCACGAAAGGCTGTCAAAGGTGGCCCCCGTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCCGCTCCAGCTCGTTaGGGAGGAAGTCCATATCAG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFAAPAR*GGSPYQ
Trigger: CTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGGAGGGGAGTGCTTCTaGGTCAGCCATCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFGGECF*VSHQDL
Trigger: CAGATCCTGATGGCTGACTCAGAAGCACTCCCCTCC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379846.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCATCAGGATCTCTCTaGTCAGGAGAGCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPSGSL*SGEPEA
Trigger: TGCCTCCGGCTCTCCTGAGCAGAGAGATCCTGATGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCTCGGACACTGTCGGTaGCAAGTCCCAGAAACGCAG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFLGHCR*QVPETQ
Trigger: CTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTCGGCCATACCAATCTaGCTCTCCAGATCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFSAIPI*LSRSSG
Trigger: CCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAGAAGTGCAGAGCATTaGAGGCCTGCTGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFRSAEH*RPAARS
Trigger: GCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCCTTGATCGCCCTGTaGCTTCCACATGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPLIAL*LPHEPQ
Trigger: CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTTCTGTGACTCGCCCTaGCTCCGCAGCTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFFCDSP*LRSSKS
Trigger: GGATTTGGAGCTGCGGAGCCAGGGCGAGTCACAGAA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCAGAGAAGAGCTGGTTaGAGAACCGAGGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFQRRAG*RTEGDQ
Trigger: CTGGTCACCCTCGGTTCTTCAACCAGCTCTTCTCTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTACAGAGTCAGCCCTCTaGATCCCATCCAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFTESAL*IPSRRC
Trigger: GCATCTCCTGGATGGGATCCAGAGGGCTGACTCTGT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGAGGGTGACCAGTCTTaGCACTGTAGCGAATCACAG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFEGDQS*HCSESQ
Trigger: CTGTGATTCGCTACAGTGTCAAGACTGGTCACCCTC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCAAACTCAGGCTCCATaGCTAGCTCAAACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFQTQAP*LAQTLP
Trigger: GGGAAGGGTTTGAGCTAGTCATGGAGCCTGAGTTTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTATCCCATCCAGGAGATaGCTGTGTGTCTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFIPSRR*LCVCDS
Trigger: GCTGTCACAGACACACAGGCATCTCCTGGATGGGAT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTATCAGCACAGGTCAGTaGAGAGTTGGCCACAACCAC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFISTGQ*RVGHNH
Trigger: GTGGTTGTGGCCAACTCTGCACTGACCTGTGCTGAT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCAGCTCCCTTCTGGATaGAGTAGTGACACTCCTTCG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFQLPSG*SSDTPS
Trigger: CGAAGGAGTGTCACTACTCCATCCAGAAGGGAGCTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267085.8
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCTTTCGTGGTAATCTaGACTCTCCTGCTTCCCTCG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPFVVI*TLLLPS
Trigger: CGAGGGAAGCAGGAGAGTCCAGATTACCACGAAAGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGGTAGCCAATCATCATaGAGCCCTCCTTCACCATGC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFGSQSS*SPPSPC
Trigger: GCATGGTGAAGGAGGGCTCCATGATGATTGGCTACC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAGGTCAGTGCAGAGTTaGCCACAACCACACGGAAGA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFRSVQS*PQPHGR
Trigger: TCTTCCGTGTGGTTGTGGCCAACTCTGCACTGACCT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAGCCATCAGGATCTGTaGCAGAGCAGAGTCATTCCC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFSHQDL*QSRVIP
