RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRY2 (Homo sapiens)

Ensembl gene IDs: ENSG00000121671

Ensembl transcript IDs: ENST00000417225.6, ENST00000443527.6, ENST00000473199.5, ENST00000488962.1, ENST00000495237.1, ENST00000496571.5, ENST00000496667.1, ENST00000532390.5, ENST00000533779.1, ENST00000616080.2, ENST00000616623.4

Found 830 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTaGGGCACTGTTCCGAGGGAGCCCTCAGGGCCACCTGAGCTGGGA +
Preference number: 1 (lower is better)
Translates to: CLQPSLPHAGPWVRI*GTVPREPSGPPELG
Trigger: TCCCAGCTCAGGTGGCCCTGAGGGCTCCCTCGGAACAGTGCCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 90 bp TGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTaGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: CPVISFSAGCTLLLR*LLGHPGFAHGARAL
Trigger: CAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 90 bp GGATTTGAGGCACTGTTCCGAGGGAGCCCTCAGGGCCACCTGAGCTaGGAGAAGGGAGGCATGAAGCCACCATGGAGCTCCAGGCTACTG +
Preference number: 1 (lower is better)
Translates to: GFEALFRGSPQGHLS*EKGGMKPPWSSRLL
Trigger: CAGTAGCCTGGAGCTCCATGGTGGCTTCATGCCTCCCTTCTCCCAGCTCAGGTGGCCCTGAGGGCTCCCTCGGAACAGTGCCTCAAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR TCA 90 bp CCAGGGGGCCTTACGCCACTGCAACCTGGTCTCCTCCTGGTAGAGTaGGTCAGTTTGACCCTTGCCCCTTCACAGCTCCTGGGTAGGCTC +
Preference number: 1 (lower is better)
Translates to: PGGLTPLQPGLLLVE*VSLTLAPSQLLGRL
Trigger: GAGCCTACCCAGGAGCTGTGAAGGGGCAAGGGTCAAACTGACTCACTCTACCAGGAGGAGACCAGGTTGCAGTGGCGTAAGGCCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR TCA 90 bp GCACACGCGCACACACACACACATGCTCGCTCTATCTCTGCCCGGTaGTCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGC +
Preference number: 1 (lower is better)
Translates to: AHAHTHTHARSISAR*SASLQVVLCCCGGC
Trigger: GCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCATGTGTGTGTGTGTGCGCGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR GCA 90 bp CACACACACATGCTCGCTCTATCTCTGCCCGGTGATCAGCTTCTCTaGAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGG +
Preference number: 1 (lower is better)
Translates to: HTHMLALSLPGDQLL*RLYSAAAVAAWAPR
Trigger: CCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCATGTGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR GCA 90 bp CTCTGGCTGCCTCCAGAATCCCATGCTTTGGACAACAGCCAGAACTaGTGTGCTCCTGCTCCACAGCCTGACGTGAGGAGGGAGGGAAGG +
Preference number: 1 (lower is better)
Translates to: LWLPPESHALDNSQN*CAPAPQPDVRREGR
Trigger: CCTTCCCTCCCTCCTCACGTCAGGCTGTGGAGCAGGAGCACAGCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGGAGGCAGCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 90 bp CAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTaGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAG +
Preference number: 1 (lower is better)
Translates to: QVSAESHCHNLEPCV*RPGNSTGVLQVLPQ
Trigger: CTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 90 bp GCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTaGCTGCCTCCAGAATCCCATGCTTTGGACAACAGCCAGAACTGC +
Preference number: 1 (lower is better)
Translates to: ACSASRSESRNSAGL*LPPESHALDNSQNC
Trigger: GCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR GCA 90 bp AGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCAGAATCCCATaGTTTGGACAACAGCCAGAACTGCTGTGCTCCTGCTCCACAGCC +
Preference number: 1 (lower is better)
Translates to: RKQELSRALAASRIP*FGQQPELLCSCSTA
Trigger: GGCTGTGGAGCAGGAGCACAGCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR TCA 90 bp AGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGATGGGTCTaGCCCCAGGGTTCTGGTCCAAGGACAGAGGACAGTGAGGGACAG +
Preference number: 1 (lower is better)
Translates to: RKKPVSVMDSYRRWV*PQGSGPRTEDSEGQ
Trigger: CTGTCCCTCACTGTCCTCTGTCCTTGGACCAGAACCCTGGGGTCAGACCCATCTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTaGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCT +
Preference number: 1 (lower is better)
Translates to: GGRHRPLLECKDWLL*VKPPTYCSWKEWCS
Trigger: AGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 90 bp TGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATaGTGTTCTGGGTGTAATCTCTACTTGGACTTTTGCCAACTGCCC +
Preference number: 1 (lower is better)
Translates to: WLLWVKPPTYCSWKE*CSGCNLYLDFCQLP
Trigger: GGGCAGTTGGCAAAAGTCCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR GCA 90 bp CACACTTTGTGGCTCAAGTGCAGGCCACAGGGTGGAAGGAAGACTTaGTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCA +
Preference number: 1 (lower is better)
Translates to: HTLWLKCRPQGGRKT*FSWPPSSFCMTSFS
Trigger: TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCTTCCACCCTGTGGCCTGCACTTGAGCCACAAAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 90 bp GGCATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTaGTGGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCC +
Preference number: 1 (lower is better)
Translates to: GIPHTSQVSVCTSVG*WKLFRSVYGLMLSP
Trigger: GGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 90 bp TGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTaGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGACTTTTGC +
Preference number: 1 (lower is better)
Translates to: CKDWLLWVKPPTYCS*KEWCSGCNLYLDFC
Trigger: GCAAAAGTCCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTaGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCCAGA +
Preference number: 1 (lower is better)
Translates to: IPHTSQVSVCTSVGW*KLFRSVYGLMLSPR
Trigger: TCTGGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCATGGGCACCCAGGCTTTaGTCACGGAGCAAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPWAPRL*SRSKGS
Trigger: AGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCA...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCTGCTGCTGCGGTGGCTaGTTGGGCACCCAGGCTTTG +
Preference number: 2 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLCCCGG*LGTQAL
Trigger: CAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCA...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACGTTGTACTCTGCTGCTaGGGTGGCTGCTTGGGCACC +
Preference number: 2 (lower is better)
Translates to: TSSLVSGGRETALACYRYVVLCC*GGCLGT
Trigger: GGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAAC...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAACAGGTTGTACTCTGCTaGTGCGGTGGCTGCTTGGGC +
Preference number: 2 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQQVVLC*CGGCLG
Trigger: GCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTG...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAATACAGGAGATGGGTCTaGCCCCAGGGTTCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQYRRWV*PQGSGP
Trigger: TGGACCAGAACCCTGGGGTCAGACCCATCTCCTGTA...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGTGGGCACCCAGGCTTTaGTCACGGAGCAAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRWAPRL*SRSKGS
Trigger: AGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCA...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCTGCTCGCTCTATCTCTaGCCGGTGATCAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LLSLQVRKQELSRALAASCSLYL*PVISFS
Trigger: AGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCA...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCGCCGGGAAACAGCACTaGCGTGCTACAGGTACTCCC +
Preference number: 2 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLAGKQH*RATGTP
Trigger: GGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGC...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACTCCTGGGTAGGCTCTaGGGCTGGCTCTTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKLLGRL*GWLLAS
Trigger: AGAAGCTAAGAGCCAGCCTCAGAGCCTACCCAGGAG...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGTGGGCACCCAGGCTTTaGTCACGGAGCAAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEWAPRL*SRSKGS
Trigger: AGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCA...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGGGCACCCAGGCTTTaGTCACGGAGCAAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPWAPRL*SRSKGS
Trigger: AGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCA...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGCAGGTTGTACTCTGCTaGTGCGGTGGCTGCTTGGGC +
Preference number: 2 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVQVVLC*CGGCLG
Trigger: GCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTG...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAAGAAACAGCACTGGCGTaGTACAGGTACTCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKETALA*YRYSPS
Trigger: GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTC...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTCAGCAGGGCTCTGGCTaGCTCCAGAATCCCATGCTT +
Preference number: 2 (lower is better)
Translates to: RASSRQAGKGIILLPEGAQQGSG*LQNPML
Trigger: AAGCATGGGATTCTGGAGGCAGCCAGAGCCCTGCTG...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTATGGACTTTTGCCAACTaGCCCTGGCAGTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: PAADRQEKESSCYPKALLWTFAN*PWQSPS
Trigger: GGATGGGGACTGCCAGGGGCAGTTGGCAAAAGTCCA...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTTCCTGCTCCACAGCCTaGCGTGAGGAGGGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSSCSTA*REEGGK
Trigger: CTTCCCTCCCTCCTCACGTCAGGCTGTGGAGCAGGA...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACATCCTGCTCCACAGCCTaGCGTGAGGAGGGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTSCSTA*REEGGK
Trigger: CTTCCCTCCCTCCTCACGTCAGGCTGTGGAGCAGGA...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTCCCAACCCAATGCTCTaGATGCACACCATCCCCTGT +
Preference number: 2 (lower is better)
Translates to: RASSRQAGKGIILLPEGAPNPML*MHTIPC
Trigger: ACAGGGGATGGTGTGCATTCAGAGCATTGGGTTGGG...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGCCCCTTCACAGCTCCTaGGTAGGCTCTGAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWPLHSS*VGSEAG
Trigger: GCCAGCCTCAGAGCCTACCCAGGAGCTGTGAAGGGG...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAAAATGGTTTCCCTGGCTaGGTGTCAGCTGTCCTCACT +
Preference number: 2 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQNGFPG*VSAVLT
Trigger: AGTGAGGACAGCTGACACCCAGCCAGGGAAACCATT...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGCAGGGCCACCTGAGCTaGGAGAAGGGAGGCATGAAG +
Preference number: 2 (lower is better)
Translates to: ILPATISSPCWPLGQDLRQGHLS*EKGGMK
Trigger: CTTCATGCCTCCCTTCTCCCAGCTCAGGTGGCCCTG...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGTGGCAGTCTGGATGCTaGCAAGTCCAGGACAGGCCC +
Preference number: 2 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLWQSGC*QVQDRP
Trigger: GGGCCTGTCCTGGACTTGTCAGCATCCAGACTGCCA...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTAGCTACTGGGATAGCTaGCATGGCAGTCTGGATGCT +
Preference number: 2 (lower is better)
Translates to: RASSRQAGKGIILLPEGASYWDS*HGSLDA
Trigger: AGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCT...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAAAGCTACTGGGATAGCTaGCATGGCAGTCTGGATGCT +
Preference number: 2 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKSYWDS*HGSLDA
Trigger: AGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCT...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAAAGAAGCCTGTCAGTGTaGTGGACAGCTACAGGAGAT +
Preference number: 2 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQRSLSV*WTATGD
Trigger: ATCTCCTGTAGCTGTCCATCACACTGACAGGCTTCT...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp GAAGGGAGGCATGAAGCCACCATGGAGCTCCAGGCTACTGGACATACCCTCTCTGCTCCCCTCCCACGATaGTGGGACATTTCTAGTGAA +
Preference number: 2 (lower is better)
Translates to: EGRHEATMELQATGHTLSAPLPR*WDISSE
Trigger: TTCACTAGAAATGTCCCATCATCGTGGGAGGGGAGC...AGAGAGGGTATGTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCCTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCGTTGTACTCTGCTGCTaGGGTGGCTGCTTGGGCACC +
Preference number: 2 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVVVLCC*GGCLGT
Trigger: GGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAAC...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGCAGGTTGTACTCTGCTaGTGCGGTGGCTGCTTGGGC +
Preference number: 2 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLQVVLC*CGGCLG
Trigger: GCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTG...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGTGCTCGCTCTATCTCTaGCCGGTGATCAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRCSLYL*PVISFS
Trigger: AGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCA...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAATGCTCGCTCTATCTCTaGCCGGTGATCAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKCSLYL*PVISFS
Trigger: AGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCA...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAAGCCTCCAGAATCCCATaGTTTGGACAACAGCCAGAA +
Preference number: 2 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQASRIP*FGQQPE
Trigger: TTCTGGCTGTTGTCCAAAGCATGGGATTCTGGAGGC...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACAGCAGGGCTCTGGCTaGCTCCAGAATCCCATGCTT +
Preference number: 2 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGQQGSG*LQNPML
Trigger: AAGCATGGGATTCTGGAGGCAGCCAGAGCCCTGCTG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTCTGTCTATGGCCTCATaGTCAGTCCCAGAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: RASSRQAGKGIILLPEGALSMAS*SVPEAQ
Trigger: TTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAG...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGACTCGAGCCTTGTGTCTaGAGGCCGGGAAACAGCACT +
Preference number: 2 (lower is better)
Translates to: SSATGIADMAVWMLTSPGLEPCV*RPGNST
Trigger: AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGTACGCCACTGCAACCTaGTCTCCTCCTGGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVYATAT*SPPGRV
Trigger: CACTCTACCAGGAGGAGACCAGGTTGCAGTGGCGTA...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp GAAGGGAGGCATGAAGCCACCATGGAGCTCCAGGCTACTGGACATACCCTCTCTCACACACACACTTTGTaGCTCAAGTGCAGGCCACAG +
Preference number: 2 (lower is better)
Translates to: EGRHEATMELQATGHTLSHTHTL*LKCRPQ
Trigger: CTGTGGCCTGCACTTGAGCCACAAAGTGTGTGTGTG...AGAGAGGGTATGTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCTCTATCTCTGCCCGGTaGTCAGCTTCTCTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: QLACRNRSQLKVTAITSSSISAR*SASLQV
Trigger: AACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGA...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGCTCCTCCTGGTAGAGTaGGTCAGTTTGACCCTTGCC +
Preference number: 2 (lower is better)
Translates to: ILPATISSPCWPLGQDLRLLLVE*VSLTLA
Trigger: GGCAAGGGTCAAACTGACTCACTCTACCAGGAGGAG...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACTGCAGGTTGTACTCTaGTGCTGCGGTGGCTGCTTG +
Preference number: 2 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTLQVVL*CCGGCL
Trigger: CAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACATGCTCGCTCTATCTCTaGCCGGTGATCAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: QLKVTAITSSLVSGGRETCSLYL*PVISFS
Trigger: AGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCA...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGAAACAGCACTGGCGTaGTACAGGTACTCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLETALA*YRYSPS
Trigger: GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTC...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACAGCAGGGCTCTGGCTaGCTCCAGAATCCCATGCTT +
Preference number: 2 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTQQGSG*LQNPML
Trigger: AAGCATGGGATTCTGGAGGCAGCCAGAGCCCTGCTG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTCTGGCTCTTAGCTTCTaGGGAAGGAACAATGACAGC +
Preference number: 2 (lower is better)
Translates to: RASSRQAGKGIILLPEGALALSF*GRNNDS
Trigger: GCTGTCATTGTTCCTTCCCCAGAAGCTAAGAGCCAG...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTCCCCTTCACAGCTCCTaGGTAGGCTCTGAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLAPLHSS*VGSEAG
Trigger: GCCAGCCTCAGAGCCTACCCAGGAGCTGTGAAGGGG...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp GAAGGGAGGCATGAAGCCACCATGGAGCTCCAGGCTACTGGACATACCCTCTCTCTCTCTTTCTGGCAGTaGCCCGATTCTCTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: EGRHEATMELQATGHTLSLSFWQ*PDSLSS
Trigger: AGAGGAAAGAGAATCGGGCCACTGCCAGAAAGAGAG...AGAGAGGGTATGTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 90 bp CACACACACACACACGTACCACACACGCACACACACACACACACTTaGTGGCTCAAGTGCAGGCCACAGGGTGGAAGGAAGACTTGCTTT +
Preference number: 2 (lower is better)
Translates to: HTHTHVPHTHTHTHT*WLKCRPQGGRKTCF
Trigger: AAAGCAAGTCTTCCTTCCACCCTGTGGCCTGCACTTGAGCCACAAAGTGTGTGTGTGTGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 90 bp AATACTAAATCTGGGCCTCGGCCTTTGGCCTTCCCACTCTCAGATTaGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGA +
Preference number: 2 (lower is better)
Translates to: NTKSGPRPLAFPLSD*PFQVCLTLFLAVAR
Trigger: TCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATCTGAGAGTGGGAAGGCCAAAGGCCGAGGCCCAGATTTAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 90 bp TACCCGAAGGCGCTGCTAGTGAATACTAAATCTGGGCCTCGGCCTTaGGCCTTCCCACTCTCAGATTTGCCCTTCCAGGTTTGCTTGACT +
Preference number: 2 (lower is better)
Translates to: YPKALLVNTKSGPRP*AFPLSDLPFQVCLT
Trigger: AGTCAAGCAAACCTGGAAGGGCAAATCTGAGAGTGGGAAGGCCAAAGGCCGAGGCCCAGATTTAGTATTCACTAGCAGCGCCTTCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCTCTATCTCTGCCCGGTaGTCAGCTTCTCTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLSISAR*SASLQV
Trigger: AACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGA...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGACAAGGCAGCTGGCTTaGAGGAACAGGTCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWTRQLA*RNRSQL
Trigger: CAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGT...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACAACAAGGCAGCTGGCTTaGAGGAACAGGTCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTTRQLA*RNRSQL
Trigger: CAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGT...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGATCCCTGAGTCCCTCTaGCTGAGTCCTTGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWIPESL*LSPWSS
Trigger: TGAGCTCCAAGGACTCAGGCAGAGGGACTCAGGGAT...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGCCAGGTGGCTACGTCTaGACAGCATCCATCCACTCC +
Preference number: 2 (lower is better)
Translates to: NLRISQEEACQCDGQLQEPGGYV*TASIHS
Trigger: GGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGG...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACAGGCACAGGCCACTCCTaGAATGCAAGGATTGGCTTC +
Preference number: 2 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTGTGHS*NARIGF
Trigger: GAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCC...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTTACAGGAGATGGGTCTaGCCCCAGGGTTCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLAYRRWV*PQGSGP
Trigger: TGGACCAGAACCCTGGGGTCAGACCCATCTCCTGTA...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCAGCCGGGAAACAGCACTaGCGTGCTACAGGTACTCCC +
Preference number: 2 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSAGKQH*RATGTP
Trigger: GGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGC...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTCTCGAGCCTTGTGTCTaGAGGCCGGGAAACAGCACT +
Preference number: 2 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLLEPCV*RPGNST
Trigger: AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGAGCACTGTGGTGCCTTaGAGTGTGGCCAGAGAAACC +
Preference number: 2 (lower is better)
Translates to: NLRISQEEACQCDGQLQESTVVP*SVARET
Trigger: GGTTTCTCTGGCCACACTCCAAGGCACCACAGTGCT...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGGGCACAGGCCACTCCTaGAATGCAAGGATTGGCTTC +
Preference number: 2 (lower is better)
Translates to: NLRISQEEACQCDGQLQEGTGHS*NARIGF
Trigger: GAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCC...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTCAACATTCAGAATCATaGGTGTCAACAGATGCATGC +
Preference number: 2 (lower is better)
Translates to: RASSRQAGKGIILLPEGAQHSES*VSTDAC
Trigger: GCATGCATCTGTTGACACTCATGATTCTGAATGTTG...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGATGAGTGTCAACAGATaGATGCACACACAAACAGGC +
Preference number: 2 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVMSVNR*MHTQTG
Trigger: GCCTGTTTGTGTGTGCATGCATCTGTTGACACTCAT...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTGACAACAGCCAGAACTaGTGTGCTCCTGCTCCACAG +
Preference number: 2 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLADNSQN*CAPAPQ
Trigger: CTGTGGAGCAGGAGCACAGCAGTTCTGGCTGTTGTC...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACAAAGGATTGGCTTCTCTaGGTCAAACCTCCCACCTAC +
Preference number: 2 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTKDWLL*VKPPTY
Trigger: GTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTT...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGCTCAACACAGGCCTTTaGCAGTGGGAAGGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: NLRISQEEACQCDGQLQELNTGL*QWEGRG
Trigger: ACCTCTTCCTTCCCACTGCCAAAGGCCTGTGTTGAG...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTTCTATCTCTGCCCGGTaGTCAGCTTCTCTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLASISAR*SASLQV
Trigger: AACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGA...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR TCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTTCTATCTCTGCCCGGTaGTCAGCTTCTCTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLSISAR*SASLQV
Trigger: AACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGA...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGTCAGCTGAAAGTCACTaGCATAACCTCGAGCCTTGT +
Preference number: 2 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLSAESH*HNLEPC
Trigger: ACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTCTGTCTATGGCCTCATaGTCAGTCCCAGAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLALSMAS*SVPEAQ
Trigger: TTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAG...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGCAGAATCCCATGCTTTaGACAACAGCCAGAACTGCT +
Preference number: 2 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWQNPML*TTARTA
Trigger: AGCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTG...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCAAGCACTGTGGTGCCTTaGAGTGTGGCCAGAGAAACC +
Preference number: 2 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSSTVVP*SVARET
Trigger: GGTTTCTCTGGCCACACTCCAAGGCACCACAGTGCT...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTAAGACTTGCTTTAGTTaGCCACCGTCGTCCTTTTGC +
Preference number: 2 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSKTCFS*PPSSFC
Trigger: GCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTT...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGCATACGTACAACAGTTaGACTCTAAAGGCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: ILPATISSPCWPLGQDLRHTYNS*TLKAAL
Trigger: GAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATG...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTGGTGATCAGCTTCTCTaGAGGTTGTACTCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLGDQLL*RLYSAA
Trigger: AGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACC...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTAAGGATTGGCTTCTCTaGGTCAAACCTCCCACCTAC +
Preference number: 2 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLAKDWLL*VKPPTY
Trigger: GTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTT...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGACTTCTGTAGGGTGGTaGAAACTTTTTAGATCTGTC +
Preference number: 2 (lower is better)
Translates to: ILPATISSPCWPLGQDLRTSVGW*KLFRSV
Trigger: GACAGATCTAAAAAGTTTCCACCACCCTACAGAAGT...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAACTTCTGTAGGGTGGTaGAAACTTTTTAGATCTGTC +
Preference number: 2 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGTSVGW*KLFRSV
Trigger: GACAGATCTAAAAAGTTTCCACCACCCTACAGAAGT...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR GCA 90 bp GGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCCAGAAGCCCAAGGAATGAGTGTCAACAGATaGATGCACACACAAACAGGC +
Preference number: 2 (lower is better)
Translates to: GNFLDLSMASCSVPEAQGMSVNR*MHTQTG
Trigger: GCCTGTTTGTGTGTGCATGCATCTGTTGACACTCAT...TCCTTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGATGTACTTCTGTAGGGTaGTGGAAACTTTTTAGATCT +
Preference number: 2 (lower is better)
Translates to: SSATGIADMAVWMLTSPGCTSVG*WKLFRS
Trigger: AGATCTAAAAAGTTTCCACCACCCTACAGAAGTACA...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCATGCTCCTGGAAGGAATaGTGTTCTGGGTGTAATCTC +
Preference number: 2 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSCSWKE*CSGCNL
Trigger: GAGATTACACCCAGAACACCATTCCTTCCAGGAGCA...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGTGCTGCGGTGGCTGCTaGGGCACCCAGGCTTTGCTC +
Preference number: 3 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRCCGGC*GTQALL
Trigger: GAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCA...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGTTGGGCACCCAGGCTTaGCTCACGGAGCAAGGGCTC +
Preference number: 3 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQLGTQA*LTEQGL
