RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRTC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000140577

Ensembl transcript IDs: ENST00000268184.11, ENST00000420329.6, ENST00000558005.1, ENST00000558167.1, ENST00000558496.5, ENST00000558619.5, ENST00000560047.1, ENST00000560098.5, ENST00000560320.1, ENST00000560927.1, ENST00000561119.5, ENST00000561218.5, ENST00000561255.5, ENST00000561290.1

Found 711 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTCTGGGTCAGGTCAGAGCAGGCATCGAGGTGCCCTCTCCGGTaGCGCCGCCCCAGGCCGAGCCTCCCACTCCGGGCCCGCCTTCGG +
Preference number: 1 (lower is better)
Translates to: ALWVRSEQASRCPLR*RRPRPSLPLRARLR
Trigger: CCGAAGGCGGGCCCGGAGTGGGAGGCTCGGCCTGGGGCGGCGGCACCGGAGAGGGCACCTCGATGCCTGCTCTGACCTGACCCAGAGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp GTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTaGGTCAGGTCAGAGCAGGCATCGAGGTGCCCTCTCCGGTGCCGC +
Preference number: 1 (lower is better)
Translates to: VHSAWECPPLEGLAL*VRSEQASRCPLRCR
Trigger: GCGGCACCGGAGAGGGCACCTCGATGCCTGCTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp TGCCGCCGCCCCAGGCCGAGCCTCCCACTCCGGGCCCGCCTTCGGTaGGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACG +
Preference number: 1 (lower is better)
Translates to: CRRPRPSLPLRARLR*GRRSVVLSTLHNAT
Trigger: CGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCGCACCGAAGGCGGGCCCGGAGTGGGAGGCTCGGCCTGGGGCGGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp TGGGAGAGAGCCGTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTaGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGCAGGCATCGAGGT +
Preference number: 1 (lower is better)
Translates to: WERAVGSTQPGNVPR*RASPSGSGQSRHRG
Trigger: ACCTCGATGCCTGCTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCACGGCTCTCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp TGTCGTAATCCAGGCGTGGGAGAGAGCCGTGGGGTCCACTCAGCCTaGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCA +
Preference number: 1 (lower is better)
Translates to: CRNPGVGESRGVHSA*ECPPLEGLALWVRS
Trigger: TGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCACGGCTCTCTCCCACGCCTGGATTACGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 90 bp AGAGGCAAAGGATGCTCTCAGGATCCCTGGGCACCAGGCAGAGTGTaGGCAGGTGGAGGGGGTGGCGGGAGCCTCCGGGCACAGGAGCTT +
Preference number: 1 (lower is better)
Translates to: RGKGCSQDPWAPGRV*AGGGGGGSLRAQEL
Trigger: AAGCTCCTGTGCCCGGAGGCTCCCGCCACCCCCTCCACCTGCTCACACTCTGCCTGGTGCCCAGGGATCCTGAGAGCATCCTTTGCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR GCA 90 bp TCAGGGCCAGTGCCCGTCTTCCTGGTAGAGAGCCCCTGTCCTCCATaGTCGCCTTGGCCAATCGCATCCTTCCCTCGGCCCCACTGTCAC +
Preference number: 1 (lower is better)
Translates to: SGPVPVFLVESPCPP*SPWPIASFPRPHCH
Trigger: GTGACAGTGGGGCCGAGGGAAGGATGCGATTGGCCAAGGCGAGCATGGAGGACAGGGGCTCTCTACCAGGAAGACGGGCACTGGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR CCA 90 bp GTGCCCGTCTTCCTGGTAGAGAGCCCCTGTCCTCCATGCTCGCCTTaGCCAATCGCATCCTTCCCTCGGCCCCACTGTCACCCACAGTCC +
Preference number: 1 (lower is better)
Translates to: VPVFLVESPCPPCSP*PIASFPRPHCHPQS
Trigger: GGACTGTGGGTGACAGTGGGGCCGAGGGAAGGATGCGATTGGCCAAGGCGAGCATGGAGGACAGGGGCTCTCTACCAGGAAGACGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR TCA 90 bp GTCCTGTGGCCTCGCAGCCTCAGGCCACACCTGCCTGCATTGCTCTaGGAGGCAAAGGATGCTCTCAGGATCCCTGGGCACCAGGCAGAG +
Preference number: 1 (lower is better)
Translates to: VLWPRSLRPHLPALL*EAKDALRIPGHQAE
Trigger: CTCTGCCTGGTGCCCAGGGATCCTGAGAGCATCCTTTGCCTCTCAGAGCAATGCAGGCAGGTGTGGCCTGAGGCTGCGAGGCCACAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR GCA 90 bp GATCTTCCTGGGTGGGGCCCAGCCAGGATGCTCAGGGCACTCACCTaGTCAGCCCTTCCGGATGTACTCAGAAGACAGCTCCCACCCACC +
Preference number: 1 (lower is better)
Translates to: DLPGWGPARMLRALT*SALPDVLRRQLPPT