Trigger: GGGAATGACTCTGCTCTGCCACAGATCCTGATGGCT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379846.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCAGCTCCCTTCTGGATaGAGTAGTGACACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFQLPSG*SSDTSG
Trigger: CCCAGAAGTGTCACTACTCCATCCAGAAGGGAGCTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379846.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCTTCTGGGAGACACTaGTTCCTTTCTGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPSGRH*FLSEWP
Trigger: AGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCACTCACAGACCTTCTaGGAGACACTGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFHSQTF*ETLVPF
Trigger: GAAAGGAACCAGTGTCTCCCAGAAGGTCTGTGAGTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCATACATGTTGGAGATaGAGCCACCAGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFHTCWR*SHQGRR
Trigger: TCTTCTGCCCTGGTGGCTCCATCTCCAACATGTATG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTACACTGGTTCCTTTCTaGATGGCCTCATCCACAACA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFTLVPF*MASSTT
Trigger: TGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGGTCTTTTCCACGTGTaGAGGCTAGTGTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFGLFHV*RLVFDA
Trigger: AGCATCAAACACTAGCCTCCACACGTGGAAAAGACC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTGGTTCCTTTCTGAATaGCCTCATCCACAACAACCC +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFWFLSE*PHPQQP
Trigger: GGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAGGTTCGAGGTATCCTaGAGAAGAAGTGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFRFEVS*RRSAEH
Trigger: ATGCTCTGCACTTCTTCTCCAGGATACCTCGAACCT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTTGCGCAGGTCACTGTaGCCTAAAAAGGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFLRRSL*PKKAVL
Trigger: AAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTACTTCTGGGAGACACTaGTTCCTTTCTGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFTSGRH*FLSEWP
Trigger: AGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379846.5
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTCCATCAAGCGCATTTaGAGTCCATCTTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFSIKRI*SPSLAG
Trigger: TCCTGCTAAAGATGGACTGCAAATGCGCTTGATGGA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAAGACTAGTCTACTGTaGGAGTCAGGGTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFKTSLL*ESGSFP
Trigger: TGGAAAAGACCCTGACTCCCACAGTAGACTAGTCTT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS-3UTR TCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCTAGGCAGAAGAATTTaGAGACAGTCTGGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFLGRRI*RQSGFH
Trigger: ATGGAAACCAGACTGTCTTCAAATTCTTCTGCCTAG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS-3UTR GCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAAAGCATATAAACATTaGGCAGGTCACTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFKAYKH*AGHCGL
Trigger: TAGGCCACAGTGACCTGCGCAATGTTTATATGCTTT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CCA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTATTTCATATGTGTACTaGCTGGTGTTGAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFISYVY*LVLRLS
Trigger: TGAGAGCCTCAACACCAGCCAGTACACATATGAAAT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CAA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGCCACACTGCACCACCTaGTCTCCCGTGTCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQPHCTT*SPVSRA
Trigger: GGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGG...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp GGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCG +
Preference number: 5 (lower is better)
Translates to: GQGQRPGRCAAPALDRPVPLSSA*TTRTLS
Trigger: CGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGG...CACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCCCTGCTGCGAGGAGCTaGTGGGGATTCCAGGCCACA +