Trigger: GAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAA...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR GCA 72 bp GCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTaGTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: ASLQVVLCCCGG*LGTQALLTEQG
Trigger: CCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp CTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTaGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCT +
Preference number: 3 (lower is better)
Translates to: LCRLYSAAAVAA*APRLCSRSKGS
Trigger: AGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGTTGGGCACCCAGGCTTaGCTCACGGAGCAAGGGCTC +
Preference number: 3 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRLGTQA*LTEQGL
Trigger: GAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAA...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp GAATGGTTTCCCTGGCTGGGTGTCAGCTGTCCTCACTaGCAGCACTGTGGTGCCTTGGAGTGTGGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: EWFPWLGVSCPH*QHCGALECGQR
Trigger: TCTCTGGCCACACTCCAAGGCACCACAGTGCTGCCAGTGAGGACAGCTGACACCCAGCCAGGGAAACCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTaGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCC +
Preference number: 3 (lower is better)
Translates to: GGRHRPLLECKD*LLWVKPPTYCS
Trigger: GGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTTTGGGCACCCAGGCTTaGCTCACGGAGCAAGGGCTC +
Preference number: 3 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTLGTQA*LTEQGL
Trigger: GAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAA...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGACAAGGCAGCTGGCTaGCAGGAACAGGTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: RASSRQAGKGIILLPEGADKAAG*QEQVSA
Trigger: AGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGTC...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR GCA 72 bp ATGCTCGCTCTATCTCTGCCCGGTGATCAGCTTCTCTaGAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: MLALSLPGDQLL*RLYSAAAVAAW
Trigger: CCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR GCA 72 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTaGCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGA +
Preference number: 3 (lower is better)
Translates to: AGLQEQVSAESH*HNLEPCVWRPG
Trigger: TCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR GCA 72 bp CCTCCAGAATCCCATGCTTTGGACAACAGCCAGAACTaGTGTGCTCCTGCTCCACAGCCTGACGTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: PPESHALDNSQN*CAPAPQPDVRR
Trigger: CCTCCTCACGTCAGGCTGTGGAGCAGGAGCACAGCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp GCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTaGCTGCCTCCAGAATCCCATGCTTTGGACAACAGC +
Preference number: 3 (lower is better)
Translates to: ASRSESRNSAGL*LPPESHALDNS
Trigger: GCTGTTGTCCAAAGCATGGGATTCTGGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp AGGAGTGCACTGCCTGACTCCACTGGCAGGTTGATCTaGGAACGGGCTGACATGCTAGGGATGGTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: RSALPDSTGRLI*ERADMLGMVEK
Trigger: CTTCTCCACCATCCCTAGCATGTCAGCCCGTTCCCAGATCAACCTGCCAGTGGAGTCAGGCAGTGCACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACCAGCTTCTCTGCAGGTaGTACTCTGCTGCTGCGGTG +
Preference number: 3 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNQLLCR*YSAAAV
Trigger: CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTG...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGGACAAGGCAGCTGGCTaGCAGGAACAGGTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVDKAAG*QEQVSA
Trigger: AGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGTC...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR TCA 72 bp CTTACGCCACTGCAACCTGGTCTCCTCCTGGTAGAGTaGGTCAGTTTGACCCTTGCCCCTTCACAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: LTPLQPGLLLVE*VSLTLAPSQLL
Trigger: CAGGAGCTGTGAAGGGGCAAGGGTCAAACTGACTCACTCTACCAGGAGGAGACCAGGTTGCAGTGGCGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp GCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTaGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTA +
Preference number: 3 (lower is better)
Translates to: AESHCHNLEPCV*RPGNSTGVLQV
Trigger: TACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGTTGGGCACCCAGGCTTaGCTCACGGAGCAAGGGCTC +
Preference number: 3 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMLGTQA*LTEQGL
Trigger: GAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAA...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACAGCTTCTCTGCAGGTaGTACTCTGCTGCTGCGGTG +
Preference number: 3 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGQLLCR*YSAAAV
Trigger: CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACAGCACTGTGGTGCCTaGGAGTGTGGCCAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGQHCGA*ECGQRN
Trigger: GTTTCTCTGGCCACACTCCAAGGCACCACAGTGCTG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp GAAGGGAGGCATGAAGCCACCATGGAGCTCCAGGCTACTGGACATACCCTCTCTCCTGGAATGCAAGGATaGGCTTCTCTGGGTCAAACC +
Preference number: 3 (lower is better)
Translates to: EGRHEATMELQATGHTLSPGMQG*ASLGQT
Trigger: GGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGG...AGAGAGGGTATGTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR TCA 72 bp CTGCCTGAGTCCTTGGAGCTCAGCTACTGGGATAGCTaGCATGGCAGTCTGGATGCTGACAAGTCCAGGACA +
Preference number: 3 (lower is better)
Translates to: LPESLELSYWDS*HGSLDADKSRT
Trigger: TGTCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCTCCAAGGACTCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp CACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTaGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: HRPLLECKDWLL*VKPPTYCSWKE
Trigger: TTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp CACGTACCACACACGCACACACACACACACACTTTGTaGCTCAAGTGCAGGCCACAGGGTGGAAGGAAGACT +
Preference number: 3 (lower is better)
Translates to: HVPHTHTHTHTL*LKCRPQGGRKT
Trigger: AGTCTTCCTTCCACCCTGTGGCCTGCACTTGAGCCACAAAGTGTGTGTGTGTGTGTGCGTGTGTGGTACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCCACCGTCGTCCTTTaGCATGACATCTTTCTCAAC +
Preference number: 3 (lower is better)
Translates to: RASSRQAGKGIILLPEGAATVVL*HDIFLN
Trigger: GTTGAGAAAGATGTCATGCAAAAGGACGACGGTGGC...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR GCA 72 bp TGGCTCAAGTGCAGGCCACAGGGTGGAAGGAAGACTTaGTTTAGTTGGCCACCGTCGTCCTTTTGCATGACA +
Preference number: 3 (lower is better)
Translates to: WLKCRPQGGRKT*FSWPPSSFCMT
Trigger: TGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCTTCCACCCTGTGGCCTGCACTTGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCAGCTTCTCTGCAGGTaGTACTCTGCTGCTGCGGTG +
Preference number: 3 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMQLLCR*YSAAAV
Trigger: CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTG...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACCAGAATCCCATGCTTaGGACAACAGCCAGAACTGC +
Preference number: 3 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGPESHA*DNSQNC
Trigger: GCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTCCAGAATCCCATGCTTaGGACAACAGCCAGAACTGC +
Preference number: 3 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSPESHA*DNSQNC
Trigger: GCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGG...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACATCTCTACTTGGACTTTaGCCAACTGCCCCTGGCAGT +
Preference number: 3 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTSLLGL*PTAPGS
Trigger: ACTGCCAGGGGCAGTTGGCAAAAGTCCAAGTAGAGA...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACAGGGTGTAATCTCTACTaGGACTTTTGCCAACTGCCC +
Preference number: 3 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTGCNLY*DFCQLP
Trigger: GGGCAGTTGGCAAAAGTCCAAGTAGAGATTACACCC...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp TGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTaGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTG +
Preference number: 3 (lower is better)
Translates to: WLLWVKPPTYCS*KEWCSGCNLYL
Trigger: CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR-3UTR CAA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTCCAGAATCCCATGCTTaGGACAACAGCCAGAACTGC +
Preference number: 3 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLAPESHA*DNSQNC
Trigger: GCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGG...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR TCA 72 bp AGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATaGCATCTTTCTCAACACAGGCCTTTGGCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: RLALVGHRRPFA*HLSQHRPLAVG
Trigger: TCCCACTGCCAAAGGCCTGTGTTGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp ACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTaGAAACTTTTTAGATCTGTCTATGGCCTCATGCTC +
Preference number: 3 (lower is better)
Translates to: TSQVSVCTSVGW*KLFRSVYGLML
Trigger: GAGCATGAGGCCATAGACAGATCTAAAAAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CCA 72 bp CACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTaGTGGAAACTTTTTAGATCTGTCTATGGCCTCATG +
Preference number: 3 (lower is better)
Translates to: HTSQVSVCTSVG*WKLFRSVYGLM
Trigger: CATGAGGCCATAGACAGATCTAAAAAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCGGGCTGTCCGCAGGCTaGGGCTGTCCGCGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSGLSAG*GCPRSA
Trigger: GGCACTCCGCGGACAGCCCCAGCCTGCGGACAGCCC...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417225.6
CDS-3UTR GCA 90 bp CTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCCTGGATCTCGGCCCTaGAGCTCTCCATCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLLRWLLGHPGFAHGARAPGSRP*SSPSAG
Trigger: GCCAGCAGATGGAGAGCTGCAGGGCCGAGATCCAGG...AGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCAAGCAGGCCACGGCATaGCGGGCCAGGTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCKQATA*RARWWI
Trigger: GATCCACCACCTGGCCCGGCATGCCGTGGCCTGCTT...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGGCTCGAGCTGGGCTCTaGCACAGGGTGACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRARAGL*HRVTEV
Trigger: GACCTCAGTCACCCTGTGGCAGAGCCCAGCTCGAGC...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTTGCTGCTGCGGTGGCTaGTTGGGCACCCAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLLRWLLGHPGFAHGARACCCGG*LGTQAL
Trigger: CAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCA...AGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCCGGCAGCTCTGGGGTTaGCAACTCTGCCACCCGGGC +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASRQLWG*QLCHPG
Trigger: GCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCG...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGTCGGTTGATCCCGACTaGGGAGGAGGCCGCGAACCA +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQSVDPD*GGGREP
Trigger: TGGTTCGCGGCCTCCTCCTCAGTCGGGATCAACCGA...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTCCTCTCGACTGGGGCTaGGGGAACAGGGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLPLDWG*GNREAP
Trigger: GGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGG...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCGGCTGCTTCCAGCTTaGGTTTGGGGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCRLLPA*VWGMLG
Trigger: GCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCG...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGCGGCTGCTTCCAGCTTaGGTTTGGGGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQRLLPA*VWGMLG
Trigger: GCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCG...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTTGGGCACCCAGGCTTTaGTCACGGAGCAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LLLRWLLGHPGFAHGARAWAPRL*SRSKGS
Trigger: AGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCA...AGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCGGGGCCTTACGCCACTaGAACCTGGTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCGALRH*NLVSSW
Trigger: CCAGGAGGAGACCAGGTTGCAGTGGCGTAAGGCCCC...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTGCCGGGCCAGGTGGTaGATCCAGCCCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYCRARW*IQPSCL
Trigger: GAGGCAGGAGGGCTGGATCCACCACCTGGCCCGGCA...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCAGCATGCCGGGCCAGGTaGTGGATCCAGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSACRAR*WIQPSC
Trigger: GCAGGAGGGCTGGATCCACCACCTGGCCCGGCATGC...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCACGGCTGGTCTCGGCATaGTTGACGATGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGARLVSA*LTMGRG
Trigger: CCCACGGCCCATCGTCAACCATGCCGAGACCAGCCG...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACCGGCAGCTCTGGGGTTaGCAACTCTGCCACCCGGGC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYRQLWG*QLCHPG
Trigger: GCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCG...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGCCCGGGCCCGTTTGCTaGGTTCTTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQPGPVC*VLHQVV
Trigger: AACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGG...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAATCGGTTGATCCCGACTaGGGAGGAGGCCGCGAACCA +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQSVDPD*GGGREP
Trigger: TGGTTCGCGGCCTCCTCCTCAGTCGGGATCAACCGA...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCACCTCTCGACTGGGGCTaGGGGAACAGGGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: ISFSAGCTLLLRWLLGHPPLDWG*GNREAP
Trigger: GGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGG...TGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACAGAGGCCAGGTGGCTACGTCTGGACAGCATCCATCCACTCCGGCCTGCTCAAAGCAGGCCACGGCATaGCGGGCCAGGTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: NRGQVATSGQHPSTPACSKQATA*RARWWI
Trigger: GATCCACCACCTGGCCCGGCATGCCGTGGCCTGCTT...TGAGCAGGCCGGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGGCCTCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACCTGCACTGCTCATGCTaGCAGCCTGGCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHLHCSC*QPGSSW
Trigger: CCAGCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAG...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCCTTTGCGGAACCAGTaGACCGAAGAGGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCPLRNQ*TEEALS
Trigger: GGACAGCGCCTCTTCGGTGCACTGGTTCCGCAAAGG...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCGGAGTCGCAGCCCTTTaGGGAACCAGTGCACCGAAG +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCGVAAL*GTSAPK
Trigger: CTTCGGTGCACTGGTTCCGCAAAGGGCTGCGACTCC...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCGGGGCCTTACGCCACTaGAACCTGGTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSGALRH*NLVSSW
Trigger: CCAGGAGGAGACCAGGTTGCAGTGGCGTAAGGCCCC...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCCCATCCCCTGTGCCCTaGTCCCCTCCCACGATGATG +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASPSPVP*SPPTMM
Trigger: CATCATCGTGGGAGGGGAGCAGGGCACAGGGGATGG...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGTGGGAACACGTCGGCTaGCTGTCCCCGGACTACAAA +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRWEHVG*LSPDYK
Trigger: TTTGTAGTCCGGGGACAGCCAGCCGACGTGTTCCCA...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCTCGTCGTGGTTCTCCTaGATCTCGGCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCSSWFS*ISALQL
Trigger: GAGCTGCAGGGCCGAGATCCAGGAGAACCACGACGA...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGGACCAAGTCCTTCAGTaGGGAACCCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRDQVLQ*GTPAPP
Trigger: TGGAGGAGCTGGGGTTCCCCACTGAAGGACTTGGTC...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCGGTCCCAGGGGATCTaGATGCAGATGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSRSQGI*MQMGFP
Trigger: GGGGAACCCCATCTGCATCCAGATCCCCTGGGACCG...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGGGATGCTGGGCCACTaGGTAGTGGTCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPGMLGH*VVVLGL
Trigger: CAGGCCCAAGACCACTACCCAGTGGCCCAGCATCCC...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCCCTTCACAGCTCCTaGGTAGGCTCTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSPLHSS*VGSEAG
Trigger: GCCAGCCTCAGAGCCTACCCAGGAGCTGTGAAGGGG...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGCAGGGCCACCTGAGCTaGGAGAAGGGAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQQGHLS*EKGGMK
Trigger: CTTCATGCCTCCCTTCTCCCAGCTCAGGTGGCCCTG...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTGGCATGCGGACAAGTaGCGCAGGCTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRWHADK*RRLGLS
Trigger: GGACAGCCCCAGCCTGCGTCACTTGTCCGCATGCCA...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417225.6
CDS-3UTR TCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGGCTGCCTTCTGAATTaGCTCTGGGGCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQGCLLN*LWGIPG
Trigger: CCCTGGAATGCCCCAGAGTCAATTCAGAAGGCAGCC...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCGGCTCTGCCACAGGGTaGCTGAGGTCTTCCACACAG +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASGSATG*LRSSTQ
Trigger: CTGTGTGGAAGACCTCAGTCACCCTGTGGCAGAGCC...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCACCCGGGCCCGTTTGCTaGGTTCTTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPPGPVC*VLHQVV
Trigger: AACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGG...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAACCTCCATCGGTTaGTCCCGACTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHGTSIG*SRLRRR
Trigger: CCTCCTCCTCAGTCGGGATCAACCGATGGAGGTTCC...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCTGCTCCACAGCCTaGCGTGAGGAGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYSCSTA*REEGGK
Trigger: CTTCCCTCCCTCCTCACGTCAGGCTGTGGAGCAGGA...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACCCTGGATCTCGGCCCTaGAGCTCTCCATCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYPGSRP*SSPSAG
Trigger: GCCAGCAGATGGAGAGCTGCAGGGCCGAGATCCAGG...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGCCCCACTGGGGTCCGTaGGACGGCCAAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRPHWGP*DGQSPQ
Trigger: CTGTGGGCTTTGGCCGTCGCACGGACCCCAGTGGGG...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACGCTCGAGCTGGGCTCTaGCACAGGGTGACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYARAGL*HRVTEV
Trigger: GACCTCAGTCACCCTGTGGCAGAGCCCAGCTCGAGC...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACCTGCACTGCTCATGCTaGCAGCCTGGCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYLHCSC*QPGSSW
Trigger: CCAGCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAG...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACTGCACTGCTCATGCTaGCAGCCTGGCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSLHCSC*QPGSSW
Trigger: CCAGCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAG...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGGGCCTGCACTGCTCATaGTGCCAGCCTGGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRGLHCS*CQPGSS
Trigger: GCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAGGCC...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGGGGTTGGCAACTCTaGCACCCGGGCCCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLWGWQL*HPGPFA
Trigger: AGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCA...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGAGTCTCAGGCATCCTTaGTCGGCAGCTCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQSLRHP*SAALGL
Trigger: CAACCCCAGAGCTGCCGAGCAAGGATGCCTGAGACT...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTGCTGCTGCGGTGGCTaGTTGGGCACCCAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYCCCGG*LGTQAL
Trigger: CAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCA...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACATGACTGTCCAGACTaGTCCAGCCACCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSHDCPD*SSHPRS
Trigger: GGAGCGGGGGTGGCTGGAGCAGTCTGGACAGTCATG...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443527.6
ENST00000616623.4
CDS-3UTR GCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCTGGCAGCACTGTGGTaGCTTGGAGTGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSLAALW*LGVWPE
Trigger: CTCTGGCCACACTCCAAGGCACCACAGTGCTGCCAG...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGTGGACTTTTGCCAACTaGCCCTGGCAGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQWTFAN*PWQSPS
Trigger: GGATGGGGACTGCCAGGGGCAGTTGGCAAAAGTCCA...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTATACCCTCTCTACCCTaGCCTTCCCTCTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLRWLLGHPGFAHGARAIPSLP*PSLLAP
Trigger: TGGAGCCAAGAGGGAAGGGCAGGGTAGAGAGGGTAT...AGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGACCATCTCTTCCCCATaGTGGCCCTTGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRTISSP*WPLGQD
Trigger: ATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGT...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAAGTAGGAACCATGTGTaGGTCCGCCCGGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQSRNHV*VRPGGA
Trigger: AGCTCCACCCGGGCGGACCCACACATGGTTCCTACT...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417225.6
CDS-3UTR CCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGTTCCTTGAACAGCCTTaGGAACACGTCGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRFLEQP*EHVGWL
Trigger: CAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGAA...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGTCTCCATCTGCTGGCTaGTCACCAAGCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQSPSAG*SPSPLA
Trigger: AGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGA...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGTGGCCAGGAGGGAGTTaGCGTTCATTCGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQWPGGS*RSFGVS
Trigger: AGAGACCCCGAATGAACGCCAACTCCCTCCTGGCCA...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCGGTCCCAGGGGATCTaGATGCAGATGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLRSQGI*MQMGFP
Trigger: GGGGAACCCCATCTGCATCCAGATCCCCTGGGACCG...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGAGGCCAGGTGGCTACGTCTGGACAGCATCCATCCACTCCGGCCTGCTCACGGTCCCAGGGGATCTaGATGCAGATGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: NRGQVATSGQHPSTPACSRSQGI*MQMGFP
Trigger: GGGGAACCCCATCTGCATCCAGATCCCCTGGGACCG...TGAGCAGGCCGGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGGCCTCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGTGCCGGGCCAGGTGGTaGATCCAGCCCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: YLCPVISFSAGCTLLLRWCRARW*IQPSCL
Trigger: GAGGCAGGAGGGCTGGATCCACCACCTGGCCCGGCA...CCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAACTTCCAGCTTGCGTTTaGGGGATGCTGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQLPACV*GMLGHW
Trigger: CCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAG...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTGAGTTCTTCACCAGGTaGTTCCTCGGCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLLRWLLGHPGFAHGARAEFFTR*FLGCFQ
Trigger: CTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTC...AGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGCGGCAGCTCTGGGGTTaGCAACTCTGCCACCCGGGC +
Preference number: 4 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVRQLWG*QLCHPG
Trigger: GCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCG...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCGGGAAACAGCACTaGCGTGCTACAGGTACTCCC +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPAGKQH*RATGTP
Trigger: GGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGC...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCGCCGGGAAACAGCACTaGCGTGCTACAGGTACTCCC +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSAGKQH*RATGTP
Trigger: GGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGC...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCAACGCCGGGTTGTCGTaGAGTCGCAGCCCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLNAGLS*SRSPLR
Trigger: CCGCAAAGGGCTGCGACTCCACGACAACCCGGCGTT...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTGGGCCTCGGCCTTTaGCCTTCCCACTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCLGLGL*PSHSQI
Trigger: AATCTGAGAGTGGGAAGGCCAAAGGCCGAGGCCCAG...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGAGGCCAGGTGGCTACGTCTGGACAGCATCCATCCACTCCGGCCTGCTCACCTGCCCTTCCCTCTTaGCTCCAGGAGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: NRGQVATSGQHPSTPACSPALPS*LQECTA
Trigger: GGCAGTGCACTCCTGGAGCCAAGAGGGAAGGGCAGG...TGAGCAGGCCGGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGGCCTCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 72 bp TCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTaGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLQVVLCCCGGC*GTQALLTEQGL
Trigger: GAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 72 bp ACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTaGAGGCACTGTTCCGAGGGAGCCCTCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: TISSPCWPLGQD*RHCSEGALRAT
Trigger: GGTGGCCCTGAGGGCTCCCTCGGAACAGTGCCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGCCTTGGCCATCTTCATaGTGGCTGCATCCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRPWPSS*WLHPVL
Trigger: AAGAACGGGATGCAGCCATCATGAAGATGGCCAAGG...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCGGCTGCCTTCTGAATTaGCTCTGGGGCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSGCLLN*LWGIPG
