RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRYGN (Homo sapiens)

Ensembl gene IDs: ENSG00000127377

Ensembl transcript IDs: ENST00000337323.3, ENST00000462809.1, ENST00000476631.5, ENST00000478106.2, ENST00000491928.1, ENST00000644350.1

Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCACCATCATCAGCTGTGGGCTGAGGTGCGAGATTGTGGAGGCCTaGGGCCAGCAGGGTGCCAAGGCCCAAGGAGGCTGTGGGGTGGAG +
Preference number: 1 (lower is better)
Translates to: ITIISCGLRCEIVEA*GQQGAKAQGGCGVE
Trigger: CTCCACCCCACAGCCTCCTTGGGCCTTGGCACCCTGCTGGCCTCAGGCCTCCACAATCTCGCACCTCAGCCCACAGCTGATGATGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CCA 90 bp AGGGTTGGACGGCTGTTTCAGAAGAGACAGGGCCCTTGCCATGGGTaGGGAGGGCCTCCCGCTGGCAGATATGACACACAGAAGGCTCCA +
Preference number: 1 (lower is better)
Translates to: RVGRLFQKRQGPCHG*GGPPAGRYDTQKAP
Trigger: TGGAGCCTTCTGTGTGTCATATCTGCCAGCGGGAGGCCCTCCCCACCCATGGCAAGGGCCCTGTCTCTTCTGAAACAGCCGTCCAACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR TCA 90 bp ACAGGGCCCTTGCCATGGGTGGGGAGGGCCTCCCGCTGGCAGATATaGCACACAGAAGGCTCCACCTCCCTAACAAACTGGCAGAGAAAT +
Preference number: 1 (lower is better)
Translates to: TGPLPWVGRASRWQI*HTEGSTSLTNWQRN
Trigger: ATTTCTCTGCCAGTTTGTTAGGGAGGTGGAGCCTTCTGTGTGTCATATCTGCCAGCGGGAGGCCCTCCCCACCCATGGCAAGGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR TCA 90 bp CTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTaGTTGAAGAGAGCTGCTCAGCTGGAAGTCCTCAGCTCCGAAGCT +
Preference number: 1 (lower is better)
Translates to: LGCCWFCGGLFRSLI*LKRAAQLEVLSSEA
Trigger: AGCTTCGGAGCTGAGGACTTCCAGCTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR GCA 90 bp CGAAAAGGATCAATCAGCCAGCCAGACCTGGGTTTTAGTCCTGACTaGTGTGTGACCCTGGGCAAGTTGCTTAACCTGTCTGTGGCTGGC +
Preference number: 1 (lower is better)
Translates to: RKGSISQPDLGFSPD*CVTLGKLLNLSVAG
Trigger: GCCAGCCACAGACAGGTTAAGCAACTTGCCCAGGGTCACACAGCAGTCAGGACTAAAACCCAGGTCTGGCTGGCTGATTGATCCTTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR GCA 90 bp GGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTaGAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGC +
Preference number: 1 (lower is better)
Translates to: GAGAFTCQSVPGSEV*SQERWLGCCWFCGG
Trigger: GCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR CCA 90 bp GGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTaGCCTCTTCCGGTCCTTGATCTGATTGAAGAGAGCTGCTCAGCT +
Preference number: 1 (lower is better)
Translates to: GLQSGKVAGLLLVLW*PLPVLDLIEESCSA
Trigger: AGCTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR CCA 90 bp ACTGGGTCACCTACTACTAACCAGCCCTCATATGGCACCCGCTCATaGGTCACGCCTTTGGCTTTTACAAGGGTATACAGTTGGTACAGC +
Preference number: 1 (lower is better)
Translates to: TGSPTTNQPSYGTRS*VTPLAFTRVYSWYS
Trigger: GCTGTACCAACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATGAGGGCTGGTTAGTAGTAGGTGACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CCA 90 bp AGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTaGTGGCCTCTTCCGGTCCTTGATCTGATTGAAGAGAGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: RGLQSGKVAGLLLVL*WPLPVLDLIEESCS
Trigger: TGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR TCA 90 bp CACGCCTTTGGCTTTTACAAGGGTATACAGTTGGTACAGCAGACATaGTTGCACTCATTTCACAGAACAGGGTCTGAGGCCTGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: HAFGFYKGIQLVQQT*LHSFHRTGSEAWRG
Trigger: GCCTCTCCAGGCCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTATACCCTTGTAAAAGCCAAAGGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CCA 90 bp AGACACACAGCAGTGGCTTCTCCAATGTCACATCCTAGTGAGGGATaGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCT +
Preference number: 1 (lower is better)
Translates to: RHTAVASPMSHPSEG*SGNQVGVWSQVTFS
Trigger: AGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCATCCCTCACTAGGATGTGACATTGGAGAAGCCACTGCTGTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR TCA 90 bp GTTGGTACAGCAGACATGATTGCACTCATTTCACAGAACAGGGTCTaGGGCCTGGAGAGGCTTTGGGTTTGCGCCAAATTCATGACAAAA +
Preference number: 1 (lower is better)
Translates to: VGTADMIALISQNRV*GLERLWVCAKFMTK
Trigger: TTTTGTCATGAATTTGGCGCAAACCCAAAGCCTCTCCAGGCCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR GCA 90 bp CCTTTGGCTTTTACAAGGGTATACAGTTGGTACAGCAGACATGATTaGACTCATTTCACAGAACAGGGTCTGAGGCCTGGAGAGGCTTTG +
Preference number: 1 (lower is better)
Translates to: PLAFTRVYSWYSRHD*THFTEQGLRPGEAL
Trigger: CAAAGCCTCTCCAGGCCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTATACCCTTGTAAAAGCCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CCA 90 bp AAAAATATATCTAAATATGCAAATGTGTGGTGCTCTATAGAGGAGTaGTTAGGAACGAAAAGGATCAATCAGCCAGCCAGACCTGGGTTT +
Preference number: 1 (lower is better)
Translates to: KNISKYANVWCSIEE*LGTKRINQPARPGF
Trigger: AAACCCAGGTCTGGCTGGCTGATTGATCCTTTTCGTTCCTAACCACTCCTCTATAGAGCACCACACATTTGCATATTTAGATATATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CAA 90 bp AGGCCAGCAGGGTGCCAAGGCCCAAGGAGGCTGTGGGGTGGAGGGTaGGACGGCTGTTTCAGAAGAGACAGGGCCCTTGCCATGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RPAGCQGPRRLWGGG*DGCFRRDRALAMGG
Trigger: CCCACCCATGGCAAGGGCCCTGTCTCTTCTGAAACAGCCGTCCAACCCTCCACCCCACAGCCTCCTTGGGCCTTGGCACCCTGCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR CCA 90 bp TGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTGTGATGGGCCCTTGCCATGGGTaGGGAGGGCCTCCCGCTGGC +
Preference number: 2 (lower is better)
Translates to: WSGNQVGVWSQVTFSPVMGPCHG*GGPPAG
Trigger: GCCAGCGGGAGGCCCTCCCCACCCATGGCAAGGGCC...CATCACAGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR TCA 90 bp GGAAGGGCTGCTAGGCCTGGTTTTTCCCGTGACTCCCAAGGACCTGGACTGAACTCCCGCTGGCAGATATaGCACACAGAAGGCTCCACC +
Preference number: 2 (lower is better)
Translates to: GRAARPGFSRDSQGPGLNSRWQI*HTEGST
Trigger: GGTGGAGCCTTCTGTGTGTCATATCTGCCAGCGGGA...GTTCAGTCCAGGTCCTTGGGAGTCACGGGAAAAACCAGGCCTAGCAGCCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR CCA 90 bp CCTGCCTGCTTCCCCACCCCGTCACCTACTGGGTCACCTACTACTAACCAGCCCCACCATCATCAGCTGTaGGCTGAGGTGCGAGATTGT +
Preference number: 2 (lower is better)
Translates to: PACFPTPSPTGSPTTNQPHHHQL*AEVRDC
Trigger: ACAATCTCGCACCTCAGCCCACAGCTGATGATGGTG...GGGCTGGTTAGTAGTAGGTGACCCAGTAGGTGACGGGGTGGGGAAGCAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR GCA 90 bp CCCCGTCACCTACTGGGTCACCTACTACTAACCAGCCCTCATATGGCACCCGCTGGTTTTAGTCCTGACTaGTGTGTGACCCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: PRHLLGHLLLTSPHMAPAGFSPD*CVTLGK
Trigger: CTTGCCCAGGGTCACACAGCAGTCAGGACTAAAACC...AGCGGGTGCCATATGAGGGCTGGTTAGTAGTAGGTGACCCAGTAGGTGACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR GCA 90 bp GCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTGGCTCCATGCTCTCATaGCAGCAGGTGGCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: AQKRCRCIYMSIGSRLRGGSMLS*QQVALG
Trigger: ACCCAGAGCCACCTGCTGGCATGAGAGCATGGAGCC...ACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491928.1
3UTR-3UTR CCA 90 bp TTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCAGAGAGCTGCTCAGCTaGAAGTCCTCAGCTCCGAAG +
Preference number: 2 (lower is better)
Translates to: FAVRKGGWVVAGFVVASSRELLS*KSSAPK
Trigger: CTTCGGAGCTGAGGACTTCCAGCTGAGCAGCTCTCT...GGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR CAA 90 bp CTCAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTaGTGGTGGCCTCTTCCGGTCCTTGATCTGATTGAAGAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: LRGLQSGKVAGLLLV*WWPLPVLDLIEESC
Trigger: GCAGCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR-3UTR TCA 90 bp TACAGTTGGTACAGCAGACATGATTGCACTCATTTCACAGAACAGGGTCTGAGGGAGATTGTGGAGGCCTaGGGCCAGCAGGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: YSWYSRHDCTHFTEQGLREIVEA*GQQGAK
Trigger: CTTGGCACCCTGCTGGCCTCAGGCCTCCACAATCTC...CCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR TCA 90 bp GCCTGCTTCCCCACCCCGTCACCTACTGGGTCACCTACTACTAACCAGCCCTCATTGGTACAGCAGACATaGTTGCACTCATTTCACAGA +
Preference number: 2 (lower is better)
Translates to: ACFPTPSPTGSPTTNQPSLVQQT*LHSFHR
Trigger: TCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAA...TGAGGGCTGGTTAGTAGTAGGTGACCCAGTAGGTGACGGGGTGGGGAAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR GCA 90 bp CTCAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCGGCTCAGAAACGGTaGAGGTGCATTTACATGTCA +
Preference number: 2 (lower is better)
Translates to: LRGLQSGKVAGLLLVLWWPAQKR*RCIYMS
Trigger: TGACATGTAAATGCACCTGCACCGTTTCTGAGCCGG...CCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644350.1
3UTR-3UTR GCA 90 bp GGCTCAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTCTGATTGAAGAGAGCTaGTCAGCTGGAAGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: GSEVCSQERWLGCCWFCGLIEES*SAGSPQ
Trigger: CTGAGGACTTCCAGCTGAGCAGCTCTCTTCAATCAG...ACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR-3UTR CCA 90 bp GAGGGATGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTTATGGCACCCGCTCATaGGTCACGCCTTTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: EGWSGNQVGVWSQVTFSPYGTRS*VTPLAF
Trigger: AAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATA...AGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CAA 90 bp ACTACTAACCAGCCCTCATATGGCACCCGCTCATGGGTCACGCCTTaGGCTTTTACAAGGGTATACAGTTGGTACAGCAGACATGATTGC +
Preference number: 2 (lower is better)
Translates to: TTNQPSYGTRSWVTP*AFTRVYSWYSRHDC