Trigger: GGTGGGTGGGAGCTGTCTTCTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCCCACCCAGGAAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp GGCATGGCGGACGCACTCATTCATCATGCGCTGCACGCACGGTTCTaGAGCACTCACTCCAGCACACGACTGTGCTGCCACGCACGTGTT +
Preference number: 1 (lower is better)
Translates to: GMADALIHHALHARF*STHSSTRLCCHARV
Trigger: AACACGTGCGTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGCATGATGAATGAGTGCGTCCGCCATGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 90 bp TCCCACTCCGGGCCCGCCTTCGGTGCGGACGGAGATCAGTGGTTCTaGGCACACTACACAATGCTACGGAGGCCTCCAGTGACACAGTAT +
Preference number: 1 (lower is better)
Translates to: SHSGPAFGADGDQWF*AHYTMLRRPPVTQY
Trigger: ATACTGTGTCACTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCGCACCGAAGGCGGGCCCGGAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp GCAGTGGAGGTGAGCTTTCCAGTTCATGGGAAGCTCCAAGCAGCCTaGCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCAGTAC +
Preference number: 1 (lower is better)
Translates to: AVEVSFPVHGKLQAA*LLQHDFGHRRERQY
Trigger: GTACTGCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCTTCCCATGAACTGGAAAGCTCACCTCCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp ACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCATaGGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACT +
Preference number: 1 (lower is better)
Translates to: TGEPALRHGGRTHSS*AARTVLQHSLQHTT
Trigger: AGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGCATGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp CTCCAGGGTCTCCTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTaGCATCTTCCGTCTCTCCTTCAGGGTTCTCCTCCTCTCCACCCT +
Preference number: 1 (lower is better)
Translates to: LQGLLEGQWLSKQRS*HLPSLLQGSPPLHP
Trigger: AGGGTGGAGAGGAGGAGAACCCTGAAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAGGAGACCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTaGTGCCACGCACGTGTTAGGTGCTACGGGTTCAACAATGATAAG +
Preference number: 1 (lower is better)
Translates to: ALHARFCSTHSSTRL*CHARVRCYGFNNDK
Trigger: CTTATCATTGTTGAACCCGTAGCACCTAACACGTGCGTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp CTGTGTAGGTCTTGGGGTCTCTGTTGCCAGGCAGGGTGGCTGCTGTaGAGACAAACTGAACTGGGACCCGGATATGACGATACCCATGGG +
Preference number: 1 (lower is better)
Translates to: LCRSWGLCCQAGWLL*RQTELGPGYDDTHG
Trigger: CCCATGGGTATCGTCATATCCGGGTCCCAGTTCAGTTTGTCTGCACAGCAGCCACCCTGCCTGGCAACAGAGACCCCAAGACCTACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp AGTTCATGGGAAGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTaGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGG +
Preference number: 1 (lower is better)
Translates to: SSWEAPSSLPAATRL*PQAGEAVQSCVIWR
Trigger: CCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCTTCCCATGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp CTGGGTGGAACAGTCCAGCAACCCTCAGTACACTCCAGGGTCTCCTaGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGT +
Preference number: 1 (lower is better)
Translates to: LGGTVQQPSVHSRVS*KGNGCPSKGPGIFR
Trigger: ACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAGGAGACCCTGGAGTGTACTGAGGGTTGCTGGACTGTTCCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp GTTCACTGTGTAGGTCTTGGGGTCTCTGTTGCCAGGCAGGGTGGCTaGTGTGCAGACAAACTGAACTGGGACCCGGATATGACGATACCC +
Preference number: 1 (lower is better)
Translates to: VHCVGLGVSVARQGG*CADKLNWDPDMTIP
Trigger: GGGTATCGTCATATCCGGGTCCCAGTTCAGTTTGTCTGCACAGCAGCCACCCTGCCTGGCAACAGAGACCCCAAGACCTACACAGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp AGTCCAGCAACCCTCAGTACACTCCAGGGTCTCCTGGAAGGGCAATaGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTCAG +
Preference number: 1 (lower is better)
Translates to: SPATLSTLQGLLEGQ*LSKQRSWHLPSLLQ
Trigger: CTGAAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAGGAGACCCTGGAGTGTACTGAGGGTTGCTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp GGTGCCCTGGGGGTTAGGACACTGGCAGGAAGTCTGATTAGTTGCTaGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCA +
Preference number: 1 (lower is better)
Translates to: GALGVRTLAGSLISC*DGPIHEALDTCWEP
Trigger: TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAATCAGACTTCCTGCCAGTGTCCTAACCCCCAGGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp CTGGCTGCTCTTAGTGGGGAGGTCTGTGCTTGTCTGGAGTTTGTCTaGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCCTTC +
Preference number: 1 (lower is better)
Translates to: LAALSGEVCACLEFV*RPLSMRHLQSLSSF
Trigger: GAAGGAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACCTCCCCACTAAGAGCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp GTGTGCCAGATTCAGACCCTCATTGTACAGCCTTGCTCCTCTGGGTaGAACAGTCCAGCAACCCTCAGTACACTCCAGGGTCTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: VCQIQTLIVQPCSSG*NSPATLSTLQGLLE
Trigger: TTCCAGGAGACCCTGGAGTGTACTGAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCTGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp ACAGGTGTGCCAGATTCAGACCCTCATTGTACAGCCTTGCTCCTCTaGGTGGAACAGTCCAGCAACCCTCAGTACACTCCAGGGTCTCCT +
Preference number: 1 (lower is better)
Translates to: TGVPDSDPHCTALLL*VEQSSNPQYTPGSP
Trigger: AGGAGACCCTGGAGTGTACTGAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCTGGCACACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 90 bp TACACATCGGCTGACTGGATGGCCAGTAAAAAGATGCAGTGGAGGTaGGCTTTCCAGTTCATGGGAAGCTCCAAGCAGCCTGCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: YTSADWMASKKMQWR*AFQFMGSSKQPACC
Trigger: GCAGCAGGCAGGCTGCTTGGAGCTTCCCATGAACTGGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCATCCAGTCAGCCGATGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 90 bp TGGTTGAACAGGGTGCCCTGGGGGTTAGGACACTGGCAGGAAGTCTaGTTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACAT +
Preference number: 1 (lower is better)
Translates to: WLNRVPWGLGHWQEV*LVAGMVPSMKHWTH
Trigger: ATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAATCAGACTTCCTGCCAGTGTCCTAACCCCCAGGGCACCCTGTTCAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp CATAAGGGACAGGTGTGCCAGATTCAGACCCTCATTGTACAGCCTTaGTCCTCTGGGTGGAACAGTCCAGCAACCCTCAGTACACTCCAG +
Preference number: 1 (lower is better)
Translates to: HKGQVCQIQTLIVQP*SSGWNSPATLSTLQ
Trigger: CTGGAGTGTACTGAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCTGGCACACCTGTCCCTTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp GGATGGCCAGTAAAAAGATGCAGTGGAGGTGAGCTTTCCAGTTCATaGGAAGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCA +
Preference number: 1 (lower is better)
Translates to: GWPVKRCSGGELSSS*EAPSSLPAATRLWP
Trigger: TGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCTTCCCATGAACTGGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp GTCTCTGTTGCCAGGCAGGGTGGCTGCTGTGCAGACAAACTGAACTaGGACCCGGATATGACGATACCCATGGGTAAGGCACTATGTGAA +
Preference number: 1 (lower is better)
Translates to: VSVARQGGCCADKLN*DPDMTIPMGKALCE
Trigger: TTCACATAGTGCCTTACCCATGGGTATCGTCATATCCGGGTCCCAGTTCAGTTTGTCTGCACAGCAGCCACCCTGCCTGGCAACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp GAATTTACCATTTACTCAAGAAACATTTCTGGCATCCCTGCCAGGTaGCAGCGTGCCAGCGGAAGGGCAGCACAGGTCACAGGGCTTTTA +
Preference number: 1 (lower is better)
Translates to: EFTIYSRNISGIPAR*QRASGRAAQVTGLL
Trigger: TAAAAGCCCTGTGACCTGTGCTGCCCTTCCGCTGGCACGCTGGCACCTGGCAGGGATGCCAGAAATGTTTCTTGAGTAAATGGTAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR TCA 90 bp ATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGTaGCACAGTATTTCCTACTCTTACACATCGGCTGACTGGATGGCC +
Preference number: 1 (lower is better)
Translates to: ISGSEHTTQCYGGLQ*HSISYSYTSADWMA
Trigger: GGCCATCCAGTCAGCCGATGTGTAAGAGTAGGAAATACTGTGTCACTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp TTTCCTACTCTTACACATCGGCTGACTGGATGGCCAGTAAAAAGATaGAGTGGAGGTGAGCTTTCCAGTTCATGGGAAGCTCCAAGCAGC +
Preference number: 1 (lower is better)
Translates to: FPTLTHRLTGWPVