RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRYL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165475

Ensembl transcript IDs: ENST00000298248.12, ENST00000382812.5, ENST00000480748.2, ENST00000643035.1, ENST00000643750.1, ENST00000643887.1, ENST00000644153.1, ENST00000644167.1, ENST00000644593.1, ENST00000644872.1, ENST00000645525.1, ENST00000646414.1

Found 692 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCCCTCCCTGCTGCCGGGAGGCGAACGGGCTGGTGCCGGCCTGTaGTTAGCAAGTCAAGTCAGAAGCCAGGGCCGGGATCCTGGAAGA +
Preference number: 1 (lower is better)
Translates to: LPSLLPGGERAGAGL*LASQVRSQGRDPGR
Trigger: TCTTCCAGGATCCCGGCCCTGGCTTCTGACTTGACTTGCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAGGGAGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR GCA 90 bp CCTCACATTCCTCCCCTCCCTGCTGCCGGGAGGCGAACGGGCTGGTaGCGGCCTGTGCTTAGCAAGTCAAGTCAGAAGCCAGGGCCGGGA +
Preference number: 1 (lower is better)
Translates to: PHIPPLPAAGRRTGW*RPVLSKSSQKPGPG
Trigger: TCCCGGCCCTGGCTTCTGACTTGACTTGCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAGGGAGGGGAGGAATGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR TCA 90 bp AGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTC +
Preference number: 1 (lower is better)
Translates to: SPENASAAVPPGPGL*SKVTGRLPACTTPL
Trigger: GAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR TCA 90 bp ACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACA +
Preference number: 1 (lower is better)
Translates to: TQVLLCRQAQGYDPK*RADYRPAPPHSGCT
Trigger: TGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR GCA 90 bp TCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAG +
Preference number: 1 (lower is better)
Translates to: SAQVAGNRQPRERKC*CAARPRAMIQSDGQ
Trigger: CTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR GCA 90 bp TTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGG +
Preference number: 1 (lower is better)
Translates to: LSAQVAGNRQPRERK*CCAARPRAMIQSDG
Trigger: CCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR CCA 90 bp TTTGGGGGTCCAAGATCCAGTCTCTTTGGTGGAACGGGGGTGGAGTaGCCAGTGGAGCAAACTCGAGTGCCCGTACTGGGTGTAGGCCGG +
Preference number: 1 (lower is better)
Translates to: FGGPRSSLFGGTGVE*PVEQTRVPVLGVGR
Trigger: CCGGCCTACACCCAGTACGGGCACTCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTGGACCCCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR CCA 90 bp GCAGGCGGTTCAGAACGAAGCCGGCCACCTCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCA +
Preference number: 1 (lower is better)
Translates to: AGGSERSRPPPSGLA*GTVQSSSSGRGFCP
Trigger: TGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGGCTTCGTTCTGAACCGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR GCA 90 bp CTCAATCTCTCCACTAGCCGCCAGGCCTCGCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAGCCGGCCACCTCCTTCTGGACTCGC +
Preference number: 1 (lower is better)
Translates to: LNLSTSRQASLMIAY*RRFRTKPATSFWTR
Trigger: GCGAGTCCAGAAGGAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCCTGGCGGCTAGTGGAGAGATTGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644153.1
3UTR GCA 90 bp ATTCCTTCCTCCACTAGCCGCCAGGCCTCGCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAGCCGGCCACCTCCTTCTGGACTCGC +
Preference number: 1 (lower is better)
Translates to: IPSSTSRQASLMIAY*RRFRTKPATSFWTR
Trigger: GCGAGTCCAGAAGGAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCCTGGCGGCTAGTGGAGGAAGGAAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR GCA 90 bp AGTCTCATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTaGTCCGGGTCATCAGGGACCTTCATGCACATGTCCTGGTTAACC +
Preference number: 1 (lower is better)
Translates to: SLMRHSSLHCLLAAK*SGSSGTFMHMSWLT
Trigger: GGTTAACCAGGACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCATGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR CCA 90 bp CCAGGGAGCACGCCTCCGGCAGGGGAAGTAAGTGTCAGTAGATTGTaGCCAGACATGTCCATCTGGCATTTCCAAGACCACAGGGCTGCT +
Preference number: 1 (lower is better)
Translates to: PGSTPPAGEVSVSRL*PDMSIWHFQDHRAA
Trigger: AGCAGCCCTGTGGTCTTGGAAATGCCAGATGGACATGTCTGGCCACAATCTACTGACACTTACTTCCCCTGCCGGAGGCGTGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR CCA 90 bp CCTTCAGCCCTACGAGGGCGACATGAAGAAAGCACTGGGCTTGTGTaGATCACCCCAGGGCAGCGGCCAAGAAGAAAGGATTACACCAGC +
Preference number: 1 (lower is better)
Translates to: PSALRGRHEESTGLV*ITPGQRPRRKDYTS
Trigger: GCTGGTGTAATCCTTTCTTCTTGGCCGCTGCCCTGGGGTGATCCACACAAGCCCAGTGCTTTCTTCATGTCGCCCTCGTAGGGCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644153.1
3UTR CCA 90 bp CATCGGGATGTTAGGATTTGGGGGTCCAAGATCCAGTCTCTTTGGTaGAACGGGGGTGGAGTGGCCAGTGGAGCAAACTCGAGTGCCCGT +
Preference number: 1 (lower is better)
Translates to: HRDVRIWGSKIQSLW*NGGGVASGANSSAR
Trigger: ACGGGCACTCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTGGACCCCCAAATCCTAACATCCCGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR CCA 90 bp TGCCATCGGGATGTTAGGATTTGGGGGTCCAAGATCCAGTCTCTTTaGTGGAACGGGGGTGGAGTGGCCAGTGGAGCAAACTCGAGTGCC +
Preference number: 1 (lower is better)
Translates to: CHRDVRIWGSKIQSL*WNGGGVASGANSSA
Trigger: GGCACTCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTGGACCCCCAAATCCTAACATCCCGATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR TCA 90 bp AAATTCACTGGGGCTGCACTTGACTCTTCAACTTGGCGAGTCTCATaGGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCG +
Preference number: 1 (lower is better)
Translates to: KFTGAALDSSTWRVS*GTRPSTASWQLSAP
Trigger: CGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR GCA 90 bp TTCCGAAGCTCATCACCACCAACTCACACCAGCAGGCTGAGAACCTaGCGAGGGTTGCAGATTCATTCCCAGGCACCTCCACATACCCTG +
Preference number: 1 (lower is better)
Translates to: FRSSSPPTHTSRLRT*RGLQIHSQAPPHTL
Trigger: CAGGGTATGTGGAGGTGCCTGGGAATGAATCTGCAACCCTCGGCAGGTTCTCAGCCTGCTGGTGTGAGTTGGTGGTGATGAGCTTCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR CCA 90 bp ATTGCATATTGCAGGCGGTTCAGAACGAAGCCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGG +
Preference number: 1 (lower is better)
Translates to: IAYCRRFRTKPATSF*TRMGHCPIFFIRAW
Trigger: CCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR CCA 90 bp GAGGAGGAGGCGTTTCTAGTCCTGGGCGCCATGGAGGACATAGGCTaGGCTACTGCTGCGACCCTGACTCATTTCCCACATCTTTCAAAC +
Preference number: 1 (lower is better)
Translates to: EEEAFLVLGAMEDIG*ATAATLTHFPHLSN
Trigger: GTTTGAAAGATGTGGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCATGGCGCCCAGGACTAGAAACGCCTCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR TCA 90 bp AATCTCTGCGGCCCAGGCCCTAAGGACAGCAGTCCAGCACAGGGATaGCATCATTCCGAAGGACAGGCAGAACCCAAGGTCAGCAATTTC +
Preference number: 1 (lower is better)
Translates to: NLCGPGPKDSSPAQG*HHSEGQAEPKVSNF
Trigger: GAAATTGCTGACCTTGGGTTCTGCCTGTCCTTCGGAATGATGTCATCCCTGTGCTGGACTGCTGTCCTTAGGGCCTGGGCCGCAGAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR GCA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGGCTGATTAAGGGCTTGCAGTGTTCC +
Preference number: 1 (lower is better)
Translates to: HSGCTQDSQLRISVG*YLCHRGLIKGLQCS
Trigger: GGAACACTGCAAGCCCTTAATCAGCCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR GCA 90 bp GGCGTTTCTAGTCCTGGGCGCCATGGAGGACATAGGCTGGGCTACTaGTGCGACCCTGACTCATTTCCCACATCTTTCAAACCCTTAAAG +
Preference number: 1 (lower is better)
Translates to: GVSSPGRHGGHRLGY*CDPDSFPTSFKPLK
Trigger: CTTTAAGGGTTTGAAAGATGTGGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCATGGCGCCCAGGACTAGAAACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR TCA 90 bp GGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTCACTAGGAGACACGATTCCTTCCTC +
Preference number: 1 (lower is better)
Translates to: GFQGSNECIPHAQPF*HDKVQVTRRHDSFL
Trigger: GAGGAAGGAATCGTGTCTCCTAGTGACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACCCCTGGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR TCA 90 bp GGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTCACTAGGAGACACGATTCCTTCTCT +
Preference number: 1 (lower is better)
Translates to: GFQGSNECIPHAQPF*HDKVQVTRRHDSFS
Trigger: AGAGAAGGAATCGTGTCTCCTAGTGACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACCCCTGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR TCA 90 bp AGAGGAGTGGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCAC +
Preference number: 1 (lower is better)
Translates to: RGVEAALQEIHWGCT*LFNLASLMRHSSLH
Trigger: GTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCCACTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR CCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCGGGGCCGTCTCCGGGTaGGGGACCAGCTCAACCAGC +
Preference number: 2 (lower is better)
Translates to: RQPRERKCCCAARPRAMIGAVSG*GTSSTS
Trigger: GCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCC...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: QEIDSPENASAAVPPGPGPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp CCTCCCCTCCCTGCTGCCGGGAGGCGAACGGGCTGGTGCCGGCCTGTGCTTAGCAGGCTGGGCTACTGCTaGGACCCTGACTCATTTCCC +
Preference number: 2 (lower is better)
Translates to: PPLPAAGRRTGWCRPVLSRLGYC*DPDSFP
Trigger: GGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCT...GCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAGGGAGGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR-3UTR GCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RQPRERKCCCAARPRAMIGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACGGGAGGCGAACGGGCTaGTGCCGGCCTGTGCTTAGC +
Preference number: 2 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHGRRTG*CRPVLS
Trigger: GCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCC...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR-3UTR GCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: QVAGNRQPRERKCCCAARGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp AGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RHSSLHCLLAAKCSGSSGGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...CCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR CCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 2 (lower is better)
Translates to: RQPRERKCCCAARPRAMIPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp ACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: TRPSTASWQLSAPGHQGPGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...AGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR GCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 2 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 2 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp GGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 2 (lower is better)
Translates to: GGRKSTAPRTQVLLCRQAGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...GGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 2 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 2 (lower is better)
Translates to: PRWQEIDSPENASAAVPPGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAACCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: QPRERKCCCAARPRAMIQPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 2 (lower is better)
Translates to: RWQEIDSPENASAAVPPGGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp CCGGGTGGGGGACCAGCTCAACCAGCGGGATGTAGTATGGCGGATTCACAGGATCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 2 (lower is better)
Translates to: PGGGPAQPAGCSMADSQDPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...ATCCTGTGAATCCGCCATACTACATCCCGCTGGTTGAGCTGGTCCCCCACCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp CACCAGCAGGCTGAGAACCTGCCGAGGGTTGCAGATTCATTCCCAGGCACCTCCGCCAATAAGATCACGTaGCCCAGGGAGCACGCCTCC +
Preference number: 2 (lower is better)
Translates to: HQQAENLPRVADSFPGTSANKIT*PREHAS
Trigger: GGAGGCGTGCTCCCTGGGTCACGTGATCTTATTGGC...GGAGGTGCCTGGGAATGAATCTGCAACCCTCGGCAGGTTCTCAGCCTGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR-3UTR TCA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 2 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: RWQEIDSPENASAAVPPGRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp GAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: ERKCCCAARPRAMIQSDGPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...CCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 2 (lower is better)
Translates to: YLPRWQEIDSPENASAAVTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp GTGCTCCGGGTCATCAGGGACCTTCATGCACATGTCCTGGTTAACCTTCTCAGCCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: VLRVIRDLHAHVLVNLLSPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...GCTGAGAAGGTTAACCAGGACATGTGCATGAAGGTCCCTGATGACCCGGAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR CCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGGGGTGGAGTGGCCAGTaGAGCAAACTCGAGTGCCCG +
Preference number: 2 (lower is better)
Translates to: YLPRWQEIDSPENASAAVGWSGQ*SKLECP
Trigger: CGGGCACTCGAGTTTGCTCCACTGGCCACTCCACCC...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR CCA 90 bp CCGGGTGGGGGACCAGCTCAACCAGCGGGATGTAGTATGGCGGATTCACAGGATGGAACGGGGGTGGAGTaGCCAGTGGAGCAAACTCGA +
Preference number: 2 (lower is better)
Translates to: PGGGPAQPAGCSMADSQDGTGVE*PVEQTR
Trigger: TCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCC...ATCCTGTGAATCCGCCATACTACATCCCGCTGGTTGAGCTGGTCCCCCACCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR GCA 90 bp ACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTTCATGCACATGTACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 2 (lower is better)
Translates to: TASWQLSAPGHQGPSCTCTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...ACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR GCA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: GLAVFPNRASNERSGSCIPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp AGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGCATAGGCTGGGCTACTaGTGCGACCCTGACTCATTT +
Preference number: 2 (lower is better)
Translates to: RHSSLHCLLAAKCSGSSGHRLGY*CDPDSF
Trigger: AAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATG...CCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR-3UTR CCA 90 bp GCAACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGGCGACATGAGCACTGGGCTTGTGTaGATCACCCCAGGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: ATARSRVLCHLQPYEGDMSTGLV*ITPGQR
Trigger: CCGCTGCCCTGGGGTGATCCACACAAGCCCAGTGCT...CATGTCGCCCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644153.1
3UTR-3UTR TCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 2 (lower is better)
Translates to: QAAHKTASLGSPWAATYVPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR CAA 90 bp GACCCAGGGAGCACGCCTCCGGCAGGGGAAGTAAGTGTCAGTAGATaGTGGCCAGACATGTCCATCTGGCATTTCCAAGACCACAGGGCT +
Preference number: 2 (lower is better)
Translates to: DPGSTPPAGEVSVSR*WPDMSIWHFQDHRA
Trigger: AGCCCTGTGGTCTTGGAAATGCCAGATGGACATGTCTGGCCACAATCTACTGACACTTACTTCCCCTGCCGGAGGCGTGCTCCCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR-3UTR TCA 90 bp GCAACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGGCGACATGGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 2 (lower is better)
Translates to: ATARSRVLCHLQPYEGDMGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...CATGTCGCCCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 2 (lower is better)
Translates to: QAAHKTASLGSPWAATYVGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp AATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAACCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 2 (lower is better)
Translates to: NLQVICPGGRKSTAPRTQPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...TTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp AGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 2 (lower is better)
Translates to: RHSSLHCLLAAKCSGSSGTTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...CCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp AACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: NLASLMRHSSLHCLLAAKRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...CTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR GCA 90 bp GTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: VICPGGRKSTAPRTQVLLRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...CAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp GGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGC +
Preference number: 2 (lower is better)
Translates to: GGRKSTAPRTQVLLCRQAVGHVL*LRCICR
Trigger: GCGACAGATACAGCGAAGGCATAAAACATGTCCTAC...GGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR CCA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 2 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGTTCATGCACATGTCCTaGTTAACCTTCTCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: QEIDSPENASAAVPPGPGFMHMS*LTFSAV
Trigger: CACTGCTGAGAAGGTTAACCAGGACATGTGCATGAA...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR CAA 90 bp TGCCACCTTCAGCCCTACGAGGGCGACATGAAGAAAGCACTGGGCTaGTGTGGATCACCCCAGGGCAGCGGCCAAGAAGAAAGGATTACA +
Preference number: 2 (lower is better)
Translates to: CHLQPYEGDMKKALG*CGSPQGSGQEERIT
Trigger: TGTAATCCTTTCTTCTTGGCCGCTGCCCTGGGGTGATCCACACAAGCCCAGTGCTTTCTTCATGTCGCCCTCGTAGGGCTGAAGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644153.1
3UTR-3UTR TCA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTAGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 2 (lower is better)
Translates to: HSGCTQDSQLRISVGCYLGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...TAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp GGGCTGCACTTGACTCTTCAACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCACCTACGAGGGCGACATaGAGAAAGCACTGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: GLHLTLQLGESHEALVPPPTRAT*RKHWAC
Trigger: ACAAGCCCAGTGCTTTCTTCATGTCGCCCTCGTAGG...TGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: QAAHKTASLGSPWAATYVRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 2 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPLMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACTTTTGGGCCTCTTCTTaGCATCGGGATGTTAGGATT +
Preference number: 2 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHFWASS*HRDVRI
Trigger: AATCCTAACATCCCGATGGCAAGAAGAGGCCCAAAA...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR CCA 90 bp AGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 2 (lower is better)
Translates to: RAMIQSDGQTTGLHHPTQSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...CTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 2 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 2 (lower is better)
Translates to: TQAAHKTASLGSPWAATYGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp AATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 2 (lower is better)
Translates to: NLQVICPGGRKSTAPRTQGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...TTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGACCCAGGAATTTGGATaGGGTTCTATTCAAGTTCTT +
Preference number: 2 (lower is better)
Translates to: QEIDSPENASAAVPPGPGTQEFG*GSIQVL
Trigger: AAGAACTTGAATAGAACCTCATCCAAATTCCTGGGT...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp CTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTTCATGCACATGTCCTGGCAGGATGAGCCACGATaGATTGCTTCACATGGACCA +
Preference number: 2 (lower is better)
Translates to: LLAAKCSGSSGTFMHMSWQDEPR*IASHGP
Trigger: TGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTG...CCAGGACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCGCAGGAACACAGACTTaGTACCCAGGAATTTGGATG +
Preference number: 2 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCAGTQT*YPGIWM
Trigger: CATCCAAATTCCTGGGTAGCAAGTCTGTGTTCCTGC...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp ATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGGT +
Preference number: 2 (lower is better)
Translates to: IKGLQCSQIGPPMRGVEAPSTAS*QLSAPG
Trigger: ACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR CCA 90 bp CGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCAAGATCCAGTCTCTTTaGTGGAACGGGGGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: RMGHCPIFFIRAWVLSTVKIQSL*WNGGGV
Trigger: CACTCCACCCCCGTTCCACCAAAGAGACTGGATCTT...GACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR TCA 90 bp TTCTGCATTGAGATGCATGGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 2 (lower is better)
Translates to: FCIEMHGFQGSNECIPHAPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...GGCATGCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAATCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 2 (lower is better)
Translates to: QPRERKCCCAARPRAMIQSLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp AAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: KVKISRLSAQVAGNRQPRRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...TCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp GTTTCCAGGGGTCCAATGAATGCATACCGCATGCCCAACCCTTCTGACATGACACCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: VSRGPMNAYRMPNPSDMTPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...TGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACCCCTGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp GTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGCAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: VICPGGRKSTAPRTQVLLQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...CAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000644153.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 2 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp TCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 2 (lower is better)
