Pregenerated sensors for CRY1 (Homo sapiens)
Ensembl gene IDs: ENSG00000008405Ensembl transcript IDs: ENST00000008527.10, ENST00000549356.1, ENST00000550633.1, ENST00000552790.5
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCCCACCAATTTCAGCTaGAACAGTATTCCTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHPTNFS*NSIPPE Trigger: TTCAGGAGGAATACTGTTGCAGCTGAAATTGGTGGG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAACGGTTGCCGGCCGGTaGCCGGTCCCGAGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTTVAGR*PVPRLP Trigger: GGGCAGCCTCGGGACCGGTCACCGGCCGGCAACCGT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATGCCTCACCCGGGGCGTaGGGAAAGGGCGGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHASPGA*GKGGRG Trigger: CCCTCTGCCGCCCTTTCCTCACGCCCCGGGTGAGGC...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATAGGCCGCTGGACGGTTaGCGGCCGGTGACCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHRPLDG*RPVTGP Trigger: GGGACCGGTCACCGGCCGGCAACCGTCCAGCGGCCT...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAACGGCCCGCCCGAGGTaGGTCACCGAGGAGAACCGG | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTTARPR*VTEENR Trigger: CCGGTTCTCCTCGGTGACTCACCTCGGGCGGGCCGT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCGGACCTCCGGAGCCTaGGCAAGTTCCAGGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHRTSGA*ASSRSS Trigger: CGAGCTCCTGGAACTTGCTCAGGCTCCGGAGGTCCG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCCCGCCGCAACCGCCTaGAGGCGACGCATAACTTCG | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHPAATA*RRRITS Trigger: CGAAGTTATGCGTCGCCTCCAGGCGGTTGCGGCGGG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAAGGGCGGGGTTGTCGTaGAGCCGGAGCCCCTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTRAGLS*SRSPFR Trigger: CCGAAAGGGGCTCCGGCTCCACGACAACCCCGCCCT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAAGAACCGGAGGGGAATaGGCCCCTGTCGGCGACGCT | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTRTGGE*APVGDA Trigger: AGCGTCGCCGACAGGGGCTCATTCCCCTCCGGTTCT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATTGTCGGCGCCCTGAATaGACTCCTTCAGGGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHCRRPE*TPSGRG Trigger: ACCCCGCCCTGAAGGAGTGCATTCAGGGCGCCGACA...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAATGGTGTCGGCGCCCTaGATGCACTCCTTCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTMVSAP*MHSFRA Trigger: CGCCCTGAAGGAGTGCATTCAGGGCGCCGACACCAT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | AATATAAAACTGGTGCAACAATTTCTCCAGTACAGATGCATGTCTCTTGACCAAGACGTTTCCCACCACTaGGACCAGTGCCCATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NIKLVQQFLQYRCMSLDQDVSHH*DQCPWS Trigger: GCTCCATGGGCACTGGTCTCAGTGGTGGGAAACGTC...TTGGTCAAGAGACATGCATCTGTACTGGAGAAATTGTTGCACCAGTTTTATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549356.1 |
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| CDS-3UTR GCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCGCTTCCAAGAGAATTaGCTCACCCGGGGCGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHRFQEN*LTRGVR Trigger: CCTCACGCCCCGGGTGAGGCAATTCTCTTGGAAGCG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATTGTAGACGCAGCGGATaGTGTCGGCGCCCTGAATGC | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHCRRSG*CRRPEC Trigger: GCATTCAGGGCGCCGACACCATCCGCTGCGTCTACA...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAGACGTTTCCCACCACTaGGACCAGTGCCCATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTDVSHH*DQCPWS Trigger: GCTCCATGGGCACTGGTCTCAGTGGTGGGAAACGTC...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACACCCTTTCGGAACCAGTaGACGGCGTTCACCCCCATG | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTPFRNQ*TAFTPM Trigger: CATGGGGGTGAACGCCGTGCACTGGTTCCGAAAGGG...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATGCGCCGGAGGCGCAGTaGAAAGATGAATGGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHAPEAQ*KDEWRL Trigger: CAACCTCCATTCATCTTTCCACTGCGCCTCCGGCGC...