Preference number: 5 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLPAARS*WGFQAT
Trigger: TGTGGCCTGGAATCCCCACAAGCTCCTCGCAGCAGG...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp GTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCACATGAGCCACAGCAGAGTCTCGTACTGTaGCCCAGCCTGGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VDAPLQPLIALCLPHEPQQSLVL*PSLECR
Trigger: CCTGCACTCCAGGCTGGGCAACAGTACGAGACTCTG...CTGTGGCTCATGTGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS TCA 90 bp AGGACGCTCCCACCCCAGGCAGCATCCACATGCAGCCATAGCCCATaGCGCTGGCACACATCAGCAATTGCCTCCAGGGGGTCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: RTLPPQAASTCSHSP*RWHTSAIASRGSKA
Trigger: GGCCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCATGTGGATGCTGCCTGGGGTGGGAGCGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000453446.6
ENST00000490589.5
ENST00000490923.5
ENST00000548698.5
CDS CCA 90 bp ATCACAGCCCGACACCGCTCCAGGATCTGCTTCTGTGACTCGCCCTaGCTCCGCAGCTCCAAATCCAGCAGCTGCTTCAGCTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ITARHRSRICFCDSP*LRSSKSSSCFSSSG
Trigger: GCCTGAGGAGCTGAAGCAGCTGCTGGATTTGGAGCTGCGGAGCCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTGTCGGGCTGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000424990.5
ENST00000437073.5
ENST00000444623.6
ENST00000453446.6
ENST00000475890.5
ENST00000483632.5
ENST00000491654.1
ENST00000498635.1
CDS-3UTR CAA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCGACCCATGGCAGCGCTaGAGCAGGTTCGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLDPWQR*SRFEVS
Trigger: GGATACCTCGAACCTGCTCAAGCGCTGCCATGGGTC...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCGCGCCGCTCCAGCCCTaGATCGCCCTGTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVAPLQP*IALCLP
Trigger: TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGC...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp CATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGGTCGATGCGCCGCTCAAGAAGTGCAGAGCATaGCAGGCCTGCTGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: HFLHQVPGKDKGLVDAPLKKCRA*QACCEE
Trigger: CTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTT...GAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCATCAGGAGCCCAGGGTaGGGCCTGTGCCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVIRSPG*GLCLFP
Trigger: GGGGAAGAGGCACAGGCCCAACCCTGGGCTCCTGAT...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTATCAGGAGCCCAGGGTaGGGCCTGTGCCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LEKKCRALQACCEELVGIIRSPG*GLCLFP
Trigger: GGGGAAGAGGCACAGGCCCAACCCTGGGCTCCTGAT...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp GGCCCGCAGTTTCCTCAGCACCTCCTCTTCCATGAGCACAAACACGGGGGCGATCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCG +
Preference number: 5 (lower is better)
Translates to: GPQFPQHLLFHEHKHGGDPLSSA*TTRTLS
Trigger: CGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGG...ATCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGCTGAGGAAACTGCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR CAA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTCCACACTGCACCACCTaGTCTCCCGTGTCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LEKKCRALQACCEELVGIPHCTT*SPVSRA
Trigger: GGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGG...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS CCA 90 bp GGTGGTATCAAGGCCGGCAGCAAGACAGAGAAGGCTCACAGGTCCTaGCCTAGCCGCTCCAGCTCGTTGAGGAGGAAGTCCATATCAGCA +
Preference number: 5 (lower is better)
Translates to: GGIKAGSKTEKAHRS*PSRSSSLRRKSISA
Trigger: TGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGGACCTGTGAGCCTTCTCTGTCTTGCTGCCGGCCTTGATACCACC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CAA 90 bp GACAAAGGCCTGGTCGATGCGCCGCTCCAGCCCTTGATCGCCCTGTGCCTTCCAGTGTACTGGCTGGTGTaGAGGCTCTCAGTGATAATG +