Translates to: SGLAWGTVQSSSSGRGFCPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...ACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp GAAAAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCATCCAGTCTCTTTGGTaGAACGGGGGTGGAGTGGCC +
Preference number: 2 (lower is better)
Translates to: EKVKISRLSAQVAGNRQPIQSLW*NGGGVA
Trigger: GGCCACTCCACCCCCGTTCCACCAAAGAGACTGGAT...GGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR CAA 90 bp ATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCT +
Preference number: 2 (lower is better)
Translates to: ISVGCYLCHRGLIKG*QCSQIGPPMRGVEA
Trigger: AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCCTCTGTGACATAGGTAGCAGCCCACGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCTATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: QAAHKTASLGSPWAATYVYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp ATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 2 (lower is better)
Translates to: IKGLQCSQIGPPMRGVEAGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp TTCTGCATTGAGATGCATGGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 2 (lower is better)
Translates to: FCIEMHGFQGSNECIPHAGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...GGCATGCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp CTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCGTAGGGGCCGTACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 2 (lower is better)
Translates to: LSNLLHQGVGSVHCRRGRTTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...ACGGCCCCTACGACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp ATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: IKGLQCSQIGPPMRGVEAPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp GTCCAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 2 (lower is better)
Translates to: VQKSVGHVLCLRCICRSSTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...GCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR GCA 90 bp GGGCTGCACTTGACTCTTCAACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCACAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: GLHLTLQLGESHEALVPPQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...TGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTACAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: HSGCTQDSQLRISVGCYLQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...TAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000644153.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp TCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTTTCTTCATCAGGGCGTaGGTTCTGTCCACTGTCGTA +
Preference number: 2 (lower is better)
Translates to: SGLAWGTVQSSSSGRGFCFFIRA*VLSTVV
Trigger: TACGACAGTGGACAGAACCCACGCCCTGATGAAGAA...ACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp ATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGTCACTATTGGTGGAACGGGGGTaGAGTGGCCAGTGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: MNAYRMPNPSDMTRSRSLLVERG*SGQWSK
Trigger: TTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAA...TAGTGACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR CAA 90 bp GAGAGGAGTGGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: ERSGSCITRNSLGLH*TLQLGESHEALVPP
Trigger: TGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCCACTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR TCA 90 bp AATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAATATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: NLQVICPGGRKSTAPRTQYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...TTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR TCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATTATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: TQAAHKTASLGSPWAATYYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp AGTGGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTTGACTCTTCAACTTACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 2 (lower is better)
Translates to: SGSCITRNSLGLHLTLQLTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...AAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR GCA 90 bp ACACGATATTTGATGGATAAATCCTCCTCCGTGACTATCTCCTCTACTGATCACCGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: TRYLMDKSSSVTISSTDHRERKC*CAARPR
Trigger: CCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCG...GTGATCAGTAGAGGAGATAGTCACGGAGGAGGATTTATCCATCAAATATCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp AATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAACAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: NLQVICPGGRKSTAPRTQQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...TTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000644153.1
ENST00000644593.1
3UTR-3UTR GCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATCAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: TQAAHKTASLGSPWAATYQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000644153.1
ENST00000644593.1
3UTR-3UTR CCA 90 bp GGTCCAATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 2 (lower is better)
Translates to: GPMNAYRMPNPSDMTRSRSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...CCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp GTGCTCCGGGTCATCAGGGACCTTCATGCACATGTCCTGGTTAACCTTCTCAGCTGGAACACATTCTTTTaGGCCTCTTCTTGCCATCGG +
Preference number: 2 (lower is better)
Translates to: VLRVIRDLHAHVLVNLLSWNTFF*ASSCHR
Trigger: CCGATGGCAAGAAGAGGCCCAAAAGAATGTGTTCCA...GCTGAGAAGGTTAACCAGGACATGTGCATGAAGGTCCCTGATGACCCGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp GAAAAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCAGCGGGATGTAGTATaGCGGATTCACAGGATGAGC +
Preference number: 2 (lower is better)
Translates to: EKVKISRLSAQVAGNRQPQRDVV*RIHRMS
Trigger: GCTCATCCTGTGAATCCGCCATACTACATCCCGCTG...GGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp GTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 2 (lower is better)
Translates to: VICPGGRKSTAPRTQVLLSLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...CAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCAAGTCCACTGTCAACTaGGAAACAGGAGAAAAATTA +
Preference number: 2 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCKSTVN*ETGEKL
Trigger: TAATTTTTCTCCTGTTTCTCAGTTGACAGTGGACTT...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp GGCCTCGCTGATGATTGCATATTGCAGGCGGTTCAGAACGAAGCCGGCCACCTCGACAAGAAGTGGAACTaGTTAAGATCACTCGATCAT +
Preference number: 2 (lower is better)
Translates to: GLADDCILQAVQNEAGHLDKKWN*LRSLDH
Trigger: ATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTC...GAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp ACACCCACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCGGCCCAGGCCCATACCCTGCCCTCATaGGAAAGAATTTACAGGCAA +
Preference number: 2 (lower is better)
Translates to: TPTLTNQETKNSISAAQAHTLPS*ERIYRQ
Trigger: TTGCCTGTAAATTCTTTCCCATGAGGGCAGGGTATG...GGCCTGGGCCGCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGTGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR-3UTR GCA 90 bp GGGCTGCACTTGACTCTTCAACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCAGACAAGAAGTGGAACTaGTTAAGATCACTCGATCAT +
Preference number: 2 (lower is better)
Translates to: GLHLTLQLGESHEALVPPDKKWN*LRSLDH
Trigger: ATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTC...TGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCTGCTACCCAGGAATTTaGATGAGGTTCTATTCAAGT +
Preference number: 2 (lower is better)
Translates to: QAAHKTASLGSPWAATYVCYPGI*MRFYSS
Trigger: ACTTGAATAGAACCTCATCCAAATTCCTGGGTAGCA...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp AGTGGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTTGACTCTTCAACTTATGGAGGACATAGGCTaGGCTACTGCTGCGACCCTG +
Preference number: 2 (lower is better)
Translates to: SGSCITRNSLGLHLTLQLMEDIG*ATAATL
Trigger: CAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCAT...AAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR-3UTR TCA 90 bp TTCTGCATTGAGATGCATGGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCTATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: FCIEMHGFQGSNECIPHAYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...GGCATGCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp TCCTCCTCCGTGACTATCTCCTCTACTGATCACCAGCTACACCGAACCATCTTTTATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: SSSVTISSTDHQLHRTIFYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...AAAGATGGTTCGGTGTAGCTGGTGATCAGTAGAGGAGATAGTCACGGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp AGTGGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTTGACTCTTCAACTTCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: SGSCITRNSLGLHLTLQLHAQPF*HDKVQV
Trigger: GACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATG...AAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp TTCTGCATTGAGATGCATGGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCGCAGGAACACAGACTTaGTACCCAGGAATTTGGATG +
Preference number: 2 (lower is better)
Translates to: FCIEMHGFQGSNECIPHAAGTQT*YPGIWM
Trigger: CATCCAAATTCCTGGGTAGCAAGTCTGTGTTCCTGC...GGCATGCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp GTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACCTTGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 2 (lower is better)
Translates to: VGHVLCLRCICRSSLTYLGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...AAGGTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp CATCATTCCGAAGGACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGCTCATCAAGTGTCAGTAGATTGTaGCCAGACATGTCCATCTGG +
Preference number: 2 (lower is better)
Translates to: HHSEGQAEPKVSNFRSSSSVSRL*PDMSIW
Trigger: CCAGATGGACATGTCTGGCCACAATCTACTGACACT...TGATGAGCTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTCCTTCGGAATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR-3UTR CCA 90 bp ACATGGACCAAGCCAGCAAACAACTTGGAAGGCATGAGACAAGAAGTGGAACTGTGGAACACATTCTTTTaGGCCTCTTCTTGCCATCGG +
Preference number: 2 (lower is better)
Translates to: TWTKPANNLEGMRQEVELWNTFF*ASSCHR
Trigger: CCGATGGCAAGAAGAGGCCCAAAAGAATGTGTTCCA...CAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTTGGTCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR CCA 90 bp TTGCTTCACATGGACCAAGCCAGCAAACAACTTGGAAGGCATGAGACAAGAAGTCGGGATGTTAGGATTTaGGGGTCCAAGATCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LLHMDQASKQLGRHETRSRDVRI*GSKIQS
Trigger: AGACTGGATCTTGGACCCCCAAATCCTAACATCCCG...ACTTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTTGGTCCATGTGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR TCA 90 bp TTTCCAGGGCGTTCCTTATCTGCTGTTGCTCAATGTCATAGAGTTTCACCTGGACCCAGCTTCGCCCAATaGCTCCACTATGTTAATCTT +
Preference number: 2 (lower is better)
Translates to: FPGRSLSAVAQCHRVSPGPSFAQ*LHYVNL
Trigger: AAGATTAACATAGTGGAGTCATTGGGCGAAGCTGGG...TCCAGGTGAAACTCTATGACATTGAGCAACAGCAGATAAGGAACGCCCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646414.1
3UTR-3UTR CCA 90 bp CAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTACAGCGGGATGTAGTATaGCGGATTCACAGGATGAGC +
Preference number: 2 (lower is better)
Translates to: QKSVGHVLCLRCICRSSLQRDVV*RIHRMS
Trigger: GCTCATCCTGTGAATCCGCCATACTACATCCCGCTG...TAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR TCA 90 bp AGTGGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTTGACTCTTCAACTTATAAATCCTCCTCCGTaGCTATCTCCTCTACTGATC +
Preference number: 2 (lower is better)
Translates to: SGSCITRNSLGLHLTLQLINPPP*LSPLLI
Trigger: GATCAGTAGAGGAGATAGTCACGGAGGAGGATTTAT...AAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR-3UTR GCA 90 bp CGATATTTGATGGATAAATCCTCCTCCGTGACTATCTCCTCTACTGATCACCAGCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 2 (lower is better)
Translates to: RYLMDKSSSVTISSTDHQLMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...CTGGTGATCAGTAGAGGAGATAGTCACGGAGGAGGATTTATCCATCAAATATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644153.1
3UTR-3UTR TCA 90 bp AAACTGAGGCATGGAGGAATTAAGTCCACAAGGGTGATAAGTTATGGATCTATGAAGCAATCTGACTCCTaGGTCCTTCCTCTTAACCAC +
Preference number: 2 (lower is better)
Translates to: KLRHGGIKSTRVISYGSMKQSDS*VLPLNH
Trigger: GTGGTTAAGAGGAAGGACTCAGGAGTCAGATTGCTT...CATAGATCCATAACTTATCACCCTTGTGGACTTAATTCCTCCATGCCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646414.1
3UTR CAA 90 bp GAATTTACAGGCAACAAACTTAGCTACTGTCCAGCCAAAAGTCTATaGTCACAACACAATGTCCTTCATTATGCTAATGCCTTAAAAATG +
Preference number: 2 (lower is better)
Translates to: EFTGNKLSYCPAKSL*SQHNVLHYANALKM
Trigger: CATTTTTAAGGCATTAGCATAATGAAGGACATTGTGTTGTGACAATAGACTTTTGGCTGGACAGTAGCTAAGTTTGTTGCCTGTAAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR GCA 72 bp CTGCTGCCGGGAGGCGAACGGGCTGGTGCCGGCCTGTaGTTAGCAAGTCAAGTCAGAAGCCAGGGCCGGGAT +
Preference number: 3 (lower is better)
Translates to: LLPGGERAGAGL*LASQVRSQGRD
Trigger: ATCCCGGCCCTGGCTTCTGACTTGACTTGCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR GCA 72 bp CCTCCCCTCCCTGCTGCCGGGAGGCGAACGGGCTGGTaGCGGCCTGTGCTTAGCAAGTCAAGTCAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: PPLPAAGRRTGW*RPVLSKSSQKP
Trigger: TGGCTTCTGACTTGACTTGCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAGGGAGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR TCA 72 bp CTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCTGCACCACCCCACTCA +
Preference number: 3 (lower is better)
Translates to: LLCRQAQGYDPK*RADYRPAPPHS
Trigger: TGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR GCA 72 bp CGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTaGACACAAGACAGCCAGCTTAGGATCTCCGTGGGC +
Preference number: 3 (lower is better)
Translates to: RADYRPAPPHSG*TQDSQLRISVG
Trigger: GCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR TCA 72 bp AACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGACTACCGGCCTGCACC +
Preference number: 3 (lower is better)
Translates to: NASAAVPPGPGL*SKVTGRLPACT
Trigger: GGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR GCA 72 bp TTAACATACTCTCCCTCACATTCCTCCCCTCCCTGCTaGCGGGAGGCGAACGGGCTGGTGCCGGCCTGTGCT +
Preference number: 3 (lower is better)
Translates to: LTYSPSHSSPPC*REANGLVPACA
Trigger: AGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAGGGAGGGGAGGAATGTGAGGGAGAGTATGTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR CCA 72 bp ATTCCTCCCCTCCCTGCTGCCGGGAGGCGAACGGGCTaGTGCCGGCCTGTGCTTAGCAAGTCAAGTCAGAAG +
Preference number: 3 (lower is better)
Translates to: IPPLPAAGRRTG*CRPVLSKSSQK
Trigger: CTTCTGACTTGACTTGCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAGGGAGGGGAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR-3UTR CAA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 3 (lower is better)
Translates to: RQPRERKCCCAARPRAMIMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR GCA 72 bp GTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGT +
Preference number: 3 (lower is better)
Translates to: VAGNRQPRERKC*CAARPRAMIQS
Trigger: ACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR GCA 72 bp AGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTaGTCCGGGTCATCAGGGACCTTCATGCACATGTCC +
Preference number: 3 (lower is better)
Translates to: RHSSLHCLLAAK*SGSSGTFMHMS
Trigger: GGACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR CCA 72 bp GGGGTCCAAGATCCAGTCTCTTTGGTGGAACGGGGGTaGAGTGGCCAGTGGAGCAAACTCGAGTGCCCGTAC +
Preference number: 3 (lower is better)
Translates to: GVQDPVSLVERG*SGQWSKLECPY
Trigger: GTACGGGCACTCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR CAA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 3 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR TCA 72 bp GGCCCAGGCCCTAAGGACAGCAGTCCAGCACAGGGATaGCATCATTCCGAAGGACAGGCAGAACCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: GPGPKDSSPAQG*HHSEGQAEPKV
Trigger: GACCTTGGGTTCTGCCTGTCCTTCGGAATGATGTCATCCCTGTGCTGGACTGCTGTCCTTAGGGCCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR TCA 72 bp GGGGCTGCACTTGACTCTTCAACTTGGCGAGTCTCATaGGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: GAALDSSTWRVS*GTRPSTASWQL
Trigger: TAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR GCA 72 bp TCCACTAGCCGCCAGGCCTCGCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAGCCGGCCACCTCCTTC +
Preference number: 3 (lower is better)
Translates to: STSRQASLMIAY*RRFRTKPATSF
Trigger: GAAGGAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCCTGGCGGCTAGTGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR CCA 72 bp TCAGAACGAAGCCGGCCACCTCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGG +
Preference number: 3 (lower is better)
Translates to: SERSRPPPSGLA*GTVQSSSSGRG
Trigger: CCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGGCTTCGTTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR CCA 72 bp CCAAGATCCAGTCTCTTTGGTGGAACGGGGGTGGAGTaGCCAGTGGAGCAAACTCGAGTGCCCGTACTGGGT +
Preference number: 3 (lower is better)
Translates to: PRSSLFGGTGVE*PVEQTRVPVLG
Trigger: ACCCAGTACGGGCACTCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR CAA 90 bp GAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 3 (lower is better)
Translates to: ERKCCCAARPRAMIQSDGGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...CCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CAA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 3 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR GCA 72 bp CCTGGGCGCCATGGAGGACATAGGCTGGGCTACTGCTaGGACCCTGACTCATTTCCCACATCTTTCAAACCC +
Preference number: 3 (lower is better)
Translates to: PGRHGGHRLGYC*DPDSFPTSFKP
Trigger: GGGTTTGAAAGATGTGGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCATGGCGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR CCA 72 bp GCGTTTCTAGTCCTGGGCGCCATGGAGGACATAGGCTaGGCTACTGCTGCGACCCTGACTCATTTCCCACAT +
Preference number: 3 (lower is better)
Translates to: AFLVLGAMEDIG*ATAATLTHFPH
Trigger: ATGTGGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCATGGCGCCCAGGACTAGAAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR-3UTR CAA 90 bp GGCCTCGCTGATGATTGCATATTGCAGGCGGTTCAGAACGAAGCCGGCCACCTCATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 3 (lower is better)
Translates to: GLADDCILQAVQNEAGHLMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...GAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR GCA 72 bp TCATCACCACCAACTCACACCAGCAGGCTGAGAACCTaGCGAGGGTTGCAGATTCATTCCCAGGCACCTCCA +
Preference number: 3 (lower is better)
Translates to: SSPPTHTSRLRT*RGLQIHSQAPP
Trigger: TGGAGGTGCCTGGGAATGAATCTGCAACCCTCGGCAGGTTCTCAGCCTGCTGGTGTGAGTTGGTGGTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR CCA 72 bp GTTAGGATTTGGGGGTCCAAGATCCAGTCTCTTTGGTaGAACGGGGGTGGAGTGGCCAGTGGAGCAAACTCG +
Preference number: 3 (lower is better)
Translates to: VRIWGSKIQSLW*NGGGVASGANS
Trigger: CGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTGGACCCCCAAATCCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR CAA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 3 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR-3UTR CAA 90 bp CCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTCTGGAACACATTCTTTaGGGCCTCTTCTTGCCATCG +
Preference number: 3 (lower is better)
Translates to: PGYLPRWQEIDSPENASALEHIL*GLFLPS
Trigger: CGATGGCAAGAAGAGGCCCAAAAGAATGTGTTCCAG...AGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR GCA 72 bp AGTCCTGGGCGCCATGGAGGACATAGGCTGGGCTACTaGTGCGACCCTGACTCATTTCCCACATCTTTCAAA +
Preference number: 3 (lower is better)
Translates to: SPGRHGGHRLGY*CDPDSFPTSFK
Trigger: TTTGAAAGATGTGGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCATGGCGCCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
3UTR CCA 72 bp GATGTTAGGATTTGGGGGTCCAAGATCCAGTCTCTTTaGTGGAACGGGGGTGGAGTGGCCAGTGGAGCAAAC +
Preference number: 3 (lower is better)
Translates to: DVRIWGSKIQSL*WNGGGVASGAN
Trigger: GTTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTGGACCCCCAAATCCTAACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR CCA 72 bp ACGCCTCCGGCAGGGGAAGTAAGTGTCAGTAGATTGTaGCCAGACATGTCCATCTGGCATTTCCAAGACCAC +
Preference number: 3 (lower is better)
Translates to: TPPAGEVSVSRL*PDMSIWHFQDH
Trigger: GTGGTCTTGGAAATGCCAGATGGACATGTCTGGCCACAATCTACTGACACTTACTTCCCCTGCCGGAGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR-3UTR CAA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGAAGCCAGCAAACAACTaGGAAGGCATGAGACAAGAA +
Preference number: 3 (lower is better)
Translates to: YLPRWQEIDSPENASAAVKPANN*EGMRQE
Trigger: TTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTT...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR TCA 72 bp GGGTCCAATGAATGCATACCGCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTCACTAGGAGACACGAT +
Preference number: 3 (lower is better)
Translates to: GSNECIPHAQPF*HDKVQVTRRHD
Trigger: ATCGTGTCTCCTAGTGACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
3UTR CCA 72 bp TTTTGGGCCTCTTCTTGCCATCGGGATGTTAGGATTTaGGGGTCCAAGATCCAGTCTCTTTGGTGGAACGGG +
Preference number: 3 (lower is better)
Translates to: FWASSCHRDVRI*GSKIQSLWWNG
Trigger: CCCGTTCCACCAAAGAGACTGGATCTTGGACCCCCAAATCCTAACATCCCGATGGCAAGAAGAGGCCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR CAA 90 bp TTGGCAGACATGTCTGAAGTAAAGCTCAACGATGAAGTTCTGGAATCTCAGGGCAGAACCTGCCGAGGGTaGCAGATTCATTCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: LADMSEVKLNDEVLESQGRTCRG*QIHSQA
Trigger: TGCCTGGGAATGAATCTGCAACCCTCGGCAGGTTCT...GCCCTGAGATTCCAGAACTTCATCGTTGAGCTTTACTTCAGACATGTCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR-3UTR CAA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTAAGCCAGCAAACAACTaGGAAGGCATGAGACAAGAA +
Preference number: 3 (lower is better)
Translates to: GLAVFPNRASNERSGSCIKPANN*EGMRQE
Trigger: TTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTT...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR TCA 72 bp GAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGTCTCATGAGGCACTCG +
Preference number: 3 (lower is better)
Translates to: EAALQEIHWGCT*LFNLASLMRHS
Trigger: CGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR GCA 72 bp GGATGTAGTATGGCGGATTCACAGGATGAGCCACGATaGATTGCTTCACATGGACCAAGCCAGCAAACAACT +
Preference number: 3 (lower is better)
Translates to: GCSMADSQDEPR*IASHGPSQQTT
Trigger: AGTTGTTTGCTGGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCCATACTACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR-3UTR CAA 90 bp AGTGGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTTGACTCTTCAACTTGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 3 (lower is better)
Translates to: SGSCITRNSLGLHLTLQLGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...AAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR CAA 90 bp CAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTACAAGATCCAGTCTCTTaGGTGGAACGGGGGTGGAGT +
Preference number: 3 (lower is better)
Translates to: QKSVGHVLCLRCICRSSLQDPVS*VERGWS
Trigger: ACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTG...TAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643035.1
3UTR-3UTR CAA 90 bp TCTTCTTCAGTTCTAGATCTTCTGGAACACATTCTTTTGGGCCTCTTCTTGCCACTGGAACACATTCTTTaGGGCCTCTTCTTGCCATCG +
Preference number: 3 (lower is better)
Translates to: SSSVLDLLEHILLGLFLPLEHIL*GLFLPS
Trigger: CGATGGCAAGAAGAGGCCCAAAAGAATGTGTTCCAG...TGGCAAGAAGAGGCCCAAAAGAATGTGTTCCAGAAGATCTAGAACTGAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR TCA 72 bp TCACATGGACCAAGCCAGCAAACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGCTTAAGATCACTCGAT +
Preference number: 3 (lower is better)
Translates to: SHGPSQQTTWKA*DKKWNCLRSLD
Trigger: ATCGAGTGATCTTAAGCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTTGGTCCATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR GCA 72 bp CTGGAATGGGTCCAAAAGTCTGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGCAGTAGCTTAACATAC +
Preference number: 3 (lower is better)
Translates to: LEWVQKSVGHVL*LRCICRSSLTY
Trigger: GTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTGGACCCATTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
3UTR-3UTR CAA 90 bp ACAGGCAACAAACTTAGCTACTGTCCAGCCAAAAGTCTATTGTCACAACACAATGTAAGTGTCAGTAGATaGTGGCCAGACATGTCCATC +
Preference number: 3 (lower is better)
Translates to: TGNKLSYCPAKSLLSQHNVSVSR*WPDMSI
Trigger: GATGGACATGTCTGGCCACAATCTACTGACACTTAC...ATTGTGTTGTGACAATAGACTTTTGGCTGGACAGTAGCTAAGTTTGTTGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR TCA 72 bp AAGAAGTGGAACTGCTTAAGATCACTCGATCATCAATaGTGGAATCTAACTGAGCAAAAATCTTCTTCTTCA +
Preference number: 3 (lower is better)
Translates to: KKWNCLRSLDHQ*WNLTEQKSSSS
Trigger: TGAAGAAGAAGATTTTTGCTCAGTTAGATTCCATCATTGATGATCGAGTGATCTTAAGCAGTTCCACTTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp CCTCCCCTCCCTGCTGCCGGGAGGCGAACGGGCTGGTGCCGGCCTGTGCTTAGCGGGGCCGTCTCCGGGTaGGGGACCAGCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: PPLPAAGRRTGWCRPVLSGAVSG*GTSSTS
Trigger: GCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCC...GCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAGGGAGGGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR GCA 90 bp AGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGTCCTCCCCTCCCTGCTaGCGGGAGGCGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: RHSSLHCLLAAKCSGSSGSSPPC*REANGL
Trigger: CAGCCCGTTCGCCTCCCGGCAGCAGGGAGGGGAGGA...CCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR CCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCGGGGCCGTCTCCGGGTaGGGGACCAGCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGGAVSG*GTSSTS
Trigger: GCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCC...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATGGGGCCGTCTCCGGGTaGGGGACCAGCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDGAVSG*GTSSTS
Trigger: GCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCC...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGGGGCCGTCTCCGGGTaGGGGACCAGCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQGAVSG*GTSSTS
Trigger: GCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCC...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGRERKC*CAARPR
Trigger: CCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCG...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGRKSTAPRTQVLLCRQARERKC*CAARPR
Trigger: CCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCG...GGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCACCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRWQEIDSPENASAAVPPPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAACATTCCTCCCCTCCCTaGTGCCGGGAGGCGAACGGG +
Preference number: 4 (lower is better)
Translates to: QPRERKCCCAARPRAMIQHSSPP*CREANG
Trigger: CCCGTTCGCCTCCCGGCAGCAGGGAGGGGAGGAATG...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR GCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRERKCCCAARPRAMIQSPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...ACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TRPSTASWQLSAPGHQGPPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...AGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp GCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCGAACGGGCTGGTaGCGGCCTGTGCTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: AQVAGNRQPRERKCCCAARRTGW*RPVLSK
Trigger: CTTGCTAAGCACAGGCCGGCACCAGCCCGTTCGCCT...GGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR CCA 90 bp AGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGGGGCCGTCTCCGGGTaGGGGACCAGCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: RAMIQSDGQTTGLHHPTQGAVSG*GTSSTS
Trigger: GCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCC...CTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CCTCCCCTCCCTGCTGCCGGGAGGCGAACGGGCTGGTGCCGGCCTGTGCTTAGCCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: PPLPAAGRRTGWCRPVLSPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...GCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAGGGAGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR CCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGAGCACTGGGCTTGTGTaGATCACCCCAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGSTGLV*ITPGQR
Trigger: CCGCTGCCCTGGGGTGATCCACACAAGCCCAGTGCT...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCTCCTGGCAGCTAAGTaGTCCGGGTCATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GGRKSTAPRTQVLLCRQALLAAK*SGSSGT
Trigger: GGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG...GGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCACTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGHSSLH*LLAAKC
Trigger: GCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTG...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: QPRERKCCCAARPRAMIQTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAACCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: QPRERKCCCAARPRAMIQPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGPSTAS*QLSAPG
Trigger: ACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQPSTAS*QLSAPG
Trigger: ACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRPSTAS*QLSAPG
Trigger: ACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCGGGTGGAGTGGCCAGTaGAGCAAACTCGAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRGWSGQ*SKLECP
Trigger: CGGGCACTCGAGTTTGCTCCACTGGCCACTCCACCC...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp ATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGAGGCGAACGGGCTaGTGCCGGCCTGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: MRHSSLHCLLAAKCSGSSGRRTG*CRPVLS
Trigger: GCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCC...TGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR TCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCCCAGCTTCGCCCAATaGCTCCACTGCCAACGATCA +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMIPSFAQ*LHCQRS
Trigger: TGATCGTTGGCAGTGGAGTCATTGGGCGAAGCTGGG...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCACTTGGCGAGTCTCATaGGGCACTCGTCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMITWRVS*GTRPST
Trigger: AGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGT...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp GCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCACTTGGCGAGTCTCATaGGGCACTCGTCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: AQVAGNRQPRERKCCCAATWRVS*GTRPST
Trigger: AGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGT...GGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CTGCTGCCGGGAGGCGAACGGGCTGGTGCCGGCCTGTGCTTAGCAAGTCAAGTCGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: LLPGGERAGAGLCLASQVGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...GACTTGACTTGCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR TCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAACCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QPRERKCCCAARPRAMIQPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGCTCCTGGCAGCTAAGTaGTCCGGGTCATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQLLAAK*SGSSGT
Trigger: GGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CTGCTGCCGGGAGGCGAACGGGCTGGTGCCGGCCTGTGCTTAGCAAGTCAAGTCCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLPGGERAGAGLCLASQVPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...GACTTGACTTGCTAAGCACAGGCCGGCACCAGCCCGTTCGCCTCCCGGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR GCA 90 bp GCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AQVAGNRQPRERKCCCAAPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...GGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCAGGCTGGGCTACTGCTaGGACCCTGACTCATTTCCC +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMIRLGYC*DPDSFP
Trigger: GGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCT...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR CCA 90 bp CGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCGGGGCCGTCTCCGGGTaGGGGACCAGCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: RMGHCPIFFIRAWVLSTVGAVSG*GTSSTS
Trigger: GCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCC...GACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTPSTAS*QLSAPG
Trigger: ACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: TRPSTASWQLSAPGHQGPPSTAS*QLSAPG
Trigger: ACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...AGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCGGAACGGGGGTGGAGTaGCCAGTGGAGCAAACTCGA +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGGTGVE*PVEQTR
Trigger: TCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCC...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCCAGCTTCGCCCAATaGCTCCACTGCCAACGATCA +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRPSFAQ*LHCQRS
Trigger: TGATCGTTGGCAGTGGAGTCATTGGGCGAAGCTGGG...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp GCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: AQVAGNRQPRERKCCCAAGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...GGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGHAQPF*HDKVQV
Trigger: GACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATG...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCACTTGGCGAGTCTCATaGGGCACTCGTCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGTWRVS*GTRPST
Trigger: AGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGT...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCAGGGGTCCAATGAATaGATACCGCATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: AQVAGNRQPRERKCCCAAQGSNE*IPHAQP
Trigger: GGGTTGGGCATGCGGTATGCATTCATTGGACCCCTG...GGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTCTCCTGGCAGCTAAGTaGTCCGGGTCATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: TRPSTASWQLSAPGHQGPLLAAK*SGSSGT
Trigger: GGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG...AGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp GAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCACTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: ERKCCCAARPRAMIQSDGHSSLH*LLAAKC
Trigger: GCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTG...CCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: YLPRWQEIDSPENASAAVGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VICPGGRKSTAPRTQVLLGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...CAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTCGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGYLPRWQEIDSPENASARERKC*CAARPR
Trigger: CCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCG...AGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QAAHKTASLGSPWAATYVPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCGTAGGGGCCCCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: HCPIFFIRAWVLSTVVGAPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...GGCCCCTACGACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCCTGGAAGCCTCCACTaGCAAACAGCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ERKCCCAARPRAMIQSDGPGSLH*QTAWPS
Trigger: GCTGGGCCATGCTGTTTGCCAGTGGAGGCTTCCAGG...CCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACCCTGGAAGCCTCCACTaGCAAACAGCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHPGSLH*QTAWPS
Trigger: GCTGGGCCATGCTGTTTGCCAGTGGAGGCTTCCAGG...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGGGGCCGTCTCCGGGTaGGGGACCAGCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: TQAAHKTASLGSPWAATYGAVSG*GTSSTS
Trigger: GCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCC...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp AGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGCCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: RAMIQSDGQTTGLHHPTQPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...CTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGTTGGTGGAACGGGGGTaGAGTGGCCAGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQLVERG*SGQWSK
Trigger: TTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAA...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCTTGGTGGAACGGGGGTaGAGTGGCCAGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGLVERG*SGQWSK
Trigger: TTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAA...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCCCCAGCTTCGCCCAATaGCTCCACTGCCAACGATCA +
Preference number: 4 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTPSFAQ*LHCQRS
Trigger: TGATCGTTGGCAGTGGAGTCATTGGGCGAAGCTGGG...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPHAQPF*HDKVQV
Trigger: GACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATG...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGHAQPF*HDKVQV
Trigger: GACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATG...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp GGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCTTTCCAGGGGTCCAATaGATGCATACCGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: GGRKSTAPRTQVLLCRQAFPGVQ*MHTACP
Trigger: TGGGCATGCGGTATGCATTCATTGGACCCCTGGAAA...GGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCACACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: PRWQEIDSPENASAAVPPHWGCT*LFNLAS
Trigger: ACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTG...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARHWGCT*LFNLAS
Trigger: ACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTG...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRHWGCT*LFNLAS
Trigger: ACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTG...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCTACGAGGGCGACATaGAGAAAGCACTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRPTRAT*RKHWAC
Trigger: ACAAGCCCAGTGCTTTCTTCATGTCGCCCTCGTAGG...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCGGCCTCGCTGATGATTaGATATTGCAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMIGLADD*ILQAVQ
Trigger: CTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCCAGGGGTCCAATGAATaGATACCGCATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPQGSNE*IPHAQP
Trigger: GGGTTGGGCATGCGGTATGCATTCATTGGACCCCTG...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCTCCTGGCAGCTAAGTaGTCCGGGTCATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCLLAAK*SGSSGT
Trigger: GGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCTGGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QDSQLRISVGCYLCHRGLGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...CAGCCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCCGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QAAHKTASLGSPWAATYVRERKC*CAARPR
Trigger: CCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCG...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: AQVAGNRQPRERKCCCAAPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...GGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: GGRKSTAPRTQVLLCRQAPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...GGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: YLPRWQEIDSPENASAAVPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGTCTCAGCAGTGGCCCTaGAAAACTCTGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGSQQWP*KTLEWV
Trigger: GACCCATTCCAGAGTTTTCCAGGGCCACTGCTGAGA...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: ERKCCCAARPRAMIQSDGGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...CCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGACACGATTCCTTCTCTaGTCCTTCGGACAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGTRFLL*SFGQSQ
Trigger: CTGGGACTGTCCGAAGGACCAGAGAAGGAATCGTGT...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCGGAGGCCGAGGCGAGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCGGRGE*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACTCGCCTCGGCCTCC...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643035.1
CDS-3UTR CCA 90 bp AACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGGGGTGGAGTGGCCAGTaGAGCAAACTCGAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: NLASLMRHSSLHCLLAAKGWSGQ*SKLECP
Trigger: CGGGCACTCGAGTTTGCTCCACTGGCCACTCCACCC...CTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCTCTGGAACACATTCCTaGATGTGCATGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMISGTHS*MCMAPS
Trigger: AGAGGGTGCCATGCACATTCAGGAATGTGTTCCAGA...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643750.1
ENST00000643887.1
ENST00000644167.1
CDS-3UTR TCA 90 bp CCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: PRERKCCCAARPRAMIQSGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...ACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHHAQPF*HDKVQV
Trigger: GACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATG...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAATTTCCAGGGGTCCAATaGATGCATACCGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: QPRERKCCCAARPRAMIQFPGVQ*MHTACP
Trigger: TGGGCATGCGGTATGCATTCATTGGACCCCTGGAAA...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGTTTCCAGGGGTCCAATaGATGCATACCGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQFPGVQ*MHTACP
Trigger: TGGGCATGCGGTATGCATTCATTGGACCCCTGGAAA...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCATTTCCAGGGGTCCAATaGATGCATACCGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: PRWQEIDSPENASAAVPPFPGVQ*MHTACP
Trigger: TGGGCATGCGGTATGCATTCATTGGACCCCTGGAAA...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGTTTCCAGGGGTCCAATaGATGCATACCGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARFPGVQ*MHTACP
Trigger: TGGGCATGCGGTATGCATTCATTGGACCCCTGGAAA...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp ATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: MRHSSLHCLLAAKCSGSSGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...TGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp CGCCATGGAGGACATAGGCTGGGCTACTGCTGCGACCCTGACTCATTTCCCACACCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RHGGHRLGYCCDPDSFPTPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...TGTGGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCATGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR GCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGTTCAGAGAACCTGCCTaGTCCAGCAACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGFREPA*SSNFIS
Trigger: GGAGATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAA...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGGCCTTTCAGAGAACCTaGCTGCTCCAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGAFQRT*LLQQLH
Trigger: ATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAAAGGC...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCTGATGAGTGACAGCTaGTCTTCCACACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARLMSDS*SSTLRE
Trigger: CTCCCTGAGTGTGGAAGAGCAGCTGTCACTCATCAG...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCCTGATGAGTGACAGCTaGTCTTCCACACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPLMSDS*SSTLRE
Trigger: CTCCCTGAGTGTGGAAGAGCAGCTGTCACTCATCAG...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGCTGATGAGTGACAGCTaGTCTTCCACACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQLMSDS*SSTLRE
Trigger: CTCCCTGAGTGTGGAAGAGCAGCTGTCACTCATCAG...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCAGGATGAGCCACGATaGATTGCTTCACATGGACCA +
Preference number: 4 (lower is better)
Translates to: QEIDSPENASAAVPPGPGQDEPR*IASHGP
Trigger: TGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTG...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACCAGGGGTCCAATGAATaGATACCGCATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHQGSNE*IPHAQP