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATAAGATGAATGGAGGTTaGCTAGTCGGCGGAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHKMNGG*LVGGVR Trigger: CCGGACTCCGCCGACTAGGCAACCTCCATTCATCTT...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATAAAATCGCCACCTGTTaGTGCCCACATTGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHKIATC*CPHWRS Trigger: GCTCCTCCAATGTGGGCATCAACAGGTGGCGATTTT...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | AATATAAAACTGGTGCAACAATTTCTCCAGTACAGATGCATGTCTCTTGACCAATGTGTGTCCTCTTCCTaGCTAGGACGTTTCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: NIKLVQQFLQYRCMSLDQCVSSS*LGRFPP Trigger: TGGTGGGAAACGTCCTAGTCAGGAAGAGGACACACA...TTGGTCAAGAGACATGCATCTGTACTGGAGAAATTGTTGCACCAGTTTTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549356.1 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACATGTGTGTCCTCTTCCTaGCTAGGACGTTTCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTCVSSS*LGRFPP Trigger: TGGTGGGAAACGTCCTAGTCAGGAAGAGGACACACA...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCCTGGGAAACACATCTaGTGGTTGTCCACGAATCAC | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHPGKHI*WLSTNH Trigger: GTGATTCGTGGACAACCAGCAGATGTGTTTCCCAGG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACACAGTGGAAAGATGAATaGAGGTTGCCTAGTCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTQWKDE*RLPSRR Trigger: CCGCCGACTAGGCAACCTCCATTCATCTTTCCACTG...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATGGCCTTCCGCCCATTTaGCTAAAGCCTCAGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHGLPPI*LKPQDF Trigger: AAAATCCTGAGGCTTTAGCCAAATGGGCGGAAGGCC...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATAGATCCTCAAGACACTaGAGCAAAAATCGCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHRSSRH*SKNRHL Trigger: CAGGTGGCGATTTTTGCTTCAGTGTCTTGAGGATCT...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | AATATAAAACTGGTGCAACAATTTCTCCAGTACAGATGCATGTCTCTTGACCAAAAAATACCACTCCCTTaGGAGCAACTTCCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NIKLVQQFLQYRCMSLDQKIPLP*EQLPLL Trigger: CAGCAGTGGAAGTTGCTCTCAAGGGAGTGGTATTTT...TTGGTCAAGAGACATGCATCTGTACTGGAGAAATTGTTGCACCAGTTTTATATT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000549356.1 |
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| CDS-3UTR GCA 90 bp | AATATAAAACTGGTGCAACAATTTCTCCAGTACAGATGCATGTCTCTTGACCAAGAGAGCAACTTCCACTaGTGCTACAACCTGGGATAT | + |
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Preference number: 4 (lower is better) Translates to: NIKLVQQFLQYRCMSLDQESNFH*CYNLGY Trigger: ATATCCCAGGTTGTAGCAGCAGTGGAAGTTGCTCTC...TTGGTCAAGAGACATGCATCTGTACTGGAGAAATTGTTGCACCAGTTTTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549356.1 |
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| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACACGGCTTGCCTCAGCATaGTTCACCATTGGTTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTRLASA*FTIGLG Trigger: TCCTAAACCAATGGTGAACCATGCTGAGGCAAGCCG...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAGACGAAGCTGTGTCATaGTGGCATCAATCCATGGAA | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTDEAVS*WHQSME Trigger: TTCCATGGATTGATGCCATCATGACACAGCTTCGTC...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCAGGCAAATAACGCCTaGTATAGTCTCCATTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHQANNA*YSLHWD Trigger: ATCCCAATGGAGACTATATCAGGCGTTATTTGCCTG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAAAAATACCACTCCCTTaGGAGCAACTTCCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTKIPLP*EQLPLL Trigger: CAGCAGTGGAAGTTGCTCTCAAGGGAGTGGTATTTT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATGATATTCAAACGGCTTaGCTCAGCATGGTTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHDIQTA*LSMVHH Trigger: ATGGTGAACCATGCTGAGGCAAGCCGTTTGAATATC...