Trigger: GCAATCATGTCTGCTGTACCAACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATGAGGGCTGGTTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR TCA 90 bp GAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCATTCCGGTCCTTGATCTaGTTGAAGAGAGCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: ETVQVHLHVNRFQAQRFAFRSLI*LKRAAQ
Trigger: CTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAA...TGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR-3UTR GCA 90 bp CTCAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCAGAAACGGTGCAGGTaGATTTACATGTCAATCGGT +
Preference number: 2 (lower is better)
Translates to: LRGLQSGKVAGLLLVLWWQKRCR*IYMSIG
Trigger: ACCGATTGACATGTAAATGCACCTGCACCGTTTCTG...CCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR-3UTR GCA 90 bp TGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTGTGATGCCGGCTCAGAAACGGTaGAGGTGCATTTACATGTCA +
Preference number: 2 (lower is better)
Translates to: WSGNQVGVWSQVTFSPVMPAQKR*RCIYMS
Trigger: TGACATGTAAATGCACCTGCACCGTTTCTGAGCCGG...CATCACAGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR GCA 90 bp GCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTGAACAGAAACGGTGCAGGTaGATTTACATGTCAATCGGT +
Preference number: 2 (lower is better)
Translates to: AGLLLVLWWPLPVLDLIEQKRCR*IYMSIG
Trigger: ACCGATTGACATGTAAATGCACCTGCACCGTTTCTG...TTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR-3UTR CCA 90 bp TACAGTTGGTACAGCAGACATGATTGCACTCATTTCACAGAACAGGGTCTGAGGTCAGCCAGCCAGACCTaGGTTTTAGTCCTGACTGCT +
Preference number: 2 (lower is better)
Translates to: YSWYSRHDCTHFTEQGLRSASQT*VLVLTA
Trigger: AGCAGTCAGGACTAAAACCCAGGTCTGGCTGGCTGA...CCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR GCA 90 bp TGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTGTGATGCAGAAACGGTGCAGGTaGATTTACATGTCAATCGGT +
Preference number: 2 (lower is better)
Translates to: WSGNQVGVWSQVTFSPVMQKRCR*IYMSIG
Trigger: ACCGATTGACATGTAAATGCACCTGCACCGTTTCTG...CATCACAGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CAA 90 bp GTGGCTGGCTCTCCTCAACTGTACAGTGGTGATAAGCATATCATCTaGGCATTATTGTATATGATAAGTAAAATTACACAGATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: VAGSPQLYSGDKHII*ALLYMISKITQIPA
Trigger: AGCTGGAATCTGTGTAATTTTACTTATCATATACAATAATGCCAAGATGATATGCTTATCACCACTGTACAGTTGAGGAGAGCCAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CAA 90 bp TCTCCTCAACTGTACAGTGGTGATAAGCATATCATCTTGGCATTATaGTATATGATAAGTAAAATTACACAGATTCCAGCTACTACAGAG +
Preference number: 2 (lower is better)
Translates to: SPQLYSGDKHIILAL*YMISKITQIPATTE
Trigger: CTCTGTAGTAGCTGGAATCTGTGTAATTTTACTTATCATATACAATAATGCCAAGATGATATGCTTATCACCACTGTACAGTTGAGGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR GCA 72 bp AGGGTTGGACGGCTGTTTCAGAAGAGACAGGGCCCTTaGCATGGGTGGGGAGGGCCTCCCGCTGGCAGATAT +
Preference number: 3 (lower is better)
Translates to: RVGRLFQKRQGP*HGWGGPPAGRY
Trigger: ATATCTGCCAGCGGGAGGCCCTCCCCACCCATGGCAAGGGCCCTGTCTCTTCTGAAACAGCCGTCCAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CCA 72 bp CGGCTGTTTCAGAAGAGACAGGGCCCTTGCCATGGGTaGGGAGGGCCTCCCGCTGGCAGATATGACACACAG +
Preference number: 3 (lower is better)
Translates to: RLFQKRQGPCHG*GGPPAGRYDTQ
Trigger: CTGTGTGTCATATCTGCCAGCGGGAGGCCCTCCCCACCCATGGCAAGGGCCCTGTCTCTTCTGAAACAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR TCA 72 bp GGCCTGGTTTTTCCCGTGACTCCCAAGGACCTGGACTaGACCGGTGGGGCCTGCAGTTCTCATTTCATTCCC +
Preference number: 3 (lower is better)
Translates to: GLVFPVTPKDLD*TGGACSSHFIP
Trigger: GGGAATGAAATGAGAACTGCAGGCCCCACCGGTTCAGTCCAGGTCCTTGGGAGTCACGGGAAAAACCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR-3UTR CAA 90 bp GGAAGCCTCTGGAACTCATGGGAAGGGCTGCTAGGCCTGGTTTTTCCCGTGACTGGAGTGGGAATCAGGTaGGAGTTTGGAGCCAAGTTA +
Preference number: 3 (lower is better)
Translates to: GSLWNSWEGLLGLVFPVTGVGIR*EFGAKL
Trigger: TAACTTGGCTCCAAACTCCAACCTGATTCCCACTCC...AGTCACGGGAAAAACCAGGCCTAGCAGCCCTTCCCATGAGTTCCAGAGGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR TCA 72 bp TGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTaGTTGAAGAGAGCTGCTCAGCTGGAAGTCCTCAGC +
Preference number: 3 (lower is better)
Translates to: CWFCGGLFRSLI*LKRAAQLEVLS
Trigger: GCTGAGGACTTCCAGCTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR GCA 72 bp TCAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTaGTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATC +
Preference number: 3 (lower is better)
Translates to: SEVCSQERWLGC*WFCGGLFRSLI
Trigger: GATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR CCA 72 bp TCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTaGCCTCTTCCGGTCCTTGATCTGATTGAAGAGAGC +
Preference number: 3 (lower is better)
Translates to: SGKVAGLLLVLW*PLPVLDLIEES
Trigger: GCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR CCA 72 bp CAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTaGTGGCCTCTTCCGGTCCTTGATCTGATTGAAGAG +
Preference number: 3 (lower is better)
Translates to: QSGKVAGLLLVL*WPLPVLDLIEE
Trigger: CTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR CCA 72 bp CCTACTACTAACCAGCCCTCATATGGCACCCGCTCATaGGTCACGCCTTTGGCTTTTACAAGGGTATACAGT +
Preference number: 3 (lower is better)
Translates to: PTTNQPSYGTRS*VTPLAFTRVYS
Trigger: ACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATGAGGGCTGGTTAGTAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CCA 72 bp GCAGTGGCTTCTCCAATGTCACATCCTAGTGAGGGATaGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTT +
Preference number: 3 (lower is better)
Translates to: AVASPMSHPSEG*SGNQVGVWSQV
Trigger: AACTTGGCTCCAAACTCCAACCTGATTCCCACTCCATCCCTCACTAGGATGTGACATTGGAGAAGCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR GCA 72 bp GCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTaGAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTT +
Preference number: 3 (lower is better)
Translates to: AFTCQSVPGSEV*SQERWLGCCWF
Trigger: AAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
3UTR TCA 72 bp GGCTTTTACAAGGGTATACAGTTGGTACAGCAGACATaGTTGCACTCATTTCACAGAACAGGGTCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: GFYKGIQLVQQT*LHSFHRTGSEA
Trigger: GGCCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTATACCCTTGTAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR GCA 72 bp TTTACAAGGGTATACAGTTGGTACAGCAGACATGATTaGACTCATTTCACAGAACAGGGTCTGAGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: FTRVYSWYSRHD*THFTEQGLRPG
Trigger: TCCAGGCCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTATACCCTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CCA 72 bp TGGGTCACGCCTTTGGCTTTTACAAGGGTATACAGTTaGTACAGCAGACATGATTGCACTCATTTCACAGAA +
Preference number: 3 (lower is better)
Translates to: WVTPLAFTRVYS*YSRHDCTHFTE
Trigger: TTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CCA 72 bp TCTAAATATGCAAATGTGTGGTGCTCTATAGAGGAGTaGTTAGGAACGAAAAGGATCAATCAGCCAGCCAGA +
Preference number: 3 (lower is better)
Translates to: SKYANVWCSIEE*LGTKRINQPAR
Trigger: TCTGGCTGGCTGATTGATCCTTTTCGTTCCTAACCACTCCTCTATAGAGCACCACACATTTGCATATTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp CAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTTCCCCGAGCGCTaGGCCATGGTGCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: QERWLGCCWFCGGLFRSLIFPER*AMVRPA
Trigger: GGCGGGGCGCACCATGGCGCAGCGCTCGGGGAAGAT...CAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR TCA 90 bp CCCCGTCACCTACTGGGTCACCTACTACTAACCAGCCCTCATATGGCACCCGCTGAGATTGTGGAGGCCTaGGGCCAGCAGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PRHLLGHLLLTSPHMAPAEIVEA*GQQGAK
Trigger: CTTGGCACCCTGCTGGCCTCAGGCCTCCACAATCTC...AGCGGGTGCCATATGAGGGCTGGTTAGTAGTAGGTGACCCAGTAGGTGACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp CCTGCCTGCTTCCCCACCCCGTCACCTACTGGGTCACCTACTACTAACCAGCCCTTACCTTCTCTCCTGTaGTGCCACTCCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PACFPTPSPTGSPTTNQPLPSLL*CHSPAC
Trigger: GCAGGCAGGGGAGTGGCATCACAGGAGAGAAGGTAA...GGGCTGGTTAGTAGTAGGTGACCCAGTAGGTGACGGGGTGGGGAAGCAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp GAGGGATGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTGGCCCTTGCCATGGGTaGGGAGGGCCTCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: EGWSGNQVGVWSQVTFSPGPCHG*GGPPAG
Trigger: GCCAGCGGGAGGCCCTCCCCACCCATGGCAAGGGCC...AGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCATCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp CTTCTAGGGCTCCATGCTCTCATGCCAGCAGGTGGCTCTGGGTATAGCTCCTTCGGAAGTCGGGGTGATTaGAGCAGACCCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LLGLHALMPAGGSGYSSFGSRGD*SRPRLR
Trigger: GCGGAGCCTGGGTCTGCTTCAATCACCCCGACTTCC...GAAGGAGCTATACCCAGAGCCACCTGCTGGCATGAGAGCATGGAGCCCTAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR TCA 90 bp TGGAAGTCCTCAGCTCCGAAGCTTCTAGGGCTCCATGCTCTCATGCCAGCAGGTCGCCGTGCTCCAAGATaGACTGCTGGCCCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: WKSSAPKLLGLHALMPAGRRAPR*TAGPGS
Trigger: ACTTCCGGGGCCAGCAGTTCATCTTGGAGCACGGCG...ACCTGCTGGCATGAGAGCATGGAGCCCTAGAAGCTTCGGAGCTGAGGACTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR GCA 90 bp AGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCCGCTCCCCGATTCCTTaGCACTGTCTGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SQERWLGCCWFCGGLFRSRSPIP*HCLPGL