Trigger: GGGTTGGGCATGCGGTATGCATTCATTGGACCCCTG...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCCTTCTGCATTGAGATaGATGGTTTCCAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMIPSALR*MVSRGP
Trigger: TGGACCCCTGGAAACCATGCATCTCAATGCAGAAGG...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTCTCCTGGCAGCTAAGTaGTCCGGGTCATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PGYLPRWQEIDSPENASALLAAK*SGSSGT
Trigger: GGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG...AGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCTCCTGGCAGCTAAGTaGTCCGGGTCATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: YLPRWQEIDSPENASAAVLLAAK*SGSSGT
Trigger: GGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGGGGACCAGCTCAACCAGCGGGATGTAGTATGGCGGATTCACAGGATGAGCCACACTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: GGPAQPAGCSMADSQDEPHSSLH*LLAAKC
Trigger: GCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTG...TGGCTCATCCTGTGAATCCGCCATACTACATCCCGCTGGTTGAGCTGGTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCACTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: YLPRWQEIDSPENASAAVHSSLH*LLAAKC
Trigger: GCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTG...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: TRPSTASWQLSAPGHQGPRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...AGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp CCGGGTGGGGGACCAGCTCAACCAGCGGGATGTAGTATGGCGGATTCACAGGATCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PGGGPAQPAGCSMADSQDPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...ATCCTGTGAATCCGCCATACTACATCCCGCTGGTTGAGCTGGTCCCCCACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp AATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NLQVICPGGRKSTAPRTQGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...TTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATCGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TQAAHKTASLGSPWAATYRERKC*CAARPR
Trigger: CCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCG...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGACCCCGAGAACGCAAGTaGTGCTGTGCCGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KVKISRLSAQVAGNRQPRPRERK*CCAARP
Trigger: GGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG...TCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGCCTGGAAGCCTCCACTaGCAAACAGCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VICPGGRKSTAPRTQVLLPGSLH*QTAWPS
Trigger: GCTGGGCCATGCTGTTTGCCAGTGGAGGCTTCCAGG...CAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTTCATGCACATGTCCTGGCCTGGAAGCCTCCACTaGCAAACAGCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLAAKCSGSSGTFMHMSWPGSLH*QTAWPS
Trigger: GCTGGGCCATGCTGTTTGCCAGTGGAGGCTTCCAGG...CCAGGACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCACAGCGGGATGTAGTATaGCGGATTCACAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PRWQEIDSPENASAAVPPQRDVV*RIHRMS
Trigger: GCTCATCCTGTGAATCCGCCATACTACATCCCGCTG...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp GGGATGACATCATTCCGAAGGACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGGGGGCCGTCTCCGGGTaGGGGACCAGCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: GMTSFRRTGRTQGQQFPKGAVSG*GTSSTS
Trigger: GCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCC...CTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTCCTTCGGAATGATGTCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp CTTCATCAGGGCGTGGGTTCTGTCCACTGTCGTAGGGGCCGTCTCCGGGTGGGGTTCTTCATCAGGGCGTaGGTTCTGTCCACTGTCGTA +
Preference number: 4 (lower is better)
Translates to: LHQGVGSVHCRRGRLRVGFFIRA*VLSTVV
Trigger: TACGACAGTGGACAGAACCCACGCCCTGATGAAGAA...CCCCACCCGGAGACGGCCCCTACGACAGTGGACAGAACCCACGCCCTGATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGCCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACTCTCAGCAGTGGCCCTaGAAAACTCTGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHSQQWP*KTLEWV
Trigger: GACCCATTCCAGAGTTTTCCAGGGCCACTGCTGAGA...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATTCTCAGCAGTGGCCCTaGAAAACTCTGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDSQQWP*KTLEWV
Trigger: GACCCATTCCAGAGTTTTCCAGGGCCACTGCTGAGA...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGTCTCAGCAGTGGCCCTaGAAAACTCTGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARSQQWP*KTLEWV
Trigger: GACCCATTCCAGAGTTTTCCAGGGCCACTGCTGAGA...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMISLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAATGGAGGACATAGGCTaGGCTACTGCTGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: MRHSSLHCLLAAKCSGSSMEDIG*ATAATL
Trigger: CAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCAT...TGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR TCA 90 bp GGCCTCGCTGATGATTGCATATTGCAGGCGGTTCAGAACGAAGCCGGCCACCTCCCCAGCTTCGCCCAATaGCTCCACTGCCAACGATCA +
Preference number: 4 (lower is better)
Translates to: GLADDCILQAVQNEAGHLPSFAQ*LHCQRS
Trigger: TGATCGTTGGCAGTGGAGTCATTGGGCGAAGCTGGG...GAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACTCTGGAACACATTCCTaGATGTGCATGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHSGTHS*MCMAPS
Trigger: AGAGGGTGCCATGCACATTCAGGAATGTGTTCCAGA...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643750.1
ENST00000643887.1
ENST00000644167.1
CDS-3UTR TCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMITTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCHAQPF*HDKVQV
Trigger: GACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATG...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp AGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RAMIQSDGQTTGLHHPTQHAQPF*HDKVQV
Trigger: GACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATG...CTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCTTTCCAGGGGTCCAATaGATGCATACCGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTFPGVQ*MHTACP
Trigger: TGGGCATGCGGTATGCATTCATTGGACCCCTGGAAA...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp GGGGGACCAGCTCAACCAGCGGGATGTAGTATGGCGGATTCACAGGATGAGCCAACTTGGCGAGTCTCATaGGGCACTCGTCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GGPAQPAGCSMADSQDEPTWRVS*GTRPST
Trigger: AGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGT...TGGCTCATCCTGTGAATCCGCCATACTACATCCCGCTGGTTGAGCTGGTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp CGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RMGHCPIFFIRAWVLSTVPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...GACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCCCAGCTTCGCCCAATaGCTCCACTATGTTAATCTT +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMIPSFAQ*LHYVNL
Trigger: AAGATTAACATAGTGGAGTCATTGGGCGAAGCTGGG...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643750.1
CDS-3UTR GCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGTTCAGAGAACCTGCCTaGTCCAGCAACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQFREPA*SSNFIS
Trigger: GGAGATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAA...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACGCCTTTCAGAGAACCTaGCTGCTCCAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHAFQRT*LLQQLH
Trigger: ATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAAAGGC...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCGCCTTTCAGAGAACCTaGCTGCTCCAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPAFQRT*LLQQLH
Trigger: ATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAAAGGC...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCTTTCAGAGAACCTaGCTGCTCCAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQAFQRT*LLQQLH
Trigger: ATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAAAGGC...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGGCCTTTCAGAGAACCTaGCTGCTCCAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: RHSSLHCLLAAKCSGSSGAFQRT*LLQQLH
Trigger: ATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAAAGGC...CCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACGGCCTCGCTGATGATTaGATATTGCAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHGLADD*ILQAVQ
Trigger: CTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGGCCTCGCTGATGATTaGATATTGCAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PRERKCCCAARPRAMIQSGLADD*ILQAVQ
Trigger: CTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC...ACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGCCTTCTGCATTGAGATaGATGGTTTCCAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQPSALR*MVSRGP
Trigger: TGGACCCCTGGAAACCATGCATCTCAATGCAGAAGG...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCTTCTGCATTGAGATaGATGGTTTCCAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGPSALR*MVSRGP
Trigger: TGGACCCCTGGAAACCATGCATCTCAATGCAGAAGG...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: TQAAHKTASLGSPWAATYTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: GENLQVICPGGRKSTAPRTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...TCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMIQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GCAACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGGCGACATGCCTGGAAGCCTCCACTaGCAAACAGCATGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ATARSRVLCHLQPYEGDMPGSLH*QTAWPS
Trigger: GCTGGGCCATGCTGTTTGCCAGTGGAGGCTTCCAGG...CATGTCGCCCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCCCTCTACTGCTTCTTaGATATTGGGACAACCACTG +
Preference number: 4 (lower is better)
Translates to: GGRKSTAPRTQVLLCRQAPSTAS*ILGQPL
Trigger: CAGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGG...GGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCCCCTCTACTGCTTCTTaGATATTGGGACAACCACTG +
Preference number: 4 (lower is better)
Translates to: AQVAGNRQPRERKCCCAAPSTAS*ILGQPL
Trigger: CAGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGG...GGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACCAGCGGGATGTAGTATaGCGGATTCACAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHQRDVV*RIHRMS
Trigger: GCTCATCCTGTGAATCCGCCATACTACATCCCGCTG...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp CCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTCAGCGGGATGTAGTATaGCGGATTCACAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PRERKCCCAARPRAMIQSQRDVV*RIHRMS
Trigger: GCTCATCCTGTGAATCCGCCATACTACATCCCGCTG...ACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGTTCTTCATCAGGGCGTaGGTTCTGTCCACTGTCGTA +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARFFIRA*VLSTVV
Trigger: TACGACAGTGGACAGAACCCACGCCCTGATGAAGAA...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGTTCTTCATCAGGGCGTaGGTTCTGTCCACTGTCGTA +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQFFIRA*VLSTVV
Trigger: TACGACAGTGGACAGAACCCACGCCCTGATGAAGAA...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ACACCCACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCGGCCCAGGCCCCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: TPTLTNQETKNSISAAQAPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...GGCCTGGGCCGCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp TCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SGLAWGTVQSSSSGRGFCPSTAS*QLSAPG
Trigger: ACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...ACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp ACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: TQDSQLRISVGCYLCHRGPSTAS*QLSAPG
Trigger: ACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp AGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 4 (lower is better)
Translates to: RHSSLHCLLAAKCSGSSGSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...CCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CTTCATCAGGGCGTGGGTTCTGTCCACTGTCGTAGGGGCCGTCTCCGGGTGGGGTGGAACACATTCTTTTaGGCCTCTTCTTGCCATCGG +
Preference number: 4 (lower is better)
Translates to: LHQGVGSVHCRRGRLRVGWNTFF*ASSCHR
Trigger: CCGATGGCAAGAAGAGGCCCAAAAGAATGTGTTCCA...CCCCACCCGGAGACGGCCCCTACGACAGTGGACAGAACCCACGCCCTGATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCAGCGGGATGTAGTATaGCGGATTCACCTGAATGTG +
Preference number: 4 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHQRDVV*RIHLNV
Trigger: CACATTCAGGTGAATCCGCCATACTACATCCCGCTG...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644593.1
CDS-3UTR TCA 90 bp CGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCCCCAGCTTCGCCCAATaGCTCCACTGCCAACGATCA +
Preference number: 4 (lower is better)
Translates to: RMGHCPIFFIRAWVLSTVPSFAQ*LHCQRS
Trigger: TGATCGTTGGCAGTGGAGTCATTGGGCGAAGCTGGG...GACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGACTTCATCTCCTTTCTaGTGTTTTCCAGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARTSSPF*CFPGRS
Trigger: GGAACGCCCTGGAAAACATCAGAAAGGAGATGAAGT...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPTTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARTTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGTTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: YLPRWQEIDSPENASAAVGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp CGCCATGGAGGACATAGGCTGGGCTACTGCTGCGACCCTGACTCATTTCCCACAGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: RHGGHRLGYCCDPDSFPTGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...TGTGGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCATGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR TCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACTTGGCGAGTCTCATaGGGCACTCGTCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: QAAHKTASLGSPWAATYVTWRVS*GTRPST
Trigger: AGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGT...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCTGACTTGGCGAGTCTCATaGGGCACTCGTCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: QDSQLRISVGCYLCHRGLTWRVS*GTRPST
Trigger: AGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGT...CAGCCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCTATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp AGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGTATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: RHSSLHCLLAAKCSGSSGYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...CCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACTATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TQAAHKTASLGSPWAATYPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp ACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCGGCCCAGGCCCTAAGGCTCACACCAGCAGGCTaGGAACCTGCCGAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: TLTNQETKNSISAAQALRLTPAG*EPAEGC
Trigger: GCAACCCTCGGCAGGTTCTCAGCCTGCTGGTGTGAG...CCTTAGGGCCTGGGCCGCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR TCA 90 bp AGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGGAGGCACACGATATTTaGTGGATAAATCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RHSSLHCLLAAKCSGSSGEAHDI*WINPPP
Trigger: CGGAGGAGGATTTATCCATCAAATATCGTGTGCCTC...CCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGAAGCAATCTGACTCCTaGGTCCTTCCTCTTAACCAC +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQKQSDS*VLPLNH
Trigger: GTGGTTAAGAGGAAGGACTCAGGAGTCAGATTGCTT...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643750.1
CDS-3UTR GCA 90 bp CCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGCCTTTCAGAGAACCTaGCTGCTCCAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: PRERKCCCAARPRAMIQSAFQRT*LLQQLH
Trigger: ATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAAAGGC...ACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGCATGGCACCCTCTACTaGTTCTTGGATATTGGGACA +
Preference number: 4 (lower is better)
Translates to: PGGRKSTAPRTQVLLCRQHGTLY*FLDIGT
Trigger: TGTCCCAATATCCAAGAAGCAGTAGAGGGTGCCATG...CTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCATGGCACCCTCTACTaGTTCTTGGATATTGGGACA +
Preference number: 4 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDHGTLY*FLDIGT
Trigger: TGTCCCAATATCCAAGAAGCAGTAGAGGGTGCCATG...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCCATGGCACCCTCTACTaGTTCTTGGATATTGGGACA +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPHGTLY*FLDIGT
Trigger: TGTCCCAATATCCAAGAAGCAGTAGAGGGTGCCATG...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCATGGCACCCTCTACTaGTTCTTGGATATTGGGACA +
Preference number: 4 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHHGTLY*FLDIGT
Trigger: TGTCCCAATATCCAAGAAGCAGTAGAGGGTGCCATG...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMILMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGCAGGGGTCCAATGAATaGATACCGCATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: NLASLMRHSSLHCLLAAKQGSNE*IPHAQP
Trigger: GGGTTGGGCATGCGGTATGCATTCATTGGACCCCTG...CTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGC +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMIVGHVL*LRCICR
Trigger: GCGACAGATACAGCGAAGGCATAAAACATGTCCTAC...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCTCCTGGCAGCTAAGTaGTCCGGGTCATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: TQDSQLRISVGCYLCHRGLLAAK*SGSSGT
Trigger: GGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG...CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAACACTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: NLQVICPGGRKSTAPRTQHSSLH*LLAAKC
Trigger: GCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTG...TTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTAGGCAGACTACCGGCCTaGACCACCCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALGRLPA*TTPLRL
Trigger: CAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCC...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: GLAVFPNRASNERSGSCITQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGGCTGATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGACGCAAGTGCTGCTGTaGCGCCAGGCCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: GLIKGLQCSQIGPPMRGVTQVLL*RQAQGY
Trigger: ATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGT...CACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GAAAAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EKVKISRLSAQVAGNRQPRERKC*CAARPR
Trigger: CCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCG...GGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTACGAGAACGCAAGTGCTaGTGTGCCGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALRERKC*CAARPR
Trigger: CCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCG...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCACAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PRWQEIDSPENASAAVPPQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CGGCCTGTGCTTAGCAAGTCAAGTCAGAAGCCAGGGCCGGGATCCTGGAAGAGGCATAGGCTGGGCTACTaGTGCGACCCTGACTCATTT +
Preference number: 4 (lower is better)
Translates to: RPVLSKSSQKPGPGSWKRHRLGY*CDPDSF
Trigger: AAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATG...CCTCTTCCAGGATCCCGGCCCTGGCTTCTGACTTGACTTGCTAAGCACAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR CCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCCCCTCTACTGCTTCTTaGATATTGGGACAACCACTG +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPPSTAS*ILGQPL
Trigger: CAGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGG...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAACCCTCTACTGCTTCTTaGATATTGGGACAACCACTG +
Preference number: 4 (lower is better)
Translates to: QPRERKCCCAARPRAMIQPSTAS*ILGQPL
Trigger: CAGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGG...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCATTCCTGAATGTGCATaGCACCCTCTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMIIPECA*HPLLLL
Trigger: AAGAAGCAGTAGAGGGTGCCATGCACATTCAGGAAT...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643750.1
ENST00000643887.1
ENST00000644167.1
CDS-3UTR CCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCAGCGGGATGTAGTATaGCGGATTCACAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCQRDVV*RIHRMS
Trigger: GCTCATCCTGTGAATCCGCCATACTACATCCCGCTG...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp CCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTTTCTTCATCAGGGCGTaGGTTCTGTCCACTGTCGTA +
Preference number: 4 (lower is better)
Translates to: PRERKCCCAARPRAMIQSFFIRA*VLSTVV
Trigger: TACGACAGTGGACAGAACCCACGCCCTGATGAAGAA...ACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCTTCTTCATCAGGGCGTaGGTTCTGTCCACTGTCGTA +
Preference number: 4 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTFFIRA*VLSTVV
Trigger: TACGACAGTGGACAGAACCCACGCCCTGATGAAGAA...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp AAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGACCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: KVKISRLSAQVAGNRQPRPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...TCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTCCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GLAVFPNRASNERSGSCIPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GGTCCAATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGCCGGCCACCTCCTTCTaGACTCGCATGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GPMNAYRMPNPSDMTRSRPATSF*TRMGHC
Trigger: ACAGTGCCCCATGCGAGTCCAGAAGGAGGTGGCCGG...CCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCTTCATGCACATGTCCTaGTTAACCTTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RQPRERKCCCAARPRAMIFMHMS*LTFSAV
Trigger: CACTGCTGAGAAGGTTAACCAGGACATGTGCATGAA...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CACTGTCGTAGGGGCCGTCTCCGGGTGGGGGACCAGCTCAACCAGCGGGATGTATTCATGCACATGTCCTaGTTAACCTTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: HCRRGRLRVGDQLNQRDVFMHMS*LTFSAV
Trigger: CACTGCTGAGAAGGTTAACCAGGACATGTGCATGAA...TACATCCCGCTGGTTGAGCTGGTCCCCCACCCGGAGACGGCCCCTACGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GLAVFPNRASNERSGSCIPSTAS*QLSAPG