Preference number: 5 (lower is better)
Translates to: DKGLVDAPLQPLIALCLPVYWLV*RLSVIM
Trigger: CATTATCACTGAGAGCCTCAACACCAGCCAGTACAC...TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp GCCTCGGCCATACCAATCTGCCTCTCCAGATCCTCGGGGACCATTTTCCCTCTCCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCG +
Preference number: 5 (lower is better)
Translates to: ASAIPICLSRSSGTIFPLPLSSA*TTRTLS
Trigger: CGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGG...GAGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424845.5
ENST00000483632.5
CDS-3UTR CAA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCGACCCATGGCAGCGCTaGAGCAGGTTCGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVDPWQR*SRFEVS
Trigger: GGATACCTCGAACCTGCTCAAGCGCTGCCATGGGTC...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS TCA 90 bp AGACAGAGAAGGCTCACAGGTCCTGGCCTAGCCGCTCCAGCTCGTTaGGGAGGAAGTCCATATCAGCACAGGTCAGTGCAGAGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: RQRRLTGPGLAAPAR*GGSPYQHRSVQSWP
Trigger: TGGCCAACTCTGCACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGGACCTGTGAGCCTTCTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS CCA 90 bp CCCATAAGACTAGTCTACTGTGGGAGTCAGGGTCTTTTCCACGTGTaGAGGCTAGTGTTTGATGCTGGACGGCCCGCTCTGAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PIRLVYCGSQGLFHV*RLVFDAGRPALRLP
Trigger: GGGCAGCCTCAGAGCGGGCCGTCCAGCATCAAACACTAGCCTCCACACGTGGAAAAGACCCTGACTCCCACAGTAGACTAGTCTTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453446.6
CDS CCA 90 bp GGACACTGTCGGTGCCAAGTCCCAGAAACGCAGCTCCCTTCTGGATaGAGTAGTGACACTGTGGGGGAAGGCAGAGGGCAAGTTAGCACA +
Preference number: 5 (lower is better)
Translates to: GHCRCQVPETQLPSG*SSDTVGEGRGQVST
Trigger: TGTGCTAACTTGCCCTCTGCCTTCCCCCACAGTGTCACTACTCCATCCAGAAGGGAGCTGCGTTTCTGGGACTTGGCACCGACAGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472908.1
ENST00000485004.5
ENST00000490923.5
CDS-3UTR CAA 90 bp AGCCACAGCTTCAGACAGTCCACACGGCGGCCACACTGCACCACCTTGTCTCCCGTGTACTGGCTGGTGTaGAGGCTCTCAGTGATAATG +
Preference number: 5 (lower is better)
Translates to: SHSFRQSTRRPHCTTLSPVYWLV*RLSVIM
Trigger: CATTATCACTGAGAGCCTCAACACCAGCCAGTACAC...GGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCG +
Preference number: 5 (lower is better)
Translates to: LEKKCRALQACCEELVGIPLSSA*TTRTLS
Trigger: CGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGG...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp CTGGAGAAGAAGTGCAGAGCATTGCAGGCCTGCTGCGAGGAGCTTGTGGGGATTAAGAAGTGCAGAGCATaGCAGGCCTGCTGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: LEKKCRALQACCEELVGIKKCRA*QACCEE
Trigger: CTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTT...AATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS TCA 90 bp TGGGAGACGCTGGCAGGCTCTGGTAGACAGGAACAGCAATTCTACTaGATAGCGAGGGGAGAGAGGTCCACCAGCGGTAAGGGTCTGATG +
Preference number: 5 (lower is better)
Translates to: WETLAGSGRQEQQFY*IARGERSTSGKGLM
Trigger: CATCAGACCCTTACCGCTGGTGGACCTCTCTCCCCTCGCTATTCAGTAGAATTGCTGTTCCTGTCTACCAGAGCCTGCCAGCGTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490589.5
CDS CCA 90 bp CCCATAAGACTAGTCTACTGTGGGAGTCAGGGTCTTTTCCACGTGTaGAGGCTAGTGTTTGATGCTGGACGGCCCAGCTGCACCTCTCCG +
Preference number: 5 (lower is better)
Translates to: PIRLVYCGSQGLFHV*RLVFDAGRPSCTSP
Trigger: CGGAGAGGTGCAGCTGGGCCGTCCAGCATCAAACACTAGCCTCCACACGTGGAAAAGACCCTGACTCCCACAGTAGACTAGTCTTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS CCA 90 bp AAGTCCCAGAAACGCAGCTCCCTTCTGGATGGAGTAGTGACACTGTaGGGGAAGGCAGAGGGCAAGTTAGCACAACTTGATGGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: KSQKRSSLLDGVVTL*GKAEGKLAQLDGGG
Trigger: CCCTCCCCCATCAAGTTGTGCTAACTTGCCCTCTGCCTTCCCCCACAGTGTCACTACTCCATCCAGAAGGGAGCTGCGTTTCTGGGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000472908.1
ENST00000485004.5
ENST00000490923.5