Trigger: CCCTGGAATGCCCCAGAGTCAATTCAGAAGGCAGCC...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCAGGCTCTGCCACAGGGTaGCTGAGGTCTTCCACACAG +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSGSATG*LRSSTQ
Trigger: CTGTGTGGAAGACCTCAGTCACCCTGTGGCAGAGCC...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTGGCTCTGCCACAGGGTaGCTGAGGTCTTCCACACAG +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLGSATG*LRSSTQ
Trigger: CTGTGTGGAAGACCTCAGTCACCCTGTGGCAGAGCC...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACCCGGGCCCGTTTGCTaGGTTCTTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSPGPVC*VLHQVV
Trigger: AACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGG...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTTCTATCTCTGCCCGGTaGTCAGCTTCTCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LLLRWLLGHPGFAHGARASISAR*SASLQV
Trigger: AACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGA...AGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAATCCTGCTCCACAGCCTaGCGTGAGGAGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQSCSTA*REEGGK
Trigger: CTTCCCTCCCTCCTCACGTCAGGCTGTGGAGCAGGA...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCACTCCTGGGTAGGCTCTaGGGCTGGCTCTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGALLGRL*GWLLAS
Trigger: AGAAGCTAAGAGCCAGCCTCAGAGCCTACCCAGGAG...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGGCAGTCTGGATGCTaGCAAGTCCAGGACAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLWQSGC*QVQDRP
Trigger: GGGCCTGTCCTGGACTTGTCAGCATCCAGACTGCCA...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCTACAGGAGATGGGTCTaGCCCCAGGGTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASYRRWV*PQGSGP
Trigger: TGGACCAGAACCCTGGGGTCAGACCCATCTCCTGTA...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGCCCAACCCAATGCTCTaGATGCACACCATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQPNPML*MHTIPC
Trigger: ACAGGGGATGGTGTGCATTCAGAGCATTGGGTTGGG...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCGATCTGGGAACGGGCTaGCATGCTAGGGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSDLGTG*HARDGG
Trigger: TCCACCATCCCTAGCATGTCAGCCCGTTCCCAGATC...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCCAGGAGTGCACTGCCTaGCTCCACTGGCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASQECTA*LHWQVD
Trigger: ATCAACCTGCCAGTGGAGTCAGGCAGTGCACTCCTG...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAGCCTTCCGTTCCAAGTaGTTATCCAGGCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGAAFRSK*LSRRAR
Trigger: TCTGGCCCGCCTGGATAAGCACTTGGAACGGAAGGC...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCTTCCGTTCCAAGTaGTTATCCAGGCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPAFRSK*LSRRAR
Trigger: TCTGGCCCGCCTGGATAAGCACTTGGAACGGAAGGC...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAAAGGGAAGCCTGTCTTaGCCTCAGCCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQKGSLS*PQPTWP
Trigger: TGGCCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTT...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCCCACTGGGGTCCGTaGGACGGCCAAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEPHWGP*DGQSPQ
Trigger: CTGTGGGCTTTGGCCGTCGCACGGACCCCAGTGGGG...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTCCCCACTGGGGTCCGTaGGACGGCCAAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPPHWGP*DGQSPQ
Trigger: CTGTGGGCTTTGGCCGTCGCACGGACCCCAGTGGGG...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGGCTCGAGCTGGGCTCTaGCACAGGGTGACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRARAGL*HRVTEV
Trigger: GACCTCAGTCACCCTGTGGCAGAGCCCAGCTCGAGC...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAAGGTGGTTCCTCGGCTaGTTCCAGCTTGCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQRWFLG*FQLAFG
Trigger: CCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCT...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACCAGGTTGTACTCTGCTaGTGCGGTGGCTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYQVVLC*CGGCLG
Trigger: GCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTG...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCACTGCAGGTTGTACTCTaGTGCTGCGGTGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPLQVVL*CCGGCL
Trigger: CAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAG...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGTGCTCGCTCTATCTCTaGCCGGTGATCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRCSLYL*PVISFS
Trigger: AGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCA...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGACAAGGCAGCTGGCTTaGAGGAACAGGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQTRQLA*RNRSQL
Trigger: CAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGT...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCCAGCAGGGCTCTGGCTaGCTCCAGAATCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASQQGSG*LQNPML
Trigger: AAGCATGGGATTCTGGAGGCAGCCAGAGCCCTGCTG...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCATCCCTGAGTCCCTCTaGCTGAGTCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCIPESL*LSPWSS
Trigger: TGAGCTCCAAGGACTCAGGCAGAGGGACTCAGGGAT...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCACCATCTCTTCCCCATaGTGGCCCTTGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCTISSP*WPLGQD
Trigger: ATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGT...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCTGCAGTACCATCTCTTCCCCATaGTGGCCCTTGGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: CGGCLGTQALLTEQGLCSTISSP*WPLGQD
Trigger: ATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGT...ACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCGGTCACCAAGCCCACTaGCTTCTTGGGCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSGHQAH*LLGQLH
Trigger: ATGGAGCTGCCCAAGAAGCCAGTGGGCTTGGTGACC...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAATGGCCAGGAGGGAGTTaGCGTTCATTCGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQWPGGS*RSFGVS
Trigger: AGAGACCCCGAATGAACGCCAACTCCCTCCTGGCCA...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGGATCTGGATGCAGATaGGGTTCCCCTCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPGSGCR*GSPPCG
Trigger: ACCGCATGGAGGGGAACCCCATCTGCATCCAGATCC...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGCCGGGCCAGGTGGTaGATCCAGCCCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPCRARW*IQPSCL
Trigger: GAGGCAGGAGGGCTGGATCCACCACCTGGCCCGGCA...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTGTTGACGATGGGCCGTaGGTAGTCCACACCAATGAT +
Preference number: 4 (lower is better)
Translates to: LLLRWLLGHPGFAHGARAVDDGP*VVHTND
Trigger: ATCATTGGTGTGGACTACCCACGGCCCATCGTCAAC...AGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAACTCGAGCCTTGTGTCTaGAGGCCGGGAAACAGCACT +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQLEPCV*RPGNST
Trigger: AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGAACGCCGGGTTGTCGTaGAGTCGCAGCCCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRNAGLS*SRSPLR
Trigger: CCGCAAAGGGCTGCGACTCCACGACAACCCGGCGTT...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCGTCAGCTGTCCTCACTaGCAGCACTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASVSCPH*QHCGAL
Trigger: CAAGGCACCACAGTGCTGCCAGTGAGGACAGCTGAC...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACACAGGCCTTTGGCAGTaGGAAGGAAGAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHTGLWQ*EGRGGR
Trigger: CCTCCCACCTCTTCCTTCCCACTGCCAAAGGCCTGT...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCCTGGGCCTCGGCCTTTaGCCTTCCCACTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASLGLGL*PSHSQI
Trigger: AATCTGAGAGTGGGAAGGCCAAAGGCCGAGGCCCAG...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGACTGGCAGGTTGATCTaGGAACGGGCTGACATGCTA +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRTGRLI*ERADML
Trigger: TAGCATGTCAGCCCGTTCCCAGATCAACCTGCCAGT...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCGGAGCTCCAGGCTACTaGACATACCCTCTCTACCCT +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCGAPGY*TYPLYP
Trigger: AGGGTAGAGAGGGTATGTCCAGTAGCCTGGAGCTCC...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCATGGTCTCGGCATGGTTaGCGATGGGCCGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: ISFSAGCTLLLRWLLGHPWSRHG*RWAVGS
Trigger: ACTACCCACGGCCCATCGTCAACCATGCCGAGACCA...TGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCACAGTCGCCGCCATaGCTGTCCAGACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKPQSPP*LSRLLQ
Trigger: CTGGAGCAGTCTGGACAGTCATGGCGGCGACTGTGG...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443527.6
ENST00000616623.4
CDS-3UTR TCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCAGCTACTGGGATAGCTaGCATGGCAGTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCSYWDS*HGSLDA
Trigger: AGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCT...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGCCAGGGCCTCAGGATTaGGGTCCCAGGGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRPGPQD*GPRGSG
Trigger: TCCAGATCCCCTGGGACCGCAATCCTGAGGCCCTGG...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGCCAGGGCCTCAGGATTaGGGTCCCAGGGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVPGPQD*GPRGSG
Trigger: TCCAGATCCCCTGGGACCGCAATCCTGAGGCCCTGG...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTCCAGGGCCTCAGGATTaGGGTCCCAGGGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGAPGPQD*GPRGSG
Trigger: TCCAGATCCCCTGGGACCGCAATCCTGAGGCCCTGG...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTAAGGGAAGCCTGTCTTaGCCTCAGCCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLKGSLS*PQPTWP
Trigger: TGGCCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTT...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCAAGCAGGCCACGGCATaGCGGGCCAGGTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSKQATA*RARWWI
Trigger: GATCCACCACCTGGCCCGGCATGCCGTGGCCTGCTT...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAAAGCAGGCCACGGCATaGCGGGCCAGGTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETKQATA*RARWWI
Trigger: GATCCACCACCTGGCCCGGCATGCCGTGGCCTGCTT...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGGCTCGAGCTGGGCTCTaGCACAGGGTGACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: YLCPVISFSAGCTLLLRWARAGL*HRVTEV
Trigger: GACCTCAGTCACCCTGTGGCAGAGCCCAGCTCGAGC...CCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACGGCCTGCACTGCTCATaGTGCCAGCCTGGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNGLHCS*CQPGSS
Trigger: GCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAGGCC...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCGGCCTGCACTGCTCATaGTGCCAGCCTGGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSGLHCS*CQPGSS
Trigger: GCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAGGCC...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGGGCCTGCACTGCTCATaGTGCCAGCCTGGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEGLHCS*CQPGSS
Trigger: GCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAGGCC...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGTCTTGGGCCTGCACTaGTCATGCTGCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVVLGLH*SCCQPG
Trigger: GCCAGGCTGGCAGCATGAGCAGTGCAGGCCCAAGAC...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGGGTTGGCAACTCTaGCACCCGGGCCCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRWGWQL*HPGPFA
Trigger: AGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCA...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGTGCTGCTGCGGTGGCTaGTTGGGCACCCAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRCCCGG*LGTQAL
Trigger: CAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCA...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACTGCAGGTTGTACTCTaGTGCTGCGGTGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSLQVVL*CCGGCL
Trigger: CAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAG...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTCTGCAGGTTGTACTCTaGTGCTGCGGTGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLLQVVL*CCGGCL
Trigger: CAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAG...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACAGAGGCCAGGTGGCTACGTCTGGACAGCATCCATCCACTCCGGCCTGCTCAGAAACAGCACTGGCGTaGTACAGGTACTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: NRGQVATSGQHPSTPACSETALA*YRYSPS
Trigger: GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTC...TGAGCAGGCCGGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGGCCTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGCATGACTGTCCAGACTaGTCCAGCCACCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRHDCPD*SSHPRS
Trigger: GGAGCGGGGGTGGCTGGAGCAGTCTGGACAGTCATG...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443527.6
ENST00000616623.4
CDS-3UTR GCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGCCTTTGCGGAACCAGTaGACCGAAGAGGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRPLRNQ*TEEALS
Trigger: GGACAGCGCCTCTTCGGTGCACTGGTTCCGCAAAGG...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGACAACAGCCAGAACTaGTGTGCTCCTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHDNSQN*CAPAPQ
Trigger: CTGTGGAGCAGGAGCACAGCAGTTCTGGCTGTTGTC...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCATCCCTGAGTCCCTCTaGCTGAGTCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASIPESL*LSPWSS
Trigger: TGAGCTCCAAGGACTCAGGCAGAGGGACTCAGGGAT...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCGGTGGAAGGAAGACTTaGTTTAGTTGGCCACCGTCG +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCGGRKT*FSWPPS
Trigger: CGACGGTGGCCAACTAAAGCAAGTCTTCCTTCCACC...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACGGTCACCAAGCCCACTaGCTTCTTGGGCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYGHQAH*LLGQLH
Trigger: ATGGAGCTGCCCAAGAAGCCAGTGGGCTTGGTGACC...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCATCTCCATCTGCTGGCTaGTCACCAAGCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSSPSAG*SPSPLA
Trigger: AGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGA...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGCGGCTGGTCTCGGCATaGTTGACGATGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVRLVSA*LTMGRG
Trigger: CCCACGGCCCATCGTCAACCATGCCGAGACCAGCCG...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGGGATGCTGGGCCACTaGGTAGTGGTCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGAGMLGH*VVVLGL
Trigger: CAGGCCCAAGACCACTACCCAGTGGCCCAGCATCCC...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGCTTCCAGCTTGCGTTTaGGGGATGCTGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRLPACV*GMLGHW
Trigger: CCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAG...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACGGCAGCTCTGGGGTTaGCAACTCTGCCACCCGGGC +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGRQLWG*QLCHPG
Trigger: GCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTAACGCCGGGTTGTCGTaGAGTCGCAGCCCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGANAGLS*SRSPLR
Trigger: CCGCAAAGGGCTGCGACTCCACGACAACCCGGCGTT...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GAAGGGAGGCATGAAGCCACCATGGAGCTCCAGGCTACTGGACATACCCTCTCTCCCCTTCACAGCTCCTaGGTAGGCTCTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EGRHEATMELQATGHTLSPLHSS*VGSEAG
Trigger: GCCAGCCTCAGAGCCTACCCAGGAGCTGTGAAGGGG...AGAGAGGGTATGTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCCTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGCTAGAATGGTTTCCCTaGCTGGGTGTCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQLEWFP*LGVSCP
Trigger: AGGACAGCTGACACCCAGCCAGGGAAACCATTCTAG...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCACCCACCTACTGCTCCTaGAAGGAATGGTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPPTYCS*KEWCSG
Trigger: CCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGG...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAACCCACCTACTGCTCCTaGAAGGAATGGTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQPTYCS*KEWCSG
Trigger: CCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGG...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAGGCACAGGCCACTCCTaGAATGCAAGGATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGAGTGHS*NARIGF
Trigger: GAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCC...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGCTCAACACAGGCCTTTaGCAGTGGGAAGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQLNTGL*QWEGRG
Trigger: ACCTCTTCCTTCCCACTGCCAAAGGCCTGTGTTGAG...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGAAGTAGGCGGAGGTaGTCCTGCCAACCTGTACCT +
Preference number: 4 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGARSRRR*SCQPVP
Trigger: AGGTACAGGTTGGCAGGACCACCTCCGCCTACTTCT...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCACTGGCAGGTTGATCTaGGAACGGGCTGACATGCTA +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCTGRLI*ERADML
Trigger: TAGCATGTCAGCCCGTTCCCAGATCAACCTGCCAGT...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGAGCTCCAGGCTACTaGACATACCCTCTCTACCCT +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQGAPGY*TYPLYP
Trigger: AGGGTAGAGAGGGTATGTCCAGTAGCCTGGAGCTCC...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACGGCATGAAGCCACCATaGAGCTCCAGGCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYGMKPP*SSRLLD
Trigger: GTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCC...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCGGCATGAAGCCACCATaGAGCTCCAGGCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLGMKPP*SSRLLD
Trigger: GTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCC...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCGGCTGATGATGGCCTaGAAGCGCTTGTATGTAAGG +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSRLMMA*KRLYVR
Trigger: CCTTACATACAAGCGCTTTCAGGCCATCATCAGCCG...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGCCTCAGTTGGGTCATaGTGGCATCAATCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHASVGS*WHQSKG
Trigger: TCCCTTGGATTGATGCCATCATGACCCAACTGAGGC...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGTGGTCTCGGCATGGTTaGCGATGGGCCGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRWSRHG*RWAVGS
Trigger: ACTACCCACGGCCCATCGTCAACCATGCCGAGACCA...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GAAGGGAGGCATGAAGCCACCATGGAGCTCCAGGCTACTGGACATACCCTCTCTTGGTCTCGGCATGGTTaGCGATGGGCCGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: EGRHEATMELQATGHTLSWSRHG*RWAVGS
Trigger: ACTACCCACGGCCCATCGTCAACCATGCCGAGACCA...AGAGAGGGTATGTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCCTCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGGCTCTGCCACAGGGTaGCTGAGGTCTTCCACACAG +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRGSATG*LRSSTQ
Trigger: CTGTGTGGAAGACCTCAGTCACCCTGTGGCAGAGCC...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGCCCGGGCCCGTTTGCTaGGTTCTTCACCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRPGPVC*VLHQVV
Trigger: AACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGG...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACCCACAGTCGCCGCCATaGCTGTCCAGACTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNPQSPP*LSRLLQ
Trigger: CTGGAGCAGTCTGGACAGTCATGGCGGCGACTGTGG...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443527.6
ENST00000616623.4
CDS-3UTR TCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACATCCTGCTCCACAGCCTaGCGTGAGGAGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETSCSTA*REEGGK
Trigger: CTTCCCTCCCTCCTCACGTCAGGCTGTGGAGCAGGA...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCACTCCTGGGTAGGCTCTaGGGCTGGCTCTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ISFSAGCTLLLRWLLGHPLLGRL*GWLLAS
Trigger: AGAAGCTAAGAGCCAGCCTCAGAGCCTACCCAGGAG...TGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACCTCCTCCTGGTAGAGTaGGTCAGTTTGACCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYLLLVE*VSLTLA
Trigger: GGCAAGGGTCAAACTGACTCACTCTACCAGGAGGAG...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGCGTCGTCCTTTTGCATaGCATCTTTCTCAACACAGG +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRRRPFA*HLSQHR
Trigger: CCTGTGTTGAGAAAGATGTCATGCAAAAGGACGACG...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCTGCAGTAGAAGCCTGTCAGTGTaGTGGACAGCTACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: CGGCLGTQALLTEQGLCSRSLSV*WTATGD
Trigger: ATCTCCTGTAGCTGTCCATCACACTGACAGGCTTCT...ACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTCCCAACCCAATGCTCTaGATGCACACCATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLPNPML*MHTIPC
Trigger: ACAGGGGATGGTGTGCATTCAGAGCATTGGGTTGGG...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGGGGTTGTTGGTAGCTaGCGTGTAGAAGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPGVVGS*RVEELS
Trigger: CGAGAGTTCTTCTACACGGCAGCTACCAACAACCCC...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGCCCCACTGGGGTCCGTaGGACGGCCAAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLPHWGP*DGQSPQ
Trigger: CTGTGGGCTTTGGCCGTCGCACGGACCCCAGTGGGG...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACGTCTTGGGCCTGCACTaGTCATGCTGCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNVLGLH*SCCQPG
Trigger: GCCAGGCTGGCAGCATGAGCAGTGCAGGCCCAAGAC...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGAGGTGGTTCCTCGGCTaGTTCCAGCTTGCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRRWFLG*FQLAFG
Trigger: CCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCT...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCTGGGGTTGGCAACTCTaGCACCCGGGCCCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSWGWQL*HPGPFA
Trigger: AGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCA...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGGCACCCAGGCTTTaGTCACGGAGCAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRWAPRL*SRSKGS
Trigger: AGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCA...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGTCAGCTGAAAGTCACTaGCATAACCTCGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRSAESH*HNLEPC
Trigger: ACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCAACAAGGCAGCTGGCTTaGAGGAACAGGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSTRQLA*RNRSQL
Trigger: CAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGT...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGGGAGTCGCAGCCCTTTaGGGAACCAGTGCACCGAAG +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRGVAAL*GTSAPK
Trigger: CTTCGGTGCACTGGTTCCGCAAAGGGCTGCGACTCC...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGGGGGCCTTACGCCACTaGAACCTGGTCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEGALRH*NLVSSW
Trigger: CCAGGAGGAGACCAGGTTGCAGTGGCGTAAGGCCCC...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAACTCTACTTGGACTTTTaGCAACTGCCCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQLYLDF*QLPLAV
Trigger: GACTGCCAGGGGCAGTTGGCAAAAGTCCAAGTAGAG...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGAGGCCAGGTGGCTACGTCTGGACAGCATCCATCCACTCCGGCCTGCTCATTCCTTGAACAGCCTTaGGAACACGTCGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NRGQVATSGQHPSTPACSFLEQP*EHVGWL
Trigger: CAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGAA...TGAGCAGGCCGGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGGCCTCTGTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTTGTATGTAAGGGGTaGCTTCTGCCCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCLVCKG*LLPIQL
Trigger: GAGCTGAATGGGCAGAAGCCACCCCTTACATACAAG...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAAGGTCACCAAGCCCACTaGCTTCTTGGGCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQGHQAH*LLGQLH
Trigger: ATGGAGCTGCCCAAGAAGCCAGTGGGCTTGGTGACC...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCATCTCCATCTGCTGGCTaGTCACCAAGCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: ISFSAGCTLLLRWLLGHPSPSAG*SPSPLA
Trigger: AGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGA...TGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCAGGGGTCTCTCATAGTTaGCAACCCAGGCCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSGVSHS*QPRPSV
Trigger: AACGGAAGGCCTGGGTTGCCAACTATGAGAGACCCC...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGTGCCGGGCCAGGTGGTaGATCCAGCCCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLCRARW*IQPSCL
Trigger: GAGGCAGGAGGGCTGGATCCACCACCTGGCCCGGCA...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCGTTGACGATGGGCCGTaGGTAGTCCACACCAATGAT +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASVDDGP*VVHTND
Trigger: ATCATTGGTGTGGACTACCCACGGCCCATCGTCAAC...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGGGGATGCTGGGCCACTaGGTAGTGGTCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEGMLGH*VVVLGL
Trigger: CAGGCCCAAGACCACTACCCAGTGGCCCAGCATCCC...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGCTTCCAGCTTGCGTTTaGGGGATGCTGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVLPACV*GMLGHW
Trigger: CCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAG...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCCGGGAAACAGCACTaGCGTGCTACAGGTACTCCC +