Trigger: ACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTTCATGCACATGTATCCAGTCTCTTTGGTaGAACGGGGGTGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: TASWQLSAPGHQGPSCTCIQSLW*NGGGVA
Trigger: GGCCACTCCACCCCCGTTCCACCAAAGAGACTGGAT...ACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTAATCCAGTCTCTTTGGTaGAACGGGGGTGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: HSGCTQDSQLRISVGCYLIQSLW*NGGGVA
Trigger: GGCCACTCCACCCCCGTTCCACCAAAGAGACTGGAT...TAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCCGGGATGTTAGGATTTaGGGGTCCAAGATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTRDVRI*GSKIQS
Trigger: AGACTGGATCTTGGACCCCCAAATCCTAACATCCCG...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCGTACTGAATGTGCATaGCACCCTCTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRRTECA*HPLLLL
Trigger: AAGAAGCAGTAGAGGGTGCCATGCACATTCAGTACG...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644153.1
3UTR CAA 72 bp CCAACTCACACCAGCAGGCTGAGAACCTGCCGAGGGTaGCAGATTCATTCCCAGGCACCTCCACATACCCTG +
Preference number: 4 (lower is better)
Translates to: PTHTSRLRTCRG*QIHSQAPPHTL
Trigger: CAGGGTATGTGGAGGTGCCTGGGAATGAATCTGCAACCCTCGGCAGGTTCTCAGCCTGCTGGTGTGAGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR TCA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCACTTCATCTCCTTTCTaGTGTTTTCCAGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTTSSPF*CFPGRS
Trigger: GGAACGCCCTGGAAAACATCAGAAAGGAGATGAAGT...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CCAACTCACACCAGCAGGCTGAGAACCTGCCGAGGGTTGCAGATTCATTCCCAGGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: PTHTSRLRTCRGLQIHSQGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...CTGGGAATGAATCTGCAACCCTCGGCAGGTTCTCAGCCTGCTGGTGTGAGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR TCA 90 bp ACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGGCGACATGAAGACTTGGCGAGTCTCATaGGGCACTCGTCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: TARSRVLCHLQPYEGDMKTWRVS*GTRPST
Trigger: AGTGGAGGGACGAGTGCCTCATGAGACTCGCCAAGT...CTTCATGTCGCCCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTACACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: HSGCTQDSQLRISVGCYLHWGCT*LFNLAS
Trigger: ACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTG...TAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTGGCTATGATCCAAAGTaGCGGGCAGACTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCGYDPK*RADYRP
Trigger: AGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCC...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCTGGGGCTGGGGGAAATaGGCAGCTGTTGTTCAATGG +
Preference number: 4 (lower is better)
Translates to: QAAHKTASLGSPWAATYVWGWGK*AAVVQW
Trigger: CCATTGAACAACAGCTGCTCATTTCCCCCAGCCCCA...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382812.5
CDS-3UTR TCA 90 bp ACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCGGCCCAGGCCCTAAGGGCCAATAAGATCACGTaGCCCAGGGAGCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: TLTNQETKNSISAAQALRANKIT*PREHAS
Trigger: GGAGGCGTGCTCCCTGGGTCACGTGATCTTATTGGC...CCTTAGGGCCTGGGCCGCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR TCA 90 bp ACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTTCATGCACATGTCCTACGAGGGCGACATaGAGAAAGCACTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TASWQLSAPGHQGPSCTCPTRAT*RKHWAC
Trigger: ACAAGCCCAGTGCTTTCTTCATGTCGCCCTCGTAGG...ACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGATAAATCCTCCTCCGTaGCTATCTCCTCTACTGATC +
Preference number: 4 (lower is better)
Translates to: QVAGNRQPRERKCCCAARINPPP*LSPLLI
Trigger: GATCAGTAGAGGAGATAGTCACGGAGGAGGATTTAT...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCATAAATCCTCCTCCGTaGCTATCTCCTCTACTGATC +
Preference number: 4 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPINPPP*LSPLLI
Trigger: GATCAGTAGAGGAGATAGTCACGGAGGAGGATTTAT...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp AGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCCTTTCAGAGAACCTaGCTGCTCCAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: RAMIQSDGQTTGLHHPTQAFQRT*LLQQLH
Trigger: ATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAAAGGC...CTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTCTGATGAGTGACAGCTaGTCTTCCACACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGYLPRWQEIDSPENASALMSDS*SSTLRE
Trigger: CTCCCTGAGTGTGGAAGAGCAGCTGTCACTCATCAG...AGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCATGGCACCCTCTACTaGTTCTTGGATATTGGGACA +
Preference number: 4 (lower is better)
Translates to: ERKCCCAARPRAMIQSDGHGTLY*FLDIGT
Trigger: TGTCCCAATATCCAAGAAGCAGTAGAGGGTGCCATG...CCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCACAGGATGAGCCACGATaGATTGCTTCACATGGACCA +
Preference number: 4 (lower is better)
Translates to: MRHSSLHCLLAAKCSGSSQDEPR*IASHGP
Trigger: TGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTG...TGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCAGGATGAGCCACGATaGATTGCTTCACATGGACCA +
Preference number: 4 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCQDEPR*IASHGP
Trigger: TGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTG...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDLMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTTCATGCACATGTCCTGGGGCCTCGCTGATGATTaGATATTGCAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLAAKCSGSSGTFMHMSWGLADD*ILQAVQ
Trigger: CTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC...CCAGGACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGCAGGGGTCCAATGAATaGATACCGCATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKQGSNE*IPHAQP
Trigger: GGGTTGGGCATGCGGTATGCATTCATTGGACCCCTG...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGCCTTCTGCATTGAGATaGATGGTTTCCAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RAMIQSDGQTTGLHHPTQPSALR*MVSRGP
Trigger: TGGACCCCTGGAAACCATGCATCTCAATGCAGAAGG...CTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGC +
Preference number: 4 (lower is better)
Translates to: QPRERKCCCAARPRAMIQVGHVL*LRCICR
Trigger: GCGACAGATACAGCGAAGGCATAAAACATGTCCTAC...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGC +
Preference number: 4 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHVGHVL*LRCICR
Trigger: GCGACAGATACAGCGAAGGCATAAAACATGTCCTAC...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGGCTGCACTTGACTCTTCAACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCAGCTGGTGCCGGCCTGTaGTTAGCAAGTCAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GLHLTLQLGESHEALVPPAGAGL*LASQVR
Trigger: TCTGACTTGACTTGCTAAGCACAGGCCGGCACCAGC...TGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR CCA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAATTCCTGAATGTGCATaGCACCCTCTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PRWQEIDSPENASAAVPPIPECA*HPLLLL
Trigger: AAGAAGCAGTAGAGGGTGCCATGCACATTCAGGAAT...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643750.1
ENST00000643887.1
ENST00000644167.1
CDS-3UTR CCA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATATTCCTGAATGTGCATaGCACCCTCTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDIPECA*HPLLLL
Trigger: AAGAAGCAGTAGAGGGTGCCATGCACATTCAGGAAT...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643750.1
ENST00000643887.1
ENST00000644167.1
CDS-3UTR CCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCATTCCTGAATGTGCATaGCACCCTCTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGIPECA*HPLLLL
Trigger: AAGAAGCAGTAGAGGGTGCCATGCACATTCAGGAAT...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643750.1
ENST00000643887.1
ENST00000644167.1
CDS-3UTR CCA 90 bp CCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTTCTCAGCAGTGGCCCTaGAAAACTCTGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: PGYLPRWQEIDSPENASASQQWP*KTLEWV
Trigger: GACCCATTCCAGAGTTTTCCAGGGCCACTGCTGAGA...AGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GTGCTCCGGGTCATCAGGGACCTTCATGCACATGTCCTGGTTAACCTTCTCAGCGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: VLRVIRDLHAHVLVNLLSGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...GCTGAGAAGGTTAACCAGGACATGTGCATGAAGGTCCCTGATGACCCGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp ACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTGTCTCTGAATGTGCATaGCACCCTCTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TRPSTASWQLSAPGHQGPVSECA*HPLLLL
Trigger: AAGAAGCAGTAGAGGGTGCCATGCACATTCAGAGAC...AGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643035.1
CDS-3UTR TCA 90 bp CCGGGTGGGGGACCAGCTCAACCAGCGGGATGTAGTATGGCGGATTCACAGGATACTTCATCTCCTTTCTaGTGTTTTCCAGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: PGGGPAQPAGCSMADSQDTSSPF*CFPGRS
Trigger: GGAACGCCCTGGAAAACATCAGAAAGGAGATGAAGT...ATCCTGTGAATCCGCCATACTACATCCCGCTGGTTGAGCTGGTCCCCCACCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGTCTGGAACACATTCCTaGATGTGCATGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: YLPRWQEIDSPENASAAVSGTHS*MCMAPS
Trigger: AGAGGGTGCCATGCACATTCAGGAATGTGTTCCAGA...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643750.1
ENST00000643887.1
ENST00000644167.1
CDS-3UTR TCA 90 bp GCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCTCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: AQVAGNRQPRERKCCCAASLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...GGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp GGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCTCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: GGRKSTAPRTQVLLCRQASLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...GGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp TCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGLAWGTVQSSSSGRGFCGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...ACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATCATGCCCAACCCTTCTaGCATGACAAGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TQAAHKTASLGSPWAATYHAQPF*HDKVQV
Trigger: GACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATG...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CCACCTCCTTCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTTTTCCAGGGGTCCAATaGATGCATACCGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: PPPSGLAWGTVQSSSSGRFPGVQ*MHTACP
Trigger: TGGGCATGCGGTATGCATTCATTGGACCCCTGGAAA...ACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp AATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAACACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: NLQVICPGGRKSTAPRTQHWGCT*LFNLAS
Trigger: ACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTG...TTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CACCCCAGGGCAGCGGCCAAGAAGAAAGGATTACACCAGCACGTCCATCTCAATCACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: HPRAAAKKKGLHQHVHLNHWGCT*LFNLAS
Trigger: ACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTG...ATTGAGATGGACGTGCTGGTGTAATCCTTTCTTCTTGGCCGCTGCCCTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644153.1
CDS-3UTR TCA 90 bp ATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCATATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: MRHSSLHCLLAAKCSGSSYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...TGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCGAGGCACACGATATTTaGTGGATAAATCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCEAHDI*WINPPP
Trigger: CGGAGGAGGATTTATCCATCAAATATCGTGTGCCTC...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTATGGCGGATTCACCTaGATGTGCATGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKYGGFT*MCMAPS
Trigger: AGAGGGTGCCATGCACATTCAGGTGAATCCGCCATA...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTTTCAGAGAACCTGCCTaGTCCAGCAACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PGYLPRWQEIDSPENASAFREPA*SSNFIS
Trigger: GGAGATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAA...AGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGGCCTTTCAGAGAACCTaGCTGCTCCAGCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: VICPGGRKSTAPRTQVLLAFQRT*LLQQLH
Trigger: ATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAAAGGC...CAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGCAGGATGAGCCACGATaGATTGCTTCACATGGACCA +
Preference number: 4 (lower is better)
Translates to: VICPGGRKSTAPRTQVLLQDEPR*IASHGP
Trigger: TGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTG...CAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHLMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGGGCCTCGCTGATGATTaGATATTGCAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKGLADD*ILQAVQ
Trigger: CTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTTCATGCACATGTGGCCTCGCTGATGATTaGATATTGCAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: TASWQLSAPGHQGPSCTCGLADD*ILQAVQ
Trigger: CTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC...ACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATCAGGGGTCCAATGAATaGATACCGCATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: TQAAHKTASLGSPWAATYQGSNE*IPHAQP
Trigger: GGGTTGGGCATGCGGTATGCATTCATTGGACCCCTG...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AAAGAAACGCAACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGCACTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: KETQQREVEYSATFSPTRHSSLH*LLAAKC
Trigger: GCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTG...CCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGTTGCGTTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ICPGGRKSTAPRTQVLLCQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...GCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTCCACTACACTCCAACTaGTGTTTCAGACTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PGYLPRWQEIDSPENASAPLHSN*CFRLPA
Trigger: GGCAGGAAGTCTGAAACAGCAGTTGGAGTGTAGTGG...AGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643750.1
CDS-3UTR CCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGCAGCGGGATGTAGTATaGCGGATTCACAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKQRDVV*RIHRMS
Trigger: GCTCATCCTGTGAATCCGCCATACTACATCCCGCTG...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGTTCTTCATCAGGGCGTaGGTTCTGTCCACTGTCGTA +
Preference number: 4 (lower is better)
Translates to: YLPRWQEIDSPENASAAVFFIRA*VLSTVV
Trigger: TACGACAGTGGACAGAACCCACGCCCTGATGAAGAA...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CCAACTCACACCAGCAGGCTGAGAACCTGCCGAGGGTTGCAGATTCATTCCCAGCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: PTHTSRLRTCRGLQIHSQPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...CTGGGAATGAATCTGCAACCCTCGGCAGGTTCTCAGCCTGCTGGTGTGAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp CAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCTGAAGATCCAGTCTCTTTaGTGGAACGGGGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QDSQLRISVGCYLCHRGLKIQSL*WNGGGV
Trigger: CACTCCACCCCCGTTCCACCAAAGAGACTGGATCTT...CAGCCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTAAAGATCCAGTCTCTTTaGTGGAACGGGGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: HSGCTQDSQLRISVGCYLKIQSL*WNGGGV
Trigger: CACTCCACCCCCGTTCCACCAAAGAGACTGGATCTT...TAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp GTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGACTTCATCTCCTTTCTaGTGTTTTCCAGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: VICPGGRKSTAPRTQVLLTSSPF*CFPGRS
Trigger: GGAACGCCCTGGAAAACATCAGAAAGGAGATGAAGT...CAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTTTTCCAGGGGTCCAATaGATGCATACCGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCFPGVQ*MHTACP
Trigger: TGGGCATGCGGTATGCATTCATTGGACCCCTGGAAA...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp GATGTAGTATGGCGGATTCACAGGATGAGCCACGATGCATTGCTTCACATGGACCCAGGCCCAGGGCTATaGTCCAAAGTGACGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DVVWRIHRMSHDALLHMDPGPGL*SKVTGR
Trigger: TCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGG...GTCCATGTGAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCCATACTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTTCAGAGAACCTGCCTaGTCCAGCAACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKFREPA*SSNFIS
Trigger: GGAGATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAA...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp AGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCGACAAGAAGTGGAACTaGTTAAGATCACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: RWQEIDSPENASAAVPPGDKKWN*LRSLDH
Trigger: ATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTC...GCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGACAAGAAGTGGAACTaGTTAAGATCACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: PRWQEIDSPENASAAVPPDKKWN*LRSLDH
Trigger: ATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTC...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCGACAAGAAGTGGAACTaGTTAAGATCACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRDKKWN*LRSLDH
Trigger: ATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTC...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp ACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGGGCCTCGCTGATGATTaGATATTGCAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: TQDSQLRISVGCYLCHRGGLADD*ILQAVQ
Trigger: CTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC...CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGGCTGATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGCAGGGGTCCAATGAATaGATACCGCATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: GLIKGLQCSQIGPPMRGVQGSNE*IPHAQP
Trigger: GGGTTGGGCATGCGGTATGCATTCATTGGACCCCTG...CACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCTGCCTTCTGCATTGAGATaGATGGTTTCCAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QDSQLRISVGCYLCHRGLPSALR*MVSRGP
Trigger: TGGACCCCTGGAAACCATGCATCTCAATGCAGAAGG...CAGCCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTAGGATCTCCGTGGGCTaGTACCTATGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: GLAVFPNRASNERSGSCIRISVG*YLCHRG
Trigger: CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCT...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTACCACCCCACTCAGGCTaGACACAAGACAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALPPHSG*TQDSQL
Trigger: AAGCTGGCTGTCTTGTGTGCAGCCTGAGTGGGGTGG...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: YLPRWQEIDSPENASAAVQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGGGGACCAGCTCAACCAGCGGGATGTAGTATGGCGGATTCACAGGATGAGCCAGCAGGAACACAGACTTaGTACCCAGGAATTTGGATG +
Preference number: 4 (lower is better)
Translates to: GGPAQPAGCSMADSQDEPAGTQT*YPGIWM
Trigger: CATCCAAATTCCTGGGTAGCAAGTCTGTGTTCCTGC...TGGCTCATCCTGTGAATCCGCCATACTACATCCCGCTGGTTGAGCTGGTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644153.1
CDS-3UTR GCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCGGTCAGTCCGCCTTCTaGATTGAGATGCATGGTTTC +
Preference number: 4 (lower is better)
Translates to: QAAHKTASLGSPWAATYVGQSAF*IEMHGF
Trigger: GAAACCATGCATCTCAATGCAGAAGGCGGACTGACC...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR CCA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGTCTCAGCAGTGGCCCTaGAAAACTCTGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: TQDSQLRISVGCYLCHRGSQQWP*KTLEWV
Trigger: GACCCATTCCAGAGTTTTCCAGGGCCACTGCTGAGA...CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTAGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
3UTR CAA 72 bp AGCACGCCTCCGGCAGGGGAAGTAAGTGTCAGTAGATaGTGGCCAGACATGTCCATCTGGCATTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: STPPAGEVSVSR*WPDMSIWHFQD
Trigger: GTCTTGGAAATGCCAGATGGACATGTCTGGCCACAATCTACTGACACTTACTTCCCCTGCCGGAGGCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR TCA 90 bp ACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTTCATGCACATGTACTTCATCTCCTTTCTaGTGTTTTCCAGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: TASWQLSAPGHQGPSCTCTSSPF*CFPGRS
Trigger: GGAACGCCCTGGAAAACATCAGAAAGGAGATGAAGT...ACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp GAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGTCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: ERKCCCAARPRAMIQSDGSLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...CCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: QAAHKTASLGSPWAATYVTTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp GCCCCAGACCACACCCACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCAGTCCAGCACAGGGATaGCATCATTCCGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: APDHTHPDKSRDQELNLCSPAQG*HHSEGQ
Trigger: CTGTCCTTCGGAATGATGTCATCCCTGTGCTGGACT...GCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGTGGGTGTGGTCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR TCA 90 bp CAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAAGTCCACTGTCAACTaGGAAACAGGAGAAAAATTA +
Preference number: 4 (lower is better)
Translates to: QPRERKCCCAARPRAMIQKSTVN*ETGEKL
Trigger: TAATTTTTCTCCTGTTTCTCAGTTGACAGTGGACTT...TTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp GGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGACTACTGCTGCGACCCTaGCTCATTTCCCACATCTTT +
Preference number: 4 (lower is better)
Translates to: GENLQVICPGGRKSTAPRLLLRP*LISHIF
Trigger: AAAGATGTGGGAAATGAGTCAGGGTCGCAGCAGTAG...TCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR GCA 90 bp GGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGATTCAGAGAACCTGCCTaGTCCAGCAACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: GENLQVICPGGRKSTAPRFREPA*SSNFIS
Trigger: GGAGATGAAGTTGCTGGAGCAGGCAGGTTCTCTGAA...TCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTACATGGCACCCTCTACTaGTTCTTGGATATTGGGACA +
Preference number: 4 (lower is better)
Translates to: HSGCTQDSQLRISVGCYLHGTLY*FLDIGT