CDS-3UTR CAA 90 bp CCCTTCCCGCTTCTTCATTTCCTCCACCAGGTACCGGGCAAGGACAAAGGCCTGAGGCGTGAGCCACCTTaGACAGCCTTTCGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: PFPLLHFLHQVPGKDKGLRREPP*TAFRGN
Trigger: ATTACCACGAAAGGCTGTCAAAGGTGGCTCACGCCT...CAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379843.7
CDS CCA 90 bp CCTTCCACTCACAGACCTTCTGGGAGACACTGGTTCCTTTCTGAATaGCCTCATCCACAACAACCCCAAACACGGCCCGGAGCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: PSTHRPSGRHWFLSE*PHPQQPQTRPGARL
Trigger: AAGCCTTGCTCCGGGCCGTGTTTGGGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGGTCTGTGAGTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000424990.5
ENST00000437073.5
ENST00000444623.6
ENST00000453446.6
ENST00000475890.5
ENST00000491654.1
ENST00000498635.1
CDS CCA 90 bp GGATGGAGTAGTGACACTTCTGGGAGACACTGGTTCCTTTCTGAATaGCCTCATCCACAACAACCCCAAACACGGCCCGGAGCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: GWSSDTSGRHWFLSE*PHPQQPQTRPGARL
Trigger: AAGCCTTGCTCCGGGCCGTGTTTGGGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGTGTCACTACTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379846.5
ENST00000548698.5
CDS CCA 90 bp AGGCAGGGTGCACAGGTAGCTCTTTCAATGGCCCAAATCATGGAGTaGCTCAGGGAAATGAAATCTGTCCAGCTGCACCTCTCCGTGCGT +
Preference number: 5 (lower is better)
Translates to: RQGAQVALSMAQIME*LREMKSVQLHLSVR
Trigger: ACGCACGGAGAGGTGCAGCTGGACAGATTTCATTTCCCTGAGCCACTCCATGATTTGGGCCATTGAAAGAGCTACCTGTGCACCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424990.5
CDS CCA 90 bp GGAAGAAAGGACTCACCTTCTGGGAGACACTGGTTCCTTTCTGAATaGCCTCATCCACAACAACCCCAAACACGGCCCGGAGCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: GRKDSPSGRHWFLSE*PHPQQPQTRPGARL
Trigger: AAGCCTTGCTCCGGGCCGTGTTTGGGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGGTGAGTCCTTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461392.1
CDS-3UTR CAA 90 bp GGCGGCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTAACCAGAAACACACATaGACAAACTCAGGCTCCATG +
Preference number: 5 (lower is better)
Translates to: GGHTAPPCLPCPEPHRRTNQKHT*TNSGSM
Trigger: CATGGAGCCTGAGTTTGTCAATGTGTGTTTCTGGTT...AGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTACCACACGGAAGAAGTaGCCCCGGGTCCCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFTTRKK*PRVPWG
Trigger: GCCCCACGGGACCCGGGGCAACTTCTTCCGTGTGGT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CAA 90 bp GCCACACTGCACCACCTTGTCTCCCGTGTCCAGAGCCACATCGTAGAACTTGTCAACCAGAAACACACATaGACAAACTCAGGCTCCATG +
Preference number: 5 (lower is better)
Translates to: ATLHHLVSRVQSHIVELVNQKHT*TNSGSM
Trigger: CATGGAGCCTGAGTTTGTCAATGTGTGTTTCTGGTT...GACAAGTTCTACGATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379843.7
ENST00000475890.5
CDS CCA 90 bp GATTTCATATGTGTACCTTCTGGGAGACACTGGTTCCTTTCTGAATaGCCTCATCCACAACAACCCCAAACACGGCCCGGAGCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: DFICVPSGRHWFLSE*PHPQQPQTRPGARL
Trigger: AAGCCTTGCTCCGGGCCGTGTTTGGGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGGTACACATATGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424845.5
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCTGCTGCGAGGAGCTaGTGGGGATTCCAGGCCACA +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPAARS*WGFQAT
Trigger: TGTGGCCTGGAATCCCCACAAGCTCCTCGCAGCAGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGACCCATGGCAGCGCTaGAGCAGGTTCGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFDPWQR*SRFEVS
Trigger: GGATACCTCGAACCTGCTCAAGCGCTGCCATGGGTC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTTCACCATGCGCTCCTaGAGCACGGGGGCCACCTTT +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFFTMRS*STGATF
Trigger: AAAGGTGGCCCCCGTGCTCAAGGAGCGCATGGTGAA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCG +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFPLSSA*TTRTLS