Trigger: CAGCCCTGGCAGACAGTGGCAAGGAATCGGGGAGCG...GGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR CCA 90 bp CAACATCATCACCATCATCAGCTGTGGGCTGAGGTGCGAGATTGTGGAGGCCTGACCCAGCCCCTGCTCTaGAGGAAGGGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHHHHHQLWAEVRDCGGLTQPLL*RKGLSS
Trigger: GGAGGACAGCCCCTTCCTCCAGAGCAGGGGCTGGGT...CAGGCCTCCACAATCTCGCACCTCAGCCCACAGCTGATGATGGTGATGATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp GAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCACCCAGCCCCTGCTCTaGAGGAAGGGGCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ERWLGCCWFCGGLFRSLITQPLL*RKGLSS
Trigger: GGAGGACAGCCCCTTCCTCCAGAGCAGGGGCTGGGT...GATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR TCA 90 bp TTGAAGAGAGCTGCTCAGCTGGAAGTCCTCAGCTCCGAAGCTTCTAGGGCTCCACCCCGGAAGTCGGGGTaGTTGAAGCAGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LKRAAQLEVLSSEASRAPPRKSG*LKQTQA
Trigger: AGCCTGGGTCTGCTTCAATCACCCCGACTTCCGGGG...TGGAGCCCTAGAAGCTTCGGAGCTGAGGACTTCCAGCTGAGCAGCTCTCTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR GCA 90 bp CTTCCGGTCCTTGATCTGATTGAAGAGAGCTGCTCAGCTGGAAGTCCTCAGCTCCCCGGACAAAAGATTTaGTGGGCCGGCCCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: LPVLDLIEESCSAGSPQLPGQKI*WAGPGA
Trigger: CGCTCCGGGGCCGGCCCAGCAAATCTTTTGTCCGGG...GAGCTGAGGACTTCCAGCTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR GCA 90 bp AAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCATCTTCCCCGAGCGCTaGGCCATGGTGCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KHSPGSETVQVHLHVNRFIFPER*AMVRPA
Trigger: GGCGGGGCGCACCATGGCGCAGCGCTCGGGGAAGAT...GAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR GCA 90 bp CAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGCCCAGTCCGAGAAGCTaGGGAAGTCGCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: QERWLGCCWFCGGLFRSLPSPRS*GSRHSP
Trigger: TGGAGAGTGGCGACTTCCGCAGCTTCTCGGACTGGG...CAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR GCA 90 bp CTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCCTCTTGTGGAGCGACTaGACTCGTGCGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPAQKRCRCIYMSIGSRLLLWSD*TRALWA
Trigger: GGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGAG...GAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR CCA 90 bp GGAAGGGCTGCTAGGCCTGGTTTTTCCCGTGACTCCCAAGGACCTGGACTGAACAAGGAGGCTGTGGGGTaGAGGGTTGGACGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GRAARPGFSRDSQGPGLNKEAVG*RVGRLF
Trigger: AAACAGCCGTCCAACCCTCCACCCCACAGCCTCCTT...GTTCAGTCCAGGTCCTTGGGAGTCACGGGAAAAACCAGGCCTAGCAGCCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp CCTGCCTGCTTCCCCACCCCGTCACCTACTGGGTCACCTACTACTAACCAGCCCTATGGCACCCGCTCATaGGTCACGCCTTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: PACFPTPSPTGSPTTNQPYGTRS*VTPLAF
Trigger: AAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATA...GGGCTGGTTAGTAGTAGGTGACCCAGTAGGTGACGGGGTGGGGAAGCAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp GCTCAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGCCCCGGAAGTCGGGGTaGTTGAAGCAGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AQRFAVRKGGWVVAGFVVPRKSG*LKQTQA
Trigger: AGCCTGGGTCTGCTTCAATCACCCCGACTTCCGGGG...CACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR TCA 90 bp TCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTCCAGGCACTGGCCCGTaGAGTTGCAACCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SGKVAGLLLVLWWPLPVLPGTGP*SCNPRR
Trigger: TCTTCGAGGGTTGCAACTTCACGGGCCAGTGCCTGG...AAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR TCA 90 bp ACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCACCCAAGGACCTGGACTaGACCGGTGGGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TLSRLRNGAGAFTCQSVPPKDLD*TGGACS
Trigger: ACTGCAGGCCCCACCGGTTCAGTCCAGGTCCTTGGG...TGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp ACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCAGTCACTGTCTGCCAGGGCTaGCCCTCGGTCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TVQVHLHVNRFQAQRFAVTVCQG*PSVPPA
Trigger: TGCTGGAGGGACCGAGGGTCAGCCCTGGCAGACAGT...GACTGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR GCA 90 bp CCCCGTCACCTACTGGGTCACCTACTACTAACCAGCCCTCATATGGCACCCGCTAGGTGGCTGGGTTGTTaGTGGTTTTGTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PRHLLGHLLLTSPHMAPARWLGC*WFCGGL
Trigger: GAGGCCACCACAAAACCAGCAACAACCCAGCCACCT...AGCGGGTGCCATATGAGGGCTGGTTAGTAGTAGGTGACCCAGTAGGTGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp AGCTGGAAGTCCTCAGCTCCGAAGCTTCTAGGGCTCCATGCTCTCATGCCAGCAGCTTCTAGGGCTCCATaGTCTCATGCCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SWKSSAPKLLGLHALMPAASRAP*SHASRW
Trigger: CCACCTGCTGGCATGAGAGCATGGAGCCCTAGAAGC...TGCTGGCATGAGAGCATGGAGCCCTAGAAGCTTCGGAGCTGAGGACTTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR CCA 90 bp CAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGCGACAGGAGCCCATGTaGTCACTGTGGCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QERWLGCCWFCGGLFRSLRQEPM*SLWLFQ
Trigger: CTGGAACAGCCACAGTGACCACATGGGCTCCTGTCG...CAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp GGAAGCCTCTGGAACTCATGGGAAGGGCTGCTAGGCCTGGTTTTTCCCGTGACTAGGAACTCCAGGCACTaGCCCGTGAAGTTGCAACCC +
Preference number: 4 (lower is better)
Translates to: GSLWNSWEGLLGLVFPVTRNSRH*PVKLQP
Trigger: GGGTTGCAACTTCACGGGCCAGTGCCTGGAGTTCCT...AGTCACGGGAAAAACCAGGCCTAGCAGCCCTTCCCATGAGTTCCAGAGGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp CATATGGCACCCGCTCATGGGTCACGCCTTTGGCTTTTACAAGGGTATACAGTTGGCCCAAGGAGGCTGTaGGGTGGAGGGTTGGACGGC +
Preference number: 4 (lower is better)
Translates to: HMAPAHGSRLWLLQGYTVGPRRL*GGGLDG
Trigger: GCCGTCCAACCCTCCACCCCACAGCCTCCTTGGGCC...AACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp GGAAGGGCTGCTAGGCCTGGTTTTTCCCGTGACTCCCAAGGACCTGGACTGAACTTCAGGGGAAGCCTCTaGAACTCATGGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRAARPGFSRDSQGPGLNFRGSL*NSWEGL
Trigger: CAGCCCTTCCCATGAGTTCCAGAGGCTTCCCCTGAA...GTTCAGTCCAGGTCCTTGGGAGTCACGGGAAAAACCAGGCCTAGCAGCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp CTGCTCAGCTGGAAGTCCTCAGCTCCGAAGCTTCTAGGGCTCCATGCTCTCATGAGACTCAGCCTTCGGTaGACGGGCCCACTCACCATT +
Preference number: 4 (lower is better)
Translates to: LLSWKSSAPKLLGLHALMRLSLR*TGPLTI
Trigger: AATGGTGAGTGGGCCCGTCCACCGAAGGCTGAGTCT...CATGAGAGCATGGAGCCCTAGAAGCTTCGGAGCTGAGGACTTCCAGCTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR TCA 90 bp CGAAAAGGATCAATCAGCCAGCCAGACCTGGGTTTTAGTCCTGACTGCTGTGTGCCCCGGAAGTCGGGGTaGTTGAAGCAGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RKGSISQPDLGFSPDCCVPRKSG*LKQTQA
Trigger: AGCCTGGGTCTGCTTCAATCACCCCGACTTCCGGGG...CACACAGCAGTCAGGACTAAAACCCAGGTCTGGCTGGCTGATTGATCCTTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp GCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTCGCCGTGCTCCAAGATaGACTGCTGGCCCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: AQKRCRCIYMSIGSRLRGRRAPR*TAGPGS
Trigger: ACTTCCGGGGCCAGCAGTTCATCTTGGAGCACGGCG...ACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTAGAGTGCAGCCCGCCCTaGCCGGGGTCTCCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GMILSKHSPGSETVQVHLECSPP*PGSPCA
Trigger: AGCACAGGGAGACCCCGGGCAGGGCGGGCTGCACTC...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp GGAAGGGCTGCTAGGCCTGGTTTTTCCCGTGACTCCCAAGGACCTGGACTGAACAAGACCTCCAGCTTCTaGCCTGTGAAGTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GRAARPGFSRDSQGPGLNKTSSF*PVKCLP
Trigger: AGGCAAGCACTTCACAGGGCAGAAGCTGGAGGTCTT...GTTCAGTCCAGGTCCTTGGGAGTCACGGGAAAAACCAGGCCTAGCAGCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp TGGAAGTCCTCAGCTCCGAAGCTTCTAGGGCTCCATGCTCTCATGCCAGCAGGTCCAGGCTCAGAGGTTTaGAGTCAGGAAAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WKSSAPKLLGLHALMPAGPGSEV*SQERWL
Trigger: CAGCCACCTTTCCTGACTGCAAACCTCTGAGCCTGG...ACCTGCTGGCATGAGAGCATGGAGCCCTAGAAGCTTCGGAGCTGAGGACTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR CCA 90 bp CTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCGGACAAAAGATTTGCTaGGCCGGCCCCGGAGCGTTA +
Preference number: 4 (lower is better)
Translates to: LPAQKRCRCIYMSIGSRLGQKIC*AGPGAL
Trigger: TAACGCTCCGGGGCCGGCCCAGCAAATCTTTTGTCC...GAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR CCA 90 bp GGAAGCCTCTGGAACTCATGGGAAGGGCTGCTAGGCCTGGTTTTTCCCGTGACTATAAAGCCCCGGTCCTaGAAGTTGTCACAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GSLWNSWEGLLGLVFPVTIKPRS*KLSQSP
Trigger: CGGGGACTGTGACAACTTCCAGGACCGGGGCTTTAT...AGTCACGGGAAAAACCAGGCCTAGCAGCCCTTCCCATGAGTTCCAGAGGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp CTGCTCAGCTGGAAGTCCTCAGCTCCGAAGCTTCTAGGGCTCCATGCTCTCATGATAAAGCCCCGGTCCTaGAAGTTGTCACAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LLSWKSSAPKLLGLHALMIKPRS*KLSQSP
Trigger: CGGGGACTGTGACAACTTCCAGGACCGGGGCTTTAT...CATGAGAGCATGGAGCCCTAGAAGCTTCGGAGCTGAGGACTTCCAGCTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR CCA 90 bp CTGCTCAGCTGGAAGTCCTCAGCTCCGAAGCTTCTAGGGCTCCATGCTCTCATGCCCATGTGGTCACTGTaGCTGTTCCAGCGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLSWKSSAPKLLGLHALMPMWSL*LFQRKK
Trigger: CTTCTTCCGCTGGAACAGCCACAGTGACCACATGGG...CATGAGAGCATGGAGCCCTAGAAGCTTCGGAGCTGAGGACTTCCAGCTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCCACCCCGTCACCTACTGGGTCACCTACTACTAACCAGCCCTCATGCAGTCAGGAAAGGTaGCTGGGTTGTTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ACFPTPSPTGSPTTNQPSCSQER*LGCCWF