Trigger: TGTCCCAATATCCAAGAAGCAGTAGAGGGTGCCATG...TAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp ATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGCTGCACACGACAAGAAGTGGAACTaGTTAAGATCACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: IQSDGQTTGLHHPTQAAHDKKWN*LRSLDH
Trigger: ATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTC...GTGTGCAGCCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCAGGATGAGCCACGATaGATTGCTTCACATGGACCA +
Preference number: 4 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCQDEPR*IASHGP
Trigger: TGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTG...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp CACCCCAGGGCAGCGGCCAAGAAGAAAGGATTACACCAGCACGTCCATCTCAATCAGGATGAGCCACGATaGATTGCTTCACATGGACCA +
Preference number: 4 (lower is better)
Translates to: HPRAAAKKKGLHQHVHLNQDEPR*IASHGP
Trigger: TGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTG...ATTGAGATGGACGTGCTGGTGTAATCCTTTCTTCTTGGCCGCTGCCCTGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644153.1
CDS-3UTR GCA 90 bp CCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: PGYLPRWQEIDSPENASALMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...AGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGTCCAATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGGGCCTCGCTGATGATTaGATATTGCAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GPMNAYRMPNPSDMTRSRGLADD*ILQAVQ
Trigger: CTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC...CCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GCCTCGCTGATGATTGCATATTGCAGGCGGTTCAGAACGAAGCCGGCCACCTCCGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGC +
Preference number: 4 (lower is better)
Translates to: ASLMIAYCRRFRTKPATSVGHVL*LRCICR
Trigger: GCGACAGATACAGCGAAGGCATAAAACATGTCCTAC...GGAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGC +
Preference number: 4 (lower is better)
Translates to: VICPGGRKSTAPRTQVLLVGHVL*LRCICR
Trigger: GCGACAGATACAGCGAAGGCATAAAACATGTCCTAC...CAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGGATGACATCATTCCGAAGGACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGCAAGAACTCAATCTCTaGGGCCCAGGCCCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: GMTSFRRTGRTQGQQFPKQELNL*GPGPKD
Trigger: GTCCTTAGGGCCTGGGCCGCAGAGATTGAGTTCTTG...CTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTCCTTCGGAATGATGTCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR GCA 90 bp GCAACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGGCGACATGGCAGGAACACAGACTTaGTACCCAGGAATTTGGATG +
Preference number: 4 (lower is better)
Translates to: ATARSRVLCHLQPYEGDMAGTQT*YPGIWM
Trigger: CATCCAAATTCCTGGGTAGCAAGTCTGTGTTCCTGC...CATGTCGCCCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp CTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCGTAGGGGCCGTCCCTCTACTGCTTCTTaGATATTGGGACAACCACTG +
Preference number: 4 (lower is better)
Translates to: LSNLLHQGVGSVHCRRGRPSTAS*ILGQPL
Trigger: CAGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGG...ACGGCCCCTACGACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GGGCTGATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGTCTCAGCAGTGGCCCTaGAAAACTCTGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: GLIKGLQCSQIGPPMRGVSQQWP*KTLEWV
Trigger: GACCCATTCCAGAGTTTTCCAGGGCCACTGCTGAGA...CACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTTTCATGCACATGTCCTaGTTAACCTTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PGYLPRWQEIDSPENASAFMHMS*LTFSAV
Trigger: CACTGCTGAGAAGGTTAACCAGGACATGTGCATGAA...AGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CTCCTGGCAGCTAAGTGCTCCGGGTCATCAGGGACCTTCATGCACATGTCCTGGTTCATGCACATGTCCTaGTTAACCTTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLAAKCSGSSGTFMHMSWFMHMS*LTFSAV
Trigger: CACTGCTGAGAAGGTTAACCAGGACATGTGCATGAA...CCAGGACATGTGCATGAAGGTCCCTGATGACCCGGAGCACTTAGCTGCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp GGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 4 (lower is better)
Translates to: GENLQVICPGGRKSTAPRSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...TCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGGTTATCTGCCCAGGTaGCAGGAAATCGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: IKGLQCSQIGPPMRGVEAGYLPR*QEIDSP
Trigger: GGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACC...AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTAGAAAGCTAGAAGGGTaGATGCCAGGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: IKGLQCSQIGPPMRGVEARKLEG*MPGAGA
Trigger: AGCCCCAGCCCCTGGCATCCACCCTTCTAGCTTTCT...AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382812.5
CDS-3UTR CCA 90 bp CCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTTGCTACCCAGGAATTTaGATGAGGTTCTATTCAAGT +
Preference number: 4 (lower is better)
Translates to: PRERKCCCAARPRAMIQSCYPGI*MRFYSS
Trigger: ACTTGAATAGAACCTCATCCAAATTCCTGGGTAGCA...ACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
3UTR CAA 72 bp GGCTGCTACCTATGTCACAGAGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GCYLCHRGLIKG*QCSQIGPPMRG
Trigger: TCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCCTCTGTGACATAGGTAGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp GGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACTTCATCTCCTTTCTaGTGTTTTCCAGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: GENLQVICPGGRKSTAPRTSSPF*CFPGRS
Trigger: GGAACGCCCTGGAAAACATCAGAAAGGAGATGAAGT...TCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp GCCCCAGACCACACCCACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCTCTGGAACACATTCCTaGATGTGCATGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: APDHTHPDKSRDQELNLCSGTHS*MCMAPS
Trigger: AGAGGGTGCCATGCACATTCAGGAATGTGTTCCAGA...GCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGTGGGTGTGGTCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR TCA 90 bp ATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGGCGGATTCACAGGATaGGCCACGATGCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: IKGLQCSQIGPPMRGVEAGGFTG*ATMHCF
Trigger: GAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCC...AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp TTCTGCATTGAGATGCATGGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCCACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: FCIEMHGFQGSNECIPHAHWGCT*LFNLAS
Trigger: ACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTG...GGCATGCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp TGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACTCTCCCTCACATTCCTCCCACTGGGGCTGCACTTaGCTCTTCAACTTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: CLRCICRSSLTYSPSHSSHWGCT*LFNLAS
Trigger: ACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTG...GGAGGAATGTGAGGGAGAGTATGTTAAGCTACTGCGACAGATACAGCGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR TCA 90 bp CCGGCAGGGGAAGTAAGTGTCAGTAGATTGTGGCCAGACATGTCCATCTGGCATAGACCACACCCACCCTaGCAAATCAAGAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: PAGEVSVSRLWPDMSIWHRPHPP*QIKRPR
Trigger: TCTTGGTCTCTTGATTTGTCAGGGTGGGTGTGGTCT...ATGCCAGATGGACATGTCTGGCCACAATCTACTGACACTTACTTCCCCTGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR GCA 90 bp ACACCCACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCGGCCCAGGCCCATGGCACCCTCTACTaGTTCTTGGATATTGGGACA +
Preference number: 4 (lower is better)
Translates to: TPTLTNQETKNSISAAQAHGTLY*FLDIGT
Trigger: TGTCCCAATATCCAAGAAGCAGTAGAGGGTGCCATG...GGCCTGGGCCGCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGTGGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR GCA 90 bp ACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGGCGACATGAAGCATGGCACCCTCTACTaGTTCTTGGATATTGGGACA +
Preference number: 4 (lower is better)
Translates to: TARSRVLCHLQPYEGDMKHGTLY*FLDIGT
Trigger: TGTCCCAATATCCAAGAAGCAGTAGAGGGTGCCATG...CTTCATGTCGCCCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GAGGACATAGGCTGGGCTACTGCTGCGACCCTGACTCATTTCCCACATCTTTCACAGGATGAGCCACGATaGATTGCTTCACATGGACCA +
Preference number: 4 (lower is better)
Translates to: EDIGWATAATLTHFPHLSQDEPR*IASHGP
Trigger: TGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTG...TGAAAGATGTGGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR GCA 90 bp TCCACTAGCCGCCAGGCCTCGCTGATGATTGCATATTGCAGGCGGTTCAGAACGCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: STSRQASLMIAYCRRFRTLMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...CGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCCTGGCGGCTAGTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp ATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTCAGGGGTCCAATGAATaGATACCGCATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: IKGLQCSQIGPPMRGVEAQGSNE*IPHAQP
Trigger: GGGTTGGGCATGCGGTATGCATTCATTGGACCCCTG...AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTCCTTCTGCATTGAGATaGATGGTTTCCAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GLAVFPNRASNERSGSCIPSALR*MVSRGP
Trigger: TGGACCCCTGGAAACCATGCATCTCAATGCAGAAGG...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp GTCCAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCCACTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: VQKSVGHVLCLRCICRSSHSSLH*LLAAKC
Trigger: GCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTG...GCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp TCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCAAAATGAAGGTAGGTaGCTCATAAATGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SGLAWGTVQSSSSGRGFCQNEGR*LINAGP
Trigger: GGGCCCTGCATTTATGAGGCACCTACCTTCATTTTG...ACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp ACCCACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCGGCCCAGGCCCTCACCTCCACATACCCTaGCCTCATGGGAAAGAATTT +
Preference number: 4 (lower is better)
Translates to: THPDKSRDQELNLCGPGPHLHIP*PHGKEF
Trigger: AAATTCTTTCCCATGAGGGCAGGGTATGTGGAGGTG...AGGGCCTGGGCCGCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR GCA 90 bp CGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCTTTTGGGCCTCTTCTTaGCATCGGGATGTTAGGATT +
Preference number: 4 (lower is better)
Translates to: RMGHCPIFFIRAWVLSTVFWASS*HRDVRI
Trigger: AATCCTAACATCCCGATGGCAAGAAGAGGCCCAAAA...GACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp CCAACTCACACCAGCAGGCTGAGAACCTGCCGAGGGTTGCAGATTCATTCCCAGATTCCTGAATGTGCATaGCACCCTCTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PTHTSRLRTCRGLQIHSQIPECA*HPLLLL
Trigger: AAGAAGCAGTAGAGGGTGCCATGCACATTCAGGAAT...CTGGGAATGAATCTGCAACCCTCGGCAGGTTCTCAGCCTGCTGGTGTGAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp GAAAAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: EKVKISRLSAQVAGNRQPPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...GGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR CCA 90 bp TCCACTAGCCGCCAGGCCTCGCTGATGATTGCATATTGCAGGCGGTTCAGAACGTTCATGCACATGTCCTaGTTAACCTTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: STSRQASLMIAYCRRFRTFMHMS*LTFSAV
Trigger: CACTGCTGAGAAGGTTAACCAGGACATGTGCATGAA...CGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCCTGGCGGCTAGTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGCAGCTGTTGTTCAATaGGTACAGAGTTTTAATTCT +
Preference number: 4 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTAAVVQ*VQSFNS
Trigger: AGAATTAAAACTCTGTACCCATTGAACAACAGCTGC...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382812.5
CDS-3UTR CCA 90 bp AGTGGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTTGACTCTTCAACTTAGCACTGGGCTTGTGTaGATCACCCCAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SGSCITRNSLGLHLTLQLSTGLV*ITPGQR
Trigger: CCGCTGCCCTGGGGTGATCCACACAAGCCCAGTGCT...AAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp AAAGAAACGCAACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGACACGATTCCTTCTCTaGTCCTTCGGACAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KETQQREVEYSATFSPTRTRFLL*SFGQSQ
Trigger: CTGGGACTGTCCGAAGGACCAGAGAAGGAATCGTGT...CCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGTTGCGTTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp GGGCTGATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGACTTCATCTCCTTTCTaGTGTTTTCCAGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: GLIKGLQCSQIGPPMRGVTSSPF*CFPGRS
Trigger: GGAACGCCCTGGAAAACATCAGAAAGGAGATGAAGT...CACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR TCA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTATCTGGAACACATTCCTaGATGTGCATGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALSGTHS*MCMAPS
Trigger: AGAGGGTGCCATGCACATTCAGGAATGTGTTCCAGA...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643750.1
ENST00000643887.1
ENST00000644167.1
CDS-3UTR TCA 90 bp GGGGGACCAGCTCAACCAGCGGGATGTAGTATGGCGGATTCACAGGATGAGCCATCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: GGPAQPAGCSMADSQDEPSLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...TGGCTCATCCTGTGAATCCGCCATACTACATCCCGCTGGTTGAGCTGGTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp CCGGCAGGGGAAGTAAGTGTCAGTAGATTGTGGCCAGACATGTCCATCTGGCATACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: PAGEVSVSRLWPDMSIWHTTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...ATGCCAGATGGACATGTCTGGCCACAATCTACTGACACTTACTTCCCCTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR TCA 90 bp GGTCCAATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGTATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: GPMNAYRMPNPSDMTRSRYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...CCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GATGTAGTATGGCGGATTCACAGGATGAGCCACGATGCATTGCTTCACATGGACCTGATGAGTGACAGCTaGTCTTCCACACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DVVWRIHRMSHDALLHMDLMSDS*SSTLRE
Trigger: CTCCCTGAGTGTGGAAGAGCAGCTGTCACTCATCAG...GTCCATGTGAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCCATACTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp AGAACCTGCCGAGGGTTGCAGATTCATTCCCAGGCACCTCCACATACCCTGCCCGACAAGAAGTGGAACTaGTTAAGATCACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: RTCRGLQIHSQAPPHTLPDKKWN*LRSLDH
Trigger: ATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTC...GGGCAGGGTATGTGGAGGTGCCTGGGAATGAATCTGCAACCCTCGGCAGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR GCA 90 bp TCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGC +
Preference number: 4 (lower is better)
Translates to: SGLAWGTVQSSSSGRGFCVGHVL*LRCICR
Trigger: GCGACAGATACAGCGAAGGCATAAAACATGTCCTAC...ACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGC +
Preference number: 4 (lower is better)
Translates to: TQAAHKTASLGSPWAATYVGHVL*LRCICR
Trigger: GCGACAGATACAGCGAAGGCATAAAACATGTCCTAC...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR GCA 90 bp CAGCTCAACCAGCGGGATGTAGTATGGCGGATTCACAGGATGAGCCACGATGCATTTTGGGCCTCTTCTTaGCATCGGGATGTTAGGATT +
Preference number: 4 (lower is better)
Translates to: QLNQRDVVWRIHRMSHDAFWASS*HRDVRI
Trigger: AATCCTAACATCCCGATGGCAAGAAGAGGCCCAAAA...TGCATCGTGGCTCATCCTGTGAATCCGCCATACTACATCCCGCTGGTTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GGGCTGATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGCCCTCTACTGCTTCTTaGATATTGGGACAACCACTG +
Preference number: 4 (lower is better)
Translates to: GLIKGLQCSQIGPPMRGVPSTAS*ILGQPL
Trigger: CAGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGG...CACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTATTCCTGAATGTGCATaGCACCCTCTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCIPECA*HPLLLL
Trigger: AAGAAGCAGTAGAGGGTGCCATGCACATTCAGGAAT...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643750.1
ENST00000643887.1
ENST00000644167.1
CDS-3UTR CCA 90 bp CATCATTCCGAAGGACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGCTCATCACAGCGGGATGTAGTATaGCGGATTCACAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: HHSEGQAEPKVSNFRSSSQRDVV*RIHRMS
Trigger: GCTCATCCTGTGAATCCGCCATACTACATCCCGCTG...TGATGAGCTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTCCTTCGGAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp TCCTCCTCCGTGACTATCTCCTCTACTGATCACCAGCTACACCGAACCATCTTTCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSVTISSTDHQLHRTIFPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...AAAGATGGTTCGGTGTAGCTGGTGATCAGTAGAGGAGATAGTCACGGAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp TCCTCCTCCGTGACTATCTCCTCTACTGATCACCAGCTACACCGAACCATCTTTTCTCAGCAGTGGCCCTaGAAAACTCTGGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: SSSVTISSTDHQLHRTIFSQQWP*KTLEWV
Trigger: GACCCATTCCAGAGTTTTCCAGGGCCACTGCTGAGA...AAAGATGGTTCGGTGTAGCTGGTGATCAGTAGAGGAGATAGTCACGGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTAAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 4 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGCTCATCACCACCAACTCACACCAGACATGTCCATCTaGCATTTCCAAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: DRQNPRSAISEAHHHQLTPDMSI*HFQDHR
Trigger: CCTGTGGTCTTGGAAATGCCAGATGGACATGTCTGG...TGTGAGTTGGTGGTGATGAGCTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp CCGGCAGGGGAAGTAAGTGTCAGTAGATTGTGGCCAGACATGTCCATCTGGCATAGTGTCAGTAGATTGTaGCCAGACATGTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PAGEVSVSRLWPDMSIWHSVSRL*PDMSIW
Trigger: CCAGATGGACATGTCTGGCCACAATCTACTGACACT...ATGCCAGATGGACATGTCTGGCCACAATCTACTGACACTTACTTCCCCTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTTCACCTGAATGTGCATaGCACCCTCTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLAVFPNRASNERSGSCISPECA*HPLLLL
Trigger: AAGAAGCAGTAGAGGGTGCCATGCACATTCAGGTGA...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644593.1
CDS-3UTR TCA 90 bp GTTTCCAGGGGTCCAATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAACTTCATCTCCTTTCTaGTGTTTTCCAGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: VSRGPMNAYRMPNPSDMTTSSPF*CFPGRS
Trigger: GGAACGCCCTGGAAAACATCAGAAAGGAGATGAAGT...TGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACCCCTGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp TTCTGCATTGAGATGCATGGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCTCTGGAACACATTCCTaGATGTGCATGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: FCIEMHGFQGSNECIPHASGTHS*MCMAPS
Trigger: AGAGGGTGCCATGCACATTCAGGAATGTGTTCCAGA...GGCATGCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643887.1
CDS-3UTR TCA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: HSGCTQDSQLRISVGCYLSLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...TAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKSLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp CAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCTGTCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: QDSQLRISVGCYLCHRGLSLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...CAGCCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp GAAAAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCTATGTCACAGAGGGCTaGTTAAGGGCTTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: EKVKISRLSAQVAGNRQPYVTEG*LRACSV
Trigger: AACACTGCAAGCCCTTAATCAGCCCTCTGTGACATA...GGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR TCA 90 bp CCGGCAGGGGAAGTAAGTGTCAGTAGATTGTGGCCAGACATGTCCATCTGGCATAGTAAAGCTCAACGATaGAGTTCTGGAATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PAGEVSVSRLWPDMSIWHSKAQR*SSGISG
Trigger: CCCTGAGATTCCAGAACTTCATCGTTGAGCTTTACT...ATGCCAGATGGACATGTCTGGCCACAATCTACTGACACTTACTTCCCCTGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR GCA 90 bp AAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGACTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: KVKISRLSAQVAGNRQPRLMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...TCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR GCA 90 bp TTCTGCATTGAGATGCATGGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCCCTTCTGCATTGAGATaGATGGTTTCCAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: FCIEMHGFQGSNECIPHAPSALR*MVSRGP
Trigger: TGGACCCCTGGAAACCATGCATCTCAATGCAGAAGG...GGCATGCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp ATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGTCACTACCTTCTGCATTGAGATaGATGGTTTCCAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: MNAYRMPNPSDMTRSRSLPSALR*MVSRGP
Trigger: TGGACCCCTGGAAACCATGCATCTCAATGCAGAAGG...TAGTGACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp CAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTACACTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGC +
Preference number: 4 (lower is better)
Translates to: QKSVGHVLCLRCICRSSLHSSLH*LLAAKC
Trigger: GCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTG...TAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp ACATGGACCAAGCCAGCAAACAACTTGGAAGGCATGAGACAAGAAGTGGAACTGCCTTCTGGACTCGCATaGGGCACTGTCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: TWTKPANNLEGMRQEVELPSGLA*GTVQSS
Trigger: AGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGG...CAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTTGGTCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTTTCATGCACATGTCCTaGTTAACCTTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLAVFPNRASNERSGSCIFMHMS*LTFSAV
Trigger: CACTGCTGAGAAGGTTAACCAGGACATGTGCATGAA...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp CCAGCTTCGCCCAATGACTCCACTATGTTAATCTTTACAACAACCCTACAAGGTAGAAAGCTAGAAGGGTaGATGCCAGGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PASPNDSTMLIFTTTLQGRKLEG*MPGAGA
Trigger: AGCCCCAGCCCCTGGCATCCACCCTTCTAGCTTTCT...ACCTTGTAGGGTTGTTGTAAAGATTAACATAGTGGAGTCATTGGGCGAAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646414.1
CDS-3UTR CCA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTGAGAAACTTGTGTGGTaGAGGCACACGATATTTGAT +
Preference number: 4 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCEKLVW*RHTIFD