Trigger: CGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGGCACACATCAGCAATaGCCTCCAGGGGGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFGTHQQ*PPGGQR
Trigger: CCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAAGAAGTGCAGAGCATaGCAGGCCTGCTGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFKKCRA*QACCEE
Trigger: CTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCACGGGGGCCACCTTaGACAGCCTTTCGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFARGPP*TAFRGN
Trigger: ATTACCACGAAAGGCTGTCAAAGGTGGCCCCCGTGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTCAGGTCAGTGCAGAGTaGGCCACAACCACACGGAAG +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFQVSAE*ATTTRK
Trigger: CTTCCGTGTGGTTGTGGCCAACTCTGCACTGACCTG...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAGCCGCTCCAGCTCGTaGAGGAGGAAGTCCATATCA +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFSRSSS*RRKSIS
Trigger: TGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGTGTACTGGCTGGTGTaGAGGCTCTCAGTGATAATG +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFVYWLV*RLSVIM
Trigger: CATTATCACTGAGAGCCTCAACACCAGCCAGTACAC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTTTCCATCAAGCGCATTaGCAGTCCATCTTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFFHQAH*QSIFSR
Trigger: CCTGCTAAAGATGGACTGCAAATGCGCTTGATGGAA...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTGCTAGGCAGAAGAATTaGAAGACAGTCTGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFARQKN*KTVWFP
Trigger: TGGAAACCAGACTGTCTTCAAATTCTTCTGCCTAGC...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS-3UTR CAA 90 bp GTCAAAGCATATAAACATTGCGCAGGTCACTGTGGCCTAAAAAGGCTGTTCTTTAACCAGAAACACACATaGACAAACTCAGGCTCCATG +
Preference number: 5 (lower is better)
Translates to: VKAYKHCAGHCGLKRLFFNQKHT*TNSGSM
Trigger: CATGGAGCCTGAGTTTGTCAATGTGTGTTTCTGGTT...AAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000475890.5
CDS TCA 72 bp CCACCCCAGGCAGCATCCACATGCAGCCATAGCCCATaGCGCTGGCACACATCAGCAATTGCCTCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: PPQAASTCSHSP*RWHTSAIASRG
Trigger: CCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCATGTGGATGCTGCCTGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000453446.6
ENST00000490589.5
ENST00000490923.5
ENST00000548698.5
CDS GCA 72 bp GCCACAGAGTCAGCCCTCTGGATCCCATCCAGGAGATaGCTGTGTGTCTGTGACAGCAGGACGCTCCCACCC +
Preference number: 6 (lower is better)
Translates to: ATESALWIPSRR*LCVCDSRTLPP
Trigger: GGGTGGGAGCGTCCTGCTGTCACAGACACACAGGCATCTCCTGGATGGGATCCAGAGGGCTGACTCTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000453446.6
ENST00000490589.5
ENST00000490923.5
CDS CCA 72 bp CGACACCGCTCCAGGATCTGCTTCTGTGACTCGCCCTaGCTCCGCAGCTCCAAATCCAGCAGCTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RHRSRICFCDSP*LRSSKSSSCFS
Trigger: GCTGAAGCAGCTGCTGGATTTGGAGCTGCGGAGCCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000424990.5
ENST00000437073.5
ENST00000444623.6
ENST00000453446.6
ENST00000475890.5
ENST00000483632.5
ENST00000491654.1
ENST00000498635.1
CDS CCA 72 bp AAGGCCGGCAGCAAGACAGAGAAGGCTCACAGGTCCTaGCCTAGCCGCTCCAGCTCGTTGAGGAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: KAGSKTEKAHRS*PSRSSSLRRKS
Trigger: GGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGGACCTGTGAGCCTTCTCTGTCTTGCTGCCGGCCTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS CAA 72 bp GCAGCCATAGCCCATGACGCTGGCACACATCAGCAATaGCCTCCAGGGGGTCAAAGGCCCCTAGCACAGTGG +
Preference number: 6 (lower is better)
Translates to: AAIAHDAGTHQQ*PPGGQRPLAQW
Trigger: CCACTGTGCTAGGGGCCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000453446.6
ENST00000475890.5
ENST00000485004.5
ENST00000490589.5
ENST00000490923.5
ENST00000548698.5
CDS CAA 90 bp CATCCACATGCAGCCATAGCCCATGACGCTGGCACACATCAGCAATaGCCTCCAGGGGGTCAAAGGCCCCTAGCACAGTGGTGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: HPHAAIAHDAGTHQQ*PPGGQRPLAQWCQR