Preference number: 4 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVAGKQH*RATGTP
Trigger: GGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGC...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCACTCGAGCCTTGTGTCTaGAGGCCGGGAAACAGCACT +
Preference number: 4 (lower is better)
Translates to: ISFSAGCTLLLRWLLGHPLEPCV*RPGNST
Trigger: AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG...TGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCATTCAGACAAGGCAGCTaGCTTGCAGGAACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGAFRQGS*LAGTGL
Trigger: GAGACCTGTTCCTGCAAGCCAGCTGCCTTGTCTGAA...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCTTCAGACAAGGCAGCTaGCTTGCAGGAACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LVSGGRETALACYRYSPSFRQGS*LAGTGL
Trigger: GAGACCTGTTCCTGCAAGCCAGCTGCCTTGTCTGAA...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACAACTCAGCAGGGCTCTaGCTGCCTCCAGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYNSAGL*LPPESH
Trigger: ATGGGATTCTGGAGGCAGCCAGAGCCCTGCTGAGTT...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCTGCAGTCTGGCTCTTAGCTTCTaGGGAAGGAACAATGACAGC +
Preference number: 4 (lower is better)
Translates to: CGGCLGTQALLTEQGLCSLALSF*GRNNDS
Trigger: GCTGTCATTGTTCCTTCCCCAGAAGCTAAGAGCCAG...ACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TCGCTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCCCCTTCACAGCTCCTaGGTAGGCTCTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLYLCPVISFSAGCTLLLPLHSS*VGSEAG
Trigger: GCCAGCCTCAGAGCCTACCCAGGAGCTGTGAAGGGG...CAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCATACGCCACTGCAACCTaGTCTCCTCCTGGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSYATAT*SPPGRV
Trigger: CACTCTACCAGGAGGAGACCAGGTTGCAGTGGCGTA...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCGCTGACATGGCAGTCTaGATGCTGACAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASADMAV*MLTSPG
Trigger: TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGC...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACGGCACAGGCCACTCCTaGAATGCAAGGATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYGTGHS*NARIGF
Trigger: GAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCC...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACCACACACACACTTTGTaGCTCAAGTGCAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHHTHTL*LKCRPQ
Trigger: CTGTGGCCTGCACTTGAGCCACAAAGTGTGTGTGTG...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACACCTGCCCTTCCCTCTTaGCTCCAGGAGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETPALPS*LQECTA
Trigger: GGCAGTGCACTCCTGGAGCCAAGAGGGAAGGGCAGG...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCAGGGCCACCTGAGCTaGGAGAAGGGAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: YLCPVISFSAGCTLLLRWQGHLS*EKGGMK
Trigger: CTTCATGCCTCCCTTCTCCCAGCTCAGGTGGCCCTG...CCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACATCTCTTCCCCATGCTaGCCCTTGGGTCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHISSPC*PLGQDL
Trigger: CAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGAT...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTCCTTGGCCATCTTCATaGTGGCTGCATCCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLPWPSS*WLHPVL
Trigger: AAGAACGGGATGCAGCCATCATGAAGATGGCCAAGG...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAATGCCTGCGTTCACGCTaGAATCTGCATCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQCLRSR*NLHPGA
Trigger: TGCTCCTGGATGCAGATTTCAGCGTGAACGCAGGCA...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGGGCTGCCTTCTGAATTaGCTCTGGGGCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: YLCPVISFSAGCTLLLRWGCLLN*LWGIPG
Trigger: CCCTGGAATGCCCCAGAGTCAATTCAGAAGGCAGCC...CCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTCTGCCACAGGGTGACTaGGGTCTTCCACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGALPQGD*GLPHRK
Trigger: CTTCCTGTGTGGAAGACCTCAGTCACCCTGTGGCAG...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTACTGCCACAGGGTGACTaGGGTCTTCCACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAADRQEKESSCYPKALLLPQGD*GLPHRK
Trigger: CTTCCTGTGTGGAAGACCTCAGTCACCCTGTGGCAG...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGTCGGTTGATCCCGACTaGGGAGGAGGCCGCGAACCA +
Preference number: 4 (lower is better)
Translates to: ILPATISSPCWPLGQDLRSVDPD*GGGREP
Trigger: TGGTTCGCGGCCTCCTCCTCAGTCGGGATCAACCGA...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCACTGGGGAAGGAACAATaGCAGCTGGGATTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGALGKEQ*QLGFSF
Trigger: GAAAGAGAATCCCAGCTGTCATTGTTCCTTCCCCAG...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AACAGAGGCCAGGTGGCTACGTCTGGACAGCATCCATCCACTCCGGCCTGCTCAAGCTACTGGGATAGCTaGCATGGCAGTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: NRGQVATSGQHPSTPACSSYWDS*HGSLDA
Trigger: AGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCT...TGAGCAGGCCGGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGGCCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTACAGGAGATGGGTCTaGCCCCAGGGTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRYRRWV*PQGSGP
Trigger: TGGACCAGAACCCTGGGGTCAGACCCATCTCCTGTA...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCGCTCCCCTCCCACGATaGTGGGACATTTCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLAPLPR*WDISSE
Trigger: TTCACTAGAAATGTCCCATCATCGTGGGAGGGGAGC...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATCCTCTCGACTGGGGCTaGGGGAACAGGGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHPLDWG*GNREAP
Trigger: GGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGG...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACCTTCCAGGTTTGCTTaGCTCTCTTTCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSPSRFA*LSFWQW
Trigger: CCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGG...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCATCTTCATGATGGCTaGATCCCGTTCTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LLLRWLLGHPGFAHGARAHLHDG*IPFFPK
Trigger: TTTGGGAAAGAACGGGATGCAGCCATCATGAAGATG...AGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGTAAGGGGTGGCTTCTaGCCATTCAGCTCAATGATC +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPVRGGF*PFSSMI
Trigger: GATCATTGAGCTGAATGGGCAGAAGCCACCCCTTAC...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAAGGGAGAGGGGAGGTGTaGTGTTCCGCTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQGRGEV*CSASPF
Trigger: AAAAGGTGAAGCGGAACAGCACACCTCCCCTCTCCC...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGGCTGGAAGAAAGCACTaGAGGACAGCCACATCCAGC +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRAGRKH*RTATSS
Trigger: GCTGGATGTGGCTGTCCTGCAGTGCTTTCTTCCAGC...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAAGCTGGAAGAAAGCACTaGAGGACAGCCACATCCAGC +
Preference number: 4 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQAGRKH*RTATSS
Trigger: GCTGGATGTGGCTGTCCTGCAGTGCTTTCTTCCAGC...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGTCTTGGGCCTGCACTaGTCATGCTGCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLVLGLH*SCCQPG
Trigger: GCCAGGCTGGCAGCATGAGCAGTGCAGGCCCAAGAC...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCCGGCTGCTTCCAGCTTaGGTTTGGGGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLRLLPA*VWGMLG
Trigger: GCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCG...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTAAGTCTCAGGCATCCTTaGTCGGCAGCTCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PAADRQEKESSCYPKALLSLRHP*SAALGL
Trigger: CAACCCCAGAGCTGCCGAGCAAGGATGCCTGAGACT...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAAAGTCTCAGGCATCCTTaGTCGGCAGCTCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKSLRHP*SAALGL
Trigger: CAACCCCAGAGCTGCCGAGCAAGGATGCCTGAGACT...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGTTGTACTCTGCTGCTaGGGTGGCTGCTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTVVLCC*GGCLGT
Trigger: GGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAAC...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGGTTGTACTCTGCTGCTaGGGTGGCTGCTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEVVLCC*GGCLGT
Trigger: GGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAAC...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTCAGGTTGTACTCTGCTaGTGCGGTGGCTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPQVVLC*CGGCLG
Trigger: GCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTG...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCTCAGCTGAAAGTCACTaGCATAACCTCGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCSAESH*HNLEPC
Trigger: ACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTCCTTTGCGGAACCAGTaGACCGAAGAGGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTPLRNQ*TEEALS
Trigger: GGACAGCGCCTCTTCGGTGCACTGGTTCCGCAAAGG...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGGACAACAGCCAGAACTaGTGTGCTCCTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRDNSQN*CAPAPQ
Trigger: CTGTGGAGCAGGAGCACAGCAGTTCTGGCTGTTGTC...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAAAACCTCCCACCTACTaGTCCTGGAAGGAATGGTGT +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQKPPTY*SWKEWC
Trigger: ACACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTT...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGACCATCCCCTGTGCCCTaGTCCCCTCCCACGATGATG +
Preference number: 4 (lower is better)
Translates to: SSATGIADMAVWMLTSPGPSPVP*SPPTMM
Trigger: CATCATCGTGGGAGGGGAGCAGGGCACAGGGGATGG...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCAAGCCCCCAACCCAATaGTCTGAATGCACACCATCC +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLKPPTQ*SECTPS
Trigger: GGATGGTGTGCATTCAGAGCATTGGGTTGGGGGCTT...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCACAAGTGACGCAGGCTaGGGCTGTCCGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVTSDAG*GCPQAG
Trigger: CCCAGCCTGCGGACAGCCCCAGCCTGCGTCACTTGT...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417225.6
CDS-3UTR CCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGGTCACCAAGCCCACTaGCTTCTTGGGCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRGHQAH*LLGQLH
Trigger: ATGGAGCTGCCCAAGAAGCCAGTGGGCTTGGTGACC...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCTCGTCGTGGTTCTCCTaGATCTCGGCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSSSWFS*ISALQL
Trigger: GAGCTGCAGGGCCGAGATCCAGGAGAACCACGACGA...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GAAGGGAGGCATGAAGCCACCATGGAGCTCCAGGCTACTGGACATACCCTCTCTGACCAAGTCCTTCAGTaGGGAACCCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EGRHEATMELQATGHTLSDQVLQ*GTPAPP
Trigger: TGGAGGAGCTGGGGTTCCCCACTGAAGGACTTGGTC...AGAGAGGGTATGTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCCTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGTCCCTGCCAGACAGCTaGACCAAGTCCTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVSLPDS*TKSFSG
Trigger: CCCACTGAAGGACTTGGTCCAGCTGTCTGGCAGGGA...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTTCCCTGCCAGACAGCTaGACCAAGTCCTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGASLPDS*TKSFSG
Trigger: CCCACTGAAGGACTTGGTCCAGCTGTCTGGCAGGGA...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGGATCTGGATGCAGATaGGGTTCCCCTCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRGSGCR*GSPPCG
Trigger: ACCGCATGGAGGGGAACCCCATCTGCATCCAGATCC...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGGCATGCCGGGCCAGGTaGTGGATCCAGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NLRISQEEACQCDGQLQEACRAR*WIQPSC
Trigger: GCAGGAGGGCTGGATCCACCACCTGGCCCGGCATGC...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCACAGTGGAAGAACTGCTaGAAGAAAGCACTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGAQWKNC*KKALQD
Trigger: GTCCTGCAGTGCTTTCTTCCAGCAGTTCTTCCACTG...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGCGGCTGGTCTCGGCATaGTTGACGATGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWRLVSA*LTMGRG
Trigger: CCCACGGCCCATCGTCAACCATGCCGAGACCAGCCG...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTGCCGGGAAACAGCACTaGCGTGCTACAGGTACTCCC +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPAGKQH*RATGTP
Trigger: GGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGC...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGAAACAGAGGCCAGGTaGCTACGTCTGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: ISFSAGCTLLLRWLLGHPETEAR*LRLDSI
Trigger: GATGCTGTCCAGACGTAGCCACCTGGCCTCTGTTTC...TGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAATCACTGGCAGCACTGTaGTGCCTTGGAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKSLAAL*CLGVWP
Trigger: TGGCCACACTCCAAGGCACCACAGTGCTGCCAGTGA...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCGTCAGCTGTCCTCACTaGCAGCACTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLVSCPH*QHCGAL
Trigger: CAAGGCACCACAGTGCTGCCAGTGAGGACAGCTGAC...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCTAGAATGGTTTCCCTaGCTGGGTGTCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLLEWFP*LGVSCP
Trigger: AGGACAGCTGACACCCAGCCAGGGAAACCATTCTAG...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACAAGGATTGGCTTCTCTaGGTCAAACCTCCCACCTAC +
Preference number: 4 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHKDWLL*VKPPTY
Trigger: GTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTT...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGGGCCTCGGCCTTTaGCCTTCCCACTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: YLCPVISFSAGCTLLLRWLGLGL*PSHSQI
Trigger: AATCTGAGAGTGGGAAGGCCAAAGGCCGAGGCCCAG...CCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTAGGCATGAAGCCACCATaGAGCTCCAGGCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: PAADRQEKESSCYPKALLGMKPP*SSRLLD
Trigger: GTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCC...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 72 bp AGGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATaGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTC +
Preference number: 4 (lower is better)
Translates to: RWEAQATPGMQG*ASLGQTSHLLL
Trigger: GAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCACCTTGGCCATCTTCATaGTGGCTGCATCCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: ISFSAGCTLLLRWLLGHPPWPSS*WLHPVL
Trigger: AAGAACGGGATGCAGCCATCATGAAGATGGCCAAGG...TGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTTGCCTGCGTTCACGCTaGAATCTGCATCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGACLRSR*NLHPGA
Trigger: TGCTCCTGGATGCAGATTTCAGCGTGAACGCAGGCA...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCTGCCACAGGGTGACTaGGGTCTTCCACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLELPQGD*GLPHRK
Trigger: CTTCCTGTGTGGAAGACCTCAGTCACCCTGTGGCAG...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAGGAACCTCCATCGGTTaGTCCCGACTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGGTSIG*SRLRRR
Trigger: CCTCCTCCTCAGTCGGGATCAACCGATGGAGGTTCC...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAAAATCTTCCAGAGACTaGAGTAGGAACCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPKSSRD*SRNLHR
Trigger: CCGATGGAGGTTCCTACTTCAGTCTCTGGAAGATTT...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTACTCCTCCTGGTAGAGTaGGTCAGTTTGACCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PAADRQEKESSCYPKALLLLLVE*VSLTLA
Trigger: GGCAAGGGTCAAACTGACTCACTCTACCAGGAGGAG...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGTACAGGAGATGGGTCTaGCCCCAGGGTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEYRRWV*PQGSGP
Trigger: TGGACCAGAACCCTGGGGTCAGACCCATCTCCTGTA...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGATCTGGGAACGGGCTaGCATGCTAGGGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETDLGTG*HARDGG
Trigger: TCCACCATCCCTAGCATGTCAGCCCGTTCCCAGATC...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTACTCCACTGGCAGGTTaGTCTGGGAACGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTTPLAG*SGNGLT
Trigger: TGTCAGCCCGTTCCCAGATCAACCTGCCAGTGGAGT...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTCAGGAGTGCACTGCCTaGCTCCACTGGCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTQECTA*LHWQVD
Trigger: ATCAACCTGCCAGTGGAGTCAGGCAGTGCACTCCTG...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACCTGGATCTCGGCCCTaGAGCTCTCCATCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTPGSRP*SSPSAG
Trigger: GCCAGCAGATGGAGAGCTGCAGGGCCGAGATCCAGG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTCCTGGATCTCGGCCCTaGAGCTCTCCATCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSPGSRP*SSPSAG
Trigger: GCCAGCAGATGGAGAGCTGCAGGGCCGAGATCCAGG...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCCTTCCGTTCCAAGTaGTTATCCAGGCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETAFRSK*LSRRAR
Trigger: TCTGGCCCGCCTGGATAAGCACTTGGAACGGAAGGC...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGGCCTTCCGTTCCAAGTaGTTATCCAGGCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEAFRSK*LSRRAR
Trigger: TCTGGCCCGCCTGGATAAGCACTTGGAACGGAAGGC...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGGGGAGAGGGGAGGTGTaGTGTTCCGCTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRGRGEV*CSASPF
Trigger: AAAAGGTGAAGCGGAACAGCACACCTCCCCTCTCCC...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAAGGGAGAGGGGAGGTGTaGTGTTCCGCTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKGRGEV*CSASPF
Trigger: AAAAGGTGAAGCGGAACAGCACACCTCCCCTCTCCC...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTTGGATCCAGCCCTCCTaGCTCAGTTGGGTCATGATG +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGAWIQPS*LSWVMM
Trigger: CATCATGACCCAACTGAGGCAGGAGGGCTGGATCCA...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACTGCACTGCTCATGCTaGCAGCCTGGCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTLHCSC*QPGSSW
Trigger: CCAGCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTCGGCTGCTTCCAGCTTaGGTTTGGGGGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSRLLPA*VWGMLG
Trigger: GCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCG...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTAGGTGGTTCCTCGGCTaGTTCCAGCTTGCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTRWFLG*FQLAFG
Trigger: CCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCT...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGAGGTGGTTCCTCGGCTaGTTCCAGCTTGCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLERWFLG*FQLAFG
Trigger: CCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCT...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGGGTTGGCAACTCTaGCACCCGGGCCCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVWGWQL*HPGPFA
Trigger: AGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCA...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAAGTCTCAGGCATCCTTaGTCGGCAGCTCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETSLRHP*SAALGL
Trigger: CAACCCCAGAGCTGCCGAGCAAGGATGCCTGAGACT...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGATGGGCACCCAGGCTTTaGTCACGGAGCAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSATGIADMAVWMLTSPGWAPRL*SRSKGS
Trigger: AGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCA...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACAGGTTGTACTCTGCTaGTGCGGTGGCTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGQVVLC*CGGCLG
Trigger: GCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTGGTGATCAGCTTCTCTaGAGGTTGTACTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLGDQLL*RLYSAA
Trigger: AGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACC...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGGAAACAGCACTGGCGTaGTACAGGTACTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEETALA*YRYSPS
Trigger: GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTC...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTAACAAGGCAGCTGGCTTaGAGGAACAGGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PAADRQEKESSCYPKALLTRQLA*RNRSQL
Trigger: CAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGT...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GAAGGGAGGCATGAAGCCACCATGGAGCTCCAGGCTACTGGACATACCCTCTCTGACAACAGCCAGAACTaGTGTGCTCCTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: EGRHEATMELQATGHTLSDNSQN*CAPAPQ
Trigger: CTGTGGAGCAGGAGCACAGCAGTTCTGGCTGTTGTC...AGAGAGGGTATGTCCAGTAGCCTGGAGCTCCATGGTGGCTTCATGCCTCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACTGGCAGCACTGTGGTaGCTTGGAGTGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGLAALW*LGVWPE
Trigger: CTCTGGCCACACTCCAAGGCACCACAGTGCTGCCAG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGCTGGCAGCACTGTGGTaGCTTGGAGTGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ILPATISSPCWPLGQDLRLAALW*LGVWPE
Trigger: CTCTGGCCACACTCCAAGGCACCACAGTGCTGCCAG...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTTGGACTTTTGCCAACTaGCCCTGGCAGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTWTFAN*PWQSPS
Trigger: GGATGGGGACTGCCAGGGGCAGTTGGCAAAAGTCCA...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCTGGACTTTTGCCAACTaGCCCTGGCAGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSWTFAN*PWQSPS
Trigger: GGATGGGGACTGCCAGGGGCAGTTGGCAAAAGTCCA...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACGAAAAGGAATCATCCTaGTACCCGAAGGCGCTGCTA +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYEKESS*YPKALL
Trigger: TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTC...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTGAAAAGGAATCATCCTaGTACCCGAAGGCGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLEKESS*YPKALL
Trigger: TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTC...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGGCTCCAGGAGTGCACTaGCTGACTCCACTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ILPATISSPCWPLGQDLRAPGVH*LTPLAG
Trigger: ACCTGCCAGTGGAGTCAGGCAGTGCACTCCTGGAGC...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAGCTCCAGGAGTGCACTaGCTGACTCCACTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGAPGVH*LTPLAG
Trigger: ACCTGCCAGTGGAGTCAGGCAGTGCACTCCTGGAGC...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCTGGGAACACGTCGGCTaGCTGTCCCCGGACTACAAA +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSWEHVG*LSPDYK
Trigger: TTTGTAGTCCGGGGACAGCCAGCCGACGTGTTCCCA...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCTCTCCATCTGCTGGCTaGTCACCAAGCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSSPSAG*SPSPLA
Trigger: AGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGA...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTGACCAAGTCCTTCAGTaGGGAACCCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPDQVLQ*GTPAPP
Trigger: TGGAGGAGCTGGGGTTCCCCACTGAAGGACTTGGTC...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTTCCCTGCCAGACAGCTaGACCAAGTCCTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTSLPDS*TKSFSG
Trigger: CCCACTGAAGGACTTGGTCCAGCTGTCTGGCAGGGA...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGGGGTCTCTCATAGTTaGCAACCCAGGCCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGAGVSHS*QPRPSV
Trigger: AACGGAAGGCCTGGGTTGCCAACTATGAGAGACCCC...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGGCCAGGAGGGAGTTaGCGTTCATTCGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPWPGGS*RSFGVS
Trigger: AGAGACCCCGAATGAACGCCAACTCCCTCCTGGCCA...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACGGATCTGGATGCAGATaGGGTTCCCCTCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNGSGCR*GSPPCG
Trigger: ACCGCATGGAGGGGAACCCCATCTGCATCCAGATCC...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGGGATCTGGATGCAGATaGGGTTCCCCTCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEGSGCR*GSPPCG
Trigger: ACCGCATGGAGGGGAACCCCATCTGCATCCAGATCC...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACGGTCCCAGGGGATCTaGATGCAGATGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTRSQGI*MQMGFP
Trigger: GGGGAACCCCATCTGCATCCAGATCCCCTGGGACCG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTGCATGCCGGGCCAGGTaGTGGATCCAGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLACRAR*WIQPSC
Trigger: GCAGGAGGGCTGGATCCACCACCTGGCCCGGCATGC...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAGTTCTTCACCAGGTaGTTCCTCGGCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGREFFTR*FLGCFQ
Trigger: CTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTC...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCTCGAGCCTTGTGTCTaGAGGCCGGGAAACAGCACT +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLELEPCV*RPGNST
Trigger: AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACACCAGGTGGCTACGTCTaGACAGCATCCATCCACTCC +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETPGGYV*TASIHS
Trigger: GGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGG...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCAGGTGGCTACGTCTaGACAGCATCCATCCACTCC +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEPGGYV*TASIHS
Trigger: GGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGG...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTAGAAACAGAGGCCAGGTaGCTACGTCTGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: PAADRQEKESSCYPKALLETEAR*LRLDSI
Trigger: GATGCTGTCCAGACGTAGCCACCTGGCCTCTGTTTC...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTTCACTGGCAGCACTGTaGTGCCTTGGAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTSLAAL*CLGVWP
Trigger: TGGCCACACTCCAAGGCACCACAGTGCTGCCAGTGA...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACTGCTCCTGGAAGGAATaGTGTTCTGGGTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHCSWKE*CSGCNL
Trigger: GAGATTACACCCAGAACACCATTCCTTCCAGGAGCA...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCAAGACTTGCTTTAGTTaGCCACCGTCGTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LLSLQVRKQELSRALAASKTCFS*PPSSFC
Trigger: GCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTT...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 72 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTaGGGTCAGGATTTGAGGCACTGTTCCGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ILPATISSPCWP*GQDLRHCSEGA
Trigger: GGCTCCCTCGGAACAGTGCCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTCACTCCCCATTCCTTaGACAGCCTTGGGAACACGT +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRSLPIP*TALGTR
Trigger: ACGTGTTCCCAAGGCTGTTCAAGGAATGGGGAGTGA...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCCTCAGTTGGGTCATaGTGGCATCAATCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGAASVGS*WHQSKG
Trigger: TCCCTTGGATTGATGCCATCATGACCCAACTGAGGC...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTTGGTCTCGGCATGGTTaGCGATGGGCCGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSWSRHG*RWAVGS
Trigger: ACTACCCACGGCCCATCGTCAACCATGCCGAGACCA...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGCAACATTCAGAATCATaGGTGTCAACAGATGCATGC +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQQHSES*VSTDAC
Trigger: GCATGCATCTGTTGACACTCATGATTCTGAATGTTG...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTGGAACCTCCATCGGTTaGTCCCGACTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSGTSIG*SRLRRR
Trigger: CCTCCTCCTCAGTCGGGATCAACCGATGGAGGTTCC...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGCTCCTGGGTAGGCTCTaGGGCTGGCTCTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ILPATISSPCWPLGQDLRLLGRL*GWLLAS
Trigger: AGAAGCTAAGAGCCAGCCTCAGAGCCTACCCAGGAG...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACCTCCTCCTGGTAGAGTaGGTCAGTTTGACCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNLLLVE*VSLTLA
Trigger: GGCAAGGGTCAAACTGACTCACTCTACCAGGAGGAG...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACATGGCAGTCTGGATGCTaGCAAGTCCAGGACAGGCCC +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTWQSGC*QVQDRP
Trigger: GGGCCTGTCCTGGACTTGTCAGCATCCAGACTGCCA...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGAGCCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTCCCCTCCCACGATaGTGGGACATTTCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: RASSRQAGKGIILLPEGAAPLPR*WDISSE
Trigger: TTCACTAGAAATGTCCCATCATCGTGGGAGGGGAGC...AGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTACCTTCCAGGTTTGCTTaGCTCTCTTTCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PAADRQEKESSCYPKALLPSRFA*LSFWQW
Trigger: CCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGG...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAGATCTGGGAACGGGCTaGCATGCTAGGGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGDLGTG*HARDGG
Trigger: TCCACCATCCCTAGCATGTCAGCCCGTTCCCAGATC...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAACTCCACTGGCAGGTTaGTCTGGGAACGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGTPLAG*SGNGLT
Trigger: TGTCAGCCCGTTCCCAGATCAACCTGCCAGTGGAGT...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGCCTTGGGTCAGGATTTaGGGCACTGTTCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ILPATISSPCWPLGQDLRPWVRI*GTVPRE
Trigger: CTCCCTCGGAACAGTGCCTCAAATCCTGACCCAAGG...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCACATCTTCATGATGGCTaGATCCCGTTCTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPHLHDG*IPFFPK
Trigger: TTTGGGAAAGAACGGGATGCAGCCATCATGAAGATG...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACGGGAGAGGGGAGGTGTaGTGTTCCGCTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNGRGEV*CSASPF
Trigger: AAAAGGTGAAGCGGAACAGCACACCTCCCCTCTCCC...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATCCAGGGCCTCAGGATTaGGGTCCCAGGGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHPGPQD*GPRGSG
Trigger: TCCAGATCCCCTGGGACCGCAATCCTGAGGCCCTGG...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGAAAGGGAAGCCTGTCTTaGCCTCAGCCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSATGIADMAVWMLTSPGKGSLS*PQPTWP
Trigger: TGGCCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTT...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACACCACATCCAGCTGCCTaGGTTCACGCTGAAATCTGC +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETPHPAA*VHAEIC
Trigger: GCAGATTTCAGCGTGAACGCAGGCAGCTGGATGTGG...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTGCTGGAAGAAAGCACTaGAGGACAGCCACATCCAGC +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPAGRKH*RTATSS
Trigger: GCTGGATGTGGCTGTCCTGCAGTGCTTTCTTCCAGC...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGGTCTTGGGCCTGCACTaGTCATGCTGCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: NLRISQEEACQCDGQLQEVLGLH*SCCQPG
Trigger: GCCAGGCTGGCAGCATGAGCAGTGCAGGCCCAAGAC...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTGTTGTACTCTGCTGCTaGGGTGGCTGCTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSVVLCC*GGCLGT
Trigger: GGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAAC...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGTGCTCGCTCTATCTCTaGCCGGTGATCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: YLCPVISFSAGCTLLLRWCSLYL*PVISFS
Trigger: AGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCA...CCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAATGAGTGTCAACAGATaGATGCACACACAAACAGGC +
Preference number: 4 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGAMSVNR*MHTQTG
Trigger: GCCTGTTTGTGTGTGCATGCATCTGTTGACACTCAT...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTACAAGGCAGCTGGCTTaGAGGAACAGGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPTRQLA*RNRSQL
Trigger: CAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGT...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGGCCTCCAGAATCCCATaGTTTGGACAACAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ITSSLVSGGRETALACYRASRIP*FGQQPE
Trigger: TTCTGGCTGTTGTCCAAAGCATGGGATTCTGGAGGC...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCCAGCAGGGCTCTGGCTaGCTCCAGAATCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLQQGSG*LQNPML
Trigger: AAGCATGGGATTCTGGAGGCAGCCAGAGCCCTGCTG...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAATCCCTGAGTCCCTCTaGCTGAGTCCTTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETIPESL*LSPWSS
Trigger: TGAGCTCCAAGGACTCAGGCAGAGGGACTCAGGGAT...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCTCTACTTGGACTTTTaGCAACTGCCCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLLYLDF*QLPLAV
Trigger: GACTGCCAGGGGCAGTTGGCAAAAGTCCAAGTAGAG...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCAGGCCACTCCTGGAATaGAAGGATTGGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLRPLLE*KDWLLW
Trigger: CCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCT...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGGTGGAAGGAAGACTTaGTTTAGTTGGCCACCGTCG +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRGGRKT*FSWPPS
Trigger: CGACGGTGGCCAACTAAAGCAAGTCTTCCTTCCACC...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTTGCCCTTCCAGGTTTaGTTGACTCTCTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLLPFQV*LTLFLA
Trigger: TGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAA...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCTTGCCCTTCCAGGTTTaGTTGACTCTCTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLLPFQV*LTLFLA
Trigger: TGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAA...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGTCGTCGTGGTTCTCCTaGATCTCGGCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWSSWFS*ISALQL
Trigger: GAGCTGCAGGGCCGAGATCCAGGAGAACCACGACGA...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGGGGGTCTCTCATAGTTaGCAACCCAGGCCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVGVSHS*QPRPSV
Trigger: AACGGAAGGCCTGGGTTGCCAACTATGAGAGACCCC...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCTGGCCAGGAGGGAGTTaGCGTTCATTCGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLWPGGS*RSFGVS
Trigger: AGAGACCCCGAATGAACGCCAACTCCCTCCTGGCCA...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCAGCATGCCGGGCCAGGTaGTGGATCCAGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSACRAR*WIQPSC
Trigger: GCAGGAGGGCTGGATCCACCACCTGGCCCGGCATGC...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCGTTGACGATGGGCCGTaGGTAGTCCACACCAATGAT +
Preference number: 4 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLVDDGP*VVHTND
Trigger: ATCATTGGTGTGGACTACCCACGGCCCATCGTCAAC...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTCGGCTGGTCTCGGCATaGTTGACGATGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLRLVSA*LTMGRG
Trigger: CCCACGGCCCATCGTCAACCATGCCGAGACCAGCCG...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCCTTCCAGCTTGCGTTTaGGGGATGCTGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVLPACV*GMLGHW
Trigger: CCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAG...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTCAGAATCCCATGCTTTaGACAACAGCCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLQNPML*TTARTA
Trigger: AGCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTG...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGGAAACAGAGGCCAGGTaGCTACGTCTGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEETEAR*LRLDSI
Trigger: GATGCTGTCCAGACGTAGCCACCTGGCCTCTGTTTC...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAAGCACTGTGGTGCCTTaGAGTGTGGCCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETSTVVP*SVARET
Trigger: GGTTTCTCTGGCCACACTCCAAGGCACCACAGTGCT...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGAGCACTGTGGTGCCTTaGAGTGTGGCCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLESTVVP*SVARET
Trigger: GGTTTCTCTGGCCACACTCCAAGGCACCACAGTGCT...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGAATGGTTTCCCTGGCTaGGTGTCAGCTGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRNGFPG*VSAVLT
Trigger: AGTGAGGACAGCTGACACCCAGCCAGGGAAACCATT...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCTCTGCCTGAGTCCTTaGAGCTCAGCTACTGGGATA +
Preference number: 4 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLLCLSP*SSATGI
Trigger: TATCCCAGTAGCTGAGCTCCAAGGACTCAGGCAGAG...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTGCTCCTGGAAGGAATaGTGTTCTGGGTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYCSWKE*CSGCNL
Trigger: GAGATTACACCCAGAACACCATTCCTTCCAGGAGCA...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAAAAGGATTGGCTTCTCTaGGTCAAACCTCCCACCTAC +
Preference number: 4 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQKDWLL*VKPPTY
Trigger: GTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTT...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGCACACACACACTTTGTaGCTCAAGTGCAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRHTHTL*LKCRPQ
Trigger: CTGTGGCCTGCACTTGAGCCACAAAGTGTGTGTGTG...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAACATACGTACAACAGTTaGACTCTAAAGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQHTYNS*TLKAAL
Trigger: GAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATG...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCAGAAGTAGGCGGAGGTaGTCCTGCCAACCTGTACCT +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSRSRRR*SCQPVP
Trigger: AGGTACAGGTTGGCAGGACCACCTCCGCCTACTTCT...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTAGAAGTAGGCGGAGGTaGTCCTGCCAACCTGTACCT +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPRSRRR*SCQPVP
Trigger: AGGTACAGGTTGGCAGGACCACCTCCGCCTACTTCT...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCCAGGGCCACCTGAGCTaGGAGAAGGGAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVQGHLS*EKGGMK
Trigger: CTTCATGCCTCCCTTCTCCCAGCTCAGGTGGCCCTG...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 72 bp ACACACGTACCACACACGCACACACACACACACACTTaGTGGCTCAAGTGCAGGCCACAGGGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: THVPHTHTHTHT*WLKCRPQGGRK
Trigger: CTTCCTTCCACCCTGTGGCCTGCACTTGAGCCACAAAGTGTGTGTGTGTGTGTGCGTGTGTGGTACGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 72 bp TCTGGGCCTCGGCCTTTGGCCTTCCCACTCTCAGATTaGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SGPRPLAFPLSD*PFQVCLTLFLA
Trigger: TGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATCTGAGAGTGGGAAGGCCAAAGGCCGAGGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACATCACTCCCCATTCCTTaGACAGCCTTGGGAACACGT +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETSLPIP*TALGTR
Trigger: ACGTGTTCCCAAGGCTGTTCAAGGAATGGGGAGTGA...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCTGCCTGCGTTCACGCTaGAATCTGCATCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLCLRSR*NLHPGA
Trigger: TGCTCCTGGATGCAGATTTCAGCGTGAACGCAGGCA...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGATGCCTGCGTTCACGCTaGAATCTGCATCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGCLRSR*NLHPGA
Trigger: TGCTCCTGGATGCAGATTTCAGCGTGAACGCAGGCA...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGTCTATCTCTGCCCGGTaGTCAGCTTCTCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLESISAR*SASLQV
Trigger: AACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGA...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCATTAGGTTCTAAATCCTaGAAAGGTAGGTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPLGSKS*KGRCAV
Trigger: GACAGCACACCTACCTTTTCAGGATTTAGAACCTAA...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCTGGGGAAGGAACAATaGCAGCTGGGATTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLLGKEQ*QLGFSF
Trigger: GAAAGAGAATCCCAGCTGTCATTGTTCCTTCCCCAG...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATTGGCAGTCTGGATGCTaGCAAGTCCAGGACAGGCCC +
Preference number: 4 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHWQSGC*QVQDRP
Trigger: GGGCCTGTCCTGGACTTGTCAGCATCCAGACTGCCA...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCAGAAGCCTGTCAGTGTaGTGGACAGCTACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLRSLSV*WTATGD
Trigger: ATCTCCTGTAGCTGTCCATCACACTGACAGGCTTCT...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAAAGAAGCCTGTCAGTGTaGTGGACAGCTACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKRSLSV*WTATGD
Trigger: ATCTCCTGTAGCTGTCCATCACACTGACAGGCTTCT...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTCCAGGTTTGCTTaGCTCTCTTTCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEPSRFA*LSFWQW
Trigger: CCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGG...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGACTCCACTGGCAGGTTaGTCTGGGAACGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLTPLAG*SGNGLT
Trigger: TGTCAGCCCGTTCCCAGATCAACCTGCCAGTGGAGT...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACAGGAGTGCACTGCCTaGCTCCACTGGCAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTQECTA*LHWQVD
Trigger: ATCAACCTGCCAGTGGAGTCAGGCAGTGCACTCCTG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACATCTTCATGATGGCTaGATCCCGTTCTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSHLHDG*IPFFPK
Trigger: TTTGGGAAAGAACGGGATGCAGCCATCATGAAGATG...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACAAAGGGAAGCCTGTCTTaGCCTCAGCCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTKGSLS*PQPTWP
Trigger: TGGCCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTT...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCCCACATCCAGCTGCCTaGGTTCACGCTGAAATCTGC +
Preference number: 4 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLPHPAA*VHAEIC
Trigger: GCAGATTTCAGCGTGAACGCAGGCAGCTGGATGTGG...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGCCACATCCAGCTGCCTaGGTTCACGCTGAAATCTGC +
Preference number: 4 (lower is better)
Translates to: ILPATISSPCWPLGQDLRPHPAA*VHAEIC
Trigger: GCAGATTTCAGCGTGAACGCAGGCAGCTGGATGTGG...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGCTGCAGGTTGTACTCTaGTGCTGCGGTGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLLQVVL*CCGGCL
Trigger: CAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAG...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCATGAGTGTCAACAGATaGATGCACACACAAACAGGC +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLMSVNR*MHTQTG
Trigger: GCCTGTTTGTGTGTGCATGCATCTGTTGACACTCAT...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACATGAGTGTCAACAGATaGATGCACACACAAACAGGC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYMSVNR*MHTQTG
Trigger: GCCTGTTTGTGTGTGCATGCATCTGTTGACACTCAT...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGGAAACAGCACTGGCGTaGTACAGGTACTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWETALA*YRYSPS
Trigger: GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTC...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTGTCTATGGCCTCATaGTCAGTCCCAGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSLSMAS*SVPEAQ
Trigger: TTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAG...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACACTCTACTTGGACTTTTaGCAACTGCCCCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: QLKVTAITSSLVSGGRETLYLDF*QLPLAV
Trigger: GACTGCCAGGGGCAGTTGGCAAAAGTCCAAGTAGAG...TGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTCCATCCCCTGTGCCCTaGTCCCCTCCCACGATGATG +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLPSPVP*SPPTMM
Trigger: CATCATCGTGGGAGGGGAGCAGGGCACAGGGGATGG...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATGCTCCAGGAGTGCACTaGCTGACTCCACTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHAPGVH*LTPLAG
Trigger: ACCTGCCAGTGGAGTCAGGCAGTGCACTCCTGGAGC...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCTTGTATGTAAGGGGTaGCTTCTGCCCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLLVCKG*LLPIQL
Trigger: GAGCTGAATGGGCAGAAGCCACCCCTTACATACAAG...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGTCGTCGTGGTTCTCCTaGATCTCGGCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMSSWFS*ISALQL
Trigger: GAGCTGCAGGGCCGAGATCCAGGAGAACCACGACGA...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGTGGGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACAGTGGAAGAACTGCTaGAAGAAAGCACTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GGRHRPLLECKDWLLWVKQWKNC*KKALQD
Trigger: GTCCTGCAGTGCTTTCTTCCAGCAGTTCTTCCACTG...TTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTACAGTGGAAGAACTGCTaGAAGAAAGCACTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PAADRQEKESSCYPKALLQWKNC*KKALQD
Trigger: GTCCTGCAGTGCTTTCTTCCAGCAGTTCTTCCACTG...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACGTTGACGATGGGCCGTaGGTAGTCCACACCAATGAT +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNVDDGP*VVHTND
Trigger: ATCATTGGTGTGGACTACCCACGGCCCATCGTCAAC...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACTCGAGCCTTGTGTCTaGAGGCCGGGAAACAGCACT +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTLEPCV*RPGNST
Trigger: AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAACTCAGCAGGGCTCTaGCTGCCTCCAGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGNSAGL*LPPESH
Trigger: ATGGGATTCTGGAGGCAGCCAGAGCCCTGCTGAGTT...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTCCAGGTGGCTACGTCTaGACAGCATCCATCCACTCC +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSPGGYV*TASIHS
Trigger: GGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGG...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGGCTCTTAGCTTCTaGGGAAGGAACAATGACAGC +
Preference number: 4 (lower is better)
Translates to: YLCPVISFSAGCTLLLRWLALSF*GRNNDS
Trigger: GCTGTCATTGTTCCTTCCCCAGAAGCTAAGAGCCAG...CCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGATACGCCACTGCAACCTaGTCTCCTCCTGGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: SSATGIADMAVWMLTSPGYATAT*SPPGRV
Trigger: CACTCTACCAGGAGGAGACCAGGTTGCAGTGGCGTA...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGGCTGACATGGCAGTCTaGATGCTGACAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVADMAV*MLTSPG
Trigger: TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGC...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TCGCTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCTCTGCCTGAGTCCTTaGAGCTCAGCTACTGGGATA +
Preference number: 4 (lower is better)
Translates to: SLYLCPVISFSAGCTLLLLCLSP*SSATGI
Trigger: TATCCCAGTAGCTGAGCTCCAAGGACTCAGGCAGAG...CAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGACCCACCTACTGCTCCTaGAAGGAATGGTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSATGIADMAVWMLTSPGPTYCS*KEWCSG
Trigger: CCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGG...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGAAGGATTGGCTTCTCTaGGTCAAACCTCCCACCTAC +
Preference number: 4 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVKDWLL*VKPPTY
Trigger: GTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTT...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGACAGGCCTTTGGCAGTaGGAAGGAAGAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLTGLWQ*EGRGGR
Trigger: CCTCCCACCTCTTCCTTCCCACTGCCAAAGGCCTGT...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACCTCAACACAGGCCTTTaGCAGTGGGAAGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNLNTGL*QWEGRG
Trigger: ACCTCTTCCTTCCCACTGCCAAAGGCCTGTGTTGAG...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCACACACACACTTTGTaGCTCAAGTGCAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEHTHTL*LKCRPQ
Trigger: CTGTGGCCTGCACTTGAGCCACAAAGTGTGTGTGTG...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGCTCTCTTTCTGGCAGTaGCCCGATTCTCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRLSFWQ*PDSLSS
Trigger: AGAGGAAAGAGAATCGGGCCACTGCCAGAAAGAGAG...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGGGCTGCCTTCTGAATTaGCTCTGGGGCATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMGCLLN*LWGIPG
Trigger: CCCTGGAATGCCCCAGAGTCAATTCAGAAGGCAGCC...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATCTGCCACAGGGTGACTaGGGTCTTCCACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHLPQGD*GLPHRK
Trigger: CTTCCTGTGTGGAAGACCTCAGTCACCCTGTGGCAG...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCTTAGGTTCTAAATCCTaGAAAGGTAGGTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLLGSKS*KGRCAV
Trigger: GACAGCACACCTACCTTTTCAGGATTTAGAACCTAA...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGCTGGGGAAGGAACAATaGCAGCTGGGATTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVLGKEQ*QLGFSF
Trigger: GAAAGAGAATCCCAGCTGTCATTGTTCCTTCCCCAG...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAACATCTTCATGATGGCTaGATCCCGTTCTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQHLHDG*IPFFPK
Trigger: TTTGGGAAAGAACGGGATGCAGCCATCATGAAGATG...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGGGGGTTGTTGGTAGCTaGCGTGTAGAAGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: ILPATISSPCWPLGQDLRGVVGS*RVEELS
Trigger: CGAGAGTTCTTCTACACGGCAGCTACCAACAACCCC...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGATCCAGCCCTCCTaGCTCAGTTGGGTCATGATG +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVWIQPS*LSWVMM
Trigger: CATCATGACCCAACTGAGGCAGGAGGGCTGGATCCA...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGTGGATCCAGCCCTCCTaGCTCAGTTGGGTCATGATG +
Preference number: 4 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLWIQPS*LSWVMM
Trigger: CATCATGACCCAACTGAGGCAGGAGGGCTGGATCCA...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCCCACATCCAGCTGCCTaGGTTCACGCTGAAATCTGC +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVPHPAA*VHAEIC
Trigger: GCAGATTTCAGCGTGAACGCAGGCAGCTGGATGTGG...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGGCTGGAAGAAAGCACTaGAGGACAGCCACATCCAGC +
Preference number: 4 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWAGRKH*RTATSS
Trigger: GCTGGATGTGGCTGTCCTGCAGTGCTTTCTTCCAGC...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTGTTGTACTCTGCTGCTaGGGTGGCTGCTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLVVLCC*GGCLGT
Trigger: GGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAAC...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCGGTGATCAGCTTCTCTaGAGGTTGTACTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSGDQLL*RLYSAA
Trigger: AGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACC...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAAATGAGTGTCAACAGATaGATGCACACACAAACAGGC +
Preference number: 4 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQMSVNR*MHTQTG
Trigger: GCCTGTTTGTGTGTGCATGCATCTGTTGACACTCAT...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGGAAACAGCACTGGCGTaGTACAGGTACTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: NLRISQEEACQCDGQLQEETALA*YRYSPS