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAGAGAGCAACTTCCACTaGTGCTACAACCTGGGATAT | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTESNFH*CYNLGY Trigger: ATATCCCAGGTTGTAGCAGCAGTGGAAGTTGCTCTC...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATAAGCAACTGCATGCCTaGCTAGATGATGAATCCAAC | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHKQLHA*LDDESN Trigger: GTTGGATTCATCATCTAGCCAGGCATGCAGTTGCTT...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACATTCCAAACGAGTAAGTaGTTCAGTTTCTCCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTFQTSK*FSFSTW Trigger: CCAGGTGGAGAAACTGAAGCACTTACTCGTTTGGAA...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATTTGGATACCTTCTGGTaGATTCCAGGGATCATAGAT | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHLDTFW*IPGIID Trigger: ATCTATGATCCCTGGAATGCACCAGAAGGTATCCAA...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | AATATAAAACTGGTGCAACAATTTCTCCAGTACAGATGCATGTCTCTTGACCAAAGCAACTTCCACTGCTaGTACAACCTGGGATATTTT | + |
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Preference number: 4 (lower is better) Translates to: NIKLVQQFLQYRCMSLDQSNFHC*YNLGYF Trigger: AAAATATCCCAGGTTGTAGCAGCAGTGGAAGTTGCT...TTGGTCAAGAGACATGCATCTGTACTGGAGAAATTGTTGCACCAGTTTTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549356.1 |
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| CDS-3UTR GCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACACCCACCAATTTCAGCTaGAACAGTATTCCTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTPTNFS*NSIPPE Trigger: TTCAGGAGGAATACTGTTGCAGCTGAAATTGGTGGG...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAGGGAAACACATCTGCTaGTTGTCCACGAATCACAAA | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTGKHIC*LSTNHK Trigger: TTTGTGATTCGTGGACAACCAGCAGATGTGTTTCCC...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCTTTTGGATACCTTCTaGTGCATTCCAGGGATCATA | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHLLDTF*CIPGII Trigger: TATGATCCCTGGAATGCACCAGAAGGTATCCAAAAG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | AATATAAAACTGGTGCAACAATTTCTCCAGTACAGATGCATGTCTCTTGACCAATTAGTGCTCTGTCTCTaGACTTTAGGACCAATACTC | + |
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Preference number: 4 (lower is better) Translates to: NIKLVQQFLQYRCMSLDQLVLCL*TLGPIL Trigger: GAGTATTGGTCCTAAAGTCCAGAGACAGAGCACTAA...TTGGTCAAGAGACATGCATCTGTACTGGAGAAATTGTTGCACCAGTTTTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549356.1 |
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| CDS-3UTR TCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATGTGAAATTCTTACAATaGCTTCTACTCCAGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHVKFLQ*LLLQLQ Trigger: CTGAAGCTGGAGTAGAAGTCATTGTAAGAATTTCAC...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAGTAAAACAGTCGACATaGCAAACAACCAAATCGGAG | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTVKQST*QTTKSE Trigger: CTCCGATTTGGTTGTTTGTCATGTCGACTGTTTTAC...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACATTATCCCAAGGAATCTaGACACAGATAGGGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTLSQGI*TQIGFP Trigger: AGGAAACCCTATCTGTGTTCAGATTCCTTGGGATAA...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCAGTTTCTTAATAGCTaGGTCTCGTTCCTTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHQFLNS*VSFLSK Trigger: TTTGGAAAGGAACGAGACGCAGCTATTAAGAAACTG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACATACTCCAGCTTCAGTTaGCAGTTTCTTAATAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTYSSFS*QFLNSC Trigger: GCAGCTATTAAGAAACTGGCAACTGAAGCTGGAGTA...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAAGCAACTTCCACTGCTaGTACAACCTGGGATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTSNFHC*YNLGYF Trigger: AAAATATCCCAGGTTGTAGCAGCAGTGGAAGTTGCT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACACATTTGGCTACCTTTTaGATACCTTCTGGTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTHLATF*IPSGAF Trigger: GAATGCACCAGAAGGTATCCAAAAGGTAGCCAAATG...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACATTAGTGCTCTGTCTCTaGACTTTAGGACCAATACTC | + |