Trigger: ATCAAATATCGTGTGCCTCCACCACACAAGTTTCTC...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTGGAGAGAAACTTGTGTaGTGGAGGCACACGATATTT +
Preference number: 4 (lower is better)
Translates to: GLAVFPNRASNERSGSCIGEKLV*WRHTIF
Trigger: AAATATCGTGTGCCTCCACCACACAAGTTTCTCTCC...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp TCTTCTTCAGTTCTAGATCTTCTGGAACACATTCTTTTGGGCCTCTTCTTGCCAGGAACGGGGGTGGAGTaGCCAGTGGAGCAAACTCGA +
Preference number: 4 (lower is better)
Translates to: SSSVLDLLEHILLGLFLPGTGVE*PVEQTR
Trigger: TCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCC...TGGCAAGAAGAGGCCCAAAAGAATGTGTTCCAGAAGATCTAGAACTGAAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR CAA 72 bp GTAGTATGGCGGATTCACAGGATGAGCCACGATGCATaGCTTCACATGGACCAAGCCAGCAAACAACTTGGA +
Preference number: 4 (lower is better)
Translates to: VVWRIHRMSHDA*LHMDQASKQLG
Trigger: TCCAAGTTGTTTGCTGGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCCATACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
3UTR CAA 72 bp GGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAGTCTCATGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: GSCITRNSLGLH*TLQLGESHEAL
Trigger: GAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp TTCTGCATTGAGATGCATGGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: FCIEMHGFQGSNECIPHATTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...GGCATGCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTGACAAGAAGTGGAACTaGTTAAGATCACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCDKKWN*LRSLDH
Trigger: ATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTC...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp GAAAAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCGTAGGACATGTTTTATaGCTTCGCTGTATCTGTCGC +
Preference number: 4 (lower is better)
Translates to: EKVKISRLSAQVAGNRQPVGHVL*LRCICR
Trigger: GCGACAGATACAGCGAAGGCATAAAACATGTCCTAC...GGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR CCA 90 bp ATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTCCCTCTACTGCTTCTTaGATATTGGGACAACCACTG +
Preference number: 4 (lower is better)
Translates to: IKGLQCSQIGPPMRGVEAPSTAS*ILGQPL
Trigger: CAGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGG...AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTATTCATGCACATGTCCTaGTTAACCTTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALFMHMS*LTFSAV
Trigger: CACTGCTGAGAAGGTTAACCAGGACATGTGCATGAA...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CCA 90 bp GACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGCTCATCACCACCAACTCACACATACCCTGCCCTCATaGGAAAGAATTTACAGGCAA +
Preference number: 4 (lower is better)
Translates to: DRQNPRSAISEAHHHQLTHTLPS*ERIYRQ
Trigger: TTGCCTGTAAATTCTTTCCCATGAGGGCAGGGTATG...TGTGAGTTGGTGGTGATGAGCTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp GATGTAGTATGGCGGATTCACAGGATGAGCCACGATGCATTGCTTCACATGGACTGGAACACATTCTTTTaGGCCTCTTCTTGCCATCGG +
Preference number: 4 (lower is better)
Translates to: DVVWRIHRMSHDALLHMDWNTFF*ASSCHR
Trigger: CCGATGGCAAGAAGAGGCCCAAAAGAATGTGTTCCA...GTCCATGTGAAGCAATGCATCGTGGCTCATCCTGTGAATCCGCCATACTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GATGACATCATTCCGAAGGACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGCTCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: DDIIPKDRQNPRSAISEALMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...AGCTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTCCTTCGGAATGATGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp GTTTCCAGGGGTCCAATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAGAGAAACTTGTGTGGTaGAGGCACACGATATTTGAT +
Preference number: 4 (lower is better)
Translates to: VSRGPMNAYRMPNPSDMTEKLVW*RHTIFD
Trigger: ATCAAATATCGTGTGCCTCCACCACACAAGTTTCTC...TGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCATTGGACCCCTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp ATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGTCACTAGGAGAGAAACTTGTGTaGTGGAGGCACACGATATTT +
Preference number: 4 (lower is better)
Translates to: MNAYRMPNPSDMTRSRSLGEKLV*WRHTIF
Trigger: AAATATCGTGTGCCTCCACCACACAAGTTTCTCTCC...TAGTGACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp AAACTGAGGCATGGAGGAATTAAGTCCACAAGGGTGATAAGTTATGGATCTATGTGGGGCTGGGGGAAATaGGCAGCTGTTGTTCAATGG +
Preference number: 4 (lower is better)
Translates to: KLRHGGIKSTRVISYGSMWGWGK*AAVVQW
Trigger: CCATTGAACAACAGCTGCTCATTTCCCCCAGCCCCA...CATAGATCCATAACTTATCACCCTTGTGGACTTAATTCCTCCATGCCTCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646414.1
CDS-3UTR GCA 90 bp TTGGAAGGCATGAGACAAGAAGTGGAACTGCTTAAGATCACTCGATCATCAATGCTGATGAGTGACAGCTaGTCTTCCACACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LEGMRQEVELLKITRSSMLMSDS*SSTLRE
Trigger: CTCCCTGAGTGTGGAAGAGCAGCTGTCACTCATCAG...CATTGATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTCTCATGCCTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR GCA 90 bp CAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTACTGATGAGTGACAGCTaGTCTTCCACACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QKSVGHVLCLRCICRSSLLMSDS*SSTLRE
Trigger: CTCCCTGAGTGTGGAAGAGCAGCTGTCACTCATCAG...TAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp TTGGCAGACATGTCTGAAGTAAAGCTCAACGATGAAGTTCTGGAATCTCAGGGCCCCTCTACTGCTTCTTaGATATTGGGACAACCACTG +
Preference number: 4 (lower is better)
Translates to: LADMSEVKLNDEVLESQGPSTAS*ILGQPL
Trigger: CAGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGG...GCCCTGAGATTCCAGAACTTCATCGTTGAGCTTTACTTCAGACATGTCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
3UTR CAA 72 bp CAGGAGAGAAACTTGTGTGGTGGAGGCACACGATATTaGATGGATAAATCCTCCTCCGTGACTATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QERNLCGGGTRY*MDKSSSVTISS
Trigger: AGAGGAGATAGTCACGGAGGAGGATTTATCCATCAAATATCGTGTGCCTCCACCACACAAGTTTCTCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp GCTTCGCCCAATGACTCCACTATGTTAATCTTTACAACAACCCTACAAGGTAGGACTTCATCTCCTTTCTaGTGTTTTCCAGGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: ASPNDSTMLIFTTTLQGRTSSPF*CFPGRS
Trigger: GGAACGCCCTGGAAAACATCAGAAAGGAGATGAAGT...CCTACCTTGTAGGGTTGTTGTAAAGATTAACATAGTGGAGTCATTGGGCGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646414.1
CDS-3UTR TCA 90 bp ATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTACCCAGGAATTTGGATaGGGTTCTATTCAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: IKGLQCSQIGPPMRGVEATQEFG*GSIQVL
Trigger: AAGAACTTGAATAGAACCTCATCCAAATTCCTGGGT...AGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp ATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGTCACTAACCCAGGAATTTGGATaGGGTTCTATTCAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: MNAYRMPNPSDMTRSRSLTQEFG*GSIQVL
Trigger: AAGAACTTGAATAGAACCTCATCCAAATTCCTGGGT...TAGTGACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp CCAGCTTCGCCCAATGACTCCACTATGTTAATCTTTACAACAACCCTACAAGGTCTGTTTCAGACTTCCTaGGGTACCCATAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: PASPNDSTMLIFTTTLQGLFQTS*GTHRDR
Trigger: TCTGTCTCTATGGGTACCTCAGGAAGTCTGAAACAG...ACCTTGTAGGGTTGTTGTAAAGATTAACATAGTGGAGTCATTGGGCGAAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646414.1
CDS-3UTR TCA 90 bp GCTTCGCCCAATGACTCCACTATGTTAATCTTTACAACAACCCTACAAGGTAGGAAGCAATCTGACTCCTaGGTCCTTCCTCTTAACCAC +
Preference number: 4 (lower is better)
Translates to: ASPNDSTMLIFTTTLQGRKQSDS*VLPLNH
Trigger: GTGGTTAAGAGGAAGGACTCAGGAGTCAGATTGCTT...CCTACCTTGTAGGGTTGTTGTAAAGATTAACATAGTGGAGTCATTGGGCGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646414.1
CDS-3UTR GCA 90 bp ATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGTCACTAGACAAGAAGTGGAACTaGTTAAGATCACTCGATCAT +
Preference number: 4 (lower is better)
Translates to: MNAYRMPNPSDMTRSRSLDKKWN*LRSLDH
Trigger: ATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTC...TAGTGACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GTCCAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: VQKSVGHVLCLRCICRSSLMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...GCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR GCA 90 bp ACAGGCAACAAACTTAGCTACTGTCCAGCCAAAAGTCTATTGTCACAACACAATGGCCTCGCTGATGATTaGATATTGCAGGCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: TGNKLSYCPAKSLLSQHNGLADD*ILQAVQ
Trigger: CTGAACCGCCTGCAATATGCAATCATCAGCGAGGCC...ATTGTGTTGTGACAATAGACTTTTGGCTGGACAGTAGCTAAGTTTGTTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR GCA 90 bp GAATTTACAGGCAACAAACTTAGCTACTGTCCAGCCAAAAGTCTATTGTCACAAGAACCTGCCGAGGGTTaGAGATTCATTCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: EFTGNKLSYCPAKSLLSQEPAEG*RFIPRH
Trigger: GTGCCTGGGAATGAATCTGCAACCCTCGGCAGGTTC...TTGTGACAATAGACTTTTGGCTGGACAGTAGCTAAGTTTGTTGCCTGTAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR GCA 90 bp ACACGATATTTGATGGATAAATCCTCCTCCGTGACTATCTCCTCTACTGATCACAGAAGTAGAGTACTCTaGCACCTTCAGCCCTACGAG +
Preference number: 4 (lower is better)
Translates to: TRYLMDKSSSVTISSTDHRSRVL*HLQPYE
Trigger: CTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCT...GTGATCAGTAGAGGAGATAGTCACGGAGGAGGATTTATCCATCAAATATCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACCTTAGAAGTAGAGTACTCTaGCACCTTCAGCCCTACGAG +
Preference number: 4 (lower is better)
Translates to: VGHVLCLRCICRSSLTYLRSRVL*HLQPYE
Trigger: CTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCT...AAGGTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GCTTCGCCCAATGACTCCACTATGTTAATCTTTACAACAACCCTACAAGGTAGGCCACTACACTCCAACTaGTGTTTCAGACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASPNDSTMLIFTTTLQGRPLHSN*CFRLPE
Trigger: CTCAGGAAGTCTGAAACAGCAGTTGGAGTGTAGTGG...CCTACCTTGTAGGGTTGTTGTAAAGATTAACATAGTGGAGTCATTGGGCGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646414.1
CDS-3UTR CCA 90 bp CAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTATTCTTCATCAGGGCGTaGGTTCTGTCCACTGTCGTA +
Preference number: 4 (lower is better)
Translates to: QKSVGHVLCLRCICRSSLFFIRA*VLSTVV
Trigger: TACGACAGTGGACAGAACCCACGCCCTGATGAAGAA...TAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp GTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACCTTAGCTTAGGATCTCCGTaGGCTGCTACCTATGTCACA +
Preference number: 4 (lower is better)
Translates to: VGHVLCLRCICRSSLTYLSLGSP*AATYVT
Trigger: TGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCT...AAGGTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp TTGGAAGGCATGAGACAAGAAGTGGAACTGCTTAAGATCACTCGATCATCAATGCGGGATGTTAGGATTTaGGGGTCCAAGATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LEGMRQEVELLKITRSSMRDVRI*GSKIQS
Trigger: AGACTGGATCTTGGACCCCCAAATCCTAACATCCCG...CATTGATGATCGAGTGATCTTAAGCAGTTCCACTTCTTGTCTCATGCCTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR TCA 90 bp TCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACACAACTTGGAAGGCATaGGACAAGAAGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: SVGHVLCLRCICRSSLTYTTWKA*DKKWNC
Trigger: GCAGTTCCACTTCTTGTCTCATGCCTTCCAAGTTGT...GTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CCA 90 bp ACAGGCAACAAACTTAGCTACTGTCCAGCCAAAAGTCTATTGTCACAACACAATTTCTTCATCAGGGCGTaGGTTCTGTCCACTGTCGTA +
Preference number: 4 (lower is better)
Translates to: TGNKLSYCPAKSLLSQHNFFIRA*VLSTVV
Trigger: TACGACAGTGGACAGAACCCACGCCCTGATGAAGAA...ATTGTGTTGTGACAATAGACTTTTGGCTGGACAGTAGCTAAGTTTGTTGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CCA 90 bp AGTGGAAGCTGCATTACAAGAAATTCACTGGGGCTGCACTTGACTCTTCAACTTTTCATGCACATGTCCTaGTTAACCTTCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGSCITRNSLGLHLTLQLFMHMS*LTFSAV
Trigger: CACTGCTGAGAAGGTTAACCAGGACATGTGCATGAA...AAGTTGAAGAGTCAAGTGCAGCCCCAGTGAATTTCTTGTAATGCAGCTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR TCA 90 bp GCAGTGGCCCTGGAAAACTCTGGAATGGGTCCAAAAGTCTGTAGGACATGTTTTAAGTCCACTGTCAACTaGGAAACAGGAGAAAAATTA +
Preference number: 4 (lower is better)
Translates to: AVALENSGMGPKVCRTCFKSTVN*ETGEKL
Trigger: TAATTTTTCTCCTGTTTCTCAGTTGACAGTGGACTT...AAAACATGTCCTACAGACTTTTGGACCCATTCCAGAGTTTTCCAGGGCCACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR GCA 90 bp GAATTTACAGGCAACAAACTTAGCTACTGTCCAGCCAAAAGTCTATTGTCACAACAGGATGAGCCACGATaGATTGCTTCACATGGACCA +
Preference number: 4 (lower is better)
Translates to: EFTGNKLSYCPAKSLLSQQDEPR*IASHGP
Trigger: TGGTCCATGTGAAGCAATGCATCGTGGCTCATCCTG...TTGTGACAATAGACTTTTGGCTGGACAGTAGCTAAGTTTGTTGCCTGTAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR GCA 90 bp GTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACCTTCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAG +
Preference number: 4 (lower is better)
Translates to: VGHVLCLRCICRSSLTYLLMIAY*RRFRTK
Trigger: CTTCGTTCTGAACCGCCTGCAATATGCAATCATCAG...AAGGTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
3UTR CAA 72 bp AACTTTACTACTACTATCACCAGCAGGAACACAGACTaGCTACCCAGGAATTTGGATGAGGTTCTATTCAAG +
Preference number: 4 (lower is better)
Translates to: NFTTTITSRNTD*LPRNLDEVLFK
Trigger: CTTGAATAGAACCTCATCCAAATTCCTGGGTAGCAAGTCTGTGTTCCTGCTGGTGATAGTAGTAGTAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CCA 90 bp GCTTCGCCCAATGACTCCACTATGTTAATCTTTACAACAACCCTACAAGGTAGGGCAGCTGTTGTTCAATaGGTACAGAGTTTTAATTCT +
Preference number: 4 (lower is better)
Translates to: ASPNDSTMLIFTTTLQGRAAVVQ*VQSFNS
Trigger: AGAATTAAAACTCTGTACCCATTGAACAACAGCTGC...CCTACCTTGTAGGGTTGTTGTAAAGATTAACATAGTGGAGTCATTGGGCGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646414.1
CDS-3UTR CCA 90 bp GTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACCTTTGCTACCCAGGAATTTaGATGAGGTTCTATTCAAGT +
Preference number: 4 (lower is better)
Translates to: VGHVLCLRCICRSSLTYLCYPGI*MRFYSS
Trigger: ACTTGAATAGAACCTCATCCAAATTCCTGGGTAGCA...AAGGTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR TCA 90 bp ACAGGCAACAAACTTAGCTACTGTCCAGCCAAAAGTCTATTGTCACAACACAATTCACTCGATCATCAATaGTGGAATCTAACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: TGNKLSYCPAKSLLSQHNSLDHQ*WNLTEQ
Trigger: TTGCTCAGTTAGATTCCATCATTGATGATCGAGTGA...ATTGTGTTGTGACAATAGACTTTTGGCTGGACAGTAGCTAAGTTTGTTGCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CAA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAAAGAAAGCACTGGGCTaGTGTGGATCACCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PRWQEIDSPENASAAVPPKKALG*CGSPQG
Trigger: GCCCTGGGGTGATCCACACAAGCCCAGTGCTTTCTT...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGTCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: QVAGNRQPRERKCCCAARSLGLH*TLQLGE
Trigger: CTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGA...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACTCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHSLGLH*TLQLGE
Trigger: CTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGA...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS GCA 90 bp GAAGCCAACTCCACTAGCCGCCAGGCCTCGCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAGCCGGCCACCTCCTTCTGGACTCGC +
Preference number: 5 (lower is better)
Translates to: EANSTSRQASLMIAY*RRFRTKPATSFWTR
Trigger: GCGAGTCCAGAAGGAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCCTGGCGGCTAGTGGAGTTGGCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS GCA 90 bp ACACACACCTCCACTAGCCGCCAGGCCTCGCTGATGATTGCATATTaGAGGCGGTTCAGAACGAAGCCGGCCACCTCCTTCTGGACTCGC +
Preference number: 5 (lower is better)
Translates to: THTSTSRQASLMIAY*RRFRTKPATSFWTR
Trigger: GCGAGTCCAGAAGGAGGTGGCCGGCTTCGTTCTGAACCGCCTGCAATATGCAATCATCAGCGAGGCCTGGCGGCTAGTGGAGGTGTGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645525.1
CDS-3UTR CAA 90 bp GCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: ARPRAMIQSDGQTTGLHHMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...GTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp CAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 5 (lower is better)
Translates to: QVAGNRQPRERKCCCAARGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...CCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp CCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 5 (lower is better)
Translates to: PRWQEIDSPENASAAVPPGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...TGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 5 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp CGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCACCCTCTACTGCTTCTaGGATATTGGGACAACCACT +
Preference number: 5 (lower is better)
Translates to: RQPRERKCCCAARPRAMITLYCF*DIGTTT
Trigger: AGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGGT...GATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp CAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGACCCTCTACTGCTTCTaGGATATTGGGACAACCACT +
Preference number: 5 (lower is better)
Translates to: QEIDSPENASAAVPPGPGTLYCF*DIGTTT
Trigger: AGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGGT...CCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp CACCAGCAGGCTGAGAACCTGCCGAGGGTTGCAGATTCATTCCCAGGCACCTCCAGAACCTGCCGAGGGTaGCAGATTCATTCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: HQQAENLPRVADSFPGTSRTCRG*QIHSQA
Trigger: TGCCTGGGAATGAATCTGCAACCCTCGGCAGGTTCT...GGAGGTGCCTGGGAATGAATCTGCAACCCTCGGCAGGTTCTCAGCCTGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS GCA 90 bp TCCTTCCTCTTAACCACTACACTCCAACTGCTGTTTCAGACTTCCTaGCAACGATCACCACGCAGCCGGCCGCGGAGGACGCCATGGTTG +
Preference number: 5 (lower is better)
Translates to: SFLLTTTLQLLFQTS*QRSPRSRPRRTPWL
Trigger: CAACCATGGCGTCCTCCGCGGCCGGCTGCGTGGTGATCGTTGGCAGGAAGTCTGAAACAGCAGTTGGAGTGTAGTGGTTAAGAGGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643750.1
CDS CCA 90 bp TTTGGGGGTCCAAGATCCAGTCTCTTTGGTGGAACGGGGGTGGAGTaGCCAGTGGAGCAAACTCGAGTGCCCGTACTGAATGTGCATGGC +
Preference number: 5 (lower is better)
Translates to: FGGPRSSLFGGTGVE*PVEQTRVPVLNVHG
Trigger: GCCATGCACATTCAGTACGGGCACTCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTGGACCCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644153.1
CDS-3UTR CAA 90 bp TCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATACCCTCTACTGCTTCTaGGATATTGGGACAACCACT +
Preference number: 5 (lower is better)
Translates to: STAPRTQVLLCRQAQGYDTLYCF*DIGTTT
Trigger: AGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGGT...ATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp AGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 5 (lower is better)
Translates to: RAMIQSDGQTTGLHHPTQGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...CTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp AGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCAGCAGGAACACAGACTaGCTACCCAGGAATTTGGAT +
Preference number: 5 (lower is better)
Translates to: RPRAMIQSDGQTTGLHHPSRNTD*LPRNLD
Trigger: ATCCAAATTCCTGGGTAGCAAGTCTGTGTTCCTGCT...GGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp AGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGAGTCCGCCTTCTGCATaGAGATGCATGGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RAMIQSDGQTTGLHHPTQSPPSA*RCMVSR
Trigger: CCTGGAAACCATGCATCTCAATGCAGAAGGCGGACT...CTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR CAA 90 bp TGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGCCGCACTGCTTCTTGGATATaGGGACAACCACTGATGAGT +
Preference number: 5 (lower is better)
Translates to: CPGGRKSTAPRTQVLLCRTASWI*GQPLMS
Trigger: ACTCATCAGTGGTTGTCCCAATATCCAAGAAGCAGT...GCGGCACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp TGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGCAGACTACCACCCTCTACTGCTTCTaGGATATTGGGACAACCACT +
Preference number: 5 (lower is better)
Translates to: CCCAARPRAMIQSDGQTTTLYCF*DIGTTT
Trigger: AGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGGT...GGTAGTCTGCCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCTCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: QAAHKTASLGSPWAATYVSLGLH*TLQLGE
Trigger: CTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGA...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp CAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCTGTCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: QDSQLRISVGCYLCHRGLSLGLH*TLQLGE
Trigger: CTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGA...CAGCCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp CACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCGTAGGGGCCTCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: HCPIFFIRAWVLSTVVGASLGLH*TLQLGE
Trigger: CTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGA...GGCCCCTACGACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CAA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKSLGLH*TLQLGE
Trigger: CTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGA...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp CCACCTCCTTCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTTCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: PPPSGLAWGTVQSSSSGRSLGLH*TLQLGE
Trigger: CTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGA...ACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGAAGGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS TCA 90 bp CTTCCAGGCTGCCCAAGGAACAACTTTCACTGTCCTGCTCAACTTTaGGAGGGAGGGAAGAAGGAGGGAGAAAGGAAGGGAGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LPGCPRNNFHCPAQL*EGGKKEGERKGGRE
Trigger: CTCCCTCCCTCCCTTCCTTTCTCCCTCCTTCTTCCCTCCCTCTCAAAGTTGAGCAGGACAGTGAAAGTTGTTCCTTGGGCAGCCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645525.1
CDS-3UTR CAA 90 bp AGGGCTATGATCCAAAGTGACGGGCAGACTACCGGCCTGCACCACCCCACTCAGACCCTCTACTGCTTCTaGGATATTGGGACAACCACT +
Preference number: 5 (lower is better)
Translates to: RAMIQSDGQTTGLHHPTQTLYCF*DIGTTT