Trigger: GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTC...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGAAACCTCCCACCTACTaGTCCTGGAAGGAATGGTGT +
Preference number: 4 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVKPPTY*SWKEWC
Trigger: ACACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTT...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTAAACCTCCCACCTACTaGTCCTGGAAGGAATGGTGT +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTKPPTY*SWKEWC
Trigger: ACACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTT...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGAAAGCCCCCAACCCAATaGTCTGAATGCACACCATCC +
Preference number: 4 (lower is better)
Translates to: SSATGIADMAVWMLTSPGKPPTQ*SECTPS
Trigger: GGATGGTGTGCATTCAGAGCATTGGGTTGGGGGCTT...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGTTGCCCTTCCAGGTTTaGTTGACTCTCTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRLPFQV*LTLFLA
Trigger: TGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAA...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCGAAAAGGAATCATCCTaGTACCCGAAGGCGCTGCTA +
Preference number: 4 (lower is better)
Translates to: QLACRNRSQLKVTAITSSEKESS*YPKALL
Trigger: TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTC...GCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTATACCCTCTCTACCCTaGCCTTCCCTCTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSIPSLP*PSLLAP
Trigger: TGGAGCCAAGAGGGAAGGGCAGGGTAGAGAGGGTAT...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTTTCCTTGAACAGCCTTaGGAACACGTCGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSFLEQP*EHVGWL
Trigger: CAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGAA...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACCTTGTATGTAAGGGGTaGCTTCTGCCCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNLVCKG*LLPIQL
Trigger: GAGCTGAATGGGCAGAAGCCACCCCTTACATACAAG...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGGACCAAGTCCTTCAGTaGGGAACCCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NLRISQEEACQCDGQLQEDQVLQ*GTPAPP
Trigger: TGGAGGAGCTGGGGTTCCCCACTGAAGGACTTGGTC...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAACTTCTGTAGGGTGGTaGAAACTTTTTAGATCTGTC +
Preference number: 4 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPTSVGW*KLFRSV
Trigger: GACAGATCTAAAAAGTTTCCACCACCCTACAGAAGT...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGTGTACTTCTGTAGGGTaGTGGAAACTTTTTAGATCT +
Preference number: 4 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQCTSVG*WKLFRS
Trigger: AGATCTAAAAAGTTTCCACCACCCTACAGAAGTACA...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACCTGGCTCTTAGCTTCTaGGGAAGGAACAATGACAGC +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNLALSF*GRNNDS
Trigger: GCTGTCATTGTTCCTTCCCCAGAAGCTAAGAGCCAG...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGAGCACTGTGGTGCCTTaGAGTGTGGCCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLSTVVP*SVARET
Trigger: GGTTTCTCTGGCCACACTCCAAGGCACCACAGTGCT...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGCTGACATGGCAGTCTaGATGCTGACAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLADMAV*MLTSPG
Trigger: TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGC...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGGTGTAATCTCTACTTaGACTTTTGCCAACTGCCCC +
Preference number: 4 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVGVIST*TFANCP
Trigger: GGGGCAGTTGGCAAAAGTCCAAGTAGAGATTACACC...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCTGGAATGCAAGGATTaGCTTCTCTGGGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLLECKD*LLWVKP
Trigger: AGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAG...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGAACTGGCAGGTTGATCTaGGAACGGGCTGACATGCTA +
Preference number: 4 (lower is better)
Translates to: SSATGIADMAVWMLTSPGTGRLI*ERADML
Trigger: TAGCATGTCAGCCCGTTCCCAGATCAACCTGCCAGT...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCACCTGCCCTTCCCTCTTaGCTCCAGGAGTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSPALPS*LQECTA
Trigger: GGCAGTGCACTCCTGGAGCCAAGAGGGAAGGGCAGG...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCGGAGCTCCAGGCTACTaGACATACCCTCTCTACCCT +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVGAPGY*TYPLYP
Trigger: AGGGTAGAGAGGGTATGTCCAGTAGCCTGGAGCTCC...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGATCTCTTCCCCATGCTaGCCCTTGGGTCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: ILPATISSPCWPLGQDLRISSPC*PLGQDL
Trigger: CAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGAT...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 72 bp CCTACCACTACGTTCTGTTCAGACAAGGCAGCTGGCTaGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: PTTTFCSDKAAG*QEQVSAESHCH
Trigger: ATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGTCTGAACAGAACGTAGTGGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
3UTR CAA 72 bp GCCTTCCCACTCTCAGATTTGCCCTTCCAGGTTTGCTaGACTCTCTTTCTGGCAGTGGCCCGATTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AFPLSDLPFQVC*TLFLAVARFSF
Trigger: GAAAGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATCTGAGAGTGGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTCGGCTGATGATGGCCTaGAAGCGCTTGTATGTAAGG +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSRLMMA*KRLYVR
Trigger: CCTTACATACAAGCGCTTTCAGGCCATCATCAGCCG...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACGGCTGATGATGGCCTaGAAGCGCTTGTATGTAAGG +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTRLMMA*KRLYVR
Trigger: CCTTACATACAAGCGCTTTCAGGCCATCATCAGCCG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TCGCTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGAAATCTTCCAGAGACTaGAGTAGGAACCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: SLYLCPVISFSAGCTLLLKSSRD*SRNLHR
Trigger: CCGATGGAGGTTCCTACTTCAGTCTCTGGAAGATTT...CAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCCCAACCCAATGCTCTaGATGCACACCATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMPNPML*MHTIPC
Trigger: ACAGGGGATGGTGTGCATTCAGAGCATTGGGTTGGG...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCCAGAAGCCCAAGGACCTTGGGTCAGGATTTaGGGCACTGTTCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GNFLDLSMASCSVPEAQGPWVRI*GTVPRE
Trigger: CTCCCTCGGAACAGTGCCTCAAATCCTGACCCAAGG...TCCTTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCGGGGTTGTTGGTAGCTaGCGTGTAGAAGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVGVVGS*RVEELS
Trigger: CGAGAGTTCTTCTACACGGCAGCTACCAACAACCCC...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCACAGGTTGTACTCTGCTaGTGCGGTGGCTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSQVVLC*CGGCLG
Trigger: GCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTG...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGTGCTCGCTCTATCTCTaGCCGGTGATCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWCSLYL*PVISFS
Trigger: AGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCA...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCAGGAGTCGCAGCCCTTTaGGGAACCAGTGCACCGAAG +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSGVAAL*GTSAPK
Trigger: CTTCGGTGCACTGGTTCCGCAAAGGGCTGCGACTCC...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGCTGTCTATGGCCTCATaGTCAGTCCCAGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLLSMAS*SVPEAQ
Trigger: TTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAG...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGAGGCCACTCCTGGAATaGAAGGATTGGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWRPLLE*KDWLLW
Trigger: CCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCT...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCAGGCCACTCCTGGAATaGAAGGATTGGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVRPLLE*KDWLLW
Trigger: CCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCT...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTGGTGGAAGGAAGACTTaGTTTAGTTGGCCACCGTCG +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSGGRKT*FSWPPS
Trigger: CGACGGTGGCCAACTAAAGCAAGTCTTCCTTCCACC...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTAAGCCCCCAACCCAATaGTCTGAATGCACACCATCC +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSKPPTQ*SECTPS
Trigger: GGATGGTGTGCATTCAGAGCATTGGGTTGGGGGCTT...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGCAGAATCCCATGCTTTaGACAACAGCCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVQNPML*TTARTA
Trigger: AGCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTG...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACACTTCTGTAGGGTGGTaGAAACTTTTTAGATCTGTC +
Preference number: 4 (lower is better)
Translates to: TSSLVSGGRETALACYRYTSVGW*KLFRSV
Trigger: GACAGATCTAAAAAGTTTCCACCACCCTACAGAAGT...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGTACGCCACTGCAACCTaGTCTCCTCCTGGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: NLRISQEEACQCDGQLQEYATAT*SPPGRV
Trigger: CACTCTACCAGGAGGAGACCAGGTTGCAGTGGCGTA...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCCAGAAGCCCAAGGAGTCAGCTGTCCTCACTaGCAGCACTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GNFLDLSMASCSVPEAQGVSCPH*QHCGAL
Trigger: CAAGGCACCACAGTGCTGCCAGTGAGGACAGCTGAC...TCCTTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACAAATGGTTTCCCTGGCTaGGTGTCAGCTGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTNGFPG*VSAVLT
Trigger: AGTGAGGACAGCTGACACCCAGCCAGGGAAACCATT...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTCTAGAATGGTTTCCCTaGCTGGGTGTCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSLEWFP*LGVSCP
Trigger: AGGACAGCTGACACCCAGCCAGGGAAACCATTCTAG...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGCTCTGCCTGAGTCCTTaGAGCTCAGCTACTGGGATA +
Preference number: 4 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLLCLSP*SSATGI
Trigger: TATCCCAGTAGCTGAGCTCCAAGGACTCAGGCAGAG...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACTGCTCCTGGAAGGAATaGTGTTCTGGGTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNCSWKE*CSGCNL
Trigger: GAGATTACACCCAGAACACCATTCCTTCCAGGAGCA...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTCTGGAATGCAAGGATTaGCTTCTCTGGGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTLECKD*LLWVKP
Trigger: AGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAG...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATGGCACAGGCCACTCCTaGAATGCAAGGATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHGTGHS*NARIGF
Trigger: GAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCC...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGAAATCTTCCAGAGACTaGAGTAGGAACCATGTGTGG +
Preference number: 4 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEKSSRD*SRNHVW
Trigger: CCACACATGGTTCCTACTTCAGTCTCTGGAAGATTT...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417225.6
CDS-3UTR TCA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATTCACTCCCCATTCCTTaGACAGCCTTGGGAACACGT +
Preference number: 4 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHSLPIP*TALGTR
Trigger: ACGTGTTCCCAAGGCTGTTCAAGGAATGGGGAGTGA...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCGGCTGATGATGGCCTaGAAGCGCTTGTATGTAAGG +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMRLMMA*KRLYVR
Trigger: CCTTACATACAAGCGCTTTCAGGCCATCATCAGCCG...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGGCCTCAGTTGGGTCATaGTGGCATCAATCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMASVGS*WHQSKG
Trigger: TCCCTTGGATTGATGCCATCATGACCCAACTGAGGC...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGCAACATTCAGAATCATaGGTGTCAACAGATGCATGC +
Preference number: 4 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRQHSES*VSTDAC
Trigger: GCATGCATCTGTTGACACTCATGATTCTGAATGTTG...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGCAACATTCAGAATCATaGGTGTCAACAGATGCATGC +
Preference number: 4 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVQHSES*VSTDAC
Trigger: GCATGCATCTGTTGACACTCATGATTCTGAATGTTG...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGAGCTACTGGGATAGCTaGCATGGCAGTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMSYWDS*HGSLDA
Trigger: AGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCT...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCACCTTGGGTCAGGATTTaGGGCACTGTTCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSPWVRI*GTVPRE
Trigger: CTCCCTCGGAACAGTGCCTCAAATCCTGACCCAAGG...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACAGGTGATCAGCTTCTCTaGAGGTTGTACTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTGDQLL*RLYSAA
Trigger: AGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACC...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCTCAGCTGAAAGTCACTaGCATAACCTCGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLSAESH*HNLEPC
Trigger: ACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTGCCTCCAGAATCCCATaGTTTGGACAACAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSASRIP*FGQQPE
Trigger: TTCTGGCTGTTGTCCAAAGCATGGGATTCTGGAGGC...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCACAGCAGGGCTCTGGCTaGCTCCAGAATCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSQQGSG*LQNPML
Trigger: AAGCATGGGATTCTGGAGGCAGCCAGAGCCCTGCTG...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCCAGAAGCCCAAGGATTCCTTGAACAGCCTTaGGAACACGTCGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GNFLDLSMASCSVPEAQGFLEQP*EHVGWL
Trigger: CAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGAA...TCCTTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCATCCCTGCCAGACAGCTaGACCAAGTCCTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSSLPDS*TKSFSG
Trigger: CCCACTGAAGGACTTGGTCCAGCTGTCTGGCAGGGA...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTGGGGTCTCTCATAGTTaGCAACCCAGGCCTTCCGTT +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLGVSHS*QPRPSV
Trigger: AACGGAAGGCCTGGGTTGCCAACTATGAGAGACCCC...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACAGTGGAAGAACTGCTaGAAGAAAGCACTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTQWKNC*KKALQD
Trigger: GTCCTGCAGTGCTTTCTTCCAGCAGTTCTTCCACTG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTGAGTTCTTCACCAGGTaGTTCCTCGGCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLEFFTR*FLGCFQ
Trigger: CTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTC...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCCAGAAGCCCAAGGAGAGTTCTTCACCAGGTaGTTCCTCGGCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GNFLDLSMASCSVPEAQGEFFTR*FLGCFQ
Trigger: CTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTC...TCCTTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGTTCAGACAAGGCAGCTaGCTTGCAGGAACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMFRQGS*LAGTGL
Trigger: GAGACCTGTTCCTGCAAGCCAGCTGCCTTGTCTGAA...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTAACTCAGCAGGGCTCTaGCTGCCTCCAGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLNSAGL*LPPESH
Trigger: ATGGGATTCTGGAGGCAGCCAGAGCCCTGCTGAGTT...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCATGTACTTCTGTAGGGTaGTGGAAACTTTTTAGATCT +
Preference number: 4 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSCTSVG*WKLFRS
Trigger: AGATCTAAAAAGTTTCCACCACCCTACAGAAGTACA...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCATCACTGGCAGCACTGTaGTGCCTTGGAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSSLAAL*CLGVWP
Trigger: TGGCCACACTCCAAGGCACCACAGTGCTGCCAGTGA...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACTGGAATGCAAGGATTaGCTTCTCTGGGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGLECKD*LLWVKP
Trigger: AGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCAACAGGCCTTTGGCAGTaGGAAGGAAGAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSTGLWQ*EGRGGR
Trigger: CCTCCCACCTCTTCCTTCCCACTGCCAAAGGCCTGT...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCCTCTCTTTCTGGCAGTaGCCCGATTCTCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVLSFWQ*PDSLSS
Trigger: AGAGGAAAGAGAATCGGGCCACTGCCAGAAAGAGAG...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTCCTTGGCCATCTTCATaGTGGCTGCATCCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLAPWPSS*WLHPVL
Trigger: AAGAACGGGATGCAGCCATCATGAAGATGGCCAAGG...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTGCCTCAGTTGGGTCATaGTGGCATCAATCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLASVGS*WHQSKG
Trigger: TCCCTTGGATTGATGCCATCATGACCCAACTGAGGC...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTTAGGTTCTAAATCCTaGAAAGGTAGGTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPLGSKS*KGRCAV
Trigger: GACAGCACACCTACCTTTTCAGGATTTAGAACCTAA...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGGGTGATCAGCTTCTCTaGAGGTTGTACTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMGDQLL*RLYSAA
Trigger: AGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACC...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGGCCTCCAGAATCCCATaGTTTGGACAACAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NLRISQEEACQCDGQLQEASRIP*FGQQPE
Trigger: TTCTGGCTGTTGTCCAAAGCATGGGATTCTGGAGGC...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCAAAATCTCTATAAAGTaGATTTTGCCTGCAACCATC +
Preference number: 4 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLKISIK*ILPATI
Trigger: GATGGTTGCAGGCAAAATGCACTTTATAGAGATTTT...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AACAGAGGCCAGGTGGCTACGTCTGGACAGCATCCATCCACTCCGGCCTGCTCAAAAATCTCTATAAAGTaGATTTTGCCTGCAACCATC +
Preference number: 4 (lower is better)
Translates to: NRGQVATSGQHPSTPACSKISIK*ILPATI
Trigger: GATGGTTGCAGGCAAAATGCACTTTATAGAGATTTT...TGAGCAGGCCGGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGGCCTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACAGAATCCCATGCTTTaGACAACAGCCAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTQNPML*TTARTA
Trigger: AGCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGAGGCCAGGTGGCTACGTCTGGACAGCATCCATCCACTCCGGCCTGCTCAAGGAACAATGACAGCTaGGATTCTCTTTCTAATTTT +
Preference number: 4 (lower is better)
Translates to: NRGQVATSGQHPSTPACSRNNDS*DSLSNF
Trigger: AAAATTAGAAAGAGAATCCCAGCTGTCATTGTTCCT...TGAGCAGGCCGGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGGCCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGGGTGTAATCTCTACTTaGACTTTTGCCAACTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWGVIST*TFANCP
Trigger: GGGGCAGTTGGCAAAAGTCCAAGTAGAGATTACACC...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACAGGTGTAATCTCTACTTaGACTTTTGCCAACTGCCCC +
Preference number: 4 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTGVIST*TFANCP
Trigger: GGGGCAGTTGGCAAAAGTCCAAGTAGAGATTACACC...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTCTCAACACAGGCCTTTaGCAGTGGGAAGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLLNTGL*QWEGRG
Trigger: ACCTCTTCCTTCCCACTGCCAAAGGCCTGTGTTGAG...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGACATACGTACAACAGTTaGACTCTAAAGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSATGIADMAVWMLTSPGHTYNS*TLKAAL
Trigger: GAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATG...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACATACGTACAACAGTTaGACTCTAAAGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGHTYNS*TLKAAL
Trigger: GAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCTCTCTTTCTGGCAGTaGCCCGATTCTCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMLSFWQ*PDSLSS
Trigger: AGAGGAAAGAGAATCGGGCCACTGCCAGAAAGAGAG...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGAAATCTTCCAGAGACTaGAGTAGGAACCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: NLRISQEEACQCDGQLQEKSSRD*SRNLHR
Trigger: CCGATGGAGGTTCCTACTTCAGTCTCTGGAAGATTT...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCGTCGTCCTTTTGCATaGCATCTTTCTCAACACAGG +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMRRPFA*HLSQHR
Trigger: CCTGTGTTGAGAAAGATGTCATGCAAAAGGACGACG...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCAGCTCCCCTCCCACGATaGTGGGACATTTCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSAPLPR*WDISSE
Trigger: TTCACTAGAAATGTCCCATCATCGTGGGAGGGGAGC...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCATGCTCGCTCTATCTCTaGCCGGTGATCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSCSLYL*PVISFS
Trigger: AGAGAAGCTGATCACCGGGCAGAGATAGAGCGAGCA...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATTCAGCTGAAAGTCACTaGCATAACCTCGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHSAESH*HNLEPC
Trigger: ACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTCTTGTATGTAAGGGGTaGCTTCTGCCCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLALVCKG*LLPIQL
Trigger: GAGCTGAATGGGCAGAAGCCACCCCTTACATACAAG...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TCGCTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGACTTCTGTAGGGTGGTaGAAACTTTTTAGATCTGTC +
Preference number: 4 (lower is better)
Translates to: SLYLCPVISFSAGCTLLLTSVGW*KLFRSV
Trigger: GACAGATCTAAAAAGTTTCCACCACCCTACAGAAGT...CAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAAAGGAACAATGACAGCTaGGATTCTCTTTCTAATTTT +
Preference number: 4 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQRNNDS*DSLSNF
Trigger: AAAATTAGAAAGAGAATCCCAGCTGTCATTGTTCCT...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp AGGAAGACTTGCTTTAGTTGGCCACCGTCGTCCTTTTGCATGACATCTTTCTCAAATGGTTTCCCTGGCTaGGTGTCAGCTGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: RKTCFSWPPSSFCMTSFSNGFPG*VSAVLT
Trigger: AGTGAGGACAGCTGACACCCAGCCAGGGAAACCATT...TGAGAAAGATGTCATGCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTCGTCGTCCTTTTGCATaGCATCTTTCTCAACACAGG +
Preference number: 4 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLRRPFA*HLSQHR
Trigger: CCTGTGTTGAGAAAGATGTCATGCAAAAGGACGACG...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp GGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCCAGAAGCCCAAGGAAAGACTTGCTTTAGTTaGCCACCGTCGTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GNFLDLSMASCSVPEAQGKTCFS*PPSSFC
Trigger: GCAAAAGGACGACGGTGGCCAACTAAAGCAAGTCTT...TCCTTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR TCA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATCAACATTCAGAATCATaGGTGTCAACAGATGCATGC +
Preference number: 4 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHQHSES*VSTDAC
Trigger: GCATGCATCTGTTGACACTCATGATTCTGAATGTTG...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CCA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAACAATGACAGCTaGGATTCTCTTTCTAATTTT +
Preference number: 4 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGRNNDS*DSLSNF
Trigger: AAAATTAGAAAGAGAATCCCAGCTGTCATTGTTCCT...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR GCA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGAAAATCTCTATAAAGTaGATTTTGCCTGCAACCATC +
Preference number: 4 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMKISIK*ILPATI
Trigger: GATGGTTGCAGGCAAAATGCACTTTATAGAGATTTT...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS GCA 90 bp CGAAGAGGCGCTGTCCGTGCCGGGCGCTGGCGCCGGGGCCACAGCTaGCGCCGTCGCCACAGTCGCCGCCATGACTGTCCAGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RRGAVRAGRWRRGHS*RRRHSRRHDCPDCS
Trigger: GGAGCAGTCTGGACAGTCATGGCGGCGACTGTGGCGACGGCGGCAGCTGTGGCCCCGGCGCCAGCGCCCGGCACGGACAGCGCCTCTTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443527.6
ENST00000616623.4
CDS GCA 90 bp CACAGCTGCCGCCGTCGCCACAGTCGCCGCCATGACTGTCCAGACTaGTCCAGCCACCCCCGCTCCGCCCCGGTAGGCGACGTGGACCCC +
Preference number: 5 (lower is better)
Translates to: HSCRRRHSRRHDCPD*SSHPRSAPVGDVDP
Trigger: GGGGTCCACGTCGCCTACCGGGGCGGAGCGGGGGTGGCTGGAGCAGTCTGGACAGTCATGGCGGCGACTGTGGCGACGGCGGCAGCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443527.6
ENST00000616623.4
CDS-3UTR CAA 90 bp CTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTGCCAGGGCCTCAGGATaGCGGTCCCAGGGGATCTGG +
Preference number: 5 (lower is better)
Translates to: LLLRWLLGHPGFAHGARAARASG*RSQGIW
Trigger: CCAGATCCCCTGGGACCGCAATCCTGAGGCCCTGGC...AGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGCCAGGGCCTCAGGATaGCGGTCCCAGGGGATCTGG +
Preference number: 5 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHARASG*RSQGIW
Trigger: CCAGATCCCCTGGGACCGCAATCCTGAGGCCCTGGC...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCTGCAGTCAAGGGAAGCCTGTCTaGCCCTCAGCCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: CGGCLGTQALLTEQGLCSQGKPV*PSAHLA
Trigger: GGCCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTTG...ACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGCTTCCAGCTTGCGTTaGGGGGATGCTGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQASSLR*GDAGPL
Trigger: CAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGC...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCTGCAGTGCCACCCGGGCCCGTTaGCTGAGTTCTTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: CGGCLGTQALLTEQGLCSATRAR*LSSSPG
Trigger: ACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGC...ACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCTCGGCAGCTCTGGGGTaGGCAACTCTGCCACCCGGG +
Preference number: 5 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLSAALG*ATLPPG
