RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRX (Homo sapiens)

Ensembl gene IDs: ENSG00000105392

Ensembl transcript IDs: ENST00000221996.12, ENST00000539067.5, ENST00000566686.5, ENST00000604324.1, ENST00000613299.1

Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGCGGAGGTCAGAGACGGCCCTGAGGCCACCAGCCCAGCCCGCTaGGCCTCAGGCAAAGGGGACTCTGAGGCTGGGCTCCAGATGGAC +
Preference number: 1 (lower is better)
Translates to: GAEVRDGPEATSPAR*ASGKGDSEAGLQMD
Trigger: GTCCATCTGGAGCCCAGCCTCAGAGTCCCCTTTGCCTGAGGCGCAGCGGGCTGGGCTGGTGGCCTCAGGGCCGTCTCTGACCTCCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR GCA 90 bp TGCCCAGAGGGTCTGGACACACATCTGTGGAGGGTCTTGGGGACGTaGCCGCCTTCCTCTTGGCAGGCCGGGCCTTGGCCTGGCCCCCTG +
Preference number: 1 (lower is better)
Translates to: CPEGLDTHLWRVLGT*PPSSWQAGPWPGPL
Trigger: CAGGGGGCCAGGCCAAGGCCCGGCCTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAGACCCTCTGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR CCA 90 bp GACTGTAGGAATCTGAGATGCCCAGAGGGTCTGGACACACATCTGTaGAGGGTCTTGGGGACGTGCCCGCCTTCCTCTTGGCAGGCCGGG +
Preference number: 1 (lower is better)
Translates to: DCRNLRCPEGLDTHL*RVLGTCPPSSWQAG
Trigger: CCCGGCCTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAGACCCTCTGGGCATCTCAGATTCCTACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR CCA 90 bp TCTTGGAGCAAGTTCTCAGCACCACTTTCTGAAGCCTGGAGCTCGTaGTGTACTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTT +
Preference number: 1 (lower is better)
Translates to: SWSKFSAPLSEAWSS*CTSAVTIVPDGVRV
Trigger: AACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAGTACACCACGAGCTCCAGGCTTCAGAAAGTGGTGCTGAGAACTTGCTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CCA 90 bp AGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATaGAGACTGCGTCCTCTACAAGATCTGAAACTTCCAGGCACTCTG +
Preference number: 1 (lower is better)
Translates to: SRFRRERVPRPDGER*RLRPLQDLKLPGTL
Trigger: CAGAGTGCCTGGAAGTTTCAGATCTTGTAGAGGACGCAGTCTCCATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR CCA 90 bp ACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATaGAGAGAGATGGAGACTGCGTCCTCTACAAGATCTGAAACTTCC +
Preference number: 1 (lower is better)
Translates to: TAGKQIQKRKGPEAR*REMETASSTRSETS
Trigger: GGAAGTTTCAGATCTTGTAGAGGACGCAGTCTCCATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR GCA 90 bp GCCCCTTGGCCTTCACTACTTCTCACTCCTTCCCAGAACCTTGCATaGATCCTTCAGTCCCTCCCCAACTCCCATCAAGTTTCTATGACT +
Preference number: 1 (lower is better)
Translates to: APWPSLLLTPSQNLA*ILQSLPNSHQVSMT
Trigger: AGTCATAGAAACTTGATGGGAGTTGGGGAGGGACTGAAGGATGCATGCAAGGTTCTGGGAAGGAGTGAGAAGTAGTGAAGGCCAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CCA 90 bp TTGACTTCTTCTTGGAGCAAGTTCTCAGCACCACTTTCTGAAGCCTaGAGCTCGTGGTGTACTTCAGCGGTCACAATCGTGCCAGACGGT +
Preference number: 1 (lower is better)
Translates to: LTSSWSKFSAPLSEA*SSWCTSAVTIVPDG
Trigger: ACCGTCTGGCACGATTGTGACCGCTGAAGTACACCACGAGCTCCAGGCTTCAGAAAGTGGTGCTGAGAACTTGCTCCAAGAAGAAGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR TCA 90 bp CATCAAGTTTCTATGACTTGTTTGCACAAGACACAGCCTCCCCGGTaGATAAGGAGAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCA +
Preference number: 1 (lower is better)
Translates to: HQVSMTCLHKTQPPR*IRRRFSSTPESRPP
Trigger: TGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTCTCCTTATTCACCGGGGAGGCTGTGTCTTGTGCAAACAAGTCATAGAAACTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR GCA 90 bp TGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTaGACAGACCCAGGGCACAATATTGTCTCATCCCTGCCCCTCCCG +
Preference number: 1 (lower is better)
Translates to: CLRRMKLIVDSGPNV*TDPGHNIVSSLPLP
Trigger: CGGGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR TCA 90 bp GGGCTTAATGTCCCAGAACCCAGCATGACTCAGGCCTATGAGAGATaGACACGTTTTATGTTGAATAAAAACCTCTTTGTGGGCTCTAGA +
Preference number: 1 (lower is better)
Translates to: GLNVPEPSMTQAYER*TRFMLNKNLFVGSR
Trigger: TCTAGAGCCCACAAAGAGGTTTTTATTCAACATAAAACGTGTTCATCTCTCATAGGCCTGAGTCATGCTGGGTTCTGGGACATTAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR TCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCGGTCAGAGACGGCCCTaGGGCCACCAGCCCAGCCCG +
Preference number: 2 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPGQRRP*GHQPSP
Trigger: CGGGCTGGGCTGGTGGCCTCAGGGCCGTCTCTGACC...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCCAGTGGCCACTGCCGTaGTTGGGGAGCCTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPQWPLP*LGSLRG
Trigger: GCCCCTCAGGCTCCCCAACCACGGCAGTGGCCACTG...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR CAA 90 bp AATCTGAGATGCCCAGAGGGTCTGGACACACATCTGTGGAGGGTCTaGGGGACGTGCCCGCCTTCCTCTTGGCAGGCCGGGCCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: NLRCPEGLDTHLWRV*GTCPPSSWQAGPWP
Trigger: AGGCCAAGGCCCGGCCTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAGACCCTCTGGGCATCTCAGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR GCA 90 bp AGAGCACAGTGGCACAATCTCTGCTCTCTTCAACCTCCGCCTCCCGGGTTCCAGACCAGCCCAGCCCGCTaGGCCTCAGGCAAAGGGGAC +
Preference number: 2 (lower is better)
Translates to: RAQWHNLCSLQPPPPGFQTSPAR*ASGKGD
Trigger: GTCCCCTTTGCCTGAGGCGCAGCGGGCTGGGCTGGT...CTGGAACCCGGGAGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTGTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGGGTCCCGAGGCCCGATaGAGAGAGATGGAGACTGCG +
Preference number: 2 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPGPEAR*REMETA
Trigger: CGCAGTCTCCATCTCTCTCCATCGGGCCTCGGGACC...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAGCCGGGCCTGGTGGTaGGCATCTGTAGTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPSRAWW*ASVVPA
Trigger: AGCTGGGACTACAGATGCCCACCACCAGGCCCGGCT...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CCA 90 bp GGAGAACTCGGACTGAGAAGGCAGGGACCCAGCACCCAACTTCTGAGCATCAAAAGGGAGGTGGGGGACTaGGCCAGGGAAGGTCCCACG +
Preference number: 2 (lower is better)
Translates to: GELGLRRQGPSTQLLSIKREVGD*AREGPT
Trigger: CGTGGGACCTTCCCTGGCCCAGTCCCCCACCTCCCT...TTTGATGCTCAGAAGTTGGGTGCTGGGTCCCTGCCTTCTCAGTCCGAGTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGATCTGTGGAGGGTCTTaGGGACGTGCCCGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGICGGS*GRARLP
Trigger: AGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGAT...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CCA 90 bp GGAAAAGCAATCTGTAACCTCCTAGCTGGATTTGGCTCCCTGCCCTCTCCGGCTCCGGGGCGTAGGTCATaGCATAGGGGGCGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: GKAICNLLAGFGSLPSPAPGRRS*HRGRRS
Trigger: TGACCTCCGCCCCCTATGCCATGACCTACGCCCCGG...AGCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGGTTACAGATTGCTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR GCA 90 bp GGAAAAGCAATCTGTAACCTCCTAGCTGGATTTGGCTCCCTGCCCTCTCCGGCTCCTGGGGGCTGCTGCTaGTGTTTCTGCTGCTGTCGC +
Preference number: 2 (lower is better)
Translates to: GKAICNLLAGFGSLPSPAPGGCC*CFCCCR
Trigger: GCGACAGCAGCAGAAACAGCAGCAGCAGCCCCCAGG...AGCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGGTTACAGATTGCTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CCA 90 bp AGAGCACAGTGGCACAATCTCTGCTCTCTTCAACCTCCGCCTCCCGGGTTCCAGCTTCAACCCGGGAGGTaGAGGTTGCAGTCAGTGAGC +
Preference number: 2 (lower is better)
Translates to: RAQWHNLCSLQPPPPGFQLQPGR*RLQSVS
Trigger: GCTCACTGACTGCAACCTCCACCTCCCGGGTTGAAG...CTGGAACCCGGGAGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTGTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR TCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGTGTGAACTCCACCAATaGAGGGCTCTTGGAACCCGC +
Preference number: 2 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGCELHQ*RALGTR
Trigger: GCGGGTTCCAAGAGCCCTTCATTGGTGGAGTTCACA...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR GCA 90 bp GGATCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATCCCCCTGGGGGCTGCTaGTGCTGTTTCTGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: GSKLQGSRFRRERVPRPDPPGGC*CCFCCC
Trigger: ACAGCAGCAGAAACAGCAGCAGCAGCCCCCAGGGGG...ATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGCCACTTTCTGAAGCCTaGAGCTCGTGGTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPPLSEA*SSWCTS
Trigger: TGAAGTACACCACGAGCTCCAGGCTTCAGAAAGTGG...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR TCA 90 bp ATGAAGGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGAAGGCAAAGGGGACTCTaGGGCTGGGCTCCAGATGGA +
Preference number: 2 (lower is better)
Translates to: MKGSWNPPPHPKMKGELGRQRGL*GWAPDG
Trigger: TCCATCTGGAGCCCAGCCTCAGAGTCCCCTTTGCCT...TCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR TCA 90 bp GGAGAACTCGGACTGAGAAGGCAGGGACCCAGCACCCAACTTCTGAGCATCAAATGCCCGTGGGGTCCTTaGATTCCAAGCTATCCACGG +
Preference number: 2 (lower is better)
Translates to: GELGLRRQGPSTQLLSIKCPWGP*IPSYPR
Trigger: CCGTGGATAGCTTGGAATTCAAGGACCCCACGGGCA...TTTGATGCTCAGAAGTTGGGTGCTGGGTCCCTGCCTTCTCAGTCCGAGTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CCA 90 bp ATGAAGGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGACCAATGAAGGGCTCTTaGAACCCGCCTCCCCACCCA +
Preference number: 2 (lower is better)
Translates to: MKGSWNPPPHPKMKGELGPMKGS*NPPPHP
Trigger: TGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCATTGG...TCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CCA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCCGATGGAGAGAGATaGAGACTGCGTCCTCTACAA +
Preference number: 2 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSPDGER*RLRPLQ
Trigger: TTGTAGAGGACGCAGTCTCCATCTCTCTCCATCGGG...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR TCA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCCCATGGGATTGTAGGTaGATTTCCAGGTGCCCGTGG +
Preference number: 2 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSPWDCR*ISRCPW
Trigger: CCACGGGCACCTGGAAATTCACCTACAATCCCATGG...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR GCA 90 bp AGAGCACAGTGGCACAATCTCTGCTCTCTTCAACCTCCGCCTCCCGGGTTCCAGCCATTGTTAGACCTCTaGCAGCACACCACTGTCTTC +
Preference number: 2 (lower is better)
Translates to: RAQWHNLCSLQPPPPGFQPLLDL*QHTTVF
Trigger: GAAGACAGTGGTGTGCTGGCAGAGGTCTAACAATGG...CTGGAACCCGGGAGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTGTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR GCA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTTGTAGGAATCTGAGATaGCCAGAGGGTCTGGACACA +
Preference number: 2 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSCRNLR*PEGLDT
Trigger: TGTGTCCAGACCCTCTGGGCATCTCAGATTCCTACA...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGTGTCAGAAGGACAGCTaGTTCGGGTTGCTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGCQKDS*FGLLSQ
Trigger: CTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACA...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGCCACTTTCTGAAGCCTaGAGCTCGTGGTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGPLSEA*SSWCTS
Trigger: TGAAGTACACCACGAGCTCCAGGCTTCAGAAAGTGG...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGGGTTTGACTTCTTCTTaGAGCAAGTTCTCAGCACCA +
Preference number: 2 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPGLTSS*SKFSAP
Trigger: TGGTGCTGAGAACTTGCTCCAAGAAGAAGTCAAACC...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCCCTCCTAGCTGGATTTaGCTCCCTGCCCTCTCCGGC +
Preference number: 2 (lower is better)
Translates to: GLQCRASVSPKNETYSGFPPSWI*LPALSG
Trigger: GCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGG...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp ATGAAGGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGACTGGACACACATCTGTaGAGGGTCTTGGGGACGTGC +
Preference number: 2 (lower is better)
Translates to: MKGSWNPPPHPKMKGELGLDTHL*RVLGTC
Trigger: GCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAG...TCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR TCA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAACTCAGCACCACTTTCTaGAGCCTGGAGCTCGTGGTG +
Preference number: 2 (lower is better)
Translates to: LSPPALSLFLALGRRTFELSTTF*SLELVV
Trigger: CACCACGAGCTCCAGGCTTCAGAAAGTGGTGCTGAG...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR TCA 90 bp AGAGCACAGTGGCACAATCTCTGCTCTCTTCAACCTCCGCCTCCCGGGTTCCAGCTTCTGAGCATCAAATaGCCTCAATCCGTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: RAQWHNLCSLQPPPPGFQLLSIK*PQSVFR
Trigger: CCTGAAGACGGATTGAGGTCATTTGATGCTCAGAAG...CTGGAACCCGGGAGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTGTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR TCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCCCTGCCCCTCCCGTGTaGATTTTGTCTAGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: GLQCRASVSPKNETYSGFPAPPV*ILSSSP
Trigger: GGGGGAGCTAGACAAAATTCACACGGGAGGGGCAGG...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR TCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCATTCTCTTCCACGCCTaGGTCCCGGCCTCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: GLQCRASVSPKNETYSGFILFHA*VPASSA
Trigger: TGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAAT...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR TCA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTAGGGACTGTAGGAATCTaGGATGCCCAGAGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLGTVGI*DAQRVW
Trigger: CCAGACCCTCTGGGCATCTCAGATTCCTACAGTCCC...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR GCA 90 bp AGAGCACAGTGGCACAATCTCTGCTCTCTTCAACCTCCGCCTCCCGGGTTCCAGTCCCGGGATCTAAACTaGAGGGAAGCAGATTCAGAA +
Preference number: 2 (lower is better)
Translates to: RAQWHNLCSLQPPPPGFQSRDLN*READSE
Trigger: TTCTGAATCTGCTTCCCTGCAGTTTAGATCCCGGGA...CTGGAACCCGGGAGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTGTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR GCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGATGCTGCTGCTGTTTCTaGTGCTGTCGCTGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGCCCCF*CCRCCL
Trigger: CAGGCAGCAGCGACAGCAGCAGAAACAGCAGCAGCA...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR TCA 90 bp GGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGACTGAGCTTCTGAGCATCAAATaGCCTCAATCCGTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: GLLEPASPPKNERRTRTELLSIK*PQSVFR
Trigger: CCTGAAGACGGATTGAGGTCATTTGATGCTCAGAAG...CTCAGTCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR GCA 90 bp ATGTTGAATAAAAACCTCTTTGTGGGCTCTAGAGATCAGGGTGTACCCCTCAGGAGGGTCTTGGGGACGTaGCCGCCTTCCTCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: MLNKNLFVGSRDQGVPLRRVLGT*PPSSWQ
Trigger: CTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCT...CCTGAGGGGTACACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTATTCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CCA 90 bp GGAAAAGCAATCTGTAACCTCCTAGCTGGATTTGGCTCCCTGCCCTCTCCGGCTTGTCAGAAGGACAGCTaGTTCGGGTTGCTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: GKAICNLLAGFGSLPSPACQKDS*FGLLSQ
Trigger: CTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACA...AGCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGGTTACAGATTGCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGGTTTGACTTCTTCTTaGAGCAAGTTCTCAGCACCA +
Preference number: 2 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGGLTSS*SKFSAP
Trigger: TGGTGCTGAGAACTTGCTCCAAGAAGAAGTCAAACC...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAGTGATGGGGGCCCCTTaGCCTTCACTACTTCTCACT +
Preference number: 2 (lower is better)
Translates to: LSPPALSLFLALGRRTFEVMGAP*PSLLLT
Trigger: AGTGAGAAGTAGTGAAGGCCAAGGGGCCCCCATCAC...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTCTCAGGGAGGCTCCTaGCTTCTTCCTTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: GLQCRASVSPKNETYSGFSQGGS*LLPSVP
Trigger: GGGGACAGAAGGAAGAAGCCAGGAGCCTCCCTGAGA...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR GCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCCAGCGGTCACAATCGTaGCAGACGGTGTTAGGGTTG +
Preference number: 2 (lower is better)
Translates to: SPPALSLFLALGRRTFEIQRSQS*QTVLGL
Trigger: CAACCCTAACACCGTCTGGCACGATTGTGACCGCTG...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCGAAGCCTGGAGCTCGTaGTGTACTTCAGCGGTCACA +
Preference number: 2 (lower is better)
Translates to: GLQCRASVSPKNETYSGFEAWSS*CTSAVT
Trigger: TGTGACCGCTGAAGTACACCACGAGCTCCAGGCTTC...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCAAGCCACAACTATAGGTaGTACGTCCCAAGCAGCTAC +
Preference number: 2 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSSHNYR*YVPSSY
Trigger: GTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCT...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGCCGGGCCCCCTAGCTaGGGCACCATGGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFAGPPS*GTMGER
Trigger: CCTTTCTCCCATGGTGCCCCAGCTAGGGGGCCCGGC...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR CAA 90 bp GTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTaGCACAGACCCAGGGCACAATATTGTCTCATCCCTGCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: VSPKNETYSGFWSQR*HRPRAQYCLIPAPP
Trigger: GGGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR TCA 90 bp CCACATCATTGGCCTAAGGTTTCCCGACGGGGCTTCTTAAAGTCTGTCTTTGGAGTGGTCTCTGTAAGCTaGACACCGAGCTGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: PHHWPKVSRRGFLKSVFGVVSVS*TPSCQK
Trigger: CTTCTGACAGCTCGGTGTTCAGCTTACAGAGACCAC...TCCAAAGACAGACTTTAAGAAGCCCCGTCGGGAAACCTTAGGCCAATGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR TCA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACCTCAGCACCACTTTCTaGAGCCTGGAGCTCGTGGTG +
Preference number: 2 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHLSTTF*SLELVV
Trigger: CACCACGAGCTCCAGGCTTCAGAAAGTGGTGCTGAG...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR TCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGCAGGCCTATGAGAGATaGACACGTTTTATGTTGAAT +
Preference number: 2 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGQAYER*TRFMLN
Trigger: ATTCAACATAAAACGTGTTCATCTCTCATAGGCCTG...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR TCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCCCCACACTGGACTCTTaGGCCACTCCTGGGTTATTT +
Preference number: 2 (lower is better)
Translates to: GLQCRASVSPKNETYSGFPTLDS*ATPGLF
Trigger: AAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGG...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CAA 90 bp ACAAACACTCCACAACCAACCTTTTCCTCTTCCTTGGAGAGCCCATaGTTAGACCTCTGCCAGCACACCACTGTCTTCCTGCCCTACTTT +
Preference number: 2 (lower is better)
Translates to: TNTPQPTFSSSLESP*LDLCQHTTVFLPYF
Trigger: AAAGTAGGGCAGGAAGACAGTGGTGTGCTGGCAGAGGTCTAACAATGGGCTCTCCAAGGAAGAGGAAAAGGTTGGTTGTGGAGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR TCA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCAAAGGGAATGTATGTTTaGAATGTAGGGCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSKGMYV*NVGLPP
Trigger: AGGAGGCAGCCCTACATTTCAAACATACATTCCCTT...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR TCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCACACAGCCTCCCCGGTaGATAAGGAGAAGATTCTCT +
Preference number: 2 (lower is better)
Translates to: SPPALSLFLALGRRTFEITQPPR*IRRRFS
Trigger: AGAGAATCTTCTCCTTATTCACCGGGGAGGCTGTGT...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR TCA 90 bp GGAAAAGCAATCTGTAACCTCCTAGCTGGATTTGGCTCCCTGCCCTCTCCGGCTCCCATCAAGTTTCTATaGCTTGTTTGCACAAGACAC +
Preference number: 2 (lower is better)
Translates to: GKAICNLLAGFGSLPSPAPIKFL*LVCTRH
Trigger: GTGTCTTGTGCAAACAAGTCATAGAAACTTGATGGG...AGCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGGTTACAGATTGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR GCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCTCCTTCCCAGAACCTTaGATGCATCCTTCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SPPALSLFLALGRRTFEISFPEP*MHPSVP
Trigger: AGGGACTGAAGGATGCATGCAAGGTTCTGGGAAGGA...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR GCA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGCAGCGGTCACAATCGTaGCAGACGGTGTTAGGGTTG +
Preference number: 2 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLQRSQS*QTVLGL
Trigger: CAACCCTAACACCGTCTGGCACGATTGTGACCGCTG...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTAAAATTCTGTCCACGTaGAAAGTTAAGTTATCAAGC +
Preference number: 2 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSKILST*KVKLSS
Trigger: GCTTGATAACTTAACTTTCCACGTGGACAGAATTTT...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CAA 90 bp ATGCATCCTTCAGTCCCTCCCCAACTCCCATCAAGTTTCTATGACTaGTTTGCACAAGACACAGCCTCCCCGGTGAATAAGGAGAAGATT +
Preference number: 2 (lower is better)
Translates to: MHPSVPPQLPSSFYD*FAQDTASPVNKEKI
Trigger: AATCTTCTCCTTATTCACCGGGGAGGCTGTGTCTTGTGCAAACAAGTCATAGAAACTTGATGGGAGTTGGGGAGGGACTGAAGGATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR GCA 90 bp ATGTTGAATAAAAACCTCTTTGTGGGCTCTAGAGATCAGGGTGTACCCCTCAGGCCATTGTTAGACCTCTaGCAGCACACCACTGTCTTC +
Preference number: 2 (lower is better)
Translates to: MLNKNLFVGSRDQGVPLRPLLDL*QHTTVF
Trigger: GAAGACAGTGGTGTGCTGGCAGAGGTCTAACAATGG...CCTGAGGGGTACACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTATTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CCA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATAAAAACCTCTTTGTaGGCTCTAGAGATCAGGGTG +
Preference number: 2 (lower is better)
Translates to: LSPPALSLFLALGRRTFEIKTSL*ALEIRV
Trigger: CACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTAT...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTCTAGCTGGGGCACCATaGGAGAAAGGTAGGGGTCTA +
Preference number: 2 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCLAGAP*EKGRGL
Trigger: TAGACCCCTACCTTTCTCCCATGGTGCCCCAGCTAG...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR TCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTGGTCTCTGTAAGCTaGACACCGAGCTGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFVVSVS*TPSCQK
Trigger: CTTCTGACAGCTCGGTGTTCAGCTTACAGAGACCAC...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR GCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTACAGCTGGTTCGGGTTaGTTTCTCAGGAATGCCATC +
Preference number: 2 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCTAGSG*FLRNAI
Trigger: GATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGT...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTTGTCAGAAGGACAGCTaGTTCGGGTTGCTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCCQKDS*FGLLSQ
Trigger: CTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACA...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR GCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTTCCCGGGATCTAAACTaGAGGGAAGCAGATTCAGAA +
Preference number: 2 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCSRDLN*READSE
Trigger: TTCTGAATCTGCTTCCCTGCAGTTTAGATCCCGGGA...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CCA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACAAAATTCTGTCCACGTaGAAAGTTAAGTTATCAAGC +
Preference number: 2 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHKILST*KVKLSS
Trigger: GCTTGATAACTTAACTTTCCACGTGGACAGAATTTT...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CCA 72 bp GCCCAGAGGGTCTGGACACACATCTGTGGAGGGTCTTaGGGACGTGCCCGCCTTCCTCTTGGCAGGCCGGGC +
Preference number: 3 (lower is better)
Translates to: AQRVWTHICGGS*GRARLPLGRPG
Trigger: GCCCGGCCTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAGACCCTCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR CCA 72 bp GGGAAGAGCAGAAAGCGGAGGCCGGGGCGTAGGTCATaGCATAGGGGGCGGAGGTCAGAGACGGCCCTGAGG +
Preference number: 3 (lower is better)
Translates to: GKSRKRRPGRRS*HRGRRSETALR
Trigger: CCTCAGGGCCGTCTCTGACCTCCGCCCCCTATGCCATGACCTACGCCCCGGCCTCCGCTTTCTGCTCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR GCA 72 bp GGTCTGGACACACATCTGTGGAGGGTCTTGGGGACGTaGCCGCCTTCCTCTTGGCAGGCCGGGCCTTGGCCT +
Preference number: 3 (lower is better)
Translates to: GLDTHLWRVLGT*PPSSWQAGPWP
Trigger: AGGCCAAGGCCCGGCCTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR TCA 72 bp GGGGCACCATGGGAGAAAGGTAGGGGTCTAGGCCGCTaGAATAGGAGCTCGGAGACCCATAGGCGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: GAPWEKGRGLGR*NRSSETHRRRG
Trigger: CCCCCTCCGCCTATGGGTCTCCGAGCTCCTATTTCAGCGGCCTAGACCCCTACCTTTCTCCCATGGTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CAA 90 bp AACGTTTGCACAGACCCAGGGCACAATATTGTCTCATCCCTGCCCCTCCCGTGTTGGCCACTGCCGTGGTaGGGGAGCCTGAGGGGCCGG +
Preference number: 3 (lower is better)
Translates to: NVCTDPGHNIVSSLPLPCWPLPW*GSLRGR
Trigger: CCGGCCCCTCAGGCTCCCCAACCACGGCAGTGGCCA...ACACGGGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR CCA 72 bp AGCTGGATTTGGCTCCCTGCCCTCTCCGGCTCCTGGTaGAGTCTCAGAAGACCCCAGGATCAGGCTCTCTCG +
Preference number: 3 (lower is better)
Translates to: SWIWLPALSGSW*SLRRPQDQALS
Trigger: CGAGAGAGCCTGATCCTGGGGTCTTCTGAGACTCCACCAGGAGCCGGAGAGGGCAGGGAGCCAAATCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CCA 72 bp AATCTGAGATGCCCAGAGGGTCTGGACACACATCTGTaGAGGGTCTTGGGGACGTGCCCGCCTTCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: NLRCPEGLDTHL*RVLGTCPPSSW
Trigger: CCAAGAGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAGACCCTCTGGGCATCTCAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CAA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGTTCTGGTCCCAACGTTaGCACAGACCCAGGGCACAA +
Preference number: 3 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGFWSQR*HRPRAQ
Trigger: TTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGAA...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CAA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTGACAGCTGGTTCGGGTaGCTTTCTCAGGAATGCCAT +
Preference number: 3 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSDSWFG*LSQECH
Trigger: ATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTC...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CAA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGTCCCACACTGGACTCTaGAGCCACTCCTGGGTTATT +
Preference number: 3 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGSHTGL*SHSWVI
Trigger: AATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGA...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CAA 90 bp GGAAAAGCAATCTGTAACCTCCTAGCTGGATTTGGCTCCCTGCCCTCTCCGGCTGACAGCTGGTTCGGGTaGCTTTCTCAGGAATGCCAT +
Preference number: 3 (lower is better)
Translates to: GKAICNLLAGFGSLPSPADSWFG*LSQECH
Trigger: ATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTC...AGCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGGTTACAGATTGCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR GCA 72 bp GAACACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTaGTTTCTCAGGAATGCCATCCCGGGATCTAAACTG +
Preference number: 3 (lower is better)
Translates to: EHRAVRRTAGSG*FLRNAIPGSKL
Trigger: CAGTTTAGATCCCGGGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR GCA 72 bp CCTGGAGCTCGTGGTGTACTTCAGCGGTCACAATCGTaGCAGACGGTGTTAGGGTTGAGAGAATCACTAGGA +
Preference number: 3 (lower is better)
Translates to: PGARGVLQRSQS*QTVLGLRESLG
Trigger: TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAGTACACCACGAGCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CCA 72 bp AAGTTCTCAGCACCACTTTCTGAAGCCTGGAGCTCGTaGTGTACTTCAGCGGTCACAATCGTGCCAGACGGT +
Preference number: 3 (lower is better)
Translates to: KFSAPLSEAWSS*CTSAVTIVPDG
Trigger: ACCGTCTGGCACGATTGTGACCGCTGAAGTACACCACGAGCTCCAGGCTTCAGAAAGTGGTGCTGAGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CAA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCACCCAGGGCACAATATaGTCTCATCCCTGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: SPPALSLFLALGRRTFEITQGTI*SHPCPS
Trigger: GGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGT...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR GCA 72 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTaGAGAGCTTCCGTGTCTCCGAAGAATGAAACTTAT +
Preference number: 3 (lower is better)
Translates to: EDSLPRLSPGLQ*RASVSPKNETY
Trigger: ATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CCA 72 bp TCTTGGAGCAAGTTCTCAGCACCACTTTCTGAAGCCTaGAGCTCGTGGTGTACTTCAGCGGTCACAATCGTG +
Preference number: 3 (lower is better)
Translates to: SWSKFSAPLSEA*SSWCTSAVTIV
Trigger: CACGATTGTGACCGCTGAAGTACACCACGAGCTCCAGGCTTCAGAAAGTGGTGCTGAGAACTTGCTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CCA 72 bp AGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATaGAGACTGCGTCCTCTACAAGATCTGAAACTTCCA +
Preference number: 3 (lower is better)
Translates to: RRERVPRPDGER*RLRPLQDLKLP
Trigger: TGGAAGTTTCAGATCTTGTAGAGGACGCAGTCTCCATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR CCA 72 bp AAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATaGAGAGAGATGGAGACTGCGTCCTCTACAAGATCT +
Preference number: 3 (lower is better)
Translates to: KQIQKRKGPEAR*REMETASSTRS
Trigger: AGATCTTGTAGAGGACGCAGTCTCCATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR-3UTR CAA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTAGACAGCTGGTTCGGGTaGCTTTCTCAGGAATGCCAT +
Preference number: 3 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLDSWFG*LSQECH
Trigger: ATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTC...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CAA 90 bp AGAGCACAGTGGCACAATCTCTGCTCTCTTCAACCTCCGCCTCCCGGGTTCCAGTATGAATGTAGATCTTaGTCTCTCAAACGGTCCCCT +
Preference number: 3 (lower is better)
Translates to: RAQWHNLCSLQPPPPGFQYECRS*SLKRSP
Trigger: AGGGGACCGTTTGAGAGACAAAGATCTACATTCATA...CTGGAACCCGGGAGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CAA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCCTCCTTCCCAGAACCTaGCATGCATCCTTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: SPPALSLFLALGRRTFEILLPRT*HASFSP
Trigger: GGGACTGAAGGATGCATGCAAGGTTCTGGGAAGGAG...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR TCA 72 bp GGCCCACTCCTGGGCTTAATGTCCCAGAACCCAGCATaGCTCAGGCCTATGAGAGATGAACACGTTTTATGT +
Preference number: 3 (lower is better)
Translates to: GPLLGLMSQNPA*LRPMRDEHVLC
Trigger: ACATAAAACGTGTTCATCTCTCATAGGCCTGAGTCATGCTGGGTTCTGGGACATTAAGCCCAGGAGTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR TCA 72 bp TCCTTCAGTCCCTCCCCAACTCCCATCAAGTTTCTATaGCTTGTTTGCACAAGACACAGCCTCCCCGGTGAA +
Preference number: 3 (lower is better)
Translates to: SFSPSPTPIKFL*LVCTRHSLPGE
Trigger: TTCACCGGGGAGGCTGTGTCTTGTGCAAACAAGTCATAGAAACTTGATGGGAGTTGGGGAGGGACTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CAA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCAGACGGTGTTAGGGTaGAGAGAATCACTAGGACCT +
Preference number: 3 (lower is better)
Translates to: LCEIATTIGGTSQAATPVQTVLG*RESLGP
Trigger: AGGTCCTAGTGATTCTCTCAACCCTAACACCGTCTG...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CAA 90 bp AACGTTTGCACAGACCCAGGGCACAATATTGTCTCATCCCTGCCCCTCCCGTGTTATGAATGTAGATCTTaGTCTCTCAAACGGTCCCCT +
Preference number: 3 (lower is better)
Translates to: NVCTDPGHNIVSSLPLPCYECRS*SLKRSP
Trigger: AGGGGACCGTTTGAGAGACAAAGATCTACATTCATA...ACACGGGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CAA 90 bp GGAGAACTCGGACTGAGAAGGCAGGGACCCAGCACCCAACTTCTGAGCATCAAACCCTCTTCCTATCTCTaGTTTATTTACAGATGGGAG +
Preference number: 3 (lower is better)
Translates to: GELGLRRQGPSTQLLSIKPSSYL*FIYRWE
Trigger: CTCCCATCTGTAAATAAACAAGAGATAGGAAGAGGG...TTTGATGCTCAGAAGTTGGGTGCTGGGTCCCTGCCTTCTCAGTCCGAGTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CAA 90 bp AGATGGAACAGGCAAGGTGCCTTTCATTTCCCTACCAAATACACACATTCCCAAGTGCCCGTGGGGTCCTaGAATTCCAAGCTATCCACG +
Preference number: 3 (lower is better)
Translates to: RWNRQGAFHFPTKYTHSQVPVGS*NSKLST
Trigger: CGTGGATAGCTTGGAATTCAAGGACCCCACGGGCAC...TTGGGAATGTGTGTATTTGGTAGGGAAATGAAAGGCACCTTGCCTGTTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
3UTR TCA 72 bp ATATTGTGCCCTATCTCTTCCCAACTCTTAGTTCAGTaGCCTCCGGTTGCTAGCTTGAAGTCAGCCGTGGTG +
Preference number: 3 (lower is better)
Translates to: ILCPISSQLLVQ*PPVASLKSAVV
Trigger: CACCACGGCTGACTTCAAGCTAGCAACCGGAGGTCACTGAACTAAGAGTTGGGAAGAGATAGGGCACAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR TCA 72 bp TCTATGACTTGTTTGCACAAGACACAGCCTCCCCGGTaGATAAGGAGAAGATTCTCTTCCACGCCTGAGTCC +
Preference number: 3 (lower is better)
Translates to: SMTCLHKTQPPR*IRRRFSSTPES
Trigger: GGACTCAGGCGTGGAAGAGAATCTTCTCCTTATTCACCGGGGAGGCTGTGTCTTGTGCAAACAAGTCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CAA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCGTTTCTATGACTTGTTaGCACAAGACACAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: SPPALSLFLALGRRTFEIVSMTC*HKTQPP
Trigger: GGGAGGCTGTGTCTTGTGCAAACAAGTCATAGAAAC...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CAA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACCAGACGGTGTTAGGGTaGAGAGAATCACTAGGACCT +
Preference number: 3 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHQTVLG*RESLGP
Trigger: AGGTCCTAGTGATTCTCTCAACCCTAACACCGTCTG...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR-3UTR CAA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTAAAGGGAATGTATGTTaGAAATGTAGGGCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: LCEIATTIGGTSQAATPVKGNVC*KCRAAS
Trigger: GGAGGCAGCCCTACATTTCAAACATACATTCCCTTT...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CAA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCCTCTTCCTATCTCTaGTTTATTTACAGATGGGAG +
Preference number: 3 (lower is better)
Translates to: LCEIATTIGGTSQAATPVPSSYL*FIYRWE
Trigger: CTCCCATCTGTAAATAAACAAGAGATAGGAAGAGGG...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR-3UTR CAA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTCAAGTTTCTATGACTaGTTTGCACAAGACACAGCC +
Preference number: 3 (lower is better)
Translates to: GLQCRASVSPKNETYSGFSSFYD*FAQDTA
Trigger: GGCTGTGTCTTGTGCAAACAAGTCATAGAAACTTGA...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR GCA 72 bp AGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTaGACAGACCCAGGGCACAATATTGTCTCATCCCTG +
Preference number: 3 (lower is better)
Translates to: RMKLIVDSGPNV*TDPGHNIVSSL
Trigger: CAGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CAA 72 bp TGCCCAGAGGGTCTGGACACACATCTGTGGAGGGTCTaGGGGACGTGCCCGCCTTCCTCTTGGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: CPEGLDTHLWRV*GTCPPSSWQAG
Trigger: CCCGGCCTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAGACCCTCTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
CDS-3UTR TCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCGATCTTCGGGGACACTaGGGCCCAAGTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPDLRGH*GPSQGA
Trigger: GGCCCCCTGACTTGGGCCTCAGTGTCCCCGAAGATC...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGACCAGCCCAGCCCGCTaGGCCTCAGGCAAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPTSPAR*ASGKGD
Trigger: GTCCCCTTTGCCTGAGGCGCAGCGGGCTGGGCTGGT...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCGGTCCCGAGGCCCGATaGAGAGAGATGGAGACTGCG +
Preference number: 4 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPGPEAR*REMETA
Trigger: CGCAGTCTCCATCTCTCTCCATCGGGCCTCGGGACC...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCAGGGGTCTAGGCCGCTaGAATAGGAGCTCGGAGACC +
Preference number: 4 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPRGLGR*NRSSET
Trigger: GGTCTCCGAGCTCCTATTTCAGCGGCCTAGACCCCT...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGCCTGGGGGCTGCTGCTaGTGTTTCTGCTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPPGGCC*CFCCCR
Trigger: GCGACAGCAGCAGAAACAGCAGCAGCAGCCCCCAGG...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGCCCCCTGGGGGCTGCTaGTGCTGTTTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPPPGGC*CCFCCC
Trigger: ACAGCAGCAGAAACAGCAGCAGCAGCCCCCAGGGGG...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGACCAGCCCAGCCCGCTaGGCCTCAGGCAAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGTSPAR*ASGKGD
Trigger: GTCCCCTTTGCCTGAGGCGCAGCGGGCTGGGCTGGT...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCATCTGTGGAGGGTCTTaGGGACGTGCCCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPICGGS*GRARLP
Trigger: AGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGAT...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp AGAGCACAGTGGCACAATCTCTGCTCTCTTCAACCTCCGCCTCCCGGGTTCCAGAGGGAGGTGGGGGACTaGGCCAGGGAAGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: RAQWHNLCSLQPPPPGFQREVGD*AREGPT
Trigger: CGTGGGACCTTCCCTGGCCCAGTCCCCCACCTCCCT...CTGGAACCCGGGAGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTGTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTGATCTTCGGGGACACTaGGGCCCAAGTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSDLRGH*GPSQGA
Trigger: GGCCCCCTGACTTGGGCCTCAGTGTCCCCGAAGATC...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCGGGACTGTAGGAATCTaGGATGCCCAGAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPGTVGI*DAQRVW
Trigger: CCAGACCCTCTGGGCATCTCAGATTCCTACAGTCCC...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GCCTCAGGCAAAGGGGACTCTGAGGCTGGGCTCCAGATGGACACAGTGGCCACTAGGGGTCTAGGCCGCTaGAATAGGAGCTCGGAGACC +
Preference number: 4 (lower is better)
Translates to: ASGKGDSEAGLQMDTVATRGLGR*NRSSET
Trigger: GGTCTCCGAGCTCCTATTTCAGCGGCCTAGACCCCT...AGTGGCCACTGTGTCCATCTGGAGCCCAGCCTCAGAGTCCCCTTTGCCTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613299.1
CDS-3UTR TCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCTGTGAACTCCACCAATaGAGGGCTCTTGGAACCCGC +
Preference number: 4 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPCELHQ*RALGTR
Trigger: GCGGGTTCCAAGAGCCCTTCATTGGTGGAGTTCACA...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGAGGGTCTTGGGGACGTaGCCGCCTTCCTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGRVLGT*PPSSWQ
Trigger: CTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCT...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGCTGGACACACATCTGTaGAGGGTCTTGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPLDTHL*RVLGTC
Trigger: GCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAG...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GGAGAACTCGGACTGAGAAGGCAGGGACCCAGCACCCAACTTCTGAGCATCAAACAGTGGCCACTGCCGTaGTTGGGGAGCCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GELGLRRQGPSTQLLSIKQWPLP*LGSLRG
Trigger: GCCCCTCAGGCTCCCCAACCACGGCAGTGGCCACTG...TTTGATGCTCAGAAGTTGGGTGCTGGGTCCCTGCCTTCTCAGTCCGAGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTAGGCAAAGGGGACTCTaGGGCTGGGCTCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSRQRGL*GWAPDG
Trigger: TCCATCTGGAGCCCAGCCTCAGAGTCCCCTTTGCCT...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp CCTCCGGTTGCTAGCTTGAAGTCAGCCGTGGTGGGAGTATTTACACCACGGAAAACCAGCCCAGCCCGCTaGGCCTCAGGCAAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PPVASLKSAVVGVFTPRKTSPAR*ASGKGD
Trigger: GTCCCCTTTGCCTGAGGCGCAGCGGGCTGGGCTGGT...TTTCCGTGGTGTAAATACTCCCACCACGGCTGACTTCAAGCTAGCAACCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGACAGTGGCCACTGCCGTaGTTGGGGAGCCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGQWPLP*LGSLRG
Trigger: GCCCCTCAGGCTCCCCAACCACGGCAGTGGCCACTG...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCCCGGGGCGTAGGTCATaGCATAGGGGGCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSPGRRS*HRGRRS
Trigger: TGACCTCCGCCCCCTATGCCATGACCTACGCCCCGG...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGCTCTCCGGCTCCTGGTaGAGTCTCAGAAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGLSGSW*SLRRPQ
Trigger: CTGGGGTCTTCTGAGACTCCACCAGGAGCCGGAGAG...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCTCCCCTGTGCACAGCTaGAAGAACCAACACTCAGGA +
Preference number: 4 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPSPVHS*KNQHSG
Trigger: TCCTGAGTGTTGGTTCTTCCAGCTGTGCACAGGGGA...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGTCCCAGAACCCAGCATaGCTCAGGCCTATGAGAGAT +
Preference number: 4 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPSQNPA*LRPMRD
Trigger: ATCTCTCATAGGCCTGAGTCATGCTGGGTTCTGGGA...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGATTCTCTTCCACGCCTaGGTCCCGGCCTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMILFHA*VPASSA
Trigger: TGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAAT...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGACTGAGATTCTCTTCCACGCCTaGGTCCCGGCCTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GLLEPASPPKNERRTRTEILFHA*VPASSA
Trigger: TGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAAT...CTCAGTCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp AACGTTTGCACAGACCCAGGGCACAATATTGTCTCATCCCTGCCCCTCCCGTGTCCCCCTGGGGGCTGCTaGTGCTGTTTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NVCTDPGHNIVSSLPLPCPPGGC*CCFCCC
Trigger: ACAGCAGCAGAAACAGCAGCAGCAGCCCCCAGGGGG...ACACGGGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp TGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATAGGGTCTTGGGGACGTaGCCGCCTTCCTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: CREADSEEKGSRGPMERDRVLGT*PPSSWQ
Trigger: CTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCT...ATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CCTCCGGTTGCTAGCTTGAAGTCAGCCGTGGTGGGAGTATTTACACCACGGAAACTTCCTGGGGGCGCTTaGGTAGGGCACAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PPVASLKSAVVGVFTPRKLPGGA*VGHSLV
Trigger: CACCAGGCTGTGCCCTACCCAAGCGCCCCCAGGAAG...TTTCCGTGGTGTAAATACTCCCACCACGGCTGACTTCAAGCTAGCAACCGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221996.12
CDS-3UTR CCA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAGCCGGGCCCCCTAGCTaGGGCACCATGGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LSPPALSLFLALGRRTFEAGPPS*GTMGER
Trigger: CCTTTCTCCCATGGTGCCCCAGCTAGGGGGCCCGGC...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCTTCAACCCGGGAGGTaGAGGTTGCAGTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSLQPGR*RLQSVS
Trigger: GCTCACTGACTGCAACCTCCACCTCCCGGGTTGAAG...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp AGAGCACAGTGGCACAATCTCTGCTCTCTTCAACCTCCGCCTCCCGGGTTCCAGTCTCAGGGAGGCTCCTaGCTTCTTCCTTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RAQWHNLCSLQPPPPGFQSQGGS*LLPSVP
Trigger: GGGGACAGAAGGAAGAAGCCAGGAGCCTCCCTGAGA...CTGGAACCCGGGAGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACGGTCAGAGACGGCCCTaGGGCCACCAGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHGQRRP*GHQPSP
Trigger: CGGGCTGGGCTGGTGGCCTCAGGGCCGTCTCTGACC...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGTGCCCGTGGGGTCCTTaGATTCCAAGCTATCCACGG +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMCPWGP*IPSYPR
Trigger: CCGTGGATAGCTTGGAATTCAAGGACCCCACGGGCA...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGCTCAGCACCACTTTCTaGAGCCTGGAGCTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMLSTTF*SLELVV
Trigger: CACCACGAGCTCCAGGCTTCAGAAAGTGGTGCTGAG...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCCCAGCACCCAACTTCTaGGCATCAAATGACCTCAAT +
Preference number: 4 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPPAPNF*ASNDLN
Trigger: ATTGAGGTCATTTGATGCTCAGAAGTTGGGTGCTGG...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGTGCTGCTGCTGTTTCTaGTGCTGTCGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMCCCCF*CCRCCL
Trigger: CAGGCAGCAGCGACAGCAGCAGAAACAGCAGCAGCA...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCAGCGGTCACAATCGTaGCAGACGGTGTTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSQRSQS*QTVLGL
Trigger: CAACCCTAACACCGTCTGGCACGATTGTGACCGCTG...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGTCCTTCCCAGAACCTTaGATGCATCCTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPSFPEP*MHPSVP
Trigger: AGGGACTGAAGGATGCATGCAAGGTTCTGGGAAGGA...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGATCTGTGGAGGGTCTTaGGGACGTGCCCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMEICGGS*GRARLP
Trigger: AGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGAT...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CCACATCATTGGCCTAAGGTTTCCCGACGGGGCTTCTTAAAGTCTGTCTTTGGAGCCGGGCCCCCTAGCTaGGGCACCATGGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PHHWPKVSRRGFLKSVFGAGPPS*GTMGER
Trigger: CCTTTCTCCCATGGTGCCCCAGCTAGGGGGCCCGGC...TCCAAAGACAGACTTTAAGAAGCCCCGTCGGGAAACCTTAGGCCAATGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTGAAGCCTGGAGCTCGTaGTGTACTTCAGCGGTCACA +
Preference number: 4 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSEAWSS*CTSAVT
Trigger: TGTGACCGCTGAAGTACACCACGAGCTCCAGGCTTC...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GCCTCAGGCAAAGGGGACTCTGAGGCTGGGCTCCAGATGGACACAGTGGCCACTTGTGTGCACCTCTTCTaGTCTAGTGCTGGAAACGTC +
Preference number: 4 (lower is better)
Translates to: ASGKGDSEAGLQMDTVATCVHLF*SSAGNV
Trigger: GACGTTTCCAGCACTAGACCAGAAGAGGTGCACACA...AGTGGCCACTGTGTCCATCTGGAGCCCAGCCTCAGAGTCCCCTTTGCCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
CDS-3UTR CCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCTCTCCGGCTCCTGGTaGAGTCTCAGAAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMELSGSW*SLRRPQ
Trigger: CTGGGGTCTTCTGAGACTCCACCAGGAGCCGGAGAG...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGACCTCCTAGCTGGATTTaGCTCCCTGCCCTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGPPSWI*LPALSG
Trigger: GCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGG...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGTCTCAGGGAGGCTCCTaGCTTCTTCCTTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMSQGGS*LLPSVP
Trigger: GGGGACAGAAGGAAGAAGCCAGGAGCCTCCCTGAGA...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCAAGGCAAAGGGGACTCTaGGGCTGGGCTCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSRQRGL*GWAPDG
Trigger: TCCATCTGGAGCCCAGCCTCAGAGTCCCCTTTGCCT...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCCTCAGCACCACTTTCTaGAGCCTGGAGCTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSLSTTF*SLELVV
Trigger: CACCACGAGCTCCAGGCTTCAGAAAGTGGTGCTGAG...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCTGCTGCTGCTGTTTCTaGTGCTGTCGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSCCCCF*CCRCCL
Trigger: CAGGCAGCAGCGACAGCAGCAGAAACAGCAGCAGCA...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAACCTGGGGGCTGCTGCTaGTGTTTCTGCTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: LSPPALSLFLALGRRTFEPGGCC*CFCCCR
Trigger: GCGACAGCAGCAGAAACAGCAGCAGCAGCCCCCAGG...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGCAGTGGCACAATCTCTaGTCTCTTCAACCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGQWHNL*SLQPPP
Trigger: AGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTG...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCGCATCAGATCCACACTaGGGCCACTTAGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSASDPH*GHLGPR
Trigger: CCTTGGCCCTAAGTGGCCCCAGTGTGGATCTGATGC...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGGCATCAGATCCACACTaGGGCCACTTAGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMEASDPH*GHLGPR
Trigger: CCTTGGCCCTAAGTGGCCCCAGTGTGGATCTGATGC...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAATCTGTGGAGGGTCTTaGGGACGTGCCCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGICGGS*GRARLP
Trigger: AGGAAGGCGGGCACGTCCCCAAGACCCTCCACAGAT...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCTGGACACACATCTGTaGAGGGTCTTGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMELDTHL*RVLGTC
Trigger: GCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAG...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCCCGGGGCGTAGGTCATaGCATAGGGGGCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLQCRASVSPKNETYSGFPGRRS*HRGRRS
Trigger: TGACCTCCGCCCCCTATGCCATGACCTACGCCCCGG...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGCCCGATGGAGAGAGATaGAGACTGCGTCCTCTACAA +
Preference number: 4 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGPDGER*RLRPLQ
Trigger: TTGTAGAGGACGCAGTCTCCATCTCTCTCCATCGGG...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGAGGTCCCGAGGCCCGATaGAGAGAGATGGAGACTGCG +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGGPEAR*REMETA
Trigger: CGCAGTCTCCATCTCTCTCCATCGGGCCTCGGGACC...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTAGGTCCCGAGGCCCGATaGAGAGAGATGGAGACTGCG +
Preference number: 4 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLGPEAR*REMETA
Trigger: CGCAGTCTCCATCTCTCTCCATCGGGCCTCGGGACC...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGAAGCCGGGCCTGGTGGTaGGCATCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGSRAWW*ASVVPA
Trigger: AGCTGGGACTACAGATGCCCACCACCAGGCCCGGCT...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTACCTCCTAGCTGGATTTaGCTCCCTGCCCTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLPPSWI*LPALSG
Trigger: GCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGG...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGTCCCCTGTGCACAGCTaGAAGAACCAACACTCAGGA +
Preference number: 4 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGSPVHS*KNQHSG
Trigger: TCCTGAGTGTTGGTTCTTCCAGCTGTGCACAGGGGA...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGCCAGAGGCCAGTGTGTaGGGAAGAGGAGGACAGATA +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMPEASV*GRGGQI
Trigger: TATCTGTCCTCCTCTTCCCCACACACTGGCCTCTGG...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCAGGGACTGTAGGAATCTaGGATGCCCAGAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSGTVGI*DAQRVW
Trigger: CCAGACCCTCTGGGCATCTCAGATTCCTACAGTCCC...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp ATGAAGGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGATGCCCGTGGGGTCCTTaGATTCCAAGCTATCCACGG +
Preference number: 4 (lower is better)
Translates to: MKGSWNPPPHPKMKGELGCPWGP*IPSYPR
Trigger: CCGTGGATAGCTTGGAATTCAAGGACCCCACGGGCA...TCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGCCCACACTGGACTCTTaGGCCACTCCTGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMPTLDS*ATPGLF
Trigger: AAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGG...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCCCCAGCCTCCCCAGTaGCATATGTTGTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMEPQPPQ*HMLSSS
Trigger: AGAGGAAGACAACATATGTCACTGGGGAGGCTGGGG...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTACCTGCCCCTCCCGTGTaGATTTTGTCTAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLPAPPV*ILSSSP
Trigger: GGGGGAGCTAGACAAAATTCACACGGGAGGGGCAGG...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGACCTGCCCCTCCCGTGTaGATTTTGTCTAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGPAPPV*ILSSSP
Trigger: GGGGGAGCTAGACAAAATTCACACGGGAGGGGCAGG...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATTCTCTTCCACGCCTaGGTCCCGGCCTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LSPPALSLFLALGRRTFEILFHA*VPASSA
Trigger: TGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAAT...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCCCCATCAAGTTTCTATaGCTTGTTTGCACAAGACAC +
Preference number: 4 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPPIKFL*LVCTRH
Trigger: GTGTCTTGTGCAAACAAGTCATAGAAACTTGATGGG...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTACAGCTGGTTCGGGTTaGTTTCTCAGGAATGCCATC +
Preference number: 4 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSTAGSG*FLRNAI
Trigger: GATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGT...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCATCAGATCCACACTaGGGCCACTTAGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGASDPH*GHLGPR
Trigger: CCTTGGCCCTAAGTGGCCCCAGTGTGGATCTGATGC...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGCCCGCCGCTGCTTCCTaGGGGCGCTTGGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLPAAAS*GRLGRA
Trigger: TGCCCTACCCAAGCGCCCCCAGGAAGCAGCGGCGGG...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000539067.5
CDS-3UTR CCA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACCAGTGGCCACTGCCGTaGTTGGGGAGCCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHQWPLP*LGSLRG
Trigger: GCCCCTCAGGCTCCCCAACCACGGCAGTGGCCACTG...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGACCAATGAAGGGCTCTTaGAACCCGCCTCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGPMKGS*NPPPHP
Trigger: TGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCATTGG...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp TGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGTGATGGGGGCCCCTTaGCCTTCACTACTTCTCACT +
Preference number: 4 (lower is better)
Translates to: CREADSEEKGSRGPMERDVMGAP*PSLLLT
Trigger: AGTGAGAAGTAGTGAAGGCCAAGGGGCCCCCATCAC...ATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GGAAAAGCAATCTGTAACCTCCTAGCTGGATTTGGCTCCCTGCCCTCTCCGGCTGTGATGGGGGCCCCTTaGCCTTCACTACTTCTCACT +
Preference number: 4 (lower is better)
Translates to: GKAICNLLAGFGSLPSPAVMGAP*PSLLLT
Trigger: AGTGAGAAGTAGTGAAGGCCAAGGGGCCCCCATCAC...AGCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGGTTACAGATTGCTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CCACATCATTGGCCTAAGGTTTCCCGACGGGGCTTCTTAAAGTCTGTCTTTGGACCTCCTAGCTGGATTTaGCTCCCTGCCCTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: PHHWPKVSRRGFLKSVFGPPSWI*LPALSG
Trigger: GCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGG...TCCAAAGACAGACTTTAAGAAGCCCCGTCGGGAAACCTTAGGCCAATGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCCAGAGGCCAGTGTGTaGGGAAGAGGAGGACAGATA +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMEPEASV*GRGGQI
Trigger: TATCTGTCCTCCTCTTCCCCACACACTGGCCTCTGG...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGATTGGTTTCACTCTGTaGGTGGACAGAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGIGFTL*VDREGG
Trigger: TCCCCCTTCTCTGTCCACCCACAGAGTGAAACCAAT...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
3UTR CAA 72 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTaGAGAGAATCACTAGGACCTGTGAGCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLG*RESLGPVSCPR
Trigger: CCTGGGACAGCTCACAGGTCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGTCATATACGCCATCATaGTCTTCGGGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMSYTPS*SSGTLR
Trigger: CCTCAGTGTCCCCGAAGATCATGATGGCGTATATGA...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTTAGGGCCAAGGCGTTaGCAGAATAGTGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GLQCRASVSPKNETYSGFLGPRR*QNSGAP
Trigger: CGGGGCCCCACTATTCTGTCAACGCCTTGGCCCTAA...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTAGGCAAAGGGGACTCTaGGGCTGGGCTCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: LCEIATTIGGTSQAATPVRQRGL*GWAPDG
Trigger: TCCATCTGGAGCCCAGCCTCAGAGTCCCCTTTGCCT...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGGTCAGAGACGGCCCTaGGGCCACCAGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFGQRRP*GHQPSP
Trigger: CGGGCTGGGCTGGTGGCCTCAGGGCCGTCTCTGACC...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCAGGGGTCTAGGCCGCTaGAATAGGAGCTCGGAGACC +
Preference number: 4 (lower is better)
Translates to: GLQCRASVSPKNETYSGFRGLGR*NRSSET
Trigger: GGTCTCCGAGCTCCTATTTCAGCGGCCTAGACCCCT...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGGTGGTCTCTGTAAGCTaGACACCGAGCTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMEVVSVS*TPSCQK
Trigger: CTTCTGACAGCTCGGTGTTCAGCTTACAGAGACCAC...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCATCTCGCCTTTCTCCTaGCCCTGGCTGCTGCTGACG +
Preference number: 4 (lower is better)
Translates to: SPPALSLFLALGRRTFEIISPFS*PWLLLT
Trigger: CGTCAGCAGCAGCCAGGGTCAGGAGAAAGGCGAGAT...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCCCACACTGGACTCTTaGGCCACTCCTGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMEPTLDS*ATPGLF
Trigger: AAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGG...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGACCCCAGCCTCCCCAGTaGCATATGTTGTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGPQPPQ*HMLSSS
Trigger: AGAGGAAGACAACATATGTCACTGGGGAGGCTGGGG...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCTGCCCCTCCCGTGTaGATTTTGTCTAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LCEIATTIGGTSQAATPVPAPPV*ILSSSP
Trigger: GGGGGAGCTAGACAAAATTCACACGGGAGGGGCAGG...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp GCCTCAGGCAAAGGGGACTCTGAGGCTGGGCTCCAGATGGACACAGTGGCCACTCCCATCAAGTTTCTATaGCTTGTTTGCACAAGACAC +
Preference number: 4 (lower is better)
Translates to: ASGKGDSEAGLQMDTVATPIKFL*LVCTRH
Trigger: GTGTCTTGTGCAAACAAGTCATAGAAACTTGATGGG...AGTGGCCACTGTGTCCATCTGGAGCCCAGCCTCAGAGTCCCCTTTGCCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613299.1
CDS-3UTR GCA 90 bp GGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGACTGAGTGTAGGAATCTGAGATaGCCAGAGGGTCTGGACACA +
Preference number: 4 (lower is better)
Translates to: GLLEPASPPKNERRTRTECRNLR*PEGLDT
Trigger: TGTGTCCAGACCCTCTGGGCATCTCAGATTCCTACA...CTCAGTCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGTCCCGGGATCTAAACTaGAGGGAAGCAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGSRDLN*READSE
Trigger: TTCTGAATCTGCTTCCCTGCAGTTTAGATCCCGGGA...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp GGATCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATTCCCAGAACCTTGCATaGATCCTTCAGTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSKLQGSRFRRERVPRPDSQNLA*ILQSLP
Trigger: GGGGAGGGACTGAAGGATGCATGCAAGGTTCTGGGA...ATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGTCCTTCCCAGAACCTTaGATGCATCCTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMSFPEP*MHPSVP
Trigger: AGGGACTGAAGGATGCATGCAAGGTTCTGGGAAGGA...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCCCAATGAAGGGCTCTTaGAACCCGCCTCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GLQCRASVSPKNETYSGFPMKGS*NPPPHP
Trigger: TGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCATTGG...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp GGATCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGTGATGGGGGCCCCTTaGCCTTCACTACTTCTCACT +
Preference number: 4 (lower is better)
Translates to: GSKLQGSRFRRERVPRPDVMGAP*PSLLLT
Trigger: AGTGAGAAGTAGTGAAGGCCAAGGGGCCCCCATCAC...ATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGTTTCACTCTGTGGGTaGACAGAGAAGGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGVSLCG*TEKGDP
Trigger: TGGGTCCCCCTTCTCTGTCCACCCACAGAGTGAAAC...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp TGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATTTCTTGAACCAAACCTaGACCCTGGACTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CREADSEEKGSRGPMERDFLNQT*TLDSGR
Trigger: TCTGCCTGAGTCCAGGGTTCAGGTTTGGTTCAAGAA...ATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000539067.5
CDS-3UTR TCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCGGGACTGTAGGAATCTaGGATGCCCAGAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SPPALSLFLALGRRTFEIGTVGI*DAQRVW
Trigger: CCAGACCCTCTGGGCATCTCAGATTCCTACAGTCCC...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGACCATGGGATTGTAGGTaGATTTCCAGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGPWDCR*ISRCPW
Trigger: CCACGGGCACCTGGAAATTCACCTACAATCCCATGG...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGCTTCTGAGCATCAAATaGCCTCAATCCGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMLLSIK*PQSVFR
Trigger: CCTGAAGACGGATTGAGGTCATTTGATGCTCAGAAG...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp GGAGAACTCGGACTGAGAAGGCAGGGACCCAGCACCCAACTTCTGAGCATCAAATTACACCTTGCCTTGTaGACTCCACCAATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GELGLRRQGPSTQLLSIKLHLAL*TPPMKG
Trigger: GCCCTTCATTGGTGGAGTTCACAAGGCAAGGTGTAA...TTTGATGCTCAGAAGTTGGGTGCTGGGTCCCTGCCTTCTCAGTCCGAGTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGAGCTGGAAACGTCATCTaGTACCTCCCGGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGAGNVI*YLPASL
Trigger: AAGAGAGGCCGGGAGGTATCAGATGACGTTTCCAGC...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp TGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATACACAGCCTCCCCGGTaGATAAGGAGAAGATTCTCT +
Preference number: 4 (lower is better)
Translates to: CREADSEEKGSRGPMERDTQPPR*IRRRFS
Trigger: AGAGAATCTTCTCCTTATTCACCGGGGAGGCTGTGT...ATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTTGCTGCTGCTGTTTCTaGTGCTGTCGCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LCEIATTIGGTSQAATPVCCCCF*CCRCCL
Trigger: CAGGCAGCAGCGACAGCAGCAGAAACAGCAGCAGCA...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGTGTAGGAATCTGAGATaGCCAGAGGGTCTGGACACA +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMECRNLR*PEGLDT
Trigger: TGTGTCCAGACCCTCTGGGCATCTCAGATTCCTACA...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp AACGTTTGCACAGACCCAGGGCACAATATTGTCTCATCCCTGCCCCTCCCGTGTTGTAGGAATCTGAGATaGCCAGAGGGTCTGGACACA +
Preference number: 4 (lower is better)
Translates to: NVCTDPGHNIVSSLPLPCCRNLR*PEGLDT
Trigger: TGTGTCCAGACCCTCTGGGCATCTCAGATTCCTACA...ACACGGGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCACAGCTGGTTCGGGTTaGTTTCTCAGGAATGCCATC +
Preference number: 4 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSTAGSG*FLRNAI
Trigger: GATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGT...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAACAGCGGTCACAATCGTaGCAGACGGTGTTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LSPPALSLFLALGRRTFEQRSQS*QTVLGL
Trigger: CAACCCTAACACCGTCTGGCACGATTGTGACCGCTG...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTACAGCGGTCACAATCGTaGCAGACGGTGTTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLQRSQS*QTVLGL
Trigger: CAACCCTAACACCGTCTGGCACGATTGTGACCGCTG...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTCCCGCCGCTGCTTCCTaGGGGCGCTTGGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCPAAAS*GRLGRA
Trigger: TGCCCTACCCAAGCGCCCCCAGGAAGCAGCGGCGGG...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000539067.5
CDS-3UTR CCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGACTAGCTGGGGCACCATaGGAGAAAGGTAGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGLAGAP*EKGRGL
Trigger: TAGACCCCTACCTTTCTCCCATGGTGCCCCAGCTAG...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GTACCAACTCGTAAGCATATATTGTGCCCTATCTCTTCCCAACTCTTAGTTCAGAGGGAGGTGGGGGACTaGGCCAGGGAAGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: VPTRKHILCPISSQLLVQREVGD*AREGPT
Trigger: CGTGGGACCTTCCCTGGCCCAGTCCCCCACCTCCCT...CTGAACTAAGAGTTGGGAAGAGATAGGGCACAATATATGCTTACGAGTTGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp AACGTTTGCACAGACCCAGGGCACAATATTGTCTCATCCCTGCCCCTCCCGTGTAGCCACAACTATAGGTaGTACGTCCCAAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: NVCTDPGHNIVSSLPLPCSHNYR*YVPSSY
Trigger: GTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCT...ACACGGGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCATCCCCTGTGCACAGCTaGAAGAACCAACACTCAGGA +
Preference number: 4 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSSPVHS*KNQHSG
Trigger: TCCTGAGTGTTGGTTCTTCCAGCTGTGCACAGGGGA...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR CAA 72 bp ACACCTTGCCTTGTGAACTCCACCAATGAAGGGCTCTaGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TPCLVNSTNEGL*EPASPPKNERR
Trigger: TCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCATTGGTGGAGTTCACAAGGCAAGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR CAA 72 bp CCACAACCAACCTTTTCCTCTTCCTTGGAGAGCCCATaGTTAGACCTCTGCCAGCACACCACTGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PQPTFSSSLESP*LDLCQHTTVFL
Trigger: CAGGAAGACAGTGGTGTGCTGGCAGAGGTCTAACAATGGGCTCTCCAAGGAAGAGGAAAAGGTTGGTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCATCATATACGCCATCATaGTCTTCGGGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSSYTPS*SSGTLR
Trigger: CCTCAGTGTCCCCGAAGATCATGATGGCGTATATGA...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCATGGGATTGTAGGTaGATTTCCAGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LCEIATTIGGTSQAATPVPWDCR*ISRCPW
Trigger: CCACGGGCACCTGGAAATTCACCTACAATCCCATGG...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCCCATGGGATTGTAGGTaGATTTCCAGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GLQCRASVSPKNETYSGFPWDCR*ISRCPW
Trigger: CCACGGGCACCTGGAAATTCACCTACAATCCCATGG...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAGTGGTCTCTGTAAGCTaGACACCGAGCTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSPPALSLFLALGRRTFEVVSVS*TPSCQK
Trigger: CTTCTGACAGCTCGGTGTTCAGCTTACAGAGACCAC...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GGAAAAGCAATCTGTAACCTCCTAGCTGGATTTGGCTCCCTGCCCTCTCCGGCTCCAGCACCCAACTTCTaGGCATCAAATGACCTCAAT +
Preference number: 4 (lower is better)
Translates to: GKAICNLLAGFGSLPSPAPAPNF*ASNDLN
Trigger: ATTGAGGTCATTTGATGCTCAGAAGTTGGGTGCTGG...AGCCGGAGAGGGCAGGGAGCCAAATCCAGCTAGGAGGTTACAGATTGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTGCTGGAAACGTCATCTaGTACCTCCCGGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LCEIATTIGGTSQAATPVAGNVI*YLPASL
Trigger: AAGAGAGGCCGGGAGGTATCAGATGACGTTTCCAGC...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTATCCCAGAACCCAGCATaGCTCAGGCCTATGAGAGAT +
Preference number: 4 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLSQNPA*LRPMRD
Trigger: ATCTCTCATAGGCCTGAGTCATGCTGGGTTCTGGGA...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CCTCCGGTTGCTAGCTTGAAGTCAGCCGTGGTGGGAGTATTTACACCACGGAAAACACAGCCTCCCCGGTaGATAAGGAGAAGATTCTCT +
Preference number: 4 (lower is better)
Translates to: PPVASLKSAVVGVFTPRKTQPPR*IRRRFS
Trigger: AGAGAATCTTCTCCTTATTCACCGGGGAGGCTGTGT...TTTCCGTGGTGTAAATACTCCCACCACGGCTGACTTCAAGCTAGCAACCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAACACAGCCTCCCCGGTaGATAAGGAGAAGATTCTCT +
Preference number: 4 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGTQPPR*IRRRFS
Trigger: AGAGAATCTTCTCCTTATTCACCGGGGAGGCTGTGT...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGATCTGGTCCCAACGTTTaGACAGACCCAGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGSGPNV*TDPGHN
Trigger: ATTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGA...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCCTAGCTGGGGCACCATaGGAGAAAGGTAGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: GLQCRASVSPKNETYSGFLAGAP*EKGRGL
Trigger: TAGACCCCTACCTTTCTCCCATGGTGCCCCAGCTAG...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTGCCGGGCCCCCTAGCTaGGGCACCATGGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCAGPPS*GTMGER
Trigger: CCTTTCTCCCATGGTGCCCCAGCTAGGGGGCCCGGC...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTAGGGAGGTGGGGGACTaGGCCAGGGAAGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFREVGD*AREGPT
Trigger: CGTGGGACCTTCCCTGGCCCAGTCCCCCACCTCCCT...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCGAAGCCTGGAGCTCGTaGTGTACTTCAGCGGTCACA +
Preference number: 4 (lower is better)
Translates to: SPPALSLFLALGRRTFEIEAWSS*CTSAVT
Trigger: TGTGACCGCTGAAGTACACCACGAGCTCCAGGCTTC...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCATGTGTGCACCTCTTCTaGTCTAGTGCTGGAAACGTC +
Preference number: 4 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSCVHLF*SSAGNV
Trigger: GACGTTTCCAGCACTAGACCAGAAGAGGTGCACACA...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGATAAAAACCTCTTTGTaGGCTCTAGAGATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGIKTSL*ALEIRV
Trigger: CACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTAT...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCAGAGGCCAGTGTGTaGGGAAGAGGAGGACAGATA +
Preference number: 4 (lower is better)
Translates to: LCEIATTIGGTSQAATPVPEASV*GRGGQI
Trigger: TATCTGTCCTCCTCTTCCCCACACACTGGCCTCTGG...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp CCTCCGGTTGCTAGCTTGAAGTCAGCCGTGGTGGGAGTATTTACACCACGGAAAATTGGTTTCACTCTGTaGGTGGACAGAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PPVASLKSAVVGVFTPRKIGFTL*VDREGG
Trigger: TCCCCCTTCTCTGTCCACCCACAGAGTGAAACCAAT...TTTCCGTGGTGTAAATACTCCCACCACGGCTGACTTCAAGCTAGCAACCGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp ATGAAGGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGATTCTTGAACCAAACTTaGGTAGGGCACAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: MKGSWNPPPHPKMKGELGFLNQT*VGHSLV
Trigger: CACCAGGCTGTGCCCTACCCAAGTTTGGTTCAAGAA...TCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613299.1
CDS-3UTR TCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTGATCTTCGGGGACACTaGGGCCCAAGTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCDLRGH*GPSQGA
Trigger: GGCCCCCTGACTTGGGCCTCAGTGTCCCCGAAGATC...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGACTCAGGCAGATTaGTCTTCAGAGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: GLQCRASVSPKNETYSGFWTQAD*SSEPPP
Trigger: AGGAGGTGGCTCTGAAGATCAATCTGCCTGAGTCCA...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000539067.5
CDS-3UTR TCA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAATTCTTGAACCAAACCTaGACCCTGGACTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LSPPALSLFLALGRRTFEFLNQT*TLDSGR
Trigger: TCTGCCTGAGTCCAGGGTTCAGGTTTGGTTCAAGAA...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000539067.5
CDS-3UTR TCA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTGTGGTCTCTGTAAGCTaGACACCGAGCTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LCEIATTIGGTSQAATPVVVSVS*TPSCQK
Trigger: CTTCTGACAGCTCGGTGTTCAGCTTACAGAGACCAC...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAAGGGAATGTATGTTTaGAATGTAGGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMEKGMYV*NVGLPP
Trigger: AGGAGGCAGCCCTACATTTCAAACATACATTCCCTT...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCAAGGGAATGTATGTTTaGAATGTAGGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSKGMYV*NVGLPP
Trigger: AGGAGGCAGCCCTACATTTCAAACATACATTCCCTT...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTCTTCCTGGGGGCGCTTaGGTAGGGCACAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFLPGGA*VGHSLV
Trigger: CACCAGGCTGTGCCCTACCCAAGCGCCCCCAGGAAG...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000539067.5
CDS-3UTR CCA 90 bp ATGTTGAATAAAAACCTCTTTGTGGGCTCTAGAGATCAGGGTGTACCCCTCAGGCTGGACACACATCTGTaGAGGGTCTTGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: MLNKNLFVGSRDQGVPLRLDTHL*RVLGTC
Trigger: GCACGTCCCCAAGACCCTCCACAGATGTGTGTCCAG...CCTGAGGGGTACACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTATTCAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTCCGGGGCGTAGGTCATaGCATAGGGGGCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFPGRRS*HRGRRS
Trigger: TGACCTCCGCCCCCTATGCCATGACCTACGCCCCGG...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CCACATCATTGGCCTAAGGTTTCCCGACGGGGCTTCTTAAAGTCTGTCTTTGGACCCGATGGAGAGAGATaGAGACTGCGTCCTCTACAA +
Preference number: 4 (lower is better)
Translates to: PHHWPKVSRRGFLKSVFGPDGER*RLRPLQ
Trigger: TTGTAGAGGACGCAGTCTCCATCTCTCTCCATCGGG...TCCAAAGACAGACTTTAAGAAGCCCCGTCGGGAAACCTTAGGCCAATGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGCTCTCCGGCTCCTGGTaGAGTCTCAGAAGACCCCAG +
Preference number: 4 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLLSGSW*SLRRPQ
Trigger: CTGGGGTCTTCTGAGACTCCACCAGGAGCCGGAGAG...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTTACACCTTGCCTTGTaGACTCCACCAATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GLQCRASVSPKNETYSGFLHLAL*TPPMKG
Trigger: GCCCTTCATTGGTGGAGTTCACAAGGCAAGGTGTAA...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCCATGACTCAGGCCTATaGGAGATGAACACGTTTTAT +
Preference number: 4 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSHDSGL*EMNTFY
Trigger: ATAAAACGTGTTCATCTCTCATAGGCCTGAGTCATG...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTCCCCCTGGGGGCTGCTaGTGCTGTTTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFPPGGC*CCFCCC
Trigger: ACAGCAGCAGAAACAGCAGCAGCAGCCCCCAGGGGG...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTAGGGTCTTGGGGACGTaGCCGCCTTCCTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFRVLGT*PPSSWQ
Trigger: CTGCCAAGAGGAAGGCGGGCACGTCCCCAAGACCCT...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGATCCCGGGATCTAAACTaGAGGGAAGCAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGSRDLN*READSE
Trigger: TTCTGAATCTGCTTCCCTGCAGTTTAGATCCCGGGA...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp CCACATCATTGGCCTAAGGTTTCCCGACGGGGCTTCTTAAAGTCTGTCTTTGGAACAGCTGGTTCGGGTTaGTTTCTCAGGAATGCCATC +
Preference number: 4 (lower is better)
Translates to: PHHWPKVSRRGFLKSVFGTAGSG*FLRNAI
Trigger: GATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGT...TCCAAAGACAGACTTTAAGAAGCCCCGTCGGGAAACCTTAGGCCAATGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCATTGTTAGACCTCTaGCAGCACACCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LCEIATTIGGTSQAATPVPLLDL*QHTTVF
Trigger: GAAGACAGTGGTGTGCTGGCAGAGGTCTAACAATGG...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp ATGAAGGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGAATATTGTCTCATCCCTaGCCCTCCCGTGTGAATTTT +
Preference number: 4 (lower is better)
Translates to: MKGSWNPPPHPKMKGELGILSHP*PSRVNF
Trigger: AAAATTCACACGGGAGGGGCAGGGATGAGACAATAT...TCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCTGTCAGAAGGACAGCTaGTTCGGGTTGCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SPPALSLFLALGRRTFEICQKDS*FGLLSQ
Trigger: CTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACA...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp CTCTGTGAAATAGCCACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTTGTCAGAAGGACAGCTaGTTCGGGTTGCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LCEIATTIGGTSQAATPVCQKDS*FGLLSQ
Trigger: CTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACA...AACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCTATTTCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCCCACTTTCTGAAGCCTaGAGCTCGTGGTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: SPPALSLFLALGRRTFEIPLSEA*SSWCTS
Trigger: TGAAGTACACCACGAGCTCCAGGCTTCAGAAAGTGG...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp ATGAAGGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGAGGTTTGACTTCTTCTTaGAGCAAGTTCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: MKGSWNPPPHPKMKGELGGLTSS*SKFSAP
Trigger: TGGTGCTGAGAACTTGCTCCAAGAAGAAGTCAAACC...TCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp CCACATCATTGGCCTAAGGTTTCCCGACGGGGCTTCTTAAAGTCTGTCTTTGGAAGCCACAACTATAGGTaGTACGTCCCAAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PHHWPKVSRRGFLKSVFGSHNYR*YVPSSY
Trigger: GTAGCTGCTTGGGACGTACCACCTATAGTTGTGGCT...TCCAAAGACAGACTTTAAGAAGCCCCGTCGGGAAACCTTAGGCCAATGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCATAAAAACCTCTTTGTaGGCTCTAGAGATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSIKTSL*ALEIRV
Trigger: CACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTAT...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp ATGTTGAATAAAAACCTCTTTGTGGGCTCTAGAGATCAGGGTGTACCCCTCAGGGTTTCACTCTGTGGGTaGACAGAGAAGGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: MLNKNLFVGSRDQGVPLRVSLCG*TEKGDP
Trigger: TGGGTCCCCCTTCTCTGTCCACCCACAGAGTGAAAC...CCTGAGGGGTACACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTATTCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTTTAGGGCCAAGGCGTTaGCAGAATAGTGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFLGPRR*QNSGAP
Trigger: CGGGGCCCCACTATTCTGTCAACGCCTTGGCCCTAA...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACTGGACTCAGGCAGATTaGTCTTCAGAGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHWTQAD*SSEPPP
Trigger: AGGAGGTGGCTCTGAAGATCAATCTGCCTGAGTCCA...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000539067.5
CDS-3UTR TCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTATCTCGCCTTTCTCCTaGCCCTGGCTGCTGCTGACG +
Preference number: 4 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCISPFS*PWLLLT
Trigger: CGTCAGCAGCAGCCAGGGTCAGGAGAAAGGCGAGAT...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCAGGCCTATGAGAGATaGACACGTTTTATGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LNCREADSEEKGSRGPMEQAYER*TRFMLN
Trigger: ATTCAACATAAAACGTGTTCATCTCTCATAGGCCTG...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp TGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATCAGGCCTATGAGAGATaGACACGTTTTATGTTGAAT +
Preference number: 4 (lower is better)
Translates to: CREADSEEKGSRGPMERDQAYER*TRFMLN
Trigger: ATTCAACATAAAACGTGTTCATCTCTCATAGGCCTG...ATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp AGATGGAACAGGCAAGGTGCCTTTCATTTCCCTACCAAATACACACATTCCCAACCCCAGCCTCCCCAGTaGCATATGTTGTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RWNRQGAFHFPTKYTHSQPQPPQ*HMLSSS
Trigger: AGAGGAAGACAACATATGTCACTGGGGAGGCTGGGG...TTGGGAATGTGTGTATTTGGTAGGGAAATGAAAGGCACCTTGCCTGTTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp GGATCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATCGTAAGCATATATTGTaGCCTATCTCTTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: GSKLQGSRFRRERVPRPDRKHIL*PISSQL
Trigger: GAGTTGGGAAGAGATAGGGCACAATATATGCTTACG...ATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGAATATTGTCTCATCCCTaGCCCTCCCGTGTGAATTTT +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGILSHP*PSRVNF
Trigger: AAAATTCACACGGGAGGGGCAGGGATGAGACAATAT...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACTCTGGTCCCAACGTTTaGACAGACCCAGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHSGPNV*TDPGHN
Trigger: ATTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGA...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp AGATGGAACAGGCAAGGTGCCTTTCATTTCCCTACCAAATACACACATTCCCAATCCCAGAACCTTGCATaGATCCTTCAGTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RWNRQGAFHFPTKYTHSQSQNLA*ILQSLP
Trigger: GGGGAGGGACTGAAGGATGCATGCAAGGTTCTGGGA...TTGGGAATGTGTGTATTTGGTAGGGAAATGAAAGGCACCTTGCCTGTTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGTCCCAGAACCTTGCATaGATCCTTCAGTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLSQNLA*ILQSLP
Trigger: GGGGAGGGACTGAAGGATGCATGCAAGGTTCTGGGA...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTTGCCCGTGGGGTCCTTaGATTCCAAGCTATCCACGG +
Preference number: 4 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCCPWGP*IPSYPR
Trigger: CCGTGGATAGCTTGGAATTCAAGGACCCCACGGGCA...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGACATGACTCAGGCCTATaGGAGATGAACACGTTTTAT +
Preference number: 4 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGHDSGL*EMNTFY
Trigger: ATAAAACGTGTTCATCTCTCATAGGCCTGAGTCATG...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp AGATGGAACAGGCAAGGTGCCTTTCATTTCCCTACCAAATACACACATTCCCAACAGTGGCACAATCTCTaGTCTCTTCAACCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: RWNRQGAFHFPTKYTHSQQWHNL*SLQPPP
Trigger: AGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTG...TTGGGAATGTGTGTATTTGGTAGGGAAATGAAAGGCACCTTGCCTGTTCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp ATGTTGAATAAAAACCTCTTTGTGGGCTCTAGAGATCAGGGTGTACCCCTCAGGTGTCAGAAGGACAGCTaGTTCGGGTTGCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: MLNKNLFVGSRDQGVPLRCQKDS*FGLLSQ
Trigger: CTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACA...CCTGAGGGGTACACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTATTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGAAAATTCTGTCCACGTaGAAAGTTAAGTTATCAAGC +
Preference number: 4 (lower is better)
Translates to: AGKQIQKRKGPEARWREMKILST*KVKLSS
Trigger: GCTTGATAACTTAACTTTCCACGTGGACAGAATTTT...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GTACCAACTCGTAAGCATATATTGTGCCCTATCTCTTCCCAACTCTTAGTTCAGGTTTCACTCTGTGGGTaGACAGAGAAGGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: VPTRKHILCPISSQLLVQVSLCG*TEKGDP
Trigger: TGGGTCCCCCTTCTCTGTCCACCCACAGAGTGAAAC...CTGAACTAAGAGTTGGGAAGAGATAGGGCACAATATATGCTTACGAGTTGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTTGTGAACTCCACCAATaGAGGGCTCTTGGAACCCGC +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFCELHQ*RALGTR
Trigger: GCGGGTTCCAAGAGCCCTTCATTGGTGGAGTTCACA...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR TCA 90 bp GTACCAACTCGTAAGCATATATTGTGCCCTATCTCTTCCCAACTCTTAGTTCAGCCCACACTGGACTCTTaGGCCACTCCTGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: VPTRKHILCPISSQLLVQPTLDS*ATPGLF
Trigger: AAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGG...CTGAACTAAGAGTTGGGAAGAGATAGGGCACAATATATGCTTACGAGTTGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCCGTAAGCATATATTGTaGCCTATCTCTTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: SPPALSLFLALGRRTFEIRKHIL*PISSQL
Trigger: GAGTTGGGAAGAGATAGGGCACAATATATGCTTACG...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CCA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGATTGGTTTCACTCTGTaGGTGGACAGAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLIGFTL*VDREGG
Trigger: TCCCCCTTCTCTGTCCACCCACAGAGTGAAACCAAT...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR TCA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGCTTCTGAGCATCAAATaGCCTCAATCCGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLLLSIK*PQSVFR
Trigger: CCTGAAGACGGATTGAGGTCATTTGATGCTCAGAAG...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTTCTGGTCCCAACGTTTaGACAGACCCAGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFSGPNV*TDPGHN
Trigger: ATTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGA...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR GCA 90 bp GTACCAACTCGTAAGCATATATTGTGCCCTATCTCTTCCCAACTCTTAGTTCAGTCCTTCCCAGAACCTTaGATGCATCCTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: VPTRKHILCPISSQLLVQSFPEP*MHPSVP
Trigger: AGGGACTGAAGGATGCATGCAAGGTTCTGGGAAGGA...CTGAACTAAGAGTTGGGAAGAGATAGGGCACAATATATGCTTACGAGTTGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp CTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTCCATTGTTAGACCTCTaGCAGCACACCACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LFIFSSHTGLLSHSWVIFPLLDL*QHTTVF
Trigger: GAAGACAGTGGTGTGCTGGCAGAGGTCTAACAATGG...AAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR GCA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGATATTGTCTCATCCCTaGCCCTCCCGTGTGAATTTT +
Preference number: 4 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLILSHP*PSRVNF
Trigger: AAAATTCACACGGGAGGGGCAGGGATGAGACAATAT...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGGTTATTTTTGTCCACTTTCTGAAGCCTaGAGCTCGTGGTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: VYIFIPHWTLEPLLGYFCPLSEA*SSWCTS
Trigger: TGAAGTACACCACGAGCTCCAGGCTTCAGAAAGTGG...ACAAAAATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp AGATGGAACAGGCAAGGTGCCTTTCATTTCCCTACCAAATACACACATTCCCAAGGTTTGACTTCTTCTTaGAGCAAGTTCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: RWNRQGAFHFPTKYTHSQGLTSS*SKFSAP
Trigger: TGGTGCTGAGAACTTGCTCCAAGAAGAAGTCAAACC...TTGGGAATGTGTGTATTTGGTAGGGAAATGAAAGGCACCTTGCCTGTTCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
3UTR CAA 72 bp AAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTaGCACAGACCCAGGGCACAATATTGTCTCATCCCT +
Preference number: 4 (lower is better)
Translates to: KNETYSGFWSQR*HRPRAQYCLIP
Trigger: AGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp TCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAATCAAAATTCTGTCCACGTaGAAAGTTAAGTTATCAAGC +
Preference number: 4 (lower is better)
Translates to: SPPALSLFLALGRRTFEIKILST*KVKLSS
Trigger: GCTTGATAACTTAACTTTCCACGTGGACAGAATTTT...GATTTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CCA 90 bp GTACCAACTCGTAAGCATATATTGTGCCCTATCTCTTCCCAACTCTTAGTTCAGAAAATTCTGTCCACGTaGAAAGTTAAGTTATCAAGC +
Preference number: 4 (lower is better)
Translates to: VPTRKHILCPISSQLLVQKILST*KVKLSS
Trigger: GCTTGATAACTTAACTTTCCACGTGGACAGAATTTT...CTGAACTAAGAGTTGGGAAGAGATAGGGCACAATATATGCTTACGAGTTGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp GCCTCAGGCAAAGGGGACTCTGAGGCTGGGCTCCAGATGGACACAGTGGCCACTTGGCCACTGCCGTGGTaGGGGAGCCTGAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: ASGKGDSEAGLQMDTVATWPLPW*GSLRGR
Trigger: CCGGCCCCTCAGGCTCCCCAACCACGGCAGTGGCCA...AGTGGCCACTGTGTCCATCTGGAGCCCAGCCTCAGAGTCCCCTTTGCCTGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613299.1
CDS TCA 90 bp AGAGGGAGGGGCCGTCTGACCCTCGGCGACCAGTCCAGAGGCTCCTaGTGGGAGAATCCAGTCCTGGAACAGACCCCCTGGCCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RGRGRLTLGDQSRGS*WENPVLEQTPWPCS
Trigger: GCTGCAGGGCCAGGGGGTCTGTTCCAGGACTGGATTCTCCCATCAGGAGCCTCTGGACTGGTCGCCGAGGGTCAGACGGCCCCTCCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566686.5
CDS-3UTR CAA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGTGGCCACTGCCGTGGTaGGGGAGCCTGAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: AGKQIQKRKGPEARWREMWPLPW*GSLRGR
Trigger: CCGGCCCCTCAGGCTCCCCAACCACGGCAGTGGCCA...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGACCAATGAAGGGCTCTaGGAACCCGCCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPTNEGL*EPASPP
Trigger: GGGTGGGGAGGCGGGTTCCAAGAGCCCTTCATTGGT...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp TGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGCTTCCTGGGGGCGCTaGGGTAGGGCACAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: CREADSEEKGSRGPMERDASWGR*GRAQPG
Trigger: ACCAGGCTGTGCCCTACCCAAGCGCCCCCAGGAAGC...ATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000539067.5
CDS-3UTR CAA 90 bp GATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTCCGGTGCCCGTGGGGTCCTaGAATTCCAAGCTATCCACG +
Preference number: 5 (lower is better)
Translates to: DSLPRLSPGLQCRASVSPVPVGS*NSKLST
Trigger: CGTGGATAGCTTGGAATTCAAGGACCCCACGGGCAC...CGGAGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTACCAATGAAGGGCTCTaGGAACCCGCCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSTNEGL*EPASPP
Trigger: GGGTGGGGAGGCGGGTTCCAAGAGCCCTTCATTGGT...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCAGCTTCCTGGGGGCGCTaGGGTAGGGCACAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSASWGR*GRAQPG
Trigger: ACCAGGCTGTGCCCTACCCAAGCGCCCCCAGGAAGC...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221996.12
CDS-3UTR CAA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCTCCCACACTGGACTCTaGAGCCACTCCTGGGTTATT +
Preference number: 5 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPSHTGL*SHSWVI
Trigger: AATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGA...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS CCA 90 bp GGAGATTTTAAGCCTGGGCCGGGAGTGATGTCATTTGTCATGGCCTaGAACTCGGAGGGTAATCCCGGCCAAGGTGGGGGACTCGACTGG +
Preference number: 5 (lower is better)
Translates to: GDFKPGPGVMSFVMA*NSEGNPGQGGGLDW
Trigger: CCAGTCGAGTCCCCCACCTTGGCCGGGATTACCCTCCGAGTTCCAGGCCATGACAAATGACATCACTCCCGGCCCAGGCTTAAAATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604324.1
CDS-3UTR CAA 90 bp AGAGCACAGTGGCACAATCTCTGCTCTCTTCAACCTCCGCCTCCCGGGTTCCAGGTGCCCGTGGGGTCCTaGAATTCCAAGCTATCCACG +
Preference number: 5 (lower is better)
Translates to: RAQWHNLCSLQPPPPGFQVPVGS*NSKLST
Trigger: CGTGGATAGCTTGGAATTCAAGGACCCCACGGGCAC...CTGGAACCCGGGAGGCGGAGGTTGAAGAGAGCAGAGATTGTGCCACTGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTTGTGATGGGGGCCCCTaGGCCTTCACTACTTCTCAC +
Preference number: 5 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSCDGGP*AFTTSH
Trigger: GTGAGAAGTAGTGAAGGCCAAGGGGCCCCCATCACA...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTACATCTGTGGAGGGTCTaGGGGACGTGCCCGCCTTCC +
Preference number: 5 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLHLWRV*GTCPPS
Trigger: GGAAGGCGGGCACGTCCCCAAGACCCTCCACAGATG...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACTGGCCACTGCCGTGGTaGGGGAGCCTGAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHWPLPW*GSLRGR
Trigger: CCGGCCCCTCAGGCTCCCCAACCACGGCAGTGGCCA...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp AAGACCCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGTCCTTGGAGAGCCCATaGTTAGACCTCTGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: KTPGSGSLEVLPHRPVMGSLESP*LDLCQH
Trigger: GTGCTGGCAGAGGTCTAACAATGGGCTCTCCAAGGA...CCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp GAAGATTCTCTTCCACGCCTGAGTCCCGGCCTCCAGTGCAGAGCTTCCGTGTCTTTCTGGTCCCAACGTTaGCACAGACCCAGGGCACAA +
Preference number: 5 (lower is better)
Translates to: EDSLPRLSPGLQCRASVSFWSQR*HRPRAQ
Trigger: TTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGAA...AGACACGGAAGCTCTGCACTGGAGGCCGGGACTCAGGCGTGGAAGAGAATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp CCCAGGATCAGGCTCTCTCGAAGTCTTACCCCATCGGCCTGTGATGGGGGCCCCGTTTCTATGACTTGTTaGCACAAGACACAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: PRIRLSRSLTPSACDGGPVSMTC*HKTQPP
Trigger: GGGAGGCTGTGTCTTGTGCAAACAAGTCATAGAAAC...GGGGCCCCCATCACAGGCCGATGGGGTAAGACTTCGAGAGAGCCTGATCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp GGAGAACTCGGACTGAGAAGGCAGGGACCCAGCACCCAACTTCTGAGCATCAAAACCCAGGGCACAATATaGTCTCATCCCTGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: GELGLRRQGPSTQLLSIKTQGTI*SHPCPS
Trigger: GGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGT...TTTGATGCTCAGAAGTTGGGTGCTGGGTCCCTGCCTTCTCAGTCCGAGTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGTGTGATGGGGGCCCCTaGGCCTTCACTACTTCTCAC +
Preference number: 5 (lower is better)
Translates to: LNCREADSEEKGSRGPMECDGGP*AFTTSH
Trigger: GTGAGAAGTAGTGAAGGCCAAGGGGCCCCCATCACA...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS GCA 90 bp CTCAGCCTCCATGTCCTTCTGTTCCTGTCTGTCTGTCCCTCCCTTTaGTGTCTTTCTGCCTGTCCACCTGTCCCTGTAACTCCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LSLHVLLFLSVCPSL*CLSACPPVPVTPAS
Trigger: TGAGGCTGGAGTTACAGGGACAGGTGGACAGGCAGAAAGACAGCAAAGGGAGGGACAGACAGACAGGAACAGAAGGACATGGAGGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604324.1
CDS-3UTR CAA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCTGGACTCAGGCAGATaGATCTTCAGAGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LNCREADSEEKGSRGPMELDSGR*IFRATS
Trigger: GGAGGTGGCTCTGAAGATCAATCTGCCTGAGTCCAG...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000539067.5
CDS-3UTR CAA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAACCCAGGGCACAATATaGTCTCATCCCTGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGTQGTI*SHPCPS
Trigger: GGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGT...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCTCCTTCCCAGAACCTaGCATGCATCCTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LNCREADSEEKGSRGPMELLPRT*HASFSP
Trigger: GGGACTGAAGGATGCATGCAAGGTTCTGGGAAGGAG...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS CCA 90 bp AGAGCGGCCAGACAGCAGAGGCTGAAGGAAACACATCCCCTCACATaGGGAGATTTTAAGCCTGGGCCGGGAGTGATGTCATTTGTCATG +
Preference number: 5 (lower is better)
Translates to: RAARQQRLKETHPLT*GDFKPGPGVMSFVM
Trigger: CATGACAAATGACATCACTCCCGGCCCAGGCTTAAAATCTCCCCATGTGAGGGGATGTGTTTCCTTCAGCCTCTGCTGTCTGGCCGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604324.1
CDS-3UTR CAA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACTGGACTCAGGCAGATaGATCTTCAGAGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSLDSGR*IFRATS
Trigger: GGAGGTGGCTCTGAAGATCAATCTGCCTGAGTCCAG...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221996.12
CDS-3UTR CAA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGATCCTTGGAGAGCCCATaGTTAGACCTCTGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGSLESP*LDLCQH
Trigger: GTGCTGGCAGAGGTCTAACAATGGGCTCTCCAAGGA...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTAACCCAGGGCACAATATaGTCTCATCCCTGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLTQGTI*SHPCPS
Trigger: GGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGT...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCATTCTGGTCCCAACGTTaGCACAGACCCAGGGCACAA +
Preference number: 5 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSFWSQR*HRPRAQ
Trigger: TTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGAA...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCAGACAGCTGGTTCGGGTaGCTTTCTCAGGAATGCCAT +
Preference number: 5 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSDSWFG*LSQECH
Trigger: ATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTC...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp CTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGCAGACGGTGTTAGGGTaGAGAGAATCACTAGGACCT +
Preference number: 5 (lower is better)
Translates to: LNCREADSEEKGSRGPMEQTVLG*RESLGP
Trigger: AGGTCCTAGTGATTCTCTCAACCCTAACACCGTCTG...CTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp CACAACTATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCATCCCACACTGGACTCTaGAGCCACTCCTGGGTTATT +
Preference number: 5 (lower is better)
Translates to: HNYRWYVPSSYPSSTSVSSHTGL*SHSWVI
Trigger: AATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGA...TGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp TCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGATTAGCCCTCCGGTTCTaGAACCAAACTTGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: SKLQGSRFRRERVPRPDGLALRF*NQTWVG
Trigger: CCCTACCCAAGTTTGGTTCAAGAACCGGAGGGCTAA...TCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
CDS-3UTR CAA 90 bp CCTCCGGTTGCTAGCTTGAAGTCAGCCGTGGTGGGAGTATTTACACCACGGAAACAGACGGTGTTAGGGTaGAGAGAATCACTAGGACCT +
Preference number: 5 (lower is better)
Translates to: PPVASLKSAVVGVFTPRKQTVLG*RESLGP
Trigger: AGGTCCTAGTGATTCTCTCAACCCTAACACCGTCTG...TTTCCGTGGTGTAAATACTCCCACCACGGCTGACTTCAAGCTAGCAACCGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp CTTCAGCGGTCACAATCGTGCCAGACGGTGTTAGGGTTGAGAGAATCACTAGGATCCCACACTGGACTCTaGAGCCACTCCTGGGTTATT +
Preference number: 5 (lower is better)
Translates to: LQRSQSCQTVLGLRESLGSHTGL*SHSWVI
Trigger: AATAACCCAGGAGTGGCTCAAGAGTCCAGTGTGGGA...TCCTAGTGATTCTCTCAACCCTAACACCGTCTGGCACGATTGTGACCGCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp CCACATCATTGGCCTAAGGTTTCCCGACGGGGCTTCTTAAAGTCTGTCTTTGGAGACAGCTGGTTCGGGTaGCTTTCTCAGGAATGCCAT +
Preference number: 5 (lower is better)
Translates to: PHHWPKVSRRGFLKSVFGDSWFG*LSQECH
Trigger: ATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTC...TCCAAAGACAGACTTTAAGAAGCCCCGTCGGGAAACCTTAGGCCAATGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp GCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGGAGAGAGATGTATGAATGTAGATCTTaGTCTCTCAAACGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: AGKQIQKRKGPEARWREMYECRS*SLKRSP
Trigger: AGGGGACCGTTTGAGAGACAAAGATCTACATTCATA...CATCTCTCTCCATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp GGATCTAAACTGCAGGGAAGCAGATTCAGAAGAGAAAGGGTCCCGAGGCCCGATGTTTCTATGACTTGTTaGCACAAGACACAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: GSKLQGSRFRRERVPRPDVSMTC*HKTQPP
Trigger: GGGAGGCTGTGTCTTGTGCAAACAAGTCATAGAAAC...ATCGGGCCTCGGGACCCTTTCTCTTCTGAATCTGCTTCCCTGCAGTTTAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp ACCGAGCTGTCAGAAGGACAGCTGGTTCGGGTTGCTTTCTCAGGAATGCCATCCCCCTCTTCCTATCTCTaGTTTATTTACAGATGGGAG +
Preference number: 5 (lower is better)
Translates to: TELSEGQLVRVAFSGMPSPSSYL*FIYRWE
Trigger: CTCCCATCTGTAAATAAACAAGAGATAGGAAGAGGG...GGATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTCCTTCTGACAGCTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACTTCTGGTCCCAACGTTaGCACAGACCCAGGGCACAA +
Preference number: 5 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHFWSQR*HRPRAQ
Trigger: TTGTGCCCTGGGTCTGTGCAAACGTTGGGACCAGAA...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp CTGTCCCCACCTGCCTTGTCACTCTTCCTGGCTTTAGGACGTAGAACGTTTGAAGTTTCTATGACTTGTTaGCACAAGACACAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LSPPALSLFLALGRRTFEVSMTC*HKTQPP
Trigger: GGGAGGCTGTGTCTTGTGCAAACAAGTCATAGAAAC...TTCAAACGTTCTACGTCCTAAAGCCAGGAAGAGTGACAAGGCAGGTGGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp AACGTTTGCACAGACCCAGGGCACAATATTGTCTCATCCCTGCCCCTCCCGTGTTCAAGTTTCTATGACTaGTTTGCACAAGACACAGCC +
Preference number: 5 (lower is better)
Translates to: NVCTDPGHNIVSSLPLPCSSFYD*FAQDTA
Trigger: GGCTGTGTCTTGTGCAAACAAGTCATAGAAACTTGA...ACACGGGAGGGGCAGGGATGAGACAATATTGTGCCCTGGGTCTGTGCAAACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACCTCCTTCCCAGAACCTaGCATGCATCCTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHLLPRT*HASFSP
Trigger: GGGACTGAAGGATGCATGCAAGGTTCTGGGAAGGAG...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGTGTGATGGGGGCCCCTaGGCCTTCACTACTTCTCAC +
Preference number: 5 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLCDGGP*AFTTSH
Trigger: GTGAGAAGTAGTGAAGGCCAAGGGGCCCCCATCACA...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp ATGAAGGGCTCTTGGAACCCGCCTCCCCACCCAAAAATGAAAGGAGAACTCGGACCCTCTTCCTATCTCTaGTTTATTTACAGATGGGAG +
Preference number: 5 (lower is better)
Translates to: MKGSWNPPPHPKMKGELGPSSYL*FIYRWE
Trigger: CTCCCATCTGTAAATAAACAAGAGATAGGAAGAGGG...TCCGAGTTCTCCTTTCATTTTTGGGTGGGGAGGCGGGTTCCAAGAGCCCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp AGATGGAACAGGCAAGGTGCCTTTCATTTCCCTACCAAATACACACATTCCCAACTCCTTCCCAGAACCTaGCATGCATCCTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: RWNRQGAFHFPTKYTHSQLLPRT*HASFSP
Trigger: GGGACTGAAGGATGCATGCAAGGTTCTGGGAAGGAG...TTGGGAATGTGTGTATTTGGTAGGGAAATGAAAGGCACCTTGCCTGTTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp TCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCTGGTCCCAACGTTTGCACGTTCTTGAACCAAACTaGGGTAGGGCACAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: SVSPKNETYSGFWSQRLHVLEPN*GRAQPG
Trigger: ACCAGGCTGTGCCCTACCCAAGTTTGGTTCAAGAAC...GTGCAAACGTTGGGACCAGAATCCACTATAAGTTTCATTCTTCGGAGACACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613299.1
CDS-3UTR CAA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGGACAGCTGGTTCGGGTaGCTTTCTCAGGAATGCCAT +
Preference number: 5 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLDSWFG*LSQECH
Trigger: ATGGCATTCCTGAGAAAGCAACCCGAACCAGCTGTC...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS-3UTR CAA 90 bp ATGTTGAATAAAAACCTCTTTGTGGGCTCTAGAGATCAGGGTGTACCCCTCAGGCAGACGGTGTTAGGGTaGAGAGAATCACTAGGACCT +
Preference number: 5 (lower is better)
Translates to: MLNKNLFVGSRDQGVPLRQTVLG*RESLGP
Trigger: AGGTCCTAGTGATTCTCTCAACCCTAACACCGTCTG...CCTGAGGGGTACACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTATTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp TATAGGTGGTACGTCCCAAGCAGCTACCCCAGTTCCACCAGTGTCTCACCTTTATATGAATGTAGATCTTaGTCTCTCAAACGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: YRWYVPSSYPSSTSVSPLYECRS*SLKRSP
Trigger: AGGGGACCGTTTGAGAGACAAAGATCTACATTCATA...TAAAGGTGAGACACTGGTGGAACTGGGGTAGCTGCTTGGGACGTACCACCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp GGCCTCCAGTGCAGAGCTTCCGTGTCTCCGAAGAATGAAACTTATAGTGGATTCAAAGGGAATGTATGTTaGAAATGTAGGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GLQCRASVSPKNETYSGFKGNVC*KCRAAS
Trigger: GGAGGCAGCCCTACATTTCAAACATACATTCCCTTT...GAATCCACTATAAGTTTCATTCTTCGGAGACACGGAAGCTCTGCACTGGAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp ATGTTGAATAAAAACCTCTTTGTGGGCTCTAGAGATCAGGGTGTACCCCTCAGGAAAGGGAATGTATGTTaGAAATGTAGGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: MLNKNLFVGSRDQGVPLRKGNVC*KCRAAS
Trigger: GGAGGCAGCCCTACATTTCAAACATACATTCCCTTT...CCTGAGGGGTACACCCTGATCTCTAGAGCCCACAAAGAGGTTTTTATTCAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221996.12
ENST00000613299.1
CDS-3UTR CAA 90 bp TTGTCTTCCTCTGTTTATATTTTCATCCCACACTGGACTCTTGAGCCACTCCTGTCAAGTTTCTATGACTaGTTTGCACAAGACACAGCC +
Preference number: 5 (lower is better)
Translates to: LSSSVYIFIPHWTLEPLLSSFYD*FAQDTA
Trigger: GGCTGTGTCTTGTGCAAACAAGTCATAGAAACTTGA...CAGGAGTGGCTCAAGAGTCCAGTGTGGGATGAAAATATAAACAGAGGAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS TCA 72 bp GGCCGTCTGACCCTCGGCGACCAGTCCAGAGGCTCCTaGTGGGAGAATCCAGTCCTGGAACAGACCCCCTGG +
Preference number: 6 (lower is better)
Translates to: GRLTLGDQSRGS*WENPVLEQTPW
Trigger: CCAGGGGGTCTGTTCCAGGACTGGATTCTCCCATCAGGAGCCTCTGGACTGGTCGCCGAGGGTCAGACGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566686.5
CDS GCA 72 bp TGGGAGAATCCAGTCCTGGAACAGACCCCCTGGCCCTaGAGCAGGGAAGGAAGGTCAGCTGTACAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: WENPVLEQTPWP*SREGRSAVQGE
Trigger: CTCTCCCTGTACAGCTGACCTTCCTTCCCTGCTGCAGGGCCAGGGGGTCTGTTCCAGGACTGGATTCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566686.5
CDS CAA 90 bp CCTCAGCCTCCATGTCCTTCTGTTCCTGTCTGTCTGTCCCTCCCTTaGCTGTCTTTCTGCCTGTCCACCTGTCCCTGTAACTCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: PQPPCPSVPVCLSLP*LSFCLSTCPCNSSL
Trigger: GAGGCTGGAGTTACAGGGACAGGTGGACAGGCAGAAAGACAGCAAAGGGAGGGACAGACAGACAGGAACAGAAGGACATGGAGGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604324.1
CDS TCA 72 bp CGGGTTCATATACGCCATCATGATCTTCGGGGACACTaGGGCCCAAGTCAGGGGGCCTTCAGAAAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: RVHIRHHDLRGH*GPSQGAFRKEG
Trigger: TCCCTCCTTTCTGAAGGCCCCCTGACTTGGGCCTCAGTGTCCCCGAAGATCATGATGGCGTATATGAACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221996.12
ENST00000539067.5
ENST00000613299.1
CDS TCA 72 bp CCCTCACATGGGGAGATTTTAAGCCTGGGCCGGGAGTaGTGTCATTTGTCATGGCCTGGAACTCGGAGGGTA +
Preference number: 6 (lower is better)
Translates to: PSHGEILSLGRE*CHLSWPGTRRV
Trigger: TACCCTCCGAGTTCCAGGCCATGACAAATGACATCACTCCCGGCCCAGGCTTAAAATCTCCCCATGTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604324.1
CDS CCA 72 bp AGACAGCAGAGGCTGAAGGAAACACATCCCCTCACATaGGGAGATTTTAAGCCTGGGCCGGGAGTGATGTCA +
Preference number: 6 (lower is better)
Translates to: RQQRLKETHPLT*GDFKPGPGVMS
Trigger: TGACATCACTCCCGGCCCAGGCTTAAAATCTCCCCATGTGAGGGGATGTGTTTCCTTCAGCCTCTGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604324.1
CDS CAA 90 bp TCTTTGACTTGGTCAAGTCTTGTCTGTGGCCTCTCTGTCTCTGTGTaGTCAGACATGATATTCTCCTCTTTTTGGGGGCGGAGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: SLTWSSLVCGLSVSV*SDMIFSSFWGRRWQ
Trigger: CTGCCACCTCCGCCCCCAAAAAGAGGAGAATATCATGTCTGACAACACAGAGACAGAGAGGCCACAGACAAGACTTGACCAAGTCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000604324.1
CDS CAA 72 bp TCTCTTATTCTTTTTCTCTGTGTCTCCCTGTCTATCTaGCTCTTTCTCCCCTCTCCCTCAGCCTCCATGTCC +
Preference number: 6 (lower is better)
Translates to: SLILFLCVSLSI*LFLPSPSASMS
Trigger: GGACATGGAGGCTGAGGGAGAGGGGAGAAAGAGCAAGATAGACAGGGAGACACAGAGAAAAAGAATAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604324.1
CDS CAA 72 bp CAACAAACCCAGCACTCACCATCTCTCTACACACCATaGGTCTTTGTCTGGCTTCTCTGTACCTCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: QQTQHSPSLYTP*VFVWLLCTSVS
Trigger: AGAAACTGAGGTACAGAGAAGCCAGACAAAGACCAATGGTGTGTAGAGAGATGGTGAGTGCTGGGTTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604324.1