Trigger: CCTCTGGCACCACTGTGCTAGGGGCCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCATGTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000453446.6
ENST00000475890.5
ENST00000485004.5
ENST00000490589.5
ENST00000490923.5
ENST00000548698.5
CDS CAA 90 bp AGCTCGTTGAGGAGGAAGTCCATATCAGCACAGGTCAGTGCAGAGTaGGCCACAACCACACGGAAGAAGTTGCCCCGGGTCCCGTGGGGC +
Preference number: 6 (lower is better)
Translates to: SSLRRKSISAQVSAE*ATTTRKKLPRVPWG
Trigger: GCCCCACGGGACCCGGGGCAACTTCTTCCGTGTGGTTGTGGCCAACTCTGCACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000453446.6
CDS TCA 72 bp AGGCTCACAGGTCCTGGCCTAGCCGCTCCAGCTCGTTaGGGAGGAAGTCCATATCAGCACAGGTCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: RLTGPGLAAPAR*GGSPYQHRSVQ
Trigger: CTGCACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGGACCTGTGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS CCA 72 bp CGGTGCCAAGTCCCAGAAACGCAGCTCCCTTCTGGATaGAGTAGTGACACTGTGGGGGAAGGCAGAGGGCAA +
Preference number: 6 (lower is better)
Translates to: RCQVPETQLPSG*SSDTVGEGRGQ
Trigger: TTGCCCTCTGCCTTCCCCCACAGTGTCACTACTCCATCCAGAAGGGAGCTGCGTTTCTGGGACTTGGCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000472908.1
ENST00000485004.5
ENST00000490923.5
CDS CAA 72 bp CCAATCATCATGGAGCCCTCCTTCACCATGCGCTCCTaGAGCACGGGGGCCACCTTTGACAGCCTTTCGTGG +
Preference number: 6 (lower is better)
Translates to: PIIMEPSFTMRS*STGATFDSLSW
Trigger: CCACGAAAGGCTGTCAAAGGTGGCCCCCGTGCTCAAGGAGCGCATGGTGAAGGAGGGCTCCATGATGATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000453446.6
CDS CAA 90 bp AAGACAGAGAAGGCTCACAGGTCCTGGCCTAGCCGCTCCAGCTCGTaGAGGAGGAAGTCCATATCAGCACAGGTCAGTGCAGAGTTGGCC +
Preference number: 6 (lower is better)
Translates to: KTEKAHRSWPSRSSS*RRKSISAQVSAELA
Trigger: GGCCAACTCTGCACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGGACCTGTGAGCCTTCTCTGTCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS TCA 72 bp CAATCATCATGGAGCCCTCCTTCACCATGCGCTCCTTaGGCACGGGGGCCACCTTTGACAGCCTTTCGTGGT +
Preference number: 6 (lower is better)
Translates to: QSSWSPPSPCAP*ARGPPLTAFRG
Trigger: ACCACGAAAGGCTGTCAAAGGTGGCCCCCGTGCTCAAGGAGCGCATGGTGAAGGAGGGCTCCATGATGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000453446.6
CDS CCA 72 bp GGAGGAAGTCCATATCAGCACAGGTCAGTGCAGAGTTaGCCACAACCACACGGAAGAAGTTGCCCCGGGTCC +
Preference number: 6 (lower is better)
Translates to: GGSPYQHRSVQS*PQPHGRSCPGS
Trigger: GGACCCGGGGCAACTTCTTCCGTGTGGTTGTGGCCAACTCTGCACTGACCTGTGCTGATATGGACTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
ENST00000453446.6
CDS CAA 72 bp AAGGCTCACAGGTCCTGGCCTAGCCGCTCCAGCTCGTaGAGGAGGAAGTCCATATCAGCACAGGTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: KAHRSWPSRSSS*RRKSISAQVSA
Trigger: TGCACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGGACCTGTGAGCCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267085.8
ENST00000379846.5
ENST00000379850.7
ENST00000444623.6
CDS GCA 72 bp TCAGGATCTCTCTGCTCAGGAGAGCCGGAGGCAGGGTaGACAGGTAGCTCAGCAGAAATGAGGACTTCAGTG +
Preference number: 6 (lower is better)
Translates to: SGSLCSGEPEAG*TGSSAEMRTSV
Trigger: CACTGAAGTCCTCATTTCTGCTGAGCTACCTGTGCACCCTGCCTCCGGCTCTCCTGAGCAGAGAGATCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS GCA 72 bp GAGCGAAACTCCATCTCAGCCTCGGCCATACCAATCTaGCTCTCCAGATCCTCGGGGACCATTTTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: ERNSISASAIPI*LSRSSGTIFPL
Trigger: GAGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGCTGAGATGGAGTTTCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472908.1
CDS CCA 72 bp CTAGTCTACTGTGGGAGTCAGGGTCTTTTCCACGTGTaGAGGCTAGTGTTTGATGCTGGACGGCCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LVYCGSQGLFHV*RLVFDAGRPSC