Trigger: CCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGA...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAATGCTGCGGTGGCTGCTaGGGCACCCAGGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: VLCCCGGCLGTQALLTEQCCGGC*GTQALL
Trigger: GAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCA...TTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGGACTCCACTGGCAGGTaGATCTGGGAACGGGCTGAC +
Preference number: 5 (lower is better)
Translates to: VWRPGNSTGVLQVLPQPRDSTGR*IWERAD
Trigger: GTCAGCCCGTTCCCAGATCAACCTGCCAGTGGAGTC...CCTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp TCGTCGTGGTTCTCCTGGATCTCGGCCCTGCAGCTCTCCATCTGCTaGCTGGTCACCAAGCCCACTGGCTTCTTGGGCAGCTCCATGCGG +
Preference number: 5 (lower is better)
Translates to: SSWFSWISALQLSIC*LVTKPTGFLGSSMR
Trigger: CCGCATGGAGCTGCCCAAGAAGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGAGCTGCAGGGCCGAGATCCAGGAGAACCACGACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000533779.1
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp TGGCAACTCTGCCACCCGGGCCCGTTTGCTGAGTTCTTCACCAGGTaGTTCCTCGGCTGCTTCCAGCTTGCGTTTGGGGGATGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: WQLCHPGPFAEFFTR*FLGCFQLAFGGCWA
Trigger: GGCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGCAGAGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp CGGAGCAAGGGCTCTGCAGTCTCAGGCATCCTTGCTCGGCAGCTCTaGGGTTGGCAACTCTGCCACCCGGGCCCGTTTGCTGAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSKGSAVSGILARQL*GWQLCHPGPFAEFF
Trigger: GAAGAACTCAGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGAGCAAGGATGCCTGAGACTGCAGAGCCCTTGCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCTGGCCAGGAGGGAGTaGGCGTTCATTCGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LVSGGRETALACYRYSPSLARRE*AFIRGL
Trigger: GAGACCCCGAATGAACGCCAACTCCCTCCTGGCCAG...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGCCACCCGGGCCCGTTaGCTGAGTTCTTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHATRAR*LSSSPG
Trigger: ACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGC...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCTGCTGCGGTGGCTGCTaGGGCACCCAGGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLCCGGC*GTQALL
Trigger: GAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCA...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGGCCAGCAACGCCGGGTaGTCGTGGAGTCGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: ITSSLVSGGRETALACYRASNAG*SWSRSP
Trigger: AGGGCTGCGACTCCACGACAACCCGGCGTTGCTGGC...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS TCA 90 bp TCGGCAGCTCTGGGGTTGGCAACTCTGCCACCCGGGCCCGTTTGCTaGGTTCTTCACCAGGTGGTTCCTCGGCTGCTTCCAGCTTGCGTT +
Preference number: 5 (lower is better)
Translates to: SAALGLATLPPGPVC*VLHQVVPRLLPACV
Trigger: AACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS GCA 90 bp GTCTCGTCGTGGTTCTCCTGGATCTCGGCCCTGCAGCTCTCCATCTaGTGGCTGGTCACCAAGCCCACTGGCTTCTTGGGCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: VSSWFSWISALQLSI*WLVTKPTGFLGSSM
Trigger: CATGGAGCTGCCCAAGAAGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGAGCTGCAGGGCCGAGATCCAGGAGAACCACGACGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000533779.1
ENST00000616080.2
ENST00000616623.4
CDS GCA 90 bp GCAGTCTCAGGCATCCTTGCTCGGCAGCTCTGGGGTTGGCAACTCTaGCACCCGGGCCCGTTTGCTGAGTTCTTCACCAGGTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: AVSGILARQLWGWQL*HPGPFAEFFTRWFL
Trigger: GAGGAACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGAGCAAGGATGCCTGAGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS GCA 90 bp AGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTaGTCACGGAGCAAGGGCTCTGCAGTCTCAGGCATCCTTGCTCGG +
Preference number: 5 (lower is better)
Translates to: RLYSAAAVAAWAPRL*SRSKGSAVSGILAR
Trigger: CCGAGCAAGGATGCCTGAGACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS GCA 90 bp CCTGGGAGAGAGGCGAGGAGTAATCAGAGTGCCGTCTCGCAGGATTaGAGAGGGCTACAGGGCAGGATGAAGCAAGTGGGGGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PGREARSNQSAVSQD*RGLQGRMKQVGVGR
Trigger: CCTCCCCACCCCCACTTGCTTCATCCTGCCCTGTAGCCCTCTGCAATCCTGCGAGACGGCACTCTGATTACTCCTCGCCTCTCTCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488962.1
CDS CCA 90 bp AAGGGCTCTGCAGTCTCAGGCATCCTTGCTCGGCAGCTCTGGGGTTaGCAACTCTGCCACCCGGGCCCGTTTGCTGAGTTCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: KGSAVSGILARQLWG*QLCHPGPFAEFFTR
Trigger: CCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGAGCAAGGATGCCTGAGACTGCAGAGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCAAAGCCCACTGGCTTCTaGGGCAGCTCCATGCGGCTG +
Preference number: 5 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSKPTGF*GSSMRL
Trigger: CAGCCGCATGGAGCTGCCCAAGAAGCCAGTGGGCTT...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGGCCAGGGCCTCAGGATaGCGGTCCCAGGGGATCTGG +
Preference number: 5 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRARASG*RSQGIW
Trigger: CCAGATCCCCTGGGACCGCAATCCTGAGGCCCTGGC...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTCAAGGGAAGCCTGTCTaGCCCTCAGCCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLQGKPV*PSAHLA
Trigger: GGCCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTTG...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCCTCCCACTGGGTAGTGGTCTaGGGCCTGCACTGCTCATGC +
Preference number: 5 (lower is better)
Translates to: LLSLQVRKQELSRALAASHWVVV*GLHCSC
Trigger: GCATGAGCAGTGCAGGCCCAAGACCACTACCCAGTG...GGAGGCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACGCTTCCAGCTTGCGTTaGGGGGATGCTGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: TSSLVSGGRETALACYRYASSLR*GDAGPL
Trigger: CAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGC...GTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCTTGGGCACCCAGGCTTaGCTCACGGAGCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLLGTQA*LTEQGL
Trigger: GAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAA...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAATGCTGCGGTGGCTGCTaGGGCACCCAGGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQCCGGC*GTQALL
Trigger: GAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCA...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCCAGGACAAGGCAGCTGGCTaGCAGGAACAGGTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: CLEAGKQHWRATGTPPAQDKAAG*QEQVSA
Trigger: AGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGTC...CTGGGCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCTGCAGTCAGCACTGTGGTGCCTaGGAGTGTGGCCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: CGGCLGTQALLTEQGLCSQHCGA*ECGQRN
Trigger: GTTTCTCTGGCCACACTCCAAGGCACCACAGTGCTG...ACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCATCCCCATGCTGGCCCTaGGGTCAGGATTTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGASPCWP*GQDLRH
Trigger: GTGCCTCAAATCCTGACCCAAGGGCCAGCATGGGGA...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGCCAGGGCCTCAGGATaGCGGTCCCAGGGGATCTGG +
Preference number: 5 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTARASG*RSQGIW
Trigger: CCAGATCCCCTGGGACCGCAATCCTGAGGCCCTGGC...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACACTGGGTAGTGGTCTaGGGCCTGCACTGCTCATGC +
Preference number: 5 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSHWVVV*GLHCSC
Trigger: GCATGAGCAGTGCAGGCCCAAGACCACTACCCAGTG...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCCAGCTTCTCTGCAGGTaGTACTCTGCTGCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: LVSGGRETALACYRYSPSQLLCR*YSAAAV
Trigger: CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTG...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGCCAGCAACGCCGGGTaGTCGTGGAGTCGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTASNAG*SWSRSP
Trigger: AGGGCTGCGACTCCACGACAACCCGGCGTTGCTGGC...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGGCCAGCAACGCCGGGTaGTCGTGGAGTCGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVASNAG*SWSRSP
Trigger: AGGGCTGCGACTCCACGACAACCCGGCGTTGCTGGC...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCACAGCACTGTGGTGCCTaGGAGTGTGGCCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPQHCGA*ECGQRN
Trigger: GTTTCTCTGGCCACACTCCAAGGCACCACAGTGCTG...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp GATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTaGGCACCCAGGCTTTGCTCACGGAGCAAGGGCTCTGCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: DQLLCRLYSAAAVAA*APRLCSRSKGSAVS
Trigger: TGAGACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp CTCACTGTCTTCTCTGGGGCTCTGCACGCTTACCTTGAACAGCCTTaGGAACACGTCGGCTGGCTGTCCCCGGACTACAAACAGGCGGGA +
Preference number: 5 (lower is better)
Translates to: LTVFSGALHAYLEQP*EHVGWLSPDYKQAG
Trigger: TCCCGCCTGTTTGTAGTCCGGGGACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGTAAGCGTGCAGAGCCCCAGAGAAGACAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS-3UTR CAA 90 bp TATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGGCCAGGAGGGAGTaGGCGTTCATTCGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: YLCPVISFSAGCTLLLRWLARRE*AFIRGL
Trigger: GAGACCCCGAATGAACGCCAACTCCCTCCTGGCCAG...CCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGCTGGCCAGGAGGGAGTaGGCGTTCATTCGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRLARRE*AFIRGL
Trigger: GAGACCCCGAATGAACGCCAACTCCCTCCTGGCCAG...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGCAAGGGAAGCCTGTCTaGCCCTCAGCCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRQGKPV*PSAHLA
Trigger: GGCCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTTG...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCGCCACCCGGGCCCGTTaGCTGAGTTCTTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLATRAR*LSSSPG
Trigger: ACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGC...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGATCGGCAGCTCTGGGGTaGGCAACTCTGCCACCCGGG +
Preference number: 5 (lower is better)
Translates to: SSATGIADMAVWMLTSPGSAALG*ATLPPG
Trigger: CCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGA...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACTGCTGCGGTGGCTGCTaGGGCACCCAGGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNCCGGC*GTQALL
Trigger: GAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCA...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCAGCTTCTCTGCAGGTaGTACTCTGCTGCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: LEPCVWRPGNSTGVLQVLQLLCR*YSAAAV
Trigger: CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTG...GAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACGGAGCATCTCAACACAGGCCTTaGGCAGTGGGAAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: CTLLLRWLLGHPGFAHGASQHRP*AVGRKR
Trigger: CCTCTTCCTTCCCACTGCCAAAGGCCTGTGTTGAGA...TGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTCTGGGCCTCGGCCTTaGGCCTTCCCACTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: ITSSLVSGGRETALACYRSGPRP*AFPLSD
Trigger: ATCTGAGAGTGGGAAGGCCAAAGGCCGAGGCCCAGA...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGGACTCCACTGGCAGGTaGATCTGGGAACGGGCTGAC +
Preference number: 5 (lower is better)
Translates to: ITSSLVSGGRETALACYRDSTGR*IWERAD
Trigger: GTCAGCCCGTTCCCAGATCAACCTGCCAGTGGAGTC...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTGTCACTCCCCATTCCTaGAACAGCCTTGGGAACACG +
Preference number: 5 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLVTPHS*NSLGNT
Trigger: CGTGTTCCCAAGGCTGTTCAAGGAATGGGGAGTGAC...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTCAAGGGAAGCCTGTCTaGCCCTCAGCCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTQGKPV*PSAHLA
Trigger: GGCCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTTG...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGGGAACGCTTTCAATTaGGGCAGGTATCGCCTGATG +
Preference number: 5 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPGNAFN*GRYRLM
Trigger: CATCAGGCGATACCTGCCCAAATTGAAAGCGTTCCC...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGCACTGGGTAGTGGTCTaGGGCCTGCACTGCTCATGC +
Preference number: 5 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRHWVVV*GLHCSC
Trigger: GCATGAGCAGTGCAGGCCCAAGACCACTACCCAGTG...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTCGGCTGCTTCCAGCTaGCGTTTGGGGGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: AGLQEQVSAESHCHNLEPSAASS*RLGDAG
Trigger: CCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGA...AGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACTCGGCTGCTTCCAGCTaGCGTTTGGGGGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNSAASS*RLGDAG
Trigger: CCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGA...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTCGGCAGCTCTGGGGTaGGCAACTCTGCCACCCGGG +
Preference number: 5 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVSAALG*ATLPPG
Trigger: CCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGA...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGCCTCTGCCTGAGTCCTaGGAGCTCAGCTACTGGGAT +
Preference number: 5 (lower is better)
Translates to: ITSSLVSGGRETALACYRPLPES*ELSYWD
Trigger: ATCCCAGTAGCTGAGCTCCAAGGACTCAGGCAGAGG...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAACCTCTGCCTGAGTCCTaGGAGCTCAGCTACTGGGAT +
Preference number: 5 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQPLPES*ELSYWD
Trigger: ATCCCAGTAGCTGAGCTCCAAGGACTCAGGCAGAGG...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCATCTCTACTTGGACTTTaGCCAACTGCCCCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: ALCLEAGKQHWRATGTPPSLLGL*PTAPGS
Trigger: ACTGCCAGGGGCAGTTGGCAAAAGTCCAAGTAGAGA...TGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS TCA 90 bp GGGACAGAATCTCACTGTCTTCTCTGGGGCTCTGCACGCTTACCTTaGACAGCCTTGGGAACACGTCGGCTGGCTGTCCCCGGACTACAA +
Preference number: 5 (lower is better)
Translates to: GTESHCLLWGSARLP*TALGTRRLAVPGLQ
Trigger: TTGTAGTCCGGGGACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGTAAGCGTGCAGAGCCCCAGAGAAGACAGTGAGATTCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS GCA 90 bp GGGGAAACCGTCAGGGACAGAATCTCACTGTCTTCTCTGGGGCTCTaGACGCTTACCTTGAACAGCCTTGGGAACACGTCGGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GETVRDRISLSSLGL*TLTLNSLGNTSAGC
Trigger: ACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGTAAGCGTGCAGAGCCCCAGAGAAGACAGTGAGATTCTGTCCCTGACGGTTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS-3UTR CAA 90 bp ATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTCCACACCAGCCTCCTaGGCCATCTTCATGATGGCT +
Preference number: 5 (lower is better)
Translates to: ITSSLVSGGRETALACYRSTPAS*AIFMMA
Trigger: AGCCATCATGAAGATGGCCAAGGAGGCTGGTGTGGA...CCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGAAGCCCACTGGCTTCTaGGGCAGCTCCATGCGGCTG +
Preference number: 5 (lower is better)
Translates to: ILPATISSPCWPLGQDLRKPTGF*GSSMRL
Trigger: CAGCCGCATGGAGCTGCCCAAGAAGCCAGTGGGCTT...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCACTGGGTAGTGGTCTaGGGCCTGCACTGCTCATGC +
Preference number: 5 (lower is better)
Translates to: AAGLQEQVSAESHCHNLEHWVVV*GLHCSC
Trigger: GCATGAGCAGTGCAGGCCCAAGACCACTACCCAGTG...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AAGGCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGCTTCCAGCTTGCGTTaGGGGGATGCTGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: KAAGLQEQVSAESHCHNLASSLR*GDAGPL
Trigger: CAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGC...GAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATTCGGCAGCTCTGGGGTaGGCAACTCTGCCACCCGGG +
Preference number: 5 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHSAALG*ATLPPG
Trigger: CCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGA...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCAGCACTGTGGTGCCTaGGAGTGTGGCCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLQHCGA*ECGQRN
Trigger: GTTTCTCTGGCCACACTCCAAGGCACCACAGTGCTG...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGCCTCTGCCTGAGTCCTaGGAGCTCAGCTACTGGGAT +
Preference number: 5 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRPLPES*ELSYWD
Trigger: ATCCCAGTAGCTGAGCTCCAAGGACTCAGGCAGAGG...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTTGTGTCTGGAGGCCGGGAAACAGCACTGGCGTGCTACAGGTACTCCCCCAGCGGGTGTAATCTCTACTaGGACTTTTGCCAACTGCCC +
Preference number: 5 (lower is better)
Translates to: LVSGGRETALACYRYSPSGCNLY*DFCQLP
Trigger: GGGCAGTTGGCAAAAGTCCAAGTAGAGATTACACCC...GCTGGGGGAGTACCTGTAGCACGCCAGTGCTGTTTCCCGGCCTCCAGACACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AACAGAGGCCAGGTGGCTACGTCTGGACAGCATCCATCCACTCCGGCCTGCTCACCTGGAATGCAAGGATaGGCTTCTCTGGGTCAAACC +
Preference number: 5 (lower is better)
Translates to: NRGQVATSGQHPSTPACSPGMQG*ASLGQT
Trigger: GGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGG...TGAGCAGGCCGGAGTGGATGGATGCTGTCCAGACGTAGCCACCTGGCCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAATCTCAACACAGGCCTTaGGCAGTGGGAAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQSQHRP*AVGRKR
Trigger: CCTCTTCCTTCCCACTGCCAAAGGCCTGTGTTGAGA...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCACTTTGCCCTTCCAGGTTaGCTTGACTCTCTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: AGCTLLLRWLLGHPGFAHFALPG*LDSLSG
Trigger: GCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAA...GTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGCCCTTGGGTCAGGATTaGAGGCACTGTTCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: LSLPGDQLLCRLYSAAAVPLGQD*RHCSEG
Trigger: TCCCTCGGAACAGTGCCTCAAATCCTGACCCAAGGG...CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TCGCTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGTCCCCATGCTGGCCCTaGGGTCAGGATTTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: SLYLCPVISFSAGCTLLLSPCWP*GQDLRH
Trigger: GTGCCTCAAATCCTGACCCAAGGGCCAGCATGGGGA...CAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS TCA 90 bp AAGCCCACTGGCTTCTTGGGCAGCTCCATGCGGCTGATGATGGCCTaGAAGCGCTTGTATGTAAGGGGTGGCTTCTGCCCATTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: KPTGFLGSSMRLMMA*KRLYVRGGFCPFSS
Trigger: TGAGCTGAATGGGCAGAAGCCACCCCTTACATACAAGCGCTTTCAGGCCATCATCAGCCGCATGGAGCTGCCCAAGAAGCCAGTGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000533779.1
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTAAGCCCACTGGCTTCTaGGGCAGCTCCATGCGGCTG +
Preference number: 5 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSKPTGF*GSSMRL
Trigger: CAGCCGCATGGAGCTGCCCAAGAAGCCAGTGGGCTT...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTCTGGCCAGGAGGGAGTaGGCGTTCATTCGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSLARRE*AFIRGL
Trigger: GAGACCCCGAATGAACGCCAACTCCCTCCTGGCCAG...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTTTGGGCACCCAGGCTTaGCTCACGGAGCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSLGTQA*LTEQGL
Trigger: GAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAA...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACGACAAGGCAGCTGGCTaGCAGGAACAGGTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNDKAAG*QEQVSA
Trigger: AGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGTC...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTGACAAGGCAGCTGGCTaGCAGGAACAGGTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTDKAAG*QEQVSA
Trigger: AGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGTC...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAAGGAATGGTGAGGAACCTCCATCGGTaGATCCCGACTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GLASLGQTSHLLLLEGMVRNLHR*IPTEEE
Trigger: CTCCTCCTCAGTCGGGATCAACCGATGGAGGTTCCT...CACCATTCCTTCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTAGGAACCTCCATCGGTaGATCCCGACTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTRNLHR*IPTEEE
Trigger: CTCCTCCTCAGTCGGGATCAACCGATGGAGGTTCCT...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGTCTCAACACAGGCCTTaGGCAGTGGGAAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRSQHRP*AVGRKR
Trigger: CCTCTTCCTTCCCACTGCCAAAGGCCTGTGTTGAGA...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAACACACACACACACTTaGTGGCTCAAGTGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: ISFSAGCTLLLRWLLGHPTHTHT*WLKCRP
Trigger: TGGCCTGCACTTGAGCCACAAAGTGTGTGTGTGTGT...TGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CGGCCTGCTCAGCCTCCAGGTCAGAAAGCAGGAACTCAGCAGGGCTCTGGCTGCACATACGTACAACAGTaGGACTCTAAAGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RPAQPPGQKAGTQQGSGCTYVQQ*DSKGSS
Trigger: AGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGT...GCAGCCAGAGCCCTGCTGAGTTCCTGCTTTCTGACCTGGAGGCTGAGCAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAGACTCCACTGGCAGGTaGATCTGGGAACGGGCTGAC +
Preference number: 5 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGDSTGR*IWERAD
Trigger: GTCAGCCCGTTCCCAGATCAACCTGCCAGTGGAGTC...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp GGCTGGCCAGGAGGGAGTTGGCGTTCATTCGGGGTCTCTCATAGTTaGCAACCCAGGCCTACAGCAGAAAGAGAAGGTGGCAAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: GWPGGSWRSFGVSHS*QPRPTAEREGGKRK
Trigger: TTTCCTTTTGCCACCTTCTCTTTCTGCTGTAGGCCTGGGTTGCCAACTATGAGAGACCCCGAATGAACGCCAACTCCCTCCTGGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496667.1
CDS-3UTR CAA 90 bp GAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACAGCACTTCCACACCAGCCTCCTaGGCCATCTTCATGATGGCT +
Preference number: 5 (lower is better)
Translates to: ESHCHNLEPCVWRPGNSTSTPAS*AIFMMA
Trigger: AGCCATCATGAAGATGGCCAAGGAGGCTGGTGTGGA...AGTGCTGTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGAAGCCCACTGGCTTCTaGGGCAGCTCCATGCGGCTG +
Preference number: 5 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMKPTGF*GSSMRL
Trigger: CAGCCGCATGGAGCTGCCCAAGAAGCCAGTGGGCTT...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGGGGAACGCTTTCAATTaGGGCAGGTATCGCCTGATG +
Preference number: 5 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRGNAFN*GRYRLM
Trigger: CATCAGGCGATACCTGCCCAAATTGAAAGCGTTCCC...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATGCTTCCAGCTTGCGTTaGGGGGATGCTGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHASSLR*GDAGPL
Trigger: CAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGC...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATTCGGCTGCTTCCAGCTaGCGTTTGGGGGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHSAASS*RLGDAG
Trigger: CCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGA...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGTCGGCTGCTTCCAGCTaGCGTTTGGGGGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: NLRISQEEACQCDGQLQESAASS*RLGDAG
Trigger: CCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGA...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CCAGCAGCAGACAGGCAGGAAAAGGAATCATCCTGCTACCCGAAGGCGCTGCTAACACACACACACACTTaGTGGCTCAAGTGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: PAADRQEKESSCYPKALLTHTHT*WLKCRP
Trigger: TGGCCTGCACTTGAGCCACAAAGTGTGTGTGTGTGT...TAGCAGCGCCTTCGGGTAGCAGGATGATTCCTTTTCCTGCCTGTCTGCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCATTTGCCCTTCCAGGTTaGCTTGACTCTCTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: ISFSAGCTLLLRWLLGHPFALPG*LDSLSG
Trigger: GCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAA...TGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGACCCTTGGGTCAGGATTaGAGGCACTGTTCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGPLGQD*RHCSEG
Trigger: TCCCTCGGAACAGTGCCTCAAATCCTGACCCAAGGG...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp CTTCTGTCTCTCCTCCCTGCCAGACAGCTGGACCAAGTCCTTCAGTaGGGAACCCTGAAGAGAAGGAAAGGTCACAAGACAGGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: LLSLLPARQLDQVLQ*GTLKRRKGHKTGGL
Trigger: CAAACCTCCTGTCTTGTGACCTTTCCTTCTCTTCAGGGTTCCCCACTGAAGGACTTGGTCCAGCTGTCTGGCAGGGAGGAGAGACAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495237.1
CDS-3UTR CAA 90 bp ATACCCCACACCAGTCAGGTATCTGTGTGTACTTCTGTAGGGTGGTGGAAACTTGCCACCCGGGCCCGTTaGCTGAGTTCTTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: IPHTSQVSVCTSVGWWKLATRAR*LSSSPG
Trigger: ACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGC...AAGTTTCCACCACCCTACAGAAGTACACACAGATACCTGACTGGTGTGGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AACAGGAATCAGCCTCATAGCCACACACACACACACGTACCACACACGCACACACAGCTTCTCTGCAGGTaGTACTCTGCTGCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: NRNQPHSHTHTHVPHTHTQLLCR*YSAAAV
Trigger: CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTG...TGTGTGCGTGTGTGGTACGTGTGTGTGTGTGTGGCTATGAGGCTGATTCCTGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGAGGAACCTCCATCGGTaGATCCCGACTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWRNLHR*IPTEEE
Trigger: CTCCTCCTCAGTCGGGATCAACCGATGGAGGTTCCT...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGGAAACCCAGAATCCCATGCTTaGGACAACAGCCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: SAESHCHNLEPCVWRPGNPESHA*DNSQNC
Trigger: GCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGG...GTTTCCCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGCGGGCCACCGTCGTCCTTTaGCATGACATCTTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: LYLCPVISFSAGCTLLLRATVVL*HDIFLN
Trigger: GTTGAGAAAGATGTCATGCAAAAGGACGACGGTGGC...CCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp CTCCATGCGGCTGATGATGGCCTGAAAGCGCTTGTATGTAAGGGGTaGCTTCTGCCCATTCAGCTCAATGATCCTGTCCAGGTCATAGAG +
Preference number: 5 (lower is better)
Translates to: LHAADDGLKALVCKG*LLPIQLNDPVQVIE
Trigger: CTCTATGACCTGGACAGGATCATTGAGCTGAATGGGCAGAAGCCACCCCTTACATACAAGCGCTTTCAGGCCATCATCAGCCGCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000533779.1
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GATTTGCCCTTCCAGGTTTGCTTGACTCTCTTTCTGGCAGTGGCCCGATTCTCTTCCACACCAGCCTCCTaGGCCATCTTCATGATGGCT +
Preference number: 5 (lower is better)
Translates to: DLPFQVCLTLFLAVARFSSTPAS*AIFMMA
Trigger: AGCCATCATGAAGATGGCCAAGGAGGCTGGTGTGGA...AGAGAATCGGGCCACTGCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGAGGGAACGCTTTCAATTaGGGCAGGTATCGCCTGATG +
Preference number: 5 (lower is better)
Translates to: SSATGIADMAVWMLTSPGGNAFN*GRYRLM
Trigger: CATCAGGCGATACCTGCCCAAATTGAAAGCGTTCCC...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAGGGAACGCTTTCAATTaGGGCAGGTATCGCCTGATG +
Preference number: 5 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGGNAFN*GRYRLM
Trigger: CATCAGGCGATACCTGCCCAAATTGAAAGCGTTCCC...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGGACAAGGCAGCTGGCTaGCAGGAACAGGTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: NLRISQEEACQCDGQLQEDKAAG*QEQVSA
Trigger: AGCTGAGACCTGTTCCTGCAAGCCAGCTGCCTTGTC...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGATCTCTACTTGGACTTTaGCCAACTGCCCCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGSLLGL*PTAPGS
Trigger: ACTGCCAGGGGCAGTTGGCAAAAGTCCAAGTAGAGA...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TCGCTCTATCTCTGCCCGGTGATCAGCTTCTCTGCAGGTTGTACTCTGCTGCTGTTCCCACTCTCAGATTaGCCCTTCCAGGTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: SLYLCPVISFSAGCTLLLFPLSD*PFQVCL
Trigger: CAAGCAAACCTGGAAGGGCAAATCTGAGAGTGGGAA...CAGCAGCAGAGTACAACCTGCAGAGAAGCTGATCACCGGGCAGAGATAGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCCAGAAGCCCAAGGATCTGGGCCTCGGCCTTaGGCCTTCCCACTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: GNFLDLSMASCSVPEAQGSGPRP*AFPLSD
Trigger: ATCTGAGAGTGGGAAGGCCAAAGGCCGAGGCCCAGA...TCCTTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATCCCTTGGGTCAGGATTaGAGGCACTGTTCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHPLGQD*RHCSEG
Trigger: TCCCTCGGAACAGTGCCTCAAATCCTGACCCAAGGG...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp TTAAGGAATCTGCCTACGGTCACAGAACAGCCAGCCATGGAGCCATaGAACACTGTGCTTGTCCAGCCGATTTTGAGACGGAACCACCAT +
Preference number: 5 (lower is better)
Translates to: LRNLPTVTEQPAMEP*NTVLVQPILRRNHH
Trigger: ATGGTGGTTCCGTCTCAAAATCGGCTGGACAAGCACAGTGTTCCATGGCTCCATGGCTGGCTGTTCTGTGACCGTAGGCAGATTCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496667.1
CDS-3UTR CAA 90 bp CTTCTCTGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTCAGTTTCCTTAAACTaGTGTCCAAATCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LLCRLYSAAAVAAWAPRLSVSLN*CPNLPE
Trigger: CTCTGGAAGATTTGGACACAAGTTTAAGGAAACTGA...AAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGCAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTGCTCATCAGTTTCCTTAAACTaGTGTCCAAATCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: CRLYSAAAVAAWAPRLCSSVSLN*CPNLPE
Trigger: CTCTGGAAGATTTGGACACAAGTTTAAGGAAACTGA...TGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TACAGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGTCCACACCAGCCTCCTaGGCCATCTTCATGATGGCT +
Preference number: 5 (lower is better)
Translates to: YRYSPSPGNIQNHECQQMSTPAS*AIFMMA
Trigger: AGCCATCATGAAGATGGCCAAGGAGGCTGGTGTGGA...CATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GGAAACTTTTTAGATCTGTCTATGGCCTCATGCTCAGTCCCAGAAGCCCAAGGACAGCTTCTCTGCAGGTaGTACTCTGCTGCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: GNFLDLSMASCSVPEAQGQLLCR*YSAAAV
Trigger: CACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTG...TCCTTGGGCTTCTGGGACTGAGCATGAGGCCATAGACAGATCTAAAAAGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGCCAGAATCCCATGCTTaGGACAACAGCCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWPESHA*DNSQNC
Trigger: GCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGG...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGCTCAGCTACTGGGATAGCTGACATGGCAGTCTGGATGCTGACAAGTCCAGGAGGGTGTAATCTCTACTaGGACTTTTGCCAACTGCCC +
Preference number: 5 (lower is better)
Translates to: SSATGIADMAVWMLTSPGGCNLY*DFCQLP
Trigger: GGGCAGTTGGCAAAAGTCCAAGTAGAGATTACACCC...TCCTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCAGTAGCTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCCCACCTACTGCTCCTGGAGGGTGTAATCTCTACTaGGACTTTTGCCAACTGCCC +
Preference number: 5 (lower is better)
Translates to: WNARIGFSGSNLPPTAPGGCNLY*DFCQLP
Trigger: GGGCAGTTGGCAAAAGTCCAAGTAGAGATTACACCC...TCCAGGAGCAGTAGGTGGGAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp TTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCCCTGGAATGCAAGGATaGGCTTCTCTGGGTCAAACC +
Preference number: 5 (lower is better)
Translates to: LQEQVSAESHCHNLEPCVPGMQG*ASLGQT
Trigger: GGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGG...GACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGGCCACCGTCGTCCTTTaGCATGACATCTTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: ILPATISSPCWPLGQDLRATVVL*HDIFLN
Trigger: GTTGAGAAAGATGTCATGCAAAAGGACGACGGTGGC...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGCCTTGTGTCTGGAGGCCGGACATACGTACAACAGTaGGACTCTAAAGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RSQLKVTAITSSLVSGGRTYVQQ*DSKGSS
Trigger: AGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGT...CCGGCCTCCAGACACAAGGCTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GGAGGCACAGGCCACTCCTGGAATGCAAGGATTGGCTTCTCTGGGTCAAACCTCACATACGTACAACAGTaGGACTCTAAAGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GGTGHSWNARIGFSGSNLTYVQQ*DSKGSS
Trigger: AGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGT...GAGGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGGAGTGGCCTGTGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp ATTTTGCCTGCAACCATCTCTTCCCCATGCTGGCCCTTGGGTCAGGATTTGAGGTTCCCACTCTCAGATTaGCCCTTCCAGGTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: ILPATISSPCWPLGQDLRFPLSD*PFQVCL
Trigger: CAAGCAAACCTGGAAGGGCAAATCTGAGAGTGGGAA...CCTCAAATCCTGACCCAAGGGCCAGCATGGGGAAGAGATGGTTGCAGGCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CGATTCTCTTTCCTCTCGACTGGGGCTGAGGGAACAGGGAAGCCCCCAACCCAATCAGTTTCCTTAAACTaGTGTCCAAATCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: RFSFLSTGAEGTGKPPTQSVSLN*CPNLPE
Trigger: CTCTGGAAGATTTGGACACAAGTTTAAGGAAACTGA...TTGGGTTGGGGGCTTCCCTGTTCCCTCAGCCCCAGTCGAGAGGAAAGAGAATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATCCAGAATCCCATGCTTaGGACAACAGCCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHPESHA*DNSQNC
Trigger: GCAGTTCTGGCTGTTGTCCAAAGCATGGGATTCTGG...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AACCTGAGGATATCTCAGGAAGAAGCCTGTCAGTGTGATGGACAGCTACAGGAGTCTCTACTTGGACTTTaGCCAACTGCCCCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: NLRISQEEACQCDGQLQESLLGL*PTAPGS
Trigger: ACTGCCAGGGGCAGTTGGCAAAAGTCCAAGTAGAGA...CTCCTGTAGCTGTCCATCACACTGACAGGCTTCTTCCTGAGATATCCTCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CCTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGCCACCGTCGTCCTTTaGCATGACATCTTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: PPTYCSWKEWCSGCNLYLATVVL*HDIFLN
Trigger: GTTGAGAAAGATGTCATGCAAAAGGACGACGGTGGC...CAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATACACACACACACACTTaGTGGCTCAAGTGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHTHTHT*WLKCRP
Trigger: TGGCCTGCACTTGAGCCACAAAGTGTGTGTGTGTGT...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTCCCACCTACTGCTCCTGGAAGGAATGGTGTTCTGGGTGTAATCTCTACTTGGTTTGCCCTTCCAGGTTaGCTTGACTCTCTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: LPPTAPGRNGVLGVISTWFALPG*LDSLSG
Trigger: GCCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAA...CCAAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCAGTAGGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp CTAGTGAAGGTGACATACGTACAACAGTTGGACTCTAAAGGCAGCTCTCTGGCTCCTGGAATGCAAGGATaGGCTTCTCTGGGTCAAACC +
Preference number: 5 (lower is better)
Translates to: LVKVTYVQQLDSKGSSLAPGMQG*ASLGQT
Trigger: GGTTTGACCCAGAGAAGCCAATCCTTGCATTCCAGG...AGCCAGAGAGCTGCCTTTAGAGTCCAACTGTTGTACGTATGTCACCTTCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp AGGTACTCCCCCAGCCCAGGCAACATTCAGAATCATGAGTGTCAACAGATGCATTTCCCACTCTCAGATTaGCCCTTCCAGGTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: RYSPSPGNIQNHECQQMHFPLSD*PFQVCL
Trigger: CAAGCAAACCTGGAAGGGCAAATCTGAGAGTGGGAA...ATGCATCTGTTGACACTCATGATTCTGAATGTTGCCTGGGCTGGGGGAGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS-3UTR CAA 90 bp GCAGCTGGCTTGCAGGAACAGGTCTCAGCTGAAAGTCACTGCCATAACCTCGAGTCAGTTTCCTTAAACTaGTGTCCAAATCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: AAGLQEQVSAESHCHNLESVSLN*CPNLPE
Trigger: CTCTGGAAGATTTGGACACAAGTTTAAGGAAACTGA...CTCGAGGTTATGGCAGTGACTTTCAGCTGAGACCTGTTCCTGCAAGCCAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS CCA 90 bp CTTTCAACAGAAGCAATACTAGCTATCTTGTTACTGAGAAGCCCATaGACACCAGCACCAGGCAGTGCCTGTATTGTCTGCGAGAGGTTA +
Preference number: 5 (lower is better)
Translates to: LSTEAILAILLLRSP*TPAPGSACIVCERL
Trigger: TAACCTCTCGCAGACAATACAGGCACTGCCTGGTGCTGGTGTCCATGGGCTTCTCAGTAACAAGATAGCTAGTATTGCTTCTGTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495237.1
CDS GCA 72 bp CTTTGCGGAACCAGTGCACCGAAGAGGCGCTGTCCGTaGCGGGCGCTGGCGCCGGGGCCACAGCTGCCGCCG +
Preference number: 6 (lower is better)
Translates to: LCGTSAPKRRCP*RALAPGPQLPP
Trigger: CGGCGGCAGCTGTGGCCCCGGCGCCAGCGCCCGGCACGGACAGCGCCTCTTCGGTGCACTGGTTCCGCAAAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000443527.6
ENST00000473199.5
ENST00000496571.5
ENST00000532390.5
ENST00000616080.2
ENST00000616623.4
CDS GCA 72 bp CGCCGTCGCCACAGTCGCCGCCATGACTGTCCAGACTaGTCCAGCCACCCCCGCTCCGCCCCGGTAGGCGAC +
Preference number: 6 (lower is better)
Translates to: RRRHSRRHDCPD*SSHPRSAPVGD
Trigger: GTCGCCTACCGGGGCGGAGCGGGGGTGGCTGGAGCAGTCTGGACAGTCATGGCGGCGACTGTGGCGACGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443527.6
ENST00000616623.4
CDS TCA 72 bp GTGGGTCCGCCCGGGTGGAGCTGGCATGCGGACAAGTaGCGCAGGCTGGGGCTGTCCGCAGGCTGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: VGPPGWSWHADK*RRLGLSAGWGC
Trigger: ACAGCCCCAGCCTGCGGACAGCCCCAGCCTGCGTCACTTGTCCGCATGCCAGCTCCACCCGGGCGGACCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417225.6
CDS GCA 72 bp CACTGGGTAGTGGTCTTGGGCCTGCACTGCTCATGCTaGCAGCCTGGCTCGAGCTGGGCTCTGCCACAGGGT +
Preference number: 6 (lower is better)
Translates to: HWVVVLGLHCSC*QPGSSWALPQG
Trigger: ACCCTGTGGCAGAGCCCAGCTCGAGCCAGGCTGGCAGCATGAGCAGTGCAGGCCCAAGACCACTACCCAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CCA 72 bp GGCTCTGCAGTCTCAGGCATCCTTGCTCGGCAGCTCTaGGGTTGGCAACTCTGCCACCCGGGCCCGTTTGCT +
Preference number: 6 (lower is better)
Translates to: GSAVSGILARQL*GWQLCHPGPFA
Trigger: AGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGAGCAAGGATGCCTGAGACTGCAGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS GCA 72 bp GGCATCCTTGCTCGGCAGCTCTGGGGTTGGCAACTCTaGCACCCGGGCCCGTTTGCTGAGTTCTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: GILARQLWGWQL*HPGPFAEFFTR
Trigger: CCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGAGCAAGGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS GCA 72 bp TCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTTaGTCACGGAGCAAGGGCTCTGCAGTCTCAGGCATC +
Preference number: 6 (lower is better)
Translates to: SAAAVAAWAPRL*SRSKGSAVSGI
Trigger: GATGCCTGAGACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CCA 72 bp CCTGGATCTCGGCCCTGCAGCTCTCCATCTGCTGGCTaGTCACCAAGCCCACTGGCTTCTTGGGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: PGSRPCSSPSAG*SPSPLASWAAP
Trigger: TGGAGCTGCCCAAGAAGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGAGCTGCAGGGCCGAGATCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000533779.1
ENST00000616080.2
ENST00000616623.4
CDS CCA 72 bp CACCAGGTGGTTCCTCGGCTGCTTCCAGCTTGCGTTTaGGGGATGCTGGGCCACTGGGTAGTGGTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: HQVVPRLLPACV*GMLGHWVVVLG
Trigger: GCCCAAGACCACTACCCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CAA 72 bp CTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTaGCTCACGGAGCAAGGGCTCTGCAGTCTCAGGCAT +
Preference number: 6 (lower is better)
Translates to: LCCCGGCLGTQA*LTEQGLCSLRH
Trigger: ATGCCTGAGACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CAA 90 bp TTGCTCGGCAGCTCTGGGGTTGGCAACTCTGCCACCCGGGCCCGTTaGCTGAGTTCTTCACCAGGTGGTTCCTCGGCTGCTTCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: LLGSSGVGNSATRAR*LSSSPGGSSAASSL
Trigger: CAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAGAGCTGCCGAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CAA 90 bp CAGGTTGTACTCTGCTGCTGCGGTGGCTGCTTGGGCACCCAGGCTTaGCTCACGGAGCAAGGGCTCTGCAGTCTCAGGCATCCTTGCTCG +
Preference number: 6 (lower is better)
Translates to: QVVLCCCGGCLGTQA*LTEQGLCSLRHPCS
Trigger: CGAGCAAGGATGCCTGAGACTGCAGAGCCCTTGCTCCGTGAGCAAAGCCTGGGTGCCCAAGCAGCCACCGCAGCAGCAGAGTACAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS TCA 72 bp CTGGGGTTGGCAACTCTGCCACCCGGGCCCGTTTGCTaGGTTCTTCACCAGGTGGTTCCTCGGCTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: LGLATLPPGPVC*VLHQVVPRLLP
Trigger: TGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS GCA 72 bp TGGTTCTCCTGGATCTCGGCCCTGCAGCTCTCCATCTaGTGGCTGGTCACCAAGCCCACTGGCTTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: WFSWISALQLSI*WLVTKPTGFLG
Trigger: GCCCAAGAAGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGAGCTGCAGGGCCGAGATCCAGGAGAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000533779.1
ENST00000616080.2
ENST00000616623.4
CDS CCA 72 bp TTCTCCTGGATCTCGGCCCTGCAGCTCTCCATCTGCTaGCTGGTCACCAAGCCCACTGGCTTCTTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: FSWISALQLSIC*LVTKPTGFLGS
Trigger: GCTGCCCAAGAAGCCAGTGGGCTTGGTGACCAGCCAGCAGATGGAGAGCTGCAGGGCCGAGATCCAGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000533779.1
ENST00000616080.2
ENST00000616623.4
CDS CCA 72 bp TGCCACCCGGGCCCGTTTGCTGAGTTCTTCACCAGGTaGTTCCTCGGCTGCTTCCAGCTTGCGTTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: CHPGPFAEFFTR*FLGCFQLAFGG
Trigger: TCCCCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CAA 72 bp AGCTCTGGGGTTGGCAACTCTGCCACCCGGGCCCGTTaGCTGAGTTCTTCACCAGGTGGTTCCTCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: SSGVGNSATRAR*LSSSPGGSSAA
Trigger: AGCAGCCGAGGAACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGGTGGCAGAGTTGCCAACCCCAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CAA 90 bp CTGAGTTCTTCACCAGGTGGTTCCTCGGCTGCTTCCAGCTTGCGTTaGGGGGATGCTGGGCCACTGGGTAGTGGTCTTGGGCCTGCACTG +
Preference number: 6 (lower is better)
Translates to: LSSSPGGSSAASSLR*GDAGPLGSGLGPAL
Trigger: CAGTGCAGGCCCAAGACCACTACCCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS GCA 72 bp GTTCTTCACCAGGTGGTTCCTCGGCTGCTTCCAGCTTaGGTTTGGGGGATGCTGGGCCACTGGGTAGTGGTC +
Preference number: 6 (lower is better)
Translates to: VLHQVVPRLLPA*VWGMLGHWVVV
Trigger: GACCACTACCCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CAA 90 bp CGTTTGCTGAGTTCTTCACCAGGTGGTTCCTCGGCTGCTTCCAGCTaGCGTTTGGGGGATGCTGGGCCACTGGGTAGTGGTCTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: RLLSSSPGGSSAASS*RLGDAGPLGSGLGP
Trigger: AGGCCCAAGACCACTACCCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCAGCAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS TCA 72 bp TCTCACTGTCTTCTCTGGGGCTCTGCACGCTTACCTTaGACAGCCTTGGGAACACGTCGGCTGGCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: SHCLLWGSARLP*TALGTRRLAVP
Trigger: GGGGACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGTAAGCGTGCAGAGCCCCAGAGAAGACAGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS GCA 72 bp CCGTTTGCTGAGTTCTTCACCAGGTGGTTCCTCGGCTaGTTCCAGCTTGCGTTTGGGGGATGCTGGGCCACT +
Preference number: 6 (lower is better)
Translates to: PFAEFFTRWFLG*FQLAFGGCWAT
Trigger: AGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCAGCAAACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CCA 72 bp TCCCCATTCCTTGAACAGCCTTGGGAACACGTCGGCTaGCTGTCCCCGGACTACAAACAGGCGGGAGTTCAG +
Preference number: 6 (lower is better)
Translates to: SPFLEQPWEHVG*LSPDYKQAGVQ
Trigger: CTGAACTCCCGCCTGTTTGTAGTCCGGGGACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGAATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000473199.5
ENST00000532390.5
ENST00000616080.2
ENST00000616623.4
CDS CCA 72 bp AAGCCGGCTGGTCTCGGCATGGTTGACGATGGGCCGTaGGTAGTCCACACCAATGATGCACTTGGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: KPAGLGMVDDGP*VVHTNDALGCL
Trigger: AAGGCAGCCAAGTGCATCATTGGTGTGGACTACCCACGGCCCATCGTCAACCATGCCGAGACCAGCCGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000616080.2
ENST00000616623.4
CDS CCA 72 bp CACGCTTACCTTGAACAGCCTTGGGAACACGTCGGCTaGCTGTCCCCGGACTACAAACAGGCGGGAGTTCAG +
Preference number: 6 (lower is better)
Translates to: HAYLEQPWEHVG*LSPDYKQAGVQ
Trigger: CTGAACTCCCGCCTGTTTGTAGTCCGGGGACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGTAAGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS CAA 72 bp AGTTCTTCACCAGGTGGTTCCTCGGCTGCTTCCAGCTaGCGTTTGGGGGATGCTGGGCCACTGGGTAGTGGT +
Preference number: 6 (lower is better)
Translates to: SSSPGGSSAASS*RLGDAGPLGSG
Trigger: ACCACTACCCAGTGGCCCAGCATCCCCCAAACGCAAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000488962.1
ENST00000616080.2
ENST00000616623.4
CDS CAA 90 bp AGGGACAGAATCTCACTGTCTTCTCTGGGGCTCTGCACGCTTACCTaGAACAGCCTTGGGAACACGTCGGCTGGCTGTCCCCGGACTACA +
Preference number: 6 (lower is better)
Translates to: RDRISLSSLGLCTLT*NSLGNTSAGCPRTT
Trigger: TGTAGTCCGGGGACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGTAAGCGTGCAGAGCCCCAGAGAAGACAGTGAGATTCTGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS TCA 72 bp GGCTTCTTGGGCAGCTCCATGCGGCTGATGATGGCCTaGAAGCGCTTGTATGTAAGGGGTGGCTTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: GFLGSSMRLMMA*KRLYVRGGFCP
Trigger: TGGGCAGAAGCCACCCCTTACATACAAGCGCTTTCAGGCCATCATCAGCCGCATGGAGCTGCCCAAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000533779.1
ENST00000616080.2
ENST00000616623.4
CDS GCA 72 bp CACTCCCCATTCAGGTGGGACAGGACCACAGCCTTCTaGCTGCTCAGCAAGCTTTTCCCAGAGCTCCTCACA +
Preference number: 6 (lower is better)
Translates to: HSPFRWDRTTAF*LLSKLFPELLT
Trigger: TGTGAGGAGCTCTGGGAAAAGCTTGCTGAGCAGGCAGAAGGCTGTGGTCCTGTCCCACCTGAATGGGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533779.1
CDS CCA 72 bp TTCTCTGGGGCTCTGCACGCTTACCTTGAACAGCCTTaGGAACACGTCGGCTGGCTGTCCCCGGACTACAAA +
Preference number: 6 (lower is better)
Translates to: FSGALHAYLEQP*EHVGWLSPDYK
Trigger: TTTGTAGTCCGGGGACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGTAAGCGTGCAGAGCCCCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS CAA 72 bp ATCTCACTGTCTTCTCTGGGGCTCTGCACGCTTACCTaGAACAGCCTTGGGAACACGTCGGCTGGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: ISLSSLGLCTLT*NSLGNTSAGCP
Trigger: GGGACAGCCAGCCGACGTGTTCCCAAGGCTGTTCAAGGTAAGCGTGCAGAGCCCCAGAGAAGACAGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS CCA 72 bp CTGCCTACGGTCACAGAACAGCCAGCCATGGAGCCATaGAACACTGTGCTTGTCCAGCCGATTTTGAGACGG +
Preference number: 6 (lower is better)
Translates to: LPTVTEQPAMEP*NTVLVQPILRR
Trigger: CCGTCTCAAAATCGGCTGGACAAGCACAGTGTTCCATGGCTCCATGGCTGGCTGTTCTGTGACCGTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496667.1
CDS CCA 72 bp GGAGGGAGTTGGCGTTCATTCGGGGTCTCTCATAGTTaGCAACCCAGGCCTACAGCAGAAAGAGAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: GGSWRSFGVSHS*QPRPTAEREGG
Trigger: GCCACCTTCTCTTTCTGCTGTAGGCCTGGGTTGCCAACTATGAGAGACCCCGAATGAACGCCAACTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496667.1
CDS GCA 72 bp GTCAGGGACAGAATCTCACTGTCTTCTCTGGGGCTCTaGACGCTTACCTTGAACAGCCTTGGGAACACGTCG +
Preference number: 6 (lower is better)
Translates to: VRDRISLSSLGL*TLTLNSLGNTS
Trigger: CGACGTGTTCCCAAGGCTGTTCAAGGTAAGCGTGCAGAGCCCCAGAGAAGACAGTGAGATTCTGTCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS CCA 72 bp GCTGATGATGGCCTGAAAGCGCTTGTATGTAAGGGGTaGCTTCTGCCCATTCAGCTCAATGATCCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: ADDGLKALVCKG*LLPIQLNDPVQ
Trigger: CTGGACAGGATCATTGAGCTGAATGGGCAGAAGCCACCCCTTACATACAAGCGCTTTCAGGCCATCATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000533779.1
ENST00000616080.2
ENST00000616623.4
CDS CAA 90 bp TCCTTAACACAGTTTCCATTCCAAGAGCAAGCTAACTGGCTGCCTTaGCTCCCAACTTCTCTAGCAGCAACAGCCAGACCAGCCCTGATG +
Preference number: 6 (lower is better)
Translates to: SLTQFPFQEQANWLP*LPTSLAATARPALM
Trigger: CATCAGGGCTGGTCTGGCTGTTGCTGCTAGAGAAGTTGGGAGCAAAGGCAGCCAGTTAGCTTGCTCTTGGAATGGAAACTGTGTTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS TCA 72 bp TGGAGCCATGGAACACTGTGCTTGTCCAGCCGATTTTaGGACGGAACCACCATCAGACCAAACAACGAGTCT +
Preference number: 6 (lower is better)
Translates to: WSHGTLCLSSRF*DGTTIRPNNES
Trigger: AGACTCGTTGTTTGGTCTGATGGTGGTTCCGTCTCAAAATCGGCTGGACAAGCACAGTGTTCCATGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496667.1
CDS CAA 72 bp CAGTTTCCATTCCAAGAGCAAGCTAACTGGCTGCCTTaGCTCCCAACTTCTCTAGCAGCAACAGCCAGACCA +
Preference number: 6 (lower is better)
Translates to: QFPFQEQANWLP*LPTSLAATARP
Trigger: TGGTCTGGCTGTTGCTGCTAGAGAAGTTGGGAGCAAAGGCAGCCAGTTAGCTTGCTCTTGGAATGGAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS CAA 72 bp ATGGAGCCATGGAACACTGTGCTTGTCCAGCCGATTTaGAGACGGAACCACCATCAGACCAAACAACGAGTC +
Preference number: 6 (lower is better)
Translates to: MEPWNTVLVQPI*RRNHHQTKQRV
Trigger: GACTCGTTGTTTGGTCTGATGGTGGTTCCGTCTCAAAATCGGCTGGACAAGCACAGTGTTCCATGGCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496667.1
CDS CAA 90 bp GCTGTCCCCGGACTACAAACAGGCGGGAGTTCAGTTTCCTTAAACTaGTGTCCAAATCTTCCAGAGACTGAAGTAGGAACCATGTGTGGG +
Preference number: 6 (lower is better)
Translates to: AVPGLQTGGSSVSLN*CPNLPETEVGTMCG
Trigger: CCCACACATGGTTCCTACTTCAGTCTCTGGAAGATTTGGACACAAGTTTAAGGAAACTGAACTCCCGCCTGTTTGTAGTCCGGGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417225.6
CDS CAA 90 bp GCTGTCCCCGGACTACAAACAGGCGGGAGTTCAGTTTCCTTAAACTaGTGTCCAAATCTTCCAGAGACTGAAGTAGGAACCTCCATCGGT +
Preference number: 6 (lower is better)
Translates to: AVPGLQTGGSSVSLN*CPNLPETEVGTSIG
Trigger: ACCGATGGAGGTTCCTACTTCAGTCTCTGGAAGATTTGGACACAAGTTTAAGGAAACTGAACTCCCGCCTGTTTGTAGTCCGGGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000443527.6
ENST00000473199.5
ENST00000496571.5
ENST00000532390.5
ENST00000616080.2
ENST00000616623.4
CDS CAA 90 bp AGGCTGACAGATTCCCTGCTTTCAACAGAAGCAATACTAGCTATCTaGTTACTGAGAAGCCCATGGACACCAGCACCAGGCAGTGCCTGT +
Preference number: 6 (lower is better)
Translates to: RLTDSLLSTEAILAI*LLRSPWTPAPGSAC
Trigger: ACAGGCACTGCCTGGTGCTGGTGTCCATGGGCTTCTCAGTAACAAGATAGCTAGTATTGCTTCTGTTGAAAGCAGGGAATCTGTCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495237.1
CDS CCA 72 bp CATTCCCTCAGTCGGAATATCATATCACTCAGGCTGTaGGGAAACCGTCAGGGACAGAATCTCACTGTCTTC +
Preference number: 6 (lower is better)
Translates to: HSLSRNIISLRL*GNRQGQNLTVF
Trigger: GAAGACAGTGAGATTCTGTCCCTGACGGTTTCCCCACAGCCTGAGTGATATGATATTCCGACTGAGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496571.5
CDS CCA 72 bp GAAGCAATACTAGCTATCTTGTTACTGAGAAGCCCATaGACACCAGCACCAGGCAGTGCCTGTATTGTCTGC +
Preference number: 6 (lower is better)
Translates to: EAILAILLLRSP*TPAPGSACIVC
Trigger: GCAGACAATACAGGCACTGCCTGGTGCTGGTGTCCATGGGCTTCTCAGTAACAAGATAGCTAGTATTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495237.1
CDS CAA 72 bp GATTCCCTGCTTTCAACAGAAGCAATACTAGCTATCTaGTTACTGAGAAGCCCATGGACACCAGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: DSLLSTEAILAI*LLRSPWTPAPG
Trigger: GCCTGGTGCTGGTGTCCATGGGCTTCTCAGTAACAAGATAGCTAGTATTGCTTCTGTTGAAAGCAGGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495237.1
CDS CAA 90 bp AGGTTTGACCATTTCAGTGATAGCCCGGCACGGCTGTTCTGTTATTaGAACTTTATGAGAATTGAACCACAGTGTCTCGGTGCTACTGGG +
Preference number: 6 (lower is better)
Translates to: RFDHFSDSPARLFCY*NFMRIEPQCLGATG
Trigger: CCCAGTAGCACCGAGACACTGTGGTTCAATTCTCATAAAGTTCAAATAACAGAACAGCCGTGCCGGGCTATCACTGAAATGGTCAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495237.1
CDS CAA 72 bp GGACTACAAACAGGCGGGAGTTCAGTTTCCTTAAACTaGTGTCCAAATCTTCCAGAGACTGAAGTAGGAACC +
Preference number: 6 (lower is better)
Translates to: GLQTGGSSVSLN*CPNLPETEVGT
Trigger: GGTTCCTACTTCAGTCTCTGGAAGATTTGGACACAAGTTTAAGGAAACTGAACTCCCGCCTGTTTGTAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417225.6
ENST00000443527.6
ENST00000473199.5
ENST00000496571.5
ENST00000532390.5
ENST00000616080.2
ENST00000616623.4
CDS CAA 72 bp CATTTCAGTGATAGCCCGGCACGGCTGTTCTGTTATTaGAACTTTATGAGAATTGAACCACAGTGTCTCGGT +
Preference number: 6 (lower is better)
Translates to: HFSDSPARLFCY*NFMRIEPQCLG
Trigger: ACCGAGACACTGTGGTTCAATTCTCATAAAGTTCAAATAACAGAACAGCCGTGCCGGGCTATCACTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495237.1