Trigger: AAACCAGCAACAACCCAGCCACCTTTCCTGACTGCA...TGAGGGCTGGTTAGTAGTAGGTGACCCAGTAGGTGACGGGGTGGGGAAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp CAACATCATCACCATCATCAGCTGTGGGCTGAGGTGCGAGATTGTGGAGGCCTGACAGGGTCTGAGGCCTaGAGAGGCTTTGGGTTTGCG +
Preference number: 4 (lower is better)
Translates to: QHHHHHQLWAEVRDCGGLTGSEA*RGFGFA
Trigger: CGCAAACCCAAAGCCTCTCCAGGCCTCAGACCCTGT...CAGGCCTCCACAATCTCGCACCTCAGCCCACAGCTGATGATGGTGATGATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp GTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCGGCTCCATGCTCTTGTaGAGCGACTGCACTCGTGCG +
Preference number: 4 (lower is better)
Translates to: VCSQERWLGCCWFCGGLFGSMLL*SDCTRA
Trigger: CGCACGAGTGCAGTCGCTCCACAAGAGCATGGAGCC...GAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR TCA 90 bp CATATGGCACCCGCTCATGGGTCACGCCTTTGGCTTTTACAAGGGTATACAGTTGGAAGTCGGGGTGATTaGAGCAGACCCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HMAPAHGSRLWLLQGYTVGSRGD*SRPRLR
Trigger: GCGGAGCCTGGGTCTGCTTCAATCACCCCGACTTCC...AACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp TGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTGTGATGCGCCGTGCTCCAAGATaGACTGCTGGCCCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: WSGNQVGVWSQVTFSPVMRRAPR*TAGPGS
Trigger: ACTTCCGGGGCCAGCAGTTCATCTTGGAGCACGGCG...CATCACAGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp TGGTGGCCTCTTCCGGTCCTTGATCTGATTGAAGAGAGCTGCTCAGCTGGAAGTGCTCCGCTCTCCACGTaGATGGAGTTCACTCGGTTC +
Preference number: 4 (lower is better)
Translates to: WWPLPVLDLIEESCSAGSAPLST*MEFTRF
Trigger: GAACCGAGTGAACTCCATCCACGTGGAGAGCGGAGC...ACTTCCAGCTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp CAACATCATCACCATCATCAGCTGTGGGCTGAGGTGCGAGATTGTGGAGGCCTGAGAGAGCTGCTCAGCTaGAAGTCCTCAGCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: QHHHHHQLWAEVRDCGGLRELLS*KSSAPK
Trigger: CTTCGGAGCTGAGGACTTCCAGCTGAGCAGCTCTCT...CAGGCCTCCACAATCTCGCACCTCAGCCCACAGCTGATGATGGTGATGATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp GAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCAGAGAGCTGCTCAGCTaGAAGTCCTCAGCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: ERWLGCCWFCGGLFRSLIRELLS*KSSAPK
Trigger: CTTCGGAGCTGAGGACTTCCAGCTGAGCAGCTCTCT...GATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp GGAAGCCTCTGGAACTCATGGGAAGGGCTGCTAGGCCTGGTTTTTCCCGTGACTTGGCTGGGTTGTTGCTaGTTTTGTGGTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSLWNSWEGLLGLVFPVTWLGCC*FCGGLF
Trigger: GAAGAGGCCACCACAAAACCAGCAACAACCCAGCCA...AGTCACGGGAAAAACCAGGCCTAGCAGCCCTTCCCATGAGTTCCAGAGGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp AACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCAGTTGCACTCGTGCGCTGTaGGCCTCCCAGTCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: NGAGAFTCQSVPGSEVCSCTRAL*ASQSEK
Trigger: CTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCA...ACTGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR TCA 90 bp AAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGCCAGCTTCTGCCCTGTaGAGTGCTTGCCTTCATAGA +
Preference number: 4 (lower is better)
Translates to: KVAGLLLVLWWPLPVLDLPASAL*SACLHR
Trigger: TCTATGAAGGCAAGCACTTCACAGGGCAGAAGCTGG...CAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR TCA 90 bp CAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCCCAGCTTCTGCCCTGTaGAGTGCTTGCCTTCATAGA +
Preference number: 4 (lower is better)
Translates to: QRFAVRKGGWVVAGFVVAPASAL*SACLHR
Trigger: TCTATGAAGGCAAGCACTTCACAGGGCAGAAGCTGG...GGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR TCA 90 bp GAGGGATGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTTCCCGCTGGCAGATATaGCACACAGAAGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: EGWSGNQVGVWSQVTFSPSRWQI*HTEGST
Trigger: GGTGGAGCCTTCTGTGTGTCATATCTGCCAGCGGGA...AGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCATCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp CGAAAAGGATCAATCAGCCAGCCAGACCTGGGTTTTAGTCCTGACTGCTGTGTGGCCTGGTTTTTCCCGTaGCTCCCAAGGACCTGGACT +
Preference number: 4 (lower is better)
Translates to: RKGSISQPDLGFSPDCCVAWFFP*LPRTWT
Trigger: AGTCCAGGTCCTTGGGAGTCACGGGAAAAACCAGGC...CACACAGCAGTCAGGACTAAAACCCAGGTCTGGCTGGCTGATTGATCCTTTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp TACAGTTGGTACAGCAGACATGATTGCACTCATTTCACAGAACAGGGTCTGAGGCCCGGACAAAAGATTTaGTGGGCCGGCCCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: YSWYSRHDCTHFTEQGLRPGQKI*WAGPGA
Trigger: CGCTCCGGGGCCGGCCCAGCAAATCTTTTGTCCGGG...CCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp TCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTAAGACCTCCAGCTTCTaGCCTGTGAAGTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SGKVAGLLLVLWWPLPVLKTSSF*PVKCLP
Trigger: AGGCAAGCACTTCACAGGGCAGAAGCTGGAGGTCTT...AAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp CAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTGATTGAAGAGAGCTaGTCAGCTGGAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QSGKVAGLLLVLWWPLPVLIEES*SAGSPQ
Trigger: CTGAGGACTTCCAGCTGAGCAGCTCTCTTCAATCAG...GACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp GTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTAGGTGGCTGGGTTGTTaGTGGTTTTGTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VAGLLLVLWWPLPVLDLIRWLGC*WFCGGL
Trigger: GAGGCCACCACAAAACCAGCAACAACCCAGCCACCT...AATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp ACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCATCTCCACCACGTACATaGGGCCGTGGTAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLSRLRNGAGAFTCQSVPSPPRT*GRGSWA
Trigger: AGCCCAACTACCACGGCCGCATGTACGTGGTGGAGA...TGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR GCA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTAGAGCGACTGCACTCGTaGGCTGTGGGCCTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: GMILSKHSPGSETVQVHLERLHS*AVGLPV
Trigger: GACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTC...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR GCA 90 bp GAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCAGGCTCCATGCTCTCATaGCAGCAGGTGGCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ETVQVHLHVNRFQAQRFAGSMLS*QQVALG
Trigger: ACCCAGAGCCACCTGCTGGCATGAGAGCATGGAGCC...TGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR CCA 90 bp CTTCCGGTCCTTGATCTGATTGAAGAGAGCTGCTCAGCTGGAAGTCCTCAGCTCATAAAGCCCCGGTCCTaGAAGTTGTCACAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LPVLDLIEESCSAGSPQLIKPRS*KLSQSP
Trigger: CGGGGACTGTGACAACTTCCAGGACCGGGGCTTTAT...GAGCTGAGGACTTCCAGCTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp GCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTCGACAGGAGCCCATGTaGTCACTGTGGCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: AQKRCRCIYMSIGSRLRGRQEPM*SLWLFQ
Trigger: CTGGAACAGCCACAGTGACCACATGGGCTCCTGTCG...ACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp GTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTGAAGAGAGCTGCTCAGCTAGGAACTCCAGGCACTaGCCCGTGAAGTTGCAACCC +
Preference number: 4 (lower is better)
Translates to: VLWWPLPVLDLIEESCSARNSRH*PVKLQP
Trigger: GGGTTGCAACTTCACGGGCCAGTGCCTGGAGTTCCT...AGCTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR CCA 90 bp AGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGTTGCTGGTTTTGTaGTGGCCTCTTCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SQERWLGCCWFCGGLFRSLLLVL*WPLPVL
Trigger: AAGGACCGGAAGAGGCCACCACAAAACCAGCAACAA...GGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp AGAGAGCTGCTCAGCTGGAAGTCCTCAGCTCCGAAGCTTCTAGGGCTCCATGCTTGCAGTCAGGAAAGGTaGCTGGGTTGTTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RELLSWKSSAPKLLGLHACSQER*LGCCWF
Trigger: AAACCAGCAACAACCCAGCCACCTTTCCTGACTGCA...AGCATGGAGCCCTAGAAGCTTCGGAGCTGAGGACTTCCAGCTGAGCAGCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491928.1
3UTR CAA 72 bp CTCAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTaGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LRGLQSGKVAGL*LVLWWPLPVLD
Trigger: ATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR TCA 90 bp ACCCTGGGCAAGTTGCTTAACCTGTCTGTGGCTGGCTCTCCTCAACTGTACAGTCCAGCTTCTGCCCTGTaGAGTGCTTGCCTTCATAGA +
Preference number: 4 (lower is better)
Translates to: TLGKLLNLSVAGSPQLYSPASAL*SACLHR
Trigger: TCTATGAAGGCAAGCACTTCACAGGGCAGAAGCTGG...ACTGTACAGTTGAGGAGAGCCAGCCACAGACAGGTTAAGCAACTTGCCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp GTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGTCCCCGTACACCTTaGTGGTGTTCACACAGTTCT +
Preference number: 4 (lower is better)
Translates to: VCSQERWLGCCWFCGGLFRPRTP*WCSHSS
Trigger: AGAACTGTGTGAACACCATCAAGGTGTACGGGGACG...GAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR GCA 90 bp TTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCAAGACCTCCAGCTTCTaGCCTGTGAAGTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: FAVRKGGWVVAGFVVASSKTSSF*PVKCLP
Trigger: AGGCAAGCACTTCACAGGGCAGAAGCTGGAGGTCTT...GGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp ACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCAGTCAGGTGGCTGGGTTGTTaGTGGTTTTGTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TVQVHLHVNRFQAQRFAVRWLGC*WFCGGL
Trigger: GAGGCCACCACAAAACCAGCAACAACCCAGCCACCT...GACTGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp GAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCCCGGCTCAGAAACGGTaGAGGTGCATTTACATGTCA +