Trigger: GCAGCTGGGCCGTCCAGCATCAAACACTAGCCTCCACACGTGGAAAAGACCCTGACTCCCACAGTAGACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS CCA 72 bp CTAGTCTACTGTGGGAGTCAGGGTCTTTTCCACGTGTaGAGGCTAGTGTTTGATGCTGGACGGCCCGCTCTG +
Preference number: 6 (lower is better)
Translates to: LVYCGSQGLFHV*RLVFDAGRPAL
Trigger: CAGAGCGGGCCGTCCAGCATCAAACACTAGCCTCCACACGTGGAAAAGACCCTGACTCCCACAGTAGACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453446.6
CDS GCA 72 bp TCAGGATCTCTCTGCTCAGGAGAGCCGGAGGCAGGGTaGACAGGTAGCTCTTTCAATGGCCCAAATCATGGA +
Preference number: 6 (lower is better)
Translates to: SGSLCSGEPEAG*TGSSFNGPNHG
Trigger: TCCATGATTTGGGCCATTGAAAGAGCTACCTGTGCACCCTGCCTCCGGCTCTCCTGAGCAGAGAGATCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424990.5
CDS CCA 72 bp CGGTGCCAAGTCCCAGAAACGCAGCTCCCTTCTGGATaGAGTAGTGACACTTCTGGGAGACACTGGTTCCTT +
Preference number: 6 (lower is better)
Translates to: RCQVPETQLPSG*SSDTSGRHWFL
Trigger: AAGGAACCAGTGTCTCCCAGAAGTGTCACTACTCCATCCAGAAGGGAGCTGCGTTTCTGGGACTTGGCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379846.5
ENST00000548698.5
CDS CCA 72 bp CAGGCTCCTTCCACTCACAGACCTTCTGGGAGACACTaGTTCCTTTCTGAATGGCCTCATCCACAACAACCC +
Preference number: 6 (lower is better)
Translates to: QAPSTHRPSGRH*FLSEWPHPQQP
Trigger: GGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGGTCTGTGAGTGGAAGGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000267085.8
ENST00000379843.7
ENST00000379850.7
ENST00000424990.5
ENST00000437073.5
ENST00000444623.6
ENST00000453446.6
ENST00000475890.5
ENST00000491654.1
ENST00000498635.1
CDS CCA 72 bp GGAGGAGGAAGAAAGGACTCACCTTCTGGGAGACACTaGTTCCTTTCTGAATGGCCTCATCCACAACAACCC +
Preference number: 6 (lower is better)
Translates to: GGGRKDSPSGRH*FLSEWPHPQQP
Trigger: GGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGGTGAGTCCTTTCTTCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461392.1
CDS CCA 72 bp AAACGCAGCTCCCTTCTGGATGGAGTAGTGACACTGTaGGGGAAGGCAGAGGGCAAGTTAGCACAACTTGAT +
Preference number: 6 (lower is better)
Translates to: KRSSLLDGVVTL*GKAEGKLAQLD
Trigger: ATCAAGTTGTGCTAACTTGCCCTCTGCCTTCCCCCACAGTGTCACTACTCCATCCAGAAGGGAGCTGCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472908.1
ENST00000485004.5
ENST00000490923.5
CDS TCA 72 bp AGCGTGCATACGAATCGCCTGGGTGTCTGGTTAAAATaGAATGCAGGTTCTGGTCCACTAGGTCTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: SVHTNRLGVWLK*NAGSGPLGLGS
Trigger: AGACCCCAGACCTAGTGGACCAGAACCTGCATTTCATTTTAACCAGACACCCAGGCGATTCGTATGCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485004.5
ENST00000490923.5
CDS CCA 72 bp CCTTCTGGATGGAGTAGTGACACTTCTGGGAGACACTaGTTCCTTTCTGAATGGCCTCATCCACAACAACCC +
Preference number: 6 (lower is better)
Translates to: PSGWSSDTSGRH*FLSEWPHPQQP
Trigger: GGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGTGTCACTACTCCATCCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379846.5
ENST00000548698.5
CDS CCA 72 bp GCACAGGTAGCTCTTTCAATGGCCCAAATCATGGAGTaGCTCAGGGAAATGAAATCTGTCCAGCTGCACCTC +
Preference number: 6 (lower is better)
Translates to: AQVALSMAQIME*LREMKSVQLHL
Trigger: GAGGTGCAGCTGGACAGATTTCATTTCCCTGAGCCACTCCATGATTTGGGCCATTGAAAGAGCTACCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424990.5
CDS CAA 90 bp GCAGGGTGCACAGGTAGCTCAGCAGAAATGAGGACTTCAGTGGAATaGACATCTCCTTCCATCAAGCGCATTTGCAGTCCATCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: AGCTGSSAEMRTSVE*TSPSIKRICSPSLA
Trigger: TGCTAAAGATGGACTGCAAATGCGCTTGATGGAAGGAGATGTCAATTCCACTGAAGTCCTCATTTCTGCTGAGCTACCTGTGCACCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267085.8
CDS CAA 90 bp AGTCAGCCATCAGGATCTACAGCAGAAATGAGGACTTCAGTGGAATaGACATCTCCTTCCATCAAGCGCATTTGCAGTCCATCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: SQPSGSTAEMRTSVE*TSPSIKRICSPSLA
Trigger: TGCTAAAGATGGACTGCAAATGCGCTTGATGGAAGGAGATGTCAATTCCACTGAAGTCCTCATTTCTGCTGTAGATCCTGATGGCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453446.6