|
Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTLVLCL*TLGPIL Trigger: GAGTATTGGTCCTAAAGTCCAGAGACAGAGCACTAA...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATAGAGATCTGTTAGTTTaGAGTAAAACAGTCGACATG | + |
|
Preference number: 4 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHRDLLV*SKTVDM Trigger: CATGTCGACTGTTTTACTTCAAACTAACAGATCTCT...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAAGAGAACTTAACACATaGTACTTCCACAAGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTRELNT*YFHKFG Trigger: CCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACACCATATTTCTCATCATaGTCATCAGACAGAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTPYFSS*SSDRGV Trigger: AACTCCTCTGTCTGATGACCATGATGAGAAATATGG...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACACTCCTATCAAACATTTaGCTACCTTTTGGATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTLLSNI*LPFGYL Trigger: AAGGTATCCAAAAGGTAGCCAAATGTTTGATAGGAG...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
||
| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAAGCATGGTTCACCATTaGTTTAGGATAATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTSMVHH*FRIINS Trigger: GGAGTTAATTATCCTAAACCAATGGTGAACCATGCT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR GCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAGCGTGGATTATTTGTTaGTGCTGTATAGAAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTAWIIC*CCIEKF Trigger: GAATTTTTCTATACAGCAGCAACAAATAATCCACGC...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000008527.10 |
||
| CDS-3UTR CCA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACATTAATTTTCGTAGATTaGCATCAAGATCCTCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TENLTHDTSTSLGLKRFTLIFVD*HQDPQD Trigger: GTCTTGAGGATCTTGATGCCAATCTACGAAAATTAA...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
||
| CDS TCA 90 bp | AAACGGCCCGCCCGAGGTGAGTCACCGAGGAGAACCGGAGGGGAATaGGCCCCTGTCGGCGACGCTGTCTCTCGGCCCGGGAGAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KRPARGESPRRTGGE*APVGDAVSRPGRKD Trigger: GTCCTTTCTCCCGGGCCGAGAGACAGCGTCGCCGACAGGGGCTCATTCCCCTCCGGTTCTCCTCGGTGACTCACCTCGGGCGGGCCGTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
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| CDS CCA 90 bp | ACTCCGAGGAGGGGACCGGAGAAGGCGGGGGCGCCGGAGGCGCAGTaGAAAGATGAATGGAGGTTGCCTAGTCGGCGGAGTCCGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPRRGPEKAGAPEAQ*KDEWRLPSRRSPGV Trigger: CACACCCGGACTCCGCCGACTAGGCAACCTCCATTCATCTTTCCACTGCGCCTCCGGCGCCCCCGCCTTCTCCGGTCCCCTCCTCGGAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
||
| CDS CCA 90 bp | GGACCGGAGAAGGCGGGGGCGCCGGAGGCGCAGTGGAAAGATGAATaGAGGTTGCCTAGTCGGCGGAGTCCGGGTGTGACGCCCTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPEKAGAPEAQWKDE*RLPSRRSPGVTPFR Trigger: CCTAAAGGGCGTCACACCCGGACTCCGCCGACTAGGCAACCTCCATTCATCTTTCCACTGCGCCTCCGGCGCCCCCGCCTTCTCCGGTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
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| CDS CCA 90 bp | TGGAGGAGCCGGCGAACCAGGGGTCCAGGATGTAGACGCAGCGGATaGTGTCGGCGCCCTGAATGCACTCCTTCAGGGCGGGGTTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WRSRRTRGPGCRRSG*CRRPECTPSGRGCR Trigger: ACGACAACCCCGCCCTGAAGGAGTGCATTCAGGGCGCCGACACCATCCGCTGCGTCTACATCCTGGACCCCTGGTTCGCCGGCTCCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
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| CDS GCA 90 bp | AAGGAGGCTCCGGCTCATAGCCGACACCTTCGCTTCCAAGAGAATTaGCTCACCCGGGGCGTGAGGAAAGGGCGGCAGAGGGGGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KEAPAHSRHLRFQEN*LTRGVRKGRQRGNR Trigger: CCTGTTCCCCCTCTGCCGCCCTTTCCTCACGCCCCGGGTGAGGCAATTCTCTTGGAAGCGAAGGTGTCGGCTATGAGCCGGAGCCTCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