Preference number: 4 (lower is better)
Translates to: ERWLGCCWFCGGLFRSLIPAQKR*RCIYMS
Trigger: TGACATGTAAATGCACCTGCACCGTTTCTGAGCCGG...GATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR CCA 90 bp CATATGGCACCCGCTCATGGGTCACGCCTTTGGCTTTTACAAGGGTATACAGTTGCTCCGCTCTCCACGTaGATGGAGTTCACTCGGTTC +
Preference number: 4 (lower is better)
Translates to: HMAPAHGSRLWLLQGYTVAPLST*MEFTRF
Trigger: GAACCGAGTGAACTCCATCCACGTGGAGAGCGGAGC...AACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp AACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCAGTGCTCCGCTCTCCACGTaGATGGAGTTCACTCGGTTC +
Preference number: 4 (lower is better)
Translates to: NGAGAFTCQSVPGSEVCSAPLST*MEFTRF
Trigger: GAACCGAGTGAACTCCATCCACGTGGAGAGCGGAGC...ACTGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp GGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTGAAGAGCCCATGTGGTCACTGTaGCTGTTCCAGCGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GLLLVLWWPLPVLDLIEEPMWSL*LFQRKK
Trigger: CTTCTTCCGCTGGAACAGCCACAGTGACCACATGGG...CTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp TGGTGGCCTCTTCCGGTCCTTGATCTGATTGAAGAGAGCTGCTCAGCTGGAAGTTGGCTGGGTTGTTGCTaGTTTTGTGGTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WWPLPVLDLIEESCSAGSWLGCC*FCGGLF
Trigger: GAAGAGGCCACCACAAAACCAGCAACAACCCAGCCA...ACTTCCAGCTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp CAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCGTCAGGAAAGGTGGCTaGGTTGTTGCTGGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: QRFAVRKGGWVVAGFVVAVRKGG*VVAGFV
Trigger: CACAAAACCAGCAACAACCCAGCCACCTTTCCTGAC...GGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp AGATTCCAGCTACTACAGAGCCTGGCATTAAGTCAGTGCTCCATAAATATTCATACAGGGCCCTTGCCATaGGTGGGGAGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RFQLLQSLALSQCSINIHTGPLP*VGRASR
Trigger: GCGGGAGGCCCTCCCCACCCATGGCAAGGGCCCTGT...ATGAATATTTATGGAGCACTGACTTAATGCCAGGCTCTGTAGTAGCTGGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp ATATGGCACCCGCTCATGGGTCACGCCTTTGGCTTTTACAAGGGTATACAGTTGAGCCTCTGGAACTCATaGGAAGGGCTGCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IWHPLMGHAFGFYKGIQLSLWNS*EGLLGL
Trigger: CAGGCCTAGCAGCCCTTCCCATGAGTTCCAGAGGCT...CAACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CAA 72 bp CAGCCCTCATATGGCACCCGCTCATGGGTCACGCCTTaGGCTTTTACAAGGGTATACAGTTGGTACAGCAGA +
Preference number: 4 (lower is better)
Translates to: QPSYGTRSWVTP*AFTRVYSWYSR
Trigger: TCTGCTGTACCAACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATGAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp ACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCACGTCCCCGTACACCTTaGTGGTGTTCACACAGTTCT +
Preference number: 4 (lower is better)
Translates to: TLSRLRNGAGAFTCQSVPRPRTP*WCSHSS
Trigger: AGAACTGTGTGAACACCATCAAGGTGTACGGGGACG...TGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR TCA 90 bp CAGGCTCAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGTTCCGGTCCTTGATCTaGTTGAAGAGAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QAQRFAVRKGGWVVAGFVFRSLI*LKRAAQ
Trigger: CTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAA...CACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR TCA 90 bp GTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTTTCCGGTCCTTGATCTaGTTGAAGAGAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VAGLLLVLWWPLPVLDLIFRSLI*LKRAAQ
Trigger: CTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAA...AATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp GAGGGATGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTCGGAAATGTTCTCCGTaGATTCCTACAGGCCGACAG +
Preference number: 4 (lower is better)
Translates to: EGWSGNQVGVWSQVTFSPRKCSP*IPTGRQ
Trigger: CTGTCGGCCTGTAGGAATGCACGGAGAACATTTCCG...AGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCATCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp GTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTCTGATTGAAGAGAGCTaGTCAGCTGGAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VAGLLLVLWWPLPVLDLILIEES*SAGSPQ
Trigger: CTGAGGACTTCCAGCTGAGCAGCTCTCTTCAATCAG...AATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp GAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCACCAGGCTCAGAGGTTTaGAGTCAGGAAAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ETVQVHLHVNRFQAQRFAPGSEV*SQERWL
Trigger: CAGCCACCTTTCCTGACTGCAAACCTCTGAGCCTGG...TGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp CTTCTAGGGCTCCATGCTCTCATGCCAGCAGGTGGCTCTGGGTATAGCTCCTTCCAGAAACGGTGCAGGTaGATTTACATGTCAATCGGT +
Preference number: 4 (lower is better)
Translates to: LLGLHALMPAGGSGYSSFQKRCR*IYMSIG
Trigger: ACCGATTGACATGTAAATGCACCTGCACCGTTTCTG...GAAGGAGCTATACCCAGAGCCACCTGCTGGCATGAGAGCATGGAGCCCTAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR CCA 90 bp ACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCAGTCTGGCTGGGTTGTTGCTaGTTTTGTGGTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TVQVHLHVNRFQAQRFAVWLGCC*FCGGLF
Trigger: GAAGAGGCCACCACAAAACCAGCAACAACCCAGCCA...GACTGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp GTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTTGCAGTCAGGAAAGGTaGCTGGGTTGTTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: VAGLLLVLWWPLPVLDLICSQER*LGCCWF
Trigger: AAACCAGCAACAACCCAGCCACCTTTCCTGACTGCA...AATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp CACACAGCAGTGGCTTCTCCAATGTCACATCCTAGTGAGGGATGGAGTGGGAATCACCATCATCAGCTGTaGGCTGAGGTGCGAGATTGT +
Preference number: 4 (lower is better)
Translates to: HTAVASPMSHPSEGWSGNHHHQL*AEVRDC
Trigger: ACAATCTCGCACCTCAGCCCACAGCTGATGATGGTG...ATTCCCACTCCATCCCTCACTAGGATGTGACATTGGAGAAGCCACTGCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp GAGGGATGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTTCAGCCAGCCAGACCTaGGTTTTAGTCCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: EGWSGNQVGVWSQVTFSPSASQT*VLVLTA
Trigger: AGCAGTCAGGACTAAAACCCAGGTCTGGCTGGCTGA...AGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp TTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCCAGGCACTGGCCCGTaGAGTTGCAACCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LSKHSPGSETVQVHLHVNPGTGP*SCNPRR
Trigger: TCTTCGAGGGTTGCAACTTCACGGGCCAGTGCCTGG...ATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR CCA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTAGGACAAAAGATTTGCTaGGCCGGCCCCGGAGCGTTA +
Preference number: 4 (lower is better)
Translates to: GMILSKHSPGSETVQVHLGQKIC*AGPGAL
Trigger: TAACGCTCCGGGGCCGGCCCAGCAAATCTTTTGTCC...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR CCA 90 bp ACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCATTGTTGCTGGTTTTGTaGTGGCCTCTTCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TLSRLRNGAGAFTCQSVPLLLVL*WPLPVL
Trigger: AAGGACCGGAAGAGGCCACCACAAAACCAGCAACAA...TGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR CCA 90 bp TTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATTGCGGCCGTGGTAGTTaGGCTCCTCATACAGGACCC +
Preference number: 4 (lower is better)
Translates to: LSKHSPGSETVQVHLHVNCGRGS*APHTGP
Trigger: GGGTCCTGTATGAGGAGCCCAACTACCACGGCCGCA...ATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644350.1
3UTR CAA 72 bp TTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTaGTGGTGGCCTCTTCCGGTCCTTGATCTGATTGAA +
Preference number: 4 (lower is better)
Translates to: LQSGKVAGLLLV*WWPLPVLDLIE
Trigger: TTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp TTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCCAGAAACGGTGCAGGTaGATTTACATGTCAATCGGT +
Preference number: 4 (lower is better)
Translates to: FAVRKGGWVVAGFVVASSQKRCR*IYMSIG
Trigger: ACCGATTGACATGTAAATGCACCTGCACCGTTTCTG...GGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CCA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACCCATGTGGTCACTGTaGCTGTTCCAGCGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GMILSKHSPGSETVQVHLPMWSL*LFQRKK
Trigger: CTTCTTCCGCTGGAACAGCCACAGTGACCACATGGG...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR CCA 90 bp TGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTGTGATGTTGTTGCTGGTTTTGTaGTGGCCTCTTCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: WSGNQVGVWSQVTFSPVMLLLVL*WPLPVL
Trigger: AAGGACCGGAAGAGGCCACCACAAAACCAGCAACAA...CATCACAGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp CAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGGTCAGGAAAGGTGGCTaGGTTGTTGCTGGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: QKRCRCIYMSIGSRLRGLVRKGG*VVAGFV
Trigger: CACAAAACCAGCAACAACCCAGCCACCTTTCCTGAC...CAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR GCA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACGGAAATGTTCTCCGTaGATTCCTACAGGCCGACAG +
Preference number: 4 (lower is better)
Translates to: GMILSKHSPGSETVQVHLRKCSP*IPTGRQ
Trigger: CTGTCGGCCTGTAGGAATGCACGGAGAACATTTCCG...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR GCA 90 bp TACAGTTGGTACAGCAGACATGATTGCACTCATTTCACAGAACAGGGTCTGAGGGGTTTTAGTCCTGACTaGTGTGTGACCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: YSWYSRHDCTHFTEQGLRGFSPD*CVTLGK
Trigger: CTTGCCCAGGGTCACACAGCAGTCAGGACTAAAACC...CCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp CATATGGCACCCGCTCATGGGTCACGCCTTTGGCTTTTACAAGGGTATACAGTTGAGTGGGAATCAGGTTaGAGTTTGGAGCCAAGTTAC +
Preference number: 4 (lower is better)
Translates to: HMAPAHGSRLWLLQGYTVEWESG*SLEPSY
Trigger: GTAACTTGGCTCCAAACTCCAACCTGATTCCCACTC...AACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTATTCCGGTCCTTGATCTaGTTGAAGAGAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GMILSKHSPGSETVQVHLFRSLI*LKRAAQ
Trigger: CTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAA...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR GCA 90 bp TACAGTTGGTACAGCAGACATGATTGCACTCATTTCACAGAACAGGGTCTGAGGCTGATTGAAGAGAGCTaGTCAGCTGGAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YSWYSRHDCTHFTEQGLRLIEES*SAGSPQ
Trigger: CTGAGGACTTCCAGCTGAGCAGCTCTCTTCAATCAG...CCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp AGATTCCAGCTACTACAGAGCCTGGCATTAAGTCAGTGCTCCATAAATATTCATCGACAGGAGCCCATGTaGTCACTGTGGCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RFQLLQSLALSQCSINIHRQEPM*SLWLFQ
Trigger: CTGGAACAGCCACAGTGACCACATGGGCTCCTGTCG...ATGAATATTTATGGAGCACTGACTTAATGCCAGGCTCTGTAGTAGCTGGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR TCA 90 bp AAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCTTGGTACAGCAGACATaGTTGCACTCATTTCACAGA +
Preference number: 4 (lower is better)
Translates to: KHSPGSETVQVHLHVNRFLVQQT*LHSFHR
Trigger: TCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAA...GAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp AGATTCCAGCTACTACAGAGCCTGGCATTAAGTCAGTGCTCCATAAATATTCATCCAGGCTCAGAGGTTTaGAGTCAGGAAAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RFQLLQSLALSQCSINIHPGSEV*SQERWL
Trigger: CAGCCACCTTTCCTGACTGCAAACCTCTGAGCCTGG...ATGAATATTTATGGAGCACTGACTTAATGCCAGGCTCTGTAGTAGCTGGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp ATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCCCGGCTCAGAAACGGTaGAGGTGCATTTACATGTCA +
Preference number: 4 (lower is better)
Translates to: ILSKHSPGSETVQVHLHVPAQKR*RCIYMS
Trigger: TGACATGTAAATGCACCTGCACCGTTTCTGAGCCGG...GACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR GCA 90 bp ACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCATATGCAAATGTGTGGTaGTCTATAGAGGAGTGGTTA +
Preference number: 4 (lower is better)
Translates to: TLSRLRNGAGAFTCQSVPYANVW*SIEEWL
Trigger: TAACCACTCCTCTATAGAGCACCACACATTTGCATA...TGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp CACACAGCAGTGGCTTCTCCAATGTCACATCCTAGTGAGGGATGGAGTGGGAATTACAGCAGACATGATTaGACTCATTTCACAGAACAG +
Preference number: 4 (lower is better)
Translates to: HTAVASPMSHPSEGWSGNYSRHD*THFTEQ
Trigger: CTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTA...ATTCCCACTCCATCCCTCACTAGGATGTGACATTGGAGAAGCCACTGCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp TTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATGTCAGGAAAGGTGGCTaGGTTGTTGCTGGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: LSKHSPGSETVQVHLHVNVRKGG*VVAGFV
Trigger: CACAAAACCAGCAACAACCCAGCCACCTTTCCTGAC...ATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR CCA 90 bp CATATGGCACCCGCTCATGGGTCACGCCTTTGGCTTTTACAAGGGTATACAGTTAAATATGCAAATGTGTaGTGCTCTATAGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: HMAPAHGSRLWLLQGYTVKYANV*CSIEEW
Trigger: CCACTCCTCTATAGAGCACCACACATTTGCATATTT...AACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGGGTCACGCCTTTaGCTTTTACAAGGGTATACA +
Preference number: 4 (lower is better)
Translates to: GMILSKHSPGSETVQVHLHGSRL*LLQGYT
Trigger: TGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATG...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp AGATTCCAGCTACTACAGAGCCTGGCATTAAGTCAGTGCTCCATAAATATTCATCATCCTAGTGAGGGATaGAGTGGGAATCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RFQLLQSLALSQCSINIHHPSEG*SGNQVG
Trigger: TCCAACCTGATTCCCACTCCATCCCTCACTAGGATG...ATGAATATTTATGGAGCACTGACTTAATGCCAGGCTCTGTAGTAGCTGGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
3UTR CAA 72 bp CATTTCACAGAACAGGGTCTGAGGCCTGGAGAGGCTTaGGGTTTGCGCCAAATTCATGACAAAAATATATCT +
Preference number: 4 (lower is better)
Translates to: HFTEQGLRPGEA*GLRQIHDKNIS
Trigger: AGATATATTTTTGTCATGAATTTGGCGCAAACCCAAAGCCTCTCCAGGCCTCAGACCCTGTTCTGTGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CCA 90 bp TTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATAATCAGGTTGGAGTTTaGAGCCAAGTTACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSKHSPGSETVQVHLHVNNQVGV*SQVTFS
Trigger: AGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATT...ATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR GCA 90 bp TACAGTTGGTACAGCAGACATGATTGCACTCATTTCACAGAACAGGGTCTGAGGCTGGCATTAAGTCAGTaGTCCATAAATATTCATCAA +
Preference number: 4 (lower is better)
Translates to: YSWYSRHDCTHFTEQGLRLALSQ*SINIHQ
Trigger: TTGATGAATATTTATGGAGCACTGACTTAATGCCAG...CCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS CCA 90 bp GTTAGTGCTGTCGGGCGTGCTAAGCCCGAGGGGCCACCAGGCGGTTaGGACCCGCCGCGGCCACCCTGTGCCACCGCGAGTGCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: VSAVGRAKPEGPPGG*DPPRPPCATASAAR
Trigger: GCGGGCTGCACTCGCGGTGGCACAGGGTGGCCGCGGCGGGTCCCAACCGCCTGGTGGCCCCTCGGGCTTAGCACGCCCGACAGCACTAAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS TCA 90 bp AGCTGCGCCCGGCCATCCCGGTGGGAGGGCTCGGCTGGAAGAAGTTaGCCACCTTGTGGAGCGACTGCACTCGTGCGCTGTGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SCARPSRWEGSAGRS*PPCGATALVRCGPP
Trigger: GGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCACCGGGATGGCCGGGCGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS GCA 90 bp ACGCCAGGCCAGGTCAGGCCTCCCTCCTCCCGCTCTCTTCCTGCCTaGCTCCCTCCCTGGCACTCTCCCTCCCTGGGTCCCTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: TPGQVRPPSSRSLPA*LPPWHSPSLGPSLL
Trigger: AAGGAGAGAGGGACCCAGGGAGGGAGAGTGCCAGGGAGGGAGGCAGGCAGGAAGAGAGCGGGAGGAGGGAGGCCTGACCTGGCCTGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476631.5
CDS GCA 90 bp CAAAACGCCAGGCCAGGTCAGGCCTCCCTCCTCCCGCTCTCTTCCTaGCTGCCTCCCTCCCTGGCACTCTCCCTCCCTGGGTCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: QNARPGQASLLPLSS*LPPSLALSLPGSLS
Trigger: AGAGAGGGACCCAGGGAGGGAGAGTGCCAGGGAGGGAGGCAGGCAGGAAGAGAGCGGGAGGAGGGAGGCCTGACCTGGCCTGGCGTTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476631.5
CDS CCA 90 bp CTGTCCCCAGAGCTGCGCCCGGCCATCCCGGTGGGAGGGCTCGGCTaGAAGAAGTTGACCACCTTGTGGAGCGACTGCACTCGTGCGCTG +
Preference number: 5 (lower is better)
Translates to: LSPELRPAIPVGGLG*KKLTTLWSDCTRAL
Trigger: CAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCACCGGGATGGCCGGGCGCAGCTCTGGGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CCA 90 bp GGGAGTCCGGGAAAGCGCCCTGGATCATCCAGCTCCTCCCAGGGCTaGGATGCCCACTGCCGAGAGAGCACTCAGAAGCCGCCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: GSPGKRPGSSSSSQG*DAHCRESTQKPPVG
Trigger: GCCAACGGGCGGCTTCTGAGTGCTCTCTCGGCAGTGGGCATCCCAGCCCTGGGAGGAGCTGGATGATCCAGGGCGCTTTCCCGGACTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS TCA 90 bp CGGGAGGACCACGCTCCCCGATTCCTTGCCACTGTCTGCCAGGGCTaGCCCTCGGTCCCTCCAGCAGGAAGACTCAGCCTTCGGTGGACG +
Preference number: 5 (lower is better)
Translates to: REDHAPRFLATVCQG*PSVPPAGRLSLRWT
Trigger: CGTCCACCGAAGGCTGAGTCTTCCTGCTGGAGGGACCGAGGGTCAGCCCTGGCAGACAGTGGCAAGGAATCGGGGAGCGTGGTCCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476631.5
ENST00000491928.1
CDS GCA 90 bp GGTGACCCGCGCTGCCCTGAGCTGGGGGTACAGTGCTCTGCCCCTTaGCTCTCTGCTGCACCAACTAAGCCACCCTGGACGCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: GDPRCPELGVQCSAP*LSAAPTKPPWTPRI
Trigger: GATCCTGGGCGTCCAGGGTGGCTTAGTTGGTGCAGCAGAGAGGCAAGGGGCAGAGCACTGTACCCCCAGCTCAGGGCAGCGCGGGTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476631.5
CDS GCA 90 bp GGAGCGACTGCACTCGTGCGCTGTGGGCCTCCCAGTCCGAGAAGCTaGGGAAGTCGCCACTCTCCACCACGTACATGCGGCCGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: GATALVRCGPPSPRS*GSRHSPPRTCGRGS
Trigger: ACTACCACGGCCGCATGTACGTGGTGGAGAGTGGCGACTTCCGCAGCTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478106.2
ENST00000644350.1
CDS CCA 90 bp GCCATCCCGGTGGGAGGGCTCGGCTGGAAGAAGTTGACCACCTTGTaGAGCGACTGCACTCGTGCGCTGTGGGCCTCCCAGTCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: AIPVGGLGWKKLTTL*SDCTRALWASQSEK
Trigger: CTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCACCGGGATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS GCA 90 bp GTGGGAGGGCTCGGCTGGAAGAAGTTGACCACCTTGTGGAGCGACTaGACTCGTGCGCTGTGGGCCTCCCAGTCCGAGAAGCTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: VGGLGWKKLTTLWSD*TRALWASQSEKLRK
Trigger: CTTCCGCAGCTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS TCA 90 bp GGATGCCCACTGCCGAGAGAGCACTCAGAAGCCGCCCGTTGGCTTTaGGGACTTTTATCGCCCAAGGTCCCGAGGTCTGGGTGGGACCGC +
Preference number: 5 (lower is better)
Translates to: GCPLPREHSEAARWL*GLLSPKVPRSGWDR
Trigger: GCGGTCCCACCCAGACCTCGGGACCTTGGGCGATAAAAGTCCTCAAAGCCAACGGGCGGCTTCTGAGTGCTCTCTCGGCAGTGGGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS GCA 90 bp CCCAGTCCGAGAAGCTGCGGAAGTCGCCACTCTCCACCACGTACATaGGGCCGTGGTAGTTGGGCTCCTCATACAGGACCCACGCTCCGT +
Preference number: 5 (lower is better)
Translates to: PSPRSCGSRHSPPRT*GRGSWAPHTGPTLR
Trigger: ACGGAGCGTGGGTCCTGTATGAGGAGCCCAACTACCACGGCCGCATGTACGTGGTGGAGAGTGGCGACTTCCGCAGCTTCTCGGACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478106.2
ENST00000644350.1
CDS GCA 90 bp GCTCGGCTGGAAGAAGTTGACCACCTTGTGGAGCGACTGCACTCGTaGGCTGTGGGCCTCCCAGTCCGAGAAGCTGCGGAAGTCGCCACT +
Preference number: 5 (lower is better)
Translates to: ARLEEVDHLVERLHS*AVGLPVREAAEVAT
Trigger: AGTGGCGACTTCCGCAGCTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS GCA 90 bp AAGCGCCCTGGATCATCCAGCTCCTCCCAGGGCTGGGATGCCCACTaGCGAGAGAGCACTCAGAAGCCGCCCGTTGGCTTTGAGGACTTT +
Preference number: 5 (lower is better)
Translates to: KRPGSSSSSQGWDAH*RESTQKPPVGFEDF
Trigger: AAAGTCCTCAAAGCCAACGGGCGGCTTCTGAGTGCTCTCTCGGCAGTGGGCATCCCAGCCCTGGGAGGAGCTGGATGATCCAGGGCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CCA 90 bp TGGAAGAAGTTGACCACCTTGTGGAGCGACTGCACTCGTGCGCTGTaGGCCTCCCAGTCCGAGAAGCTGCGGAAGTCGCCACTCTCCACC +
Preference number: 5 (lower is better)
Translates to: WKKLTTLWSDCTRAL*ASQSEKLRKSPLST
Trigger: GGTGGAGAGTGGCGACTTCCGCAGCTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS GCA 90 bp GTCTTACAGACTTTAAAGCCGGGAGGACCACGCTCCCCGATTCCTTaGCACTGTCTGCCAGGGCTGACCCTCGGTCCCTCCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VLQTLKPGGPRSPIP*HCLPGLTLGPSSRK
Trigger: CTTCCTGCTGGAGGGACCGAGGGTCAGCCCTGGCAGACAGTGGCAAGGAATCGGGGAGCGTGGTCCTCCCGGCTTTAAAGTCTGTAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476631.5
ENST00000491928.1
CDS-3UTR CAA 90 bp GCCTGCTTCCCCACCCCGTCACCTACTGGGTCACCTACTACTAACCAGCCCTCAAAGGTGGCTGGGTTGTaGCTGGTTTTGTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: ACFPTPSPTGSPTTNQPSKVAGL*LVLWWP
Trigger: AGGCCACCACAAAACCAGCAACAACCCAGCCACCTT...TGAGGGCTGGTTAGTAGTAGGTGACCCAGTAGGTGACGGGGTGGGGAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CAA 90 bp GTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTCCCCGGTCCTGGAAGTaGTCACAGTCCCCGAAGACC +
Preference number: 5 (lower is better)
Translates to: VAGLLLVLWWPLPVLDLIPRSWK*SQSPKT
Trigger: GGTCTTCGGGGACTGTGACAACTTCCAGGACCGGGG...AATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CAA 90 bp GGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTGAAGAGACGCTCCCCGATTCCTaGCCACTGTCTGCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GLLLVLWWPLPVLDLIEETLPDS*PLSARA
Trigger: AGCCCTGGCAGACAGTGGCAAGGAATCGGGGAGCGT...CTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491928.1
CDS-3UTR CAA 90 bp GAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCACCCCGGTCCTGGAAGTaGTCACAGTCCCCGAAGACC +
Preference number: 5 (lower is better)
Translates to: ETVQVHLHVNRFQAQRFAPRSWK*SQSPKT
Trigger: GGTCTTCGGGGACTGTGACAACTTCCAGGACCGGGG...TGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CAA 90 bp CTCAGAGGTTTGCAGTCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGGGGTTGTTGCTGGTTTaGTGGTGGCCTCTTCCGGTC +
Preference number: 5 (lower is better)
Translates to: LRGLQSGKVAGLLLVLWWGLLLV*WWPLPV
Trigger: GACCGGAAGAGGCCACCACAAAACCAGCAACAACCC...CCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGACTGCAAACCTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CAA 90 bp TCAGGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGGAAAGGTGGCTGGGTaGTTGCTGGTTTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SGKVAGLLLVLWWPLPVLGKVAG*LLVLWW
Trigger: CCACCACAAAACCAGCAACAACCCAGCCACCTTTCC...AAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CAA 90 bp GGAAAGGTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATGGAAAGGTGGCTGGGTaGTTGCTGGTTTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GKVAGLLLVLWWPLPVLDGKVAG*LLVLWW
Trigger: CCACCACAAAACCAGCAACAACCCAGCCACCTTTCC...ATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCACCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CAA 90 bp TTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTGAAGAGAGCTGCTCAGCTGGACCGTCCCCGTACACCTaGATGGTGTTCACACAGTTC +
Preference number: 5 (lower is better)
Translates to: LWWPLPVLDLIEESCSAGPSPYT*MVFTQF
Trigger: GAACTGTGTGAACACCATCAAGGTGTACGGGGACGG...TCCAGCTGAGCAGCTCTCTTCAATCAGATCAAGGACCGGAAGAGGCCACCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS-3UTR CAA 90 bp GTGGCTGGGTTGTTGCTGGTTTTGTGGTGGCCTCTTCCGGTCCTTGATCTGATTAAGGTGGCTGGGTTGTaGCTGGTTTTGTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: VAGLLLVLWWPLPVLDLIKVAGL*LVLWWP
Trigger: AGGCCACCACAAAACCAGCAACAACCCAGCCACCTT...AATCAGATCAAGGACCGGAAGAGGCCACCACAAAACCAGCAACAACCCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CAA 90 bp TACAGTTGGTACAGCAGACATGATTGCACTCATTTCACAGAACAGGGTCTGAGGCCCCGGTCCTGGAAGTaGTCACAGTCCCCGAAGACC +
Preference number: 5 (lower is better)
Translates to: YSWYSRHDCTHFTEQGLRPRSWK*SQSPKT
Trigger: GGTCTTCGGGGACTGTGACAACTTCCAGGACCGGGG...CCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CAA 90 bp GAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCAGGGTTGTTGCTGGTTTaGTGGTGGCCTCTTCCGGTC +
Preference number: 5 (lower is better)
Translates to: ETVQVHLHVNRFQAQRFAGLLLV*WWPLPV
Trigger: GACCGGAAGAGGCCACCACAAAACCAGCAACAACCC...TGCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CAA 90 bp CACACAGCAGTGGCTTCTCCAATGTCACATCCTAGTGAGGGATGGAGTGGGAATGGAAAGGTGGCTGGGTaGTTGCTGGTTTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HTAVASPMSHPSEGWSGNGKVAG*LLVLWW
Trigger: CCACCACAAAACCAGCAACAACCCAGCCACCTTTCC...ATTCCCACTCCATCCCTCACTAGGATGTGACATTGGAGAAGCCACTGCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CAA 90 bp GAGGGATGGAGTGGGAATCAGGTTGGAGTTTGGAGCCAAGTTACCTTCTCTCCTCACTGGCCCGTGAAGTaGCAACCCTCGAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: EGWSGNQVGVWSQVTFSPHWPVK*QPSKIS
Trigger: AGAAATCTTCGAGGGTTGCAACTTCACGGGCCAGTG...AGGAGAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTCCCACTCCATCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CAA 90 bp CATATGGCACCCGCTCATGGGTCACGCCTTTGGCTTTTACAAGGGTATACAGTTCCGTCCCCGTACACCTaGATGGTGTTCACACAGTTC +
Preference number: 5 (lower is better)
Translates to: HMAPAHGSRLWLLQGYTVPSPYT*MVFTQF
Trigger: GAACTGTGTGAACACCATCAAGGTGTACGGGGACGG...AACTGTATACCCTTGTAAAAGCCAAAGGCGTGACCCATGAGCGGGTGCCATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CAA 90 bp AGAAACGGTGCAGGTGCATTTACATGTCAATCGGTTCCAGGCTCAGAGGTTTGCAAGGTGGCTGGGTTGTaGCTGGTTTTGTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: RNGAGAFTCQSVPGSEVCKVAGL*LVLWWP
Trigger: AGGCCACCACAAAACCAGCAACAACCCAGCCACCTT...GCAAACCTCTGAGCCTGGAACCGATTGACATGTAAATGCACCTGCACCGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491928.1
ENST00000644350.1
CDS-3UTR CAA 90 bp TACAGTTGGTACAGCAGACATGATTGCACTCATTTCACAGAACAGGGTCTGAGGGGGTTGTTGCTGGTTTaGTGGTGGCCTCTTCCGGTC +
Preference number: 5 (lower is better)
Translates to: YSWYSRHDCTHFTEQGLRGLLLV*WWPLPV
Trigger: GACCGGAAGAGGCCACCACAAAACCAGCAACAACCC...CCTCAGACCCTGTTCTGTGAAATGAGTGCAATCATGTCTGCTGTACCAACTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CAA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTAGTGACCCTGGGCAAGTaGCTTAACCTGTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: GMILSKHSPGSETVQVHLVTLGK*LNLSVA
Trigger: AGCCACAGACAGGTTAAGCAACTTGCCCAGGGTCAC...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CAA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACACTGGCCCGTGAAGTaGCAACCCTCGAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: GMILSKHSPGSETVQVHLHWPVK*QPSKIS
Trigger: AGAAATCTTCGAGGGTTGCAACTTCACGGGCCAGTG...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337323.3
ENST00000644350.1
CDS-3UTR CAA 90 bp TTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATAGGCCTGGAGAGGCTTaGGGTTTGCGCCAAATTCAT +
Preference number: 5 (lower is better)
Translates to: LSKHSPGSETVQVHLHVNRPGEA*GLRQIH
Trigger: ATGAATTTGGCGCAAACCCAAAGCCTCTCCAGGCCT...ATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CAA 90 bp GGCATGATTTTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTAGAATCAGGTTGGAGTTaGGAGCCAAGTTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: GMILSKHSPGSETVQVHLESGWS*EPSYLL
Trigger: GAGAAGGTAACTTGGCTCCAAACTCCAACCTGATTC...TAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAAAATCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS-3UTR CAA 90 bp TTAAGTAAACACTCTCCCGGCTCAGAAACGGTGCAGGTGCATTTACATGTCAATGGAGTGGGAATCAGGTaGGAGTTTGGAGCCAAGTTA +
Preference number: 5 (lower is better)
Translates to: LSKHSPGSETVQVHLHVNGVGIR*EFGAKL
Trigger: TAACTTGGCTCCAAACTCCAACCTGATTCCCACTCC...ATTGACATGTAAATGCACCTGCACCGTTTCTGAGCCGGGAGAGTGTTTACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS GCA 72 bp GCCACCAGGCGGTTGGGACCCGCCGCGGCCACCCTGTaGCACCGCGAGTGCAGCCCGCCCTGCCCGGGGTCT +
Preference number: 6 (lower is better)
Translates to: ATRRLGPAAATL*HRECSPPCPGS
Trigger: AGACCCCGGGCAGGGCGGGCTGCACTCGCGGTGGCACAGGGTGGCCGCGGCGGGTCCCAACCGCCTGGTGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS CCA 72 bp GTCGGGCGTGCTAAGCCCGAGGGGCCACCAGGCGGTTaGGACCCGCCGCGGCCACCCTGTGCCACCGCGAGT +
Preference number: 6 (lower is better)
Translates to: VGRAKPEGPPGG*DPPRPPCATAS
Trigger: ACTCGCGGTGGCACAGGGTGGCCGCGGCGGGTCCCAACCGCCTGGTGGCCCCTCGGGCTTAGCACGCCCGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337323.3
CDS CAA 90 bp GAGCTGCGCCCGGCCATCCCGGTGGGAGGGCTCGGCTGGAAGAAGTaGACCACCTTGTGGAGCGACTGCACTCGTGCGCTGTGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: ELRPAIPVGGLGWKK*TTLWSDCTRALWAS
Trigger: GGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCACCGGGATGGCCGGGCGCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CAA 90 bp CCGGCCATCCCGGTGGGAGGGCTCGGCTGGAAGAAGTTGACCACCTaGTGGAGCGACTGCACTCGTGCGCTGTGGGCCTCCCAGTCCGAG +
Preference number: 6 (lower is better)
Translates to: PAIPVGGLGWKKLTT*WSDCTRALWASQSE
Trigger: CTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCACCGGGATGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CCA 72 bp GAGCTGCGCCCGGCCATCCCGGTGGGAGGGCTCGGCTaGAAGAAGTTGACCACCTTGTGGAGCGACTGCACT +
Preference number: 6 (lower is better)
Translates to: ELRPAIPVGGLG*KKLTTLWSDCT
Trigger: AGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCACCGGGATGGCCGGGCGCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CAA 72 bp CCGGTGGGAGGGCTCGGCTGGAAGAAGTTGACCACCTaGTGGAGCGACTGCACTCGTGCGCTGTGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: PVGGLGWKKLTT*WSDCTRALWAS
Trigger: GGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CAA 72 bp CCGGCCATCCCGGTGGGAGGGCTCGGCTGGAAGAAGTaGACCACCTTGTGGAGCGACTGCACTCGTGCGCTG +
Preference number: 6 (lower is better)
Translates to: PAIPVGGLGWKK*TTLWSDCTRAL
Trigger: CAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCACCGGGATGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS TCA 72 bp CGGCCATCCCGGTGGGAGGGCTCGGCTGGAAGAAGTTaGCCACCTTGTGGAGCGACTGCACTCGTGCGCTGT +
Preference number: 6 (lower is better)
Translates to: RPSRWEGSAGRS*PPCGATALVRC
Trigger: ACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCACCGGGATGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CCA 72 bp CGCCACTCTCCACCACGTACATGCGGCCGTGGTAGTTaGGCTCCTCATACAGGACCCACGCTCCGTCCCCGT +
Preference number: 6 (lower is better)
Translates to: RHSPPRTCGRGS*APHTGPTLRPR
Trigger: ACGGGGACGGAGCGTGGGTCCTGTATGAGGAGCCCAACTACCACGGCCGCATGTACGTGGTGGAGAGTGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478106.2
ENST00000644350.1
CDS CCA 72 bp GTGGGAGGGCTCGGCTGGAAGAAGTTGACCACCTTGTaGAGCGACTGCACTCGTGCGCTGTGGGCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: VGGLGWKKLTTL*SDCTRALWASQ
Trigger: CTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAGCCCTCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CCA 72 bp GGAAAGCGCCCTGGATCATCCAGCTCCTCCCAGGGCTaGGATGCCCACTGCCGAGAGAGCACTCAGAAGCCG +
Preference number: 6 (lower is better)
Translates to: GKRPGSSSSSQG*DAHCRESTQKP
Trigger: CGGCTTCTGAGTGCTCTCTCGGCAGTGGGCATCCCAGCCCTGGGAGGAGCTGGATGATCCAGGGCGCTTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS GCA 72 bp ACTTTAAAGCCGGGAGGACCACGCTCCCCGATTCCTTaGCACTGTCTGCCAGGGCTGACCCTCGGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: TLKPGGPRSPIP*HCLPGLTLGPS
Trigger: GGAGGGACCGAGGGTCAGCCCTGGCAGACAGTGGCAAGGAATCGGGGAGCGTGGTCCTCCCGGCTTTAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476631.5
ENST00000491928.1
CDS CCA 72 bp TTGACCACCTTGTGGAGCGACTGCACTCGTGCGCTGTaGGCCTCCCAGTCCGAGAAGCTGCGGAAGTCGCCA +
Preference number: 6 (lower is better)
Translates to: LTTLWSDCTRAL*ASQSEKLRKSP
Trigger: TGGCGACTTCCGCAGCTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CCA 72 bp TCCATGCTCTTGTGGAGCGACTGCACTCGTGCGCTGTaGGCCTCCCAGTCCGAGAAGCTGCGGAAGTCGCCA +
Preference number: 6 (lower is better)
Translates to: SMLLWSDCTRAL*ASQSEKLRKSP
Trigger: TGGCGACTTCCGCAGCTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGAGCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644350.1
CDS CAA 72 bp GACTTTAAAGCCGGGAGGACCACGCTCCCCGATTCCTaGCCACTGTCTGCCAGGGCTGACCCTCGGTCCCTC +
Preference number: 6 (lower is better)
Translates to: DFKAGRTTLPDS*PLSARADPRSL
Trigger: GAGGGACCGAGGGTCAGCCCTGGCAGACAGTGGCAAGGAATCGGGGAGCGTGGTCCTCCCGGCTTTAAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476631.5
ENST00000491928.1
CDS CAA 90 bp GGGATGCCCACTGCCGAGAGAGCACTCAGAAGCCGCCCGTTGGCTTaGAGGACTTTTATCGCCCAAGGTCCCGAGGTCTGGGTGGGACCG +
Preference number: 6 (lower is better)
Translates to: GMPTAERALRSRPLA*RTFIAQGPEVWVGP
Trigger: CGGTCCCACCCAGACCTCGGGACCTTGGGCGATAAAAGTCCTCAAAGCCAACGGGCGGCTTCTGAGTGCTCTCTCGGCAGTGGGCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CAA 90 bp AGGGCTGGGATGCCCACTGCCGAGAGAGCACTCAGAAGCCGCCCGTaGGCTTTGAGGACTTTTATCGCCCAAGGTCCCGAGGTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: RAGMPTAERALRSRP*ALRTFIAQGPEVWV
Trigger: CACCCAGACCTCGGGACCTTGGGCGATAAAAGTCCTCAAAGCCAACGGGCGGCTTCTGAGTGCTCTCTCGGCAGTGGGCATCCCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS GCA 72 bp CTCGGCTGGAAGAAGTTGACCACCTTGTGGAGCGACTaGACTCGTGCGCTGTGGGCCTCCCAGTCCGAGAAG +
Preference number: 6 (lower is better)
Translates to: LGWKKLTTLWSD*TRALWASQSEK
Trigger: CTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTCCAGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS TCA 72 bp CTGCCGAGAGAGCACTCAGAAGCCGCCCGTTGGCTTTaGGGACTTTTATCGCCCAAGGTCCCGAGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: LPREHSEAARWL*GLLSPKVPRSG
Trigger: CCCAGACCTCGGGACCTTGGGCGATAAAAGTCCTCAAAGCCAACGGGCGGCTTCTGAGTGCTCTCTCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS GCA 72 bp AGAAGCTGCGGAAGTCGCCACTCTCCACCACGTACATaGGGCCGTGGTAGTTGGGCTCCTCATACAGGACCC +
Preference number: 6 (lower is better)
Translates to: RSCGSRHSPPRT*GRGSWAPHTGP
Trigger: GGGTCCTGTATGAGGAGCCCAACTACCACGGCCGCATGTACGTGGTGGAGAGTGGCGACTTCCGCAGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478106.2
ENST00000644350.1
CDS GCA 72 bp GAAGAAGTTGACCACCTTGTGGAGCGACTGCACTCGTaGGCTGTGGGCCTCCCAGTCCGAGAAGCTGCGGAA +
Preference number: 6 (lower is better)
Translates to: EEVDHLVERLHS*AVGLPVREAAE
Trigger: TTCCGCAGCTTCTCGGACTGGGAGGCCCACAGCGCACGAGTGCAGTCGCTCCACAAGGTGGTCAACTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS CAA 90 bp AGTCTTACAGACTTTAAAGCCGGGAGGACCACGCTCCCCGATTCCTaGCCACTGTCTGCCAGGGCTGACCCTCGGTCCCTCCAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: SLTDFKAGRTTLPDS*PLSARADPRSLQQE
Trigger: TTCCTGCTGGAGGGACCGAGGGTCAGCCCTGGCAGACAGTGGCAAGGAATCGGGGAGCGTGGTCCTCCCGGCTTTAAAGTCTGTAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476631.5
ENST00000491928.1
CDS CCA 72 bp GCCCCTTGCCTCTCTGCTGCACCAACTAAGCCACCCTaGACGCCCAGGATCAGTTTACAGCACAAAGCAGCC +
Preference number: 6 (lower is better)
Translates to: APCLSAAPTKPP*TPRISLQHKAA
Trigger: GGCTGCTTTGTGCTGTAAACTGATCCTGGGCGTCCAGGGTGGCTTAGTTGGTGCAGCAGAGAGGCAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476631.5
CDS CAA 72 bp ACTGCCGAGAGAGCACTCAGAAGCCGCCCGTTGGCTTaGAGGACTTTTATCGCCCAAGGTCCCGAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: TAERALRSRPLA*RTFIAQGPEVW
Trigger: CCAGACCTCGGGACCTTGGGCGATAAAAGTCCTCAAAGCCAACGGGCGGCTTCTGAGTGCTCTCTCGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478106.2
CDS GCA 72 bp CTCGCCTTGGTGCCAACTTGTTTGTCTCCACGAGGATaGAACCCAAGCTTCCCCGGACAGACAGACAGCCCT +
Preference number: 6 (lower is better)
Translates to: LALVPTCLSPRG*NPSFPGQTDSP
Trigger: AGGGCTGTCTGTCTGTCCGGGGAAGCTTGGGTTGCATCCTCGTGGAGACAAACAAGTTGGCACCAAGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476631.5
CDS CAA 72 bp CTTCTAGGGCTCCATGCTGCTCCGTCCCCGTACACCTaGATGGTGTTCACACAGTTCTTGACCCAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: LLGLHAAPSPYT*MVFTQFLTQPL
Trigger: CAGGGGCTGGGTCAAGAACTGTGTGAACACCATCAAGGTGTACGGGGACGGAGCAGCATGGAGCCCTAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337323.3
ENST00000462809.1
ENST00000476631.5
CDS CAA 72 bp TCCTCATACAGGACCCACGCTCCGTCCCCGTACACCTaGATGGTGTTCACACAGTTCTTGACCCAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: SSYRTHAPSPYT*MVFTQFLTQPL
Trigger: CAGGGGCTGGGTCAAGAACTGTGTGAACACCATCAAGGTGTACGGGGACGGAGCGTGGGTCCTGTATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478106.2
ENST00000644350.1
CDS CAA 72 bp CTGGCTGCAGGTAGTCTCGCCTTGGTGCCAACTTGTTaGTCTCCACGAGGATGCAACCCAAGCTTCCCCGGA +
Preference number: 6 (lower is better)
Translates to: LAAGSLALVPTC*SPRGCNPSFPG
Trigger: TCCGGGGAAGCTTGGGTTGCATCCTCGTGGAGACAAACAAGTTGGCACCAAGGCGAGACTACCTGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476631.5
CDS CAA 90 bp GAGAGTGATCTGGCTGCAGGTAGTCTCGCCTTGGTGCCAACTTGTTaGTCTCCACGAGGATGCAACCCAAGCTTCCCCGGACAGACAGAC +
Preference number: 6 (lower is better)
Translates to: ESDLAAGSLALVPTC*SPRGCNPSFPGQTD
Trigger: GTCTGTCTGTCCGGGGAAGCTTGGGTTGCATCCTCGTGGAGACAAACAAGTTGGCACCAAGGCGAGACTACCTGCAGCCAGATCACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476631.5
CDS CAA 90 bp CCGTGCAGATCTCATGTGCTGAAACCCCTGCTGGCCTTGACATCATaGTCCCCTAGGCTCAGCACATCTCCCTATATGATTCCCGCATTT +
Preference number: 6 (lower is better)
Translates to: PCRSHVLKPLLALTS*SPRLSTSPYMIPAF
Trigger: AAATGCGGGAATCATATAGGGAGATGTGCTGAGCCTAGGGGACAATGATGTCAAGGCCAGCAGGGGTTTCAGCACATGAGATCTGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462809.1
CDS CAA 72 bp TTCATAGAGAGTGATCTGGCTGCAGGTAGTCTCGCCTaGGTGCCAACTTGTTTGTCTCCACGAGGATGCAAC +
Preference number: 6 (lower is better)
Translates to: FIESDLAAGSLA*VPTCLSPRGCN
Trigger: GTTGCATCCTCGTGGAGACAAACAAGTTGGCACCAAGGCGAGACTACCTGCAGCCAGATCACTCTCTATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476631.5
CDS CAA 72 bp TCTCATGTGCTGAAACCCCTGCTGGCCTTGACATCATaGTCCCCTAGGCTCAGCACATCTCCCTATATGATT +
Preference number: 6 (lower is better)
Translates to: SHVLKPLLALTS*SPRLSTSPYMI
Trigger: AATCATATAGGGAGATGTGCTGAGCCTAGGGGACAATGATGTCAAGGCCAGCAGGGGTTTCAGCACATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462809.1
CDS CAA 90 bp AAATGTTCTCCGTGCAGATCTCATGTGCTGAAACCCCTGCTGGCCTaGACATCATTGTCCCCTAGGCTCAGCACATCTCCCTATATGATT +
Preference number: 6 (lower is better)
Translates to: KCSPCRSHVLKPLLA*TSLSPRLSTSPYMI
Trigger: AATCATATAGGGAGATGTGCTGAGCCTAGGGGACAATGATGTCAAGGCCAGCAGGGGTTTCAGCACATGAGATCTGCACGGAGAACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462809.1