Trigger: AGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGGT...CTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp GAACGCAAGTGCTGCTGTGCCGCCAGGCCCAGGGCTATGATCCAAAGTGACGGGAAGCCAGCAAACAACTaGGAAGGCATGAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: ERKCCCAARPRAMIQSDGKPANN*EGMRQE
Trigger: TTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTT...CCCGTCACTTTGGATCATAGCCCTGGGCCTGGCGGCACAGCAGCACTTGCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp CGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: RMGHCPIFFIRAWVLSTVMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...GACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS GCA 90 bp ATTGTGGCCAGACATGTCCATCTGGCATTTCCAAGACCACAGGGCTaGTTCATCCCAAAACTGAAGCCAACTCCACTAGCCGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: IVARHVHLAFPRPQG*FIPKLKPTPLAARP
Trigger: AGGCCTGGCGGCTAGTGGAGTTGGCTTCAGTTTTGGGATGAAGCAGCCCTGTGGTCTTGGAAATGCCAGATGGACATGTCTGGCCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CAA 90 bp ATGAGGCACTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTGCTCCGGGTCATCAACTGCTTCTTGGATATaGGGACAACCACTGATGAGT +
Preference number: 5 (lower is better)
Translates to: MRHSSLHCLLAAKCSGSSTASWI*GQPLMS
Trigger: ACTCATCAGTGGTTGTCCCAATATCCAAGAAGCAGT...TGATGACCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGAGTGCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp ACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: TQAAHKTASLGSPWAATYMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...ATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp ACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGGCGACATGAAGATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: TARSRVLCHLQPYEGDMKMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...CTTCATGTCGCCCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGGCTGATGATTGCATATaGCAGGCGGTTCAGAACGAA +
Preference number: 5 (lower is better)
Translates to: YLPRWQEIDSPENASAAVADDCI*QAVQNE
Trigger: TTCGTTCTGAACCGCCTGCAATATGCAATCATCAGC...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp TCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 5 (lower is better)
Translates to: SGLAWGTVQSSSSGRGFCGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...ACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CAA 90 bp TCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 5 (lower is better)
Translates to: SGCTQDSQLRISVGCYLCGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...ACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS GCA 90 bp GTTTCTAGTCCTGGGCGCCATGGAGGACATAGGCTGGGCTACTGCTaGGACCCTGACTCATTTCCCACATCTTTCAAACCCTTAAAGGCT +
Preference number: 5 (lower is better)
Translates to: VSSPGRHGGHRLGYC*DPDSFPTSFKPLKA
Trigger: AGCCTTTAAGGGTTTGAAAGATGTGGGAAATGAGTCAGGGTCGCAGCAGTAGCCCAGCCTATGTCCTCCATGGCGCCCAGGACTAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS-3UTR CAA 90 bp GGGCTGCACTTGACTCTTCAACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCAACCCTCTACTGCTTCTaGGATATTGGGACAACCACT +
Preference number: 5 (lower is better)
Translates to: GLHLTLQLGESHEALVPPTLYCF*DIGTTT
Trigger: AGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGGT...TGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp GGGCTGCACTTGACTCTTCAACTTGGCGAGTCTCATGAGGCACTCGTCCCTCCAGCTGATGATTGCATATaGCAGGCGGTTCAGAACGAA +
Preference number: 5 (lower is better)
Translates to: GLHLTLQLGESHEALVPPADDCI*QAVQNE
Trigger: TTCGTTCTGAACCGCCTGCAATATGCAATCATCAGC...TGGAGGGACGAGTGCCTCATGAGACTCGCCAAGTTGAAGAGTCAAGTGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCGCTGATGATTGCATATaGCAGGCGGTTCAGAACGAA +
Preference number: 5 (lower is better)
Translates to: QAAHKTASLGSPWAATYVADDCI*QAVQNE
Trigger: TTCGTTCTGAACCGCCTGCAATATGCAATCATCAGC...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp TATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGTGCTGCTGTGAACATACCTTCTGCATaGAGATGCATGGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: YLPRWQEIDSPENASAAVNIPSA*RCMVSR
Trigger: CCTGGAAACCATGCATCTCAATGCAGAAGGTATGTT...CACAGCAGCACTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR CAA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTATCACTGGGGCTGCACTaGACTCTTCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALSLGLH*TLQLGE
Trigger: CTCGCCAAGTTGAAGAGTCAAGTGCAGCCCCAGTGA...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 5 (lower is better)
Translates to: GLAVFPNRASNERSGSCIGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp ATGAATGCATACCGCATGCCCAACCCTTCTGACATGACAAGGTCCAGGTCACTAAAGAAAGCACTGGGCTaGTGTGGATCACCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: MNAYRMPNPSDMTRSRSLKKALG*CGSPQG
Trigger: GCCCTGGGGTGATCCACACAAGCCCAGTGCTTTCTT...TAGTGACCTGGACCTTGTCATGTCAGAAGGGTTGGGCATGCGGTATGCATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp CAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCGGAGGCACACGATATTaGATGGATAAATCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QAAHKTASLGSPWAATYVGGTRY*MDKSSS
Trigger: GGAGGAGGATTTATCCATCAAATATCGTGTGCCTCC...GACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp TCTGGACTCGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCTGGAACACATTCTTTaGGGCCTCTTCTTGCCATCG +
Preference number: 5 (lower is better)
Translates to: SGLAWGTVQSSSSGRGFCLEHIL*GLFLPS
Trigger: CGATGGCAAGAAGAGGCCCAAAAGAATGTGTTCCAG...ACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCGAGTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS GCA 90 bp TCTACTGCTTCTTGGATATTGGGACAACCACTGATGAGTGACAGCTaGTCTTCCACACTCAGGGAGCCTTTCAGAGAACCTGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: STASWILGQPLMSDS*SSTLREPFREPACS
Trigger: GGAGCAGGCAGGTTCTCTGAAAGGCTCCCTGAGTGTGGAAGAGCAGCTGTCACTCATCAGTGGTTGTCCCAATATCCAAGAAGCAGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
ENST00000644872.1
CDS-3UTR CAA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGACTGCTTCTTGGATATaGGGACAACCACTGATGAGT +
Preference number: 5 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKTASWI*GQPLMS
Trigger: ACTCATCAGTGGTTGTCCCAATATCCAAGAAGCAGT...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTAACTGCTTCTTGGATATaGGGACAACCACTGATGAGT +
Preference number: 5 (lower is better)
Translates to: HSGCTQDSQLRISVGCYLTASWI*GQPLMS
Trigger: ACTCATCAGTGGTTGTCCCAATATCCAAGAAGCAGT...TAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp CGCATGGGGCACTGTCCAATCTTCTTCATCAGGGCGTGGGTTCTGTCCACTGTCAAGCCAGCAAACAACTaGGAAGGCATGAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: RMGHCPIFFIRAWVLSTVKPANN*EGMRQE
Trigger: TTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTT...GACAGTGGACAGAACCCACGCCCTGATGAAGAAGATTGGACAGTGCCCCATGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CAA 90 bp ATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAGAACGCAAGAAGCCAGCAAACAACTaGGAAGGCATGAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: ISRLSAQVAGNRQPRERKKPANN*EGMRQE
Trigger: TTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTT...CTTGCGTTCTCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp CACTCAGGCTGCACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTAAAGCCAGCAAACAACTaGGAAGGCATGAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: HSGCTQDSQLRISVGCYLKPANN*EGMRQE
Trigger: TTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTT...TAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGTGCAGCCTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp GAAAAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: EKVKISRLSAQVAGNRQPMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...GGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp ACAAATCAAGAGACCAAGAACTCAATCTCTGCGGCCCAGGCCCTAAGGACAGCAATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: TNQETKNSISAAQALRTAMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...TGCTGTCCTTAGGGCCTGGGCCGCAGAGATTGAGTTCTTGGTCTCTTGATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CAA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTAATGAGCCACGATGCATaGCTTCACATGGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALMSHDA*LHMDQA
Trigger: GGCTTGGTCCATGTGAAGCAATGCATCGTGGCTCAT...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp CAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGCTGAACATACCTTCTGCATaGAGATGCATGGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QDSQLRISVGCYLCHRGLNIPSA*RCMVSR
Trigger: CCTGGAAACCATGCATCTCAATGCAGAAGGTATGTT...CAGCCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR CAA 90 bp ACACCCACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCGGCCCAGGCCGTAAGTGTCAGTAGATaGTGGCCAGACATGTCCATC +
Preference number: 5 (lower is better)
Translates to: TPTLTNQETKNSISAAQAVSVSR*WPDMSI
Trigger: GATGGACATGTCTGGCCACAATCTACTGACACTTAC...GGCCTGGGCCGCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGTGGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CAA 90 bp TTCTGCATTGAGATGCATGGTTTCCAGGGGTCCAATGAATGCATACCGCATGCCCAAGATCCAGTCTCTTaGGTGGAACGGGGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: FCIEMHGFQGSNECIPHAQDPVS*VERGWS
Trigger: ACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTG...GGCATGCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CAA 90 bp AAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGACTGGAACACATTCTTTaGGGCCTCTTCTTGCCATCG +
Preference number: 5 (lower is better)
Translates to: KVKISRLSAQVAGNRQPRLEHIL*GLFLPS
Trigger: CGATGGCAAGAAGAGGCCCAAAAGAATGTGTTCCAG...TCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CAA 90 bp GGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTGCTGATGATTGCATATaGCAGGCGGTTCAGAACGAA +
Preference number: 5 (lower is better)
Translates to: GLAVFPNRASNERSGSCIADDCI*QAVQNE
Trigger: TTCGTTCTGAACCGCCTGCAATATGCAATCATCAGC...AATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp GGGCTGATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGCTGATGATTGCATATaGCAGGCGGTTCAGAACGAA +
Preference number: 5 (lower is better)
Translates to: GLIKGLQCSQIGPPMRGVADDCI*QAVQNE
Trigger: TTCGTTCTGAACCGCCTGCAATATGCAATCATCAGC...CACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp ACACAAGACAGCCAGCTTAGGATCTCCGTGGGCTGCTACCTATGTCACAGAGGGAACATACCTTCTGCATaGAGATGCATGGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: TQDSQLRISVGCYLCHRGNIPSA*RCMVSR
Trigger: CCTGGAAACCATGCATCTCAATGCAGAAGGTATGTT...CCCTCTGTGACATAGGTAGCAGCCCACGGAGATCCTAAGCTGGCTGTCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR CAA 90 bp ACAGCGAGAAGTAGAGTACTCTGCCACCTTCAGCCCTACGAGGGCGACATGAAGAACATACCTTCTGCATaGAGATGCATGGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: TARSRVLCHLQPYEGDMKNIPSA*RCMVSR
Trigger: CCTGGAAACCATGCATCTCAATGCAGAAGGTATGTT...CTTCATGTCGCCCTCGTAGGGCTGAAGGTGGCAGAGTACTCTACTTCTCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS TCA 90 bp TCCTTCCTCTTAACCACTACACTCCAACTGCTGTTTCAGACTTCCTaGGGTACCCATAGAGACAGAAAGCTAGAAGGGTGGATGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SFLLTTTLQLLFQTS*GTHRDRKLEGWMPG
Trigger: CCCTGGCATCCACCCTTCTAGCTTTCTGTCTCTATGGGTACCTCAGGAAGTCTGAAACAGCAGTTGGAGTGTAGTGGTTAAGAGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646414.1
CDS-3UTR CAA 90 bp GCCCCAGACCACACCCACCCTGACAAATCAAGAGACCAAGAACTCAATCTCTGCACTGCTTCTTGGATATaGGGACAACCACTGATGAGT +
Preference number: 5 (lower is better)
Translates to: APDHTHPDKSRDQELNLCTASWI*GQPLMS
Trigger: ACTCATCAGTGGTTGTCCCAATATCCAAGAAGCAGT...GCAGAGATTGAGTTCTTGGTCTCTTGATTTGTCAGGGTGGGTGTGGTCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CAA 90 bp AAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCCGAAAGCCAGCAAACAACTaGGAAGGCATGAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: KVKISRLSAQVAGNRQPRKPANN*EGMRQE
Trigger: TTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTT...TCGGGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp GGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGGAAGCTGCATTAGCTGATGATTGCATATaGCAGGCGGTTCAGAACGAA +
Preference number: 5 (lower is better)
Translates to: GLQCSQIGPPMRGVEAALADDCI*QAVQNE
Trigger: TTCGTTCTGAACCGCCTGCAATATGCAATCATCAGC...TAATGCAGCTTCCACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
CDS-3UTR CAA 90 bp GAAAAGGTGAAAATCTCCAGGTTATCTGCCCAGGTGGCAGGAAATCGACAGCCCGCTGATGATTGCATATaGCAGGCGGTTCAGAACGAA +
Preference number: 5 (lower is better)
Translates to: EKVKISRLSAQVAGNRQPADDCI*QAVQNE
Trigger: TTCGTTCTGAACCGCCTGCAATATGCAATCATCAGC...GGGCTGTCGATTTCCTGCCACCTGGGCAGATAACCTGGAGATTTTCACCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS-3UTR CAA 90 bp GGGCTGATTAAGGGCTTGCAGTGTTCCCAAATAGGGCCTCCAATGAGAGGAGTGAACATACCTTCTGCATaGAGATGCATGGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GLIKGLQCSQIGPPMRGVNIPSA*RCMVSR
Trigger: CCTGGAAACCATGCATCTCAATGCAGAAGGTATGTT...CACTCCTCTCATTGGAGGCCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644593.1
CDS CCA 90 bp AATGCTATGAAAGGGCAGGAAGGAGAGAAGCCTGTCATCGTGTCCTaGTATCAGGTGACTGTAAGAAGAACCTCTCAGGCAGACAGTGAA +
Preference number: 5 (lower is better)
Translates to: NAMKGQEGEKPVIVS*YQVTVRRTSQADSE
Trigger: TTCACTGTCTGCCTGAGAGGTTCTTCTTACAGTCACCTGATACCAGGACACGATGACAGGCTTCTCTCCTTCCTGCCCTTTCATAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645525.1
CDS-3UTR CAA 90 bp CATCATTCCGAAGGACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGCTCATCAGCTGATGATTGCATATaGCAGGCGGTTCAGAACGAA +
Preference number: 5 (lower is better)
Translates to: HHSEGQAEPKVSNFRSSSADDCI*QAVQNE
Trigger: TTCGTTCTGAACCGCCTGCAATATGCAATCATCAGC...TGATGAGCTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTCCTTCGGAATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CAA 90 bp GTCCAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCGGGCTGATTAAGGGCTaGCAGTGTTCCCAAATAGGG +
Preference number: 5 (lower is better)
Translates to: VQKSVGHVLCLRCICRSSGLIKG*QCSQIG
Trigger: CCCTATTTGGGAACACTGCAAGCCCTTAATCAGCCC...GCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp TCCTCCTCCGTGACTATCTCCTCTACTGATCACCAGCTACACCGAACCATCTTTGGAGGCACACGATATTaGATGGATAAATCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSSVTISSTDHQLHRTIFGGTRY*MDKSSS
Trigger: GGAGGAGGATTTATCCATCAAATATCGTGTGCCTCC...AAAGATGGTTCGGTGTAGCTGGTGATCAGTAGAGGAGATAGTCACGGAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS TCA 90 bp GTGGGAAAATGCAGTGGGCCACATAGGTTATTATGTCTAATGCTATaGAAGGGCAGGAAGGAGAGAAGCCTGTCATCGTGTCCTGGTATC +
Preference number: 5 (lower is better)
Translates to: VGKCSGPHRLLCLML*KGRKERSLSSCPGI
Trigger: GATACCAGGACACGATGACAGGCTTCTCTCCTTCCTGCCCTTTCATAGCATTAGACATAATAACCTATGTGGCCCACTGCATTTTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645525.1
CDS-3UTR CAA 90 bp CATCATTCCGAAGGACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGCTCATCAAAGCCAGCAAACAACTaGGAAGGCATGAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: HHSEGQAEPKVSNFRSSSKPANN*EGMRQE
Trigger: TTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTT...TGATGAGCTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTCCTTCGGAATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CAA 90 bp TCCTCCTCCGTGACTATCTCCTCTACTGATCACCAGCTACACCGAACCATCTTTAACATACCTTCTGCATaGAGATGCATGGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSSVTISSTDHQLHRTIFNIPSA*RCMVSR
Trigger: CCTGGAAACCATGCATCTCAATGCAGAAGGTATGTT...AAAGATGGTTCGGTGTAGCTGGTGATCAGTAGAGGAGATAGTCACGGAGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp GACAGGCAGAACCCAAGGTCAGCAATTTCCGAAGCTCATCACCACCAACTCACACCAGCCAAAAGTCTATaGTCACAACACAATGTCCTT +
Preference number: 5 (lower is better)
Translates to: DRQNPRSAISEAHHHQLTPAKSL*SQHNVL
Trigger: AAGGACATTGTGTTGTGACAATAGACTTTTGGCTGG...TGTGAGTTGGTGGTGATGAGCTTCGGAAATTGCTGACCTTGGGTTCTGCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS-3UTR CAA 90 bp GTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACCTTCAAGATCCAGTCTCTTaGGTGGAACGGGGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: VGHVLCLRCICRSSLTYLQDPVS*VERGWS
Trigger: ACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTG...AAGGTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643035.1
ENST00000644153.1
CDS-3UTR CAA 90 bp GTCCAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCACCCTCTACTGCTTCTaGGATATTGGGACAACCACT +
Preference number: 5 (lower is better)
Translates to: VQKSVGHVLCLRCICRSSTLYCF*DIGTTT
Trigger: AGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGGT...GCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp TCCTCCTCCGTGACTATCTCCTCTACTGATCACCAGCTACACCGAACCATCTTTTTGCTACCCAGGAATTaGGATGAGGTTCTATTCAAG +
Preference number: 5 (lower is better)
Translates to: SSSVTISSTDHQLHRTIFLLPRN*DEVLFK
Trigger: CTTGAATAGAACCTCATCCAAATTCCTGGGTAGCAA...AAAGATGGTTCGGTGTAGCTGGTGATCAGTAGAGGAGATAGTCACGGAGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp GTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACCTTACCCTCTACTGCTTCTaGGATATTGGGACAACCACT +
Preference number: 5 (lower is better)
Translates to: VGHVLCLRCICRSSLTYLTLYCF*DIGTTT
Trigger: AGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGGT...AAGGTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp ACACGATATTTGATGGATAAATCCTCCTCCGTGACTATCTCCTCTACTGATCACGCTGATGATTGCATATaGCAGGCGGTTCAGAACGAA +
Preference number: 5 (lower is better)
Translates to: TRYLMDKSSSVTISSTDHADDCI*QAVQNE
Trigger: TTCGTTCTGAACCGCCTGCAATATGCAATCATCAGC...GTGATCAGTAGAGGAGATAGTCACGGAGGAGGATTTATCCATCAAATATCGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS-3UTR CAA 90 bp GTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAACATACCTTAGCAGGAACACAGACTaGCTACCCAGGAATTTGGAT +
Preference number: 5 (lower is better)
Translates to: VGHVLCLRCICRSSLTYLSRNTD*LPRNLD
Trigger: ATCCAAATTCCTGGGTAGCAAGTCTGTGTTCCTGCT...AAGGTATGTTAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643887.1
ENST00000644153.1
CDS TCA 90 bp GTTCTAGATCTTCTGGAACACATTCCTGAAAAGGACACGTTTAAATaGCTATTCATGACCACTCGACTCAGGCCCCAAGCAAAGCATTTC +
Preference number: 5 (lower is better)
Translates to: VLDLLEHIPEKDTFK*LFMTTRLRPQAKHF
Trigger: GAAATGCTTTGCTTGGGGCCTGAGTCGAGTGGTCATGAATAGTCATTTAAACGTGTCCTTTTCAGGAATGTGTTCCAGAAGATCTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645525.1
CDS-3UTR CAA 90 bp CAAAAGTCTGTAGGACATGTTTTATGCCTTCGCTGTATCTGTCGCAGTAGCTTAAAGCCAGCAAACAACTaGGAAGGCATGAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: QKSVGHVLCLRCICRSSLKPANN*EGMRQE
Trigger: TTCTTGTCTCATGCCTTCCAAGTTGTTTGCTGGCTT...TAAGCTACTGCGACAGATACAGCGAAGGCATAAAACATGTCCTACAGACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643035.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
CDS-3UTR CAA 90 bp GAATTTACAGGCAACAAACTTAGCTACTGTCCAGCCAAAAGTCTATTGTCACAAACCCTCTACTGCTTCTaGGATATTGGGACAACCACT +
Preference number: 5 (lower is better)
Translates to: EFTGNKLSYCPAKSLLSQTLYCF*DIGTTT
Trigger: AGTGGTTGTCCCAATATCCAAGAAGCAGTAGAGGGT...TTGTGACAATAGACTTTTGGCTGGACAGTAGCTAAGTTTGTTGCCTGTAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS CCA 72 bp CCAAGATCCAGTCTCTTTGGTGGAACGGGGGTGGAGTaGCCAGTGGAGCAAACTCGAGTGCCCGTACTGAAT +
Preference number: 6 (lower is better)
Translates to: PRSSLFGGTGVE*PVEQTRVPVLN
Trigger: ATTCAGTACGGGCACTCGAGTTTGCTCCACTGGCCACTCCACCCCCGTTCCACCAAAGAGACTGGATCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644153.1
CDS CAA 90 bp GCTTCCAGGCTGCCCAAGGAACAACTTTCACTGTCCTGCTCAACTTaGAGAGGGAGGGAAGAAGGAGGGAGAAAGGAAGGGAGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: ASRLPKEQLSLSCST*RGREEGGRKEGREG
Trigger: TCCCTCCCTCCCTTCCTTTCTCCCTCCTTCTTCCCTCCCTCTCAAAGTTGAGCAGGACAGTGAAAGTTGTTCCTTGGGCAGCCTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645525.1
CDS GCA 72 bp GCTCAGCAGCTGGTCAGTCCGCCTTCTGCATTGAGATaGATGGTTTCCAGGGGTCCAATGAATGCATACCGC +
Preference number: 6 (lower is better)
Translates to: AQQLVSPPSALR*MVSRGPMNAYR
Trigger: GCGGTATGCATTCATTGGACCCCTGGAAACCATGCATCTCAATGCAGAAGGCGGACTGACCAGCTGCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644167.1
CDS TCA 72 bp TGCCCAAGGAACAACTTTCACTGTCCTGCTCAACTTTaGGAGGGAGGGAAGAAGGAGGGAGAAAGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: CPRNNFHCPAQL*EGGKKEGERKG
Trigger: TCCCTTCCTTTCTCCCTCCTTCTTCCCTCCCTCTCAAAGTTGAGCAGGACAGTGAAAGTTGTTCCTTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645525.1
CDS GCA 72 bp AGACATGTCCATCTGGCATTTCCAAGACCACAGGGCTaGTTCATCCCAAAACTGAAGCCAACTCCACTAGCC +
Preference number: 6 (lower is better)
Translates to: RHVHLAFPRPQG*FIPKLKPTPLA
Trigger: GGCTAGTGGAGTTGGCTTCAGTTTTGGGATGAAGCAGCCCTGTGGTCTTGGAAATGCCAGATGGACATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS CCA 72 bp AAAGGGCAGGAAGGAGAGAAGCCTGTCATCGTGTCCTaGTATCAGGTGACTGTAAGAAGAACCTCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: KGQEGEKPVIVS*YQVTVRRTSQA
Trigger: TGCCTGAGAGGTTCTTCTTACAGTCACCTGATACCAGGACACGATGACAGGCTTCTCTCCTTCCTGCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645525.1
CDS GCA 72 bp TCTTGGATATTGGGACAACCACTGATGAGTGACAGCTaGTCTTCCACACTCAGGGAGCCTTTCAGAGAACCT +
Preference number: 6 (lower is better)
Translates to: SWILGQPLMSDS*SSTLREPFREP
Trigger: AGGTTCTCTGAAAGGCTCCCTGAGTGTGGAAGAGCAGCTGTCACTCATCAGTGGTTGTCCCAATATCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298248.12
ENST00000382812.5
ENST00000643035.1
ENST00000643750.1
ENST00000643887.1
ENST00000644153.1
ENST00000644167.1
ENST00000644593.1
ENST00000644872.1
CDS CCA 72 bp GTAAGTGTCAGTAGATTGTGGCCAGACATGTCCATCTaGCATTTCCAAGACCACAGGGCTGCTTCATCCCAA +
Preference number: 6 (lower is better)
Translates to: VSVSRLWPDMSI*HFQDHRAASSQ
Trigger: TTGGGATGAAGCAGCCCTGTGGTCTTGGAAATGCCAGATGGACATGTCTGGCCACAATCTACTGACACTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480748.2
CDS TCA 72 bp TGCAGTGGGCCACATAGGTTATTATGTCTAATGCTATaGAAGGGCAGGAAGGAGAGAAGCCTGTCATCGTGT +
Preference number: 6 (lower is better)
Translates to: CSGPHRLLCLML*KGRKERSLSSC
Trigger: ACACGATGACAGGCTTCTCTCCTTCCTGCCCTTTCATAGCATTAGACATAATAACCTATGTGGCCCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645525.1