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| CDS-3UTR CAA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATGAGGCCGCTGGACGGTaGCCGGCCGGTGACCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHEAAGR*PAGDRS Trigger: GGACCGGTCACCGGCCGGCAACCGTCCAGCGGCCTC...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS TCA 90 bp | CTCTGTCTCTGGACTTTAGGACCAATACTCTGTGTGTCCTCTTCCTaGCTAGGACGTTTCCCACCACTGAGACCAGTGCCCATGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCLWTLGPILCVSSS*LGRFPPLRPVPMEL Trigger: AAGCTCCATGGGCACTGGTCTCAGTGGTGGGAAACGTCCTAGTCAGGAAGAGGACACACAGAGTATTGGTCCTAAAGTCCAGAGACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000008527.10 ENST00000549356.1 ENST00000552790.5 |
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| CDS-3UTR CAA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATTCCTTCAGGGCGGGGTaGTCGTGGAGCCGGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHSFRAG*SWSRSP Trigger: GGGGCTCCGGCTCCACGACAACCCCGCCCTGAAGGA...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS GCA 90 bp | ACTGTGCTCACCGTAGAGAAAAAGCAAACACTAGGCTCCACACCCTaGAGCTACAGGGCTACTACGCTATGCCATCGTAGAATTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: TVLTVEKKQTLGSTP*SYRATTLCHRRIGT Trigger: AGTTCCAATTCTACGATGGCATAGCGTAGTAGCCCTGTAGCTGCAGGGTGTGGAGCCTAGTGTTTGCTTTTTCTCTACGGTGAGCACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552790.5 |
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| CDS CCA 90 bp | CCAAGTGGTCCAACATCCCCAAGCCAAGCTTCCTTTCCTGGTGTTTaGTCTAGGACAACCAAATCAGCCACTTCCAGAAGTAGAAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSGPTSPSQASFPGV*SRTTKSATSRSRNA Trigger: GGCATTTCTACTTCTGGAAGTGGCTGATTTGGTTGTCCTAGACCAAACACCAGGAAAGGAAGCTTGGCTTGGGGATGTTGGACCACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552790.5 |
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| CDS-3UTR CAA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCTGTTGATGCCCACATaGGAGGAGCCGGCGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHLLMPT*EEPANQ Trigger: CTGGTTCGCCGGCTCCTCCAATGTGGGCATCAACAG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACATCGCTTCCAAGAGAATaGCCTCACCCGGGGCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TENLTHDTSTSLGLKRFTSLPRE*PHPGRE Trigger: CTCACGCCCCGGGTGAGGCAATTCTCTTGGAAGCGA...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCGGCCTTCCGCCCATTaGGCTAAAGCCTCAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHRPSAH*AKASGF Trigger: AAATCCTGAGGCTTTAGCCAAATGGGCGGAAGGCCG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS CCA 90 bp | GTTGTCCACGAATCACAAACAGACGGGAGTTTAATTTTCGTAGATTaGCATCAAGATCCTCAAGACACTGAAGCAAAAATCGCCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVHESQTDGSLIFVD*HQDPQDTEAKIATC Trigger: ACAGGTGGCGATTTTTGCTTCAGTGTCTTGAGGATCTTGATGCCAATCTACGAAAATTAAACTCCCGTCTGTTTGTGATTCGTGGACAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS CCA 90 bp | TTCGTAGATTGGCATCAAGATCCTCAAGACACTGAAGCAAAAATCTaGAGTCCACGTAACTGTGCTCACCGTAGAGAAAAAGCAAACACT | + |
|
Preference number: 5 (lower is better) Translates to: FVDWHQDPQDTEAKI*SPRNCAHRREKANT Trigger: AGTGTTTGCTTTTTCTCTACGGTGAGCACAGTTACGTGGACTCCAGATTTTTGCTTCAGTGTCTTGAGGATCTTGATGCCAATCTACGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000552790.5 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAAAAGATGAATGGAGGTaGCCTAGTCGGCGGAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TENLTHDTSTSLGLKRFTKDEWR*PSRRSP Trigger: CGGACTCCGCCGACTAGGCAACCTCCATTCATCTTT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCTTCAACAGGTGAGTTaGCTGACTGTCGCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHLQQVS*LTVAMS Trigger: GCTCATGGCGACAGTCAGCAAACTCACCTGTTGAAG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | AATATAAAACTGGTGCAACAATTTCTCCAGTACAGATGCATGTCTCTTGACCAACTTCAACAGGTGAGTTaGCTGACTGTCGCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NIKLVQQFLQYRCMSLDQLQQVS*LTVAMS Trigger: GCTCATGGCGACAGTCAGCAAACTCACCTGTTGAAG...TTGGTCAAGAGACATGCATCTGTACTGGAGAAATTGTTGCACCAGTTTTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549356.1 |
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| CDS TCA 90 bp | AGCTGCGTCTCGTTCCTTTCCAAAGGGCTCAGAATCATACTCAATTaGAAGTTTAGTAATGTTCCATTCCTTGAAAAGCCTGGGAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: SCVSFLSKGLRIILN*KFSNVPFLEKPGKH Trigger: GTGTTTCCCAGGCTTTTCAAGGAATGGAACATTACTAAACTTTCAATTGAGTATGATTCTGAGCCCTTTGGAAAGGAACGAGACGCAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS CCA 90 bp | GTTGTCCACGAATCACAAACAGACGGGAGTTTAATTTTCGTAGATTaGCATCAAGATCCTCAAGACACTGAAGCAAAAATCTGGAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVHESQTDGSLIFVD*HQDPQDTEAKIWSP Trigger: TGGACTCCAGATTTTTGCTTCAGTGTCTTGAGGATCTTGATGCCAATCTACGAAAATTAAACTCCCGTCTGTTTGTGATTCGTGGACAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552790.5 |
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| CDS-3UTR CAA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATCGATATTCAAACGGCTaGCCTCAGCATGGTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHRYSNG*PQHGSP Trigger: TGGTGAACCATGCTGAGGCAAGCCGTTTGAATATCG...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS GCA 90 bp | AAGCTGCTGATAGATCTGTTTCATCCTTTCGATATTCAAACGGCTTaGCTCAGCATGGTTCACCATTGGTTTAGGATAATTAACTCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: KLLIDLFHPFDIQTA*LSMVHHWFRIINSY Trigger: ATAGGAGTTAATTATCCTAAACCAATGGTGAACCATGCTGAGGCAAGCCGTTTGAATATCGAAAGGATGAAACAGATCTATCAGCAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS CCA 90 bp | CATCCTTTCGATATTCAAACGGCTTGCCTCAGCATGGTTCACCATTaGTTTAGGATAATTAACTCCTATCAAACATTTGGCTACCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HPFDIQTACLSMVHH*FRIINSYQTFGYLL Trigger: CAAAAGGTAGCCAAATGTTTGATAGGAGTTAATTATCCTAAACCAATGGTGAACCATGCTGAGGCAAGCCGTTTGAATATCGAAAGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS-3UTR CAA 90 bp | ACATATACTGTCTGTGTTAACAGAGGCTACAATACCAATTTGGATTACGCACATAAACACATCTGCTGGTaGTCCACGAATCACAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: TYTVCVNRGYNTNLDYAHKHICW*STNHKQ Trigger: CTGTTTGTGATTCGTGGACAACCAGCAGATGTGTTT...ATGTGCGTAATCCAAATTGGTATTGTAGCCTCTGTTAACACAGACAGTATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAGTAATGTTCCATTCCTaGAAAAGCCTGGGAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: TENLTHDTSTSLGLKRFTVMFHS*KSLGNT Trigger: TGTGTTTCCCAGGCTTTTCAAGGAATGGAACATTAC...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACACATCAGACAGAGGAGTaGTGCACTTTTCTATCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TENLTHDTSTSLGLKRFTHQTEE*CTFLSL Trigger: AAGTGATAGAAAAGTGCACAACTCCTCTGTCTGATG...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAACATTTGGCTACCTTTaGGATACCTTCTGGTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: TENLTHDTSTSLGLKRFTTFGYL*DTFWCI Trigger: AATGCACCAGAAGGTATCCAAAAGGTAGCCAAATGT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAGAGGTCTTTCAAAATTaGCCACCCAAGCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TENLTHDTSTSLGLKRFTEVFQN*PPKLFF Trigger: AAAGAAAAGCTTGGGTGGCAAATTTTGAAAGACCTC...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAACTCCTATCAAACATTaGGCTACCTTTTGGATACCT | + |
|
Preference number: 5 (lower is better) Translates to: TENLTHDTSTSLGLKRFTTPIKH*ATFWIP Trigger: AGGTATCCAAAAGGTAGCCAAATGTTTGATAGGAGT...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACACAAAGCGTGGATTATTaGTTGCTGCTGTATAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TENLTHDTSTSLGLKRFTQSVDY*LLLYRK Trigger: TTTTCTATACAGCAGCAACAAATAATCCACGCTTTG...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS-3UTR CAA 90 bp | ACAGAGAACTTAACACATGATACTTCCACAAGTTTGGGTCTAAAAAGGTTTACAGATACTTCCACAAGTTaGGGTCTAAAAAGGTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: TENLTHDTSTSLGLKRFTDTSTS*GLKRFT Trigger: TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATC...TGTAAACCTTTTTAGACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000008527.10 |
||
| CDS CAA 72 bp | CGGAGGCTAGAGGCGGTGGTCGAGGCCGCTGGACGGTaGCCGGCCGGTGACCGGTCCCGAGGCTGCCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRLEAVVEAAGR*PAGDRSRGCPG Trigger: ACCCGGGCAGCCTCGGGACCGGTCACCGGCCGGCAACCGTCCAGCGGCCTCGACCACCGCCTCTAGCCTCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS TCA 72 bp | GCCCGAGGTGAGTCACCGAGGAGAACCGGAGGGGAATaGGCCCCTGTCGGCGACGCTGTCTCTCGGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARGESPRRTGGE*APVGDAVSRPG Trigger: CCCGGGCCGAGAGACAGCGTCGCCGACAGGGGCTCATTCCCCTCCGGTTCTCCTCGGTGACTCACCTCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
||
| CDS CAA 90 bp | GAGAAGGCGGGGGCGCCGGAGGCGCAGTGGAAAGATGAATGGAGGTaGCCTAGTCGGCGGAGTCCGGGTGTGACGCCCTTTAGGAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: EKAGAPEAQWKDEWR*PSRRSPGVTPFRSP Trigger: CGGGCTCCTAAAGGGCGTCACACCCGGACTCCGCCGACTAGGCAACCTCCATTCATCTTTCCACTGCGCCTCCGGCGCCCCCGCCTTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
||
| CDS CCA 72 bp | AAGGCGGGGGCGCCGGAGGCGCAGTGGAAAGATGAATaGAGGTTGCCTAGTCGGCGGAGTCCGGGTGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: KAGAPEAQWKDE*RLPSRRSPGVT Trigger: CGTCACACCCGGACTCCGCCGACTAGGCAACCTCCATTCATCTTTCCACTGCGCCTCCGGCGCCCCCGCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
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| CDS CCA 72 bp | CGGCGAACCAGGGGTCCAGGATGTAGACGCAGCGGATaGTGTCGGCGCCCTGAATGCACTCCTTCAGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RRTRGPGCRRSG*CRRPECTPSGR Trigger: CCGCCCTGAAGGAGTGCATTCAGGGCGCCGACACCATCCGCTGCGTCTACATCCTGGACCCCTGGTTCGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
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| CDS GCA 72 bp | GGATGTAGACGCAGCGGATGGTGTCGGCGCCCTGAATaGACTCCTTCAGGGCGGGGTTGTCGTGGAGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GCRRSGWCRRPE*TPSGRGCRGAG Trigger: TCCGGCTCCACGACAACCCCGCCCTGAAGGAGTGCATTCAGGGCGCCGACACCATCCGCTGCGTCTACATCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
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| CDS CAA 72 bp | GGGGCGCCGGAGGCGCAGTGGAAAGATGAATGGAGGTaGCCTAGTCGGCGGAGTCCGGGTGTGACGCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GAPEAQWKDEWR*PSRRSPGVTPF Trigger: AAAGGGCGTCACACCCGGACTCCGCCGACTAGGCAACCTCCATTCATCTTTCCACTGCGCCTCCGGCGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
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| CDS GCA 72 bp | CCGGCTCATAGCCGACACCTTCGCTTCCAAGAGAATTaGCTCACCCGGGGCGTGAGGAAAGGGCGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PAHSRHLRFQEN*LTRGVRKGRQR Trigger: CCTCTGCCGCCCTTTCCTCACGCCCCGGGTGAGGCAATTCTCTTGGAAGCGAAGGTGTCGGCTATGAGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000550633.1 |
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| CDS TCA 72 bp | CGTGACTCTCCTTCATCTCTGAGACTAAGATGCAACTaGACCACCGCCCCAGCCAAGTGGTCCAACATCCCC | + |
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Preference number: 6 (lower is better) Translates to: RDSPSSLRLRCN*TTAPAKWSNIP Trigger: GGGGATGTTGGACCACTTGGCTGGGGCGGTGGTTCAGTTGCATCTTAGTCTCAGAGATGAAGGAGAGTCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552790.5 |
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| CDS TCA 72 bp | TGGACTTTAGGACCAATACTCTGTGTGTCCTCTTCCTaGCTAGGACGTTTCCCACCACTGAGACCAGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: WTLGPILCVSSS*LGRFPPLRPVP Trigger: GGGCACTGGTCTCAGTGGTGGGAAACGTCCTAGTCAGGAAGAGGACACACAGAGTATTGGTCCTAAAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000008527.10 ENST00000549356.1 ENST00000552790.5 |
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| CDS GCA 72 bp | ACCGTAGAGAAAAAGCAAACACTAGGCTCCACACCCTaGAGCTACAGGGCTACTACGCTATGCCATCGTAGA | + |
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Preference number: 6 (lower is better) Translates to: TVEKKQTLGSTP*SYRATTLCHRR Trigger: TCTACGATGGCATAGCGTAGTAGCCCTGTAGCTGCAGGGTGTGGAGCCTAGTGTTTGCTTTTTCTCTACGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552790.5 |
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| CDS GCA 72 bp | AATGTTCCATTCCTTGAAAAGCCTGGGAAACACATCTaGTGGTTGTCCACGAATCACAAACAGACGGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: NVPFLEKPGKHI*WLSTNHKQTGV Trigger: AACTCCCGTCTGTTTGTGATTCGTGGACAACCAGCAGATGTGTTTCCCAGGCTTTTCAAGGAATGGAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS GCA 72 bp | TTCTACTCCAGCTTCAGTTGCCAGTTTCTTAATAGCTaGGTCTCGTTCCTTTCCAAAGGGCTCAGAATCATA | + |
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Preference number: 6 (lower is better) Translates to: FYSSFSCQFLNS*VSFLSKGLRII Trigger: TATGATTCTGAGCCCTTTGGAAAGGAACGAGACGCAGCTATTAAGAAACTGGCAACTGAAGCTGGAGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS CAA 90 bp | AGGAAAAGGAAAAAGAACAGTATGCTCCAATGCTTCATTCTTACCTaGCTTCAACAGGTGAGTTTGCTGACTGTCGCCATGAGCATAGTG | + |
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Preference number: 6 (lower is better) Translates to: RKRKKNSMLQCFILT*LQQVSLLTVAMSIV Trigger: CACTATGCTCATGGCGACAGTCAGCAAACTCACCTGTTGAAGCAAGGTAAGAATGAAGCATTGGAGCATACTGTTCTTTTTCCTTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000552790.5 |
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| CDS TCA 72 bp | AATTTTCGTAGATTGGCATCAAGATCCTCAAGACACTaGAGCAAAAATCGCCACCTGTTGATGCCCACATTG | + |
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Preference number: 6 (lower is better) Translates to: NFRRLASRSSRH*SKNRHLLMPTL Trigger: CAATGTGGGCATCAACAGGTGGCGATTTTTGCTTCAGTGTCTTGAGGATCTTGATGCCAATCTACGAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000008527.10 |
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| CDS CCA 72 bp | GATATTCAAACGGCTTGCCTCAGCATGGTTCACCATTaGTTTAGGATAATTAACTCCTATCAAACATTTGGC | + |
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Preference number: 6 (lower is better) Translates to: DIQTACLSMVHH*FRIINSYQTFG Trigger: GCCAAATGTTTGATAGGAGTTAATTATCCTAAACCAATGGTGAACCATGCTGAGGCAAGCCGTTTGAATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS GCA 72 bp | TATCAAACATTTGGCTACCTTTTGGATACCTTCTGGTaGATTCCAGGGATCATAGATATATTTTGCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: YQTFGYLLDTFW*IPGIIDIFCRE Trigger: TTCCCTGCAAAATATATCTATGATCCCTGGAATGCACCAGAAGGTATCCAAAAGGTAGCCAAATGTTTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS GCA 72 bp | ATAGATCTGTTTCATCCTTTCGATATTCAAACGGCTTaGCTCAGCATGGTTCACCATTGGTTTAGGATAATT | + |
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Preference number: 6 (lower is better) Translates to: IDLFHPFDIQTA*LSMVHHWFRII Trigger: AATTATCCTAAACCAATGGTGAACCATGCTGAGGCAAGCCGTTTGAATATCGAAAGGATGAAACAGATCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS CCA 72 bp | GAATCACAAACAGACGGGAGTTTAATTTTCGTAGATTaGCATCAAGATCCTCAAGACACTGAAGCAAAAATC | + |
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Preference number: 6 (lower is better) Translates to: ESQTDGSLIFVD*HQDPQDTEAKI Trigger: GATTTTTGCTTCAGTGTCTTGAGGATCTTGATGCCAATCTACGAAAATTAAACTCCCGTCTGTTTGTGATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS TCA 72 bp | TCGTTCCTTTCCAAAGGGCTCAGAATCATACTCAATTaGAAGTTTAGTAATGTTCCATTCCTTGAAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SFLSKGLRIILN*KFSNVPFLEKP Trigger: AGGCTTTTCAAGGAATGGAACATTACTAAACTTTCAATTGAGTATGATTCTGAGCCCTTTGGAAAGGAACGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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| CDS CAA 72 bp | GTTAGAGGCGGTTGTCCACCATTGAGTTCTATGATCTaGTCTAGGTCATATAATGTATGTGAAATTCTTACA | + |
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Preference number: 6 (lower is better) Translates to: VRGGCPPLSSMI*SRSYNVCEILT Trigger: TGTAAGAATTTCACATACATTATATGACCTAGACAAGATCATAGAACTCAATGGTGGACAACCGCCTCTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000008527.10 ENST00000552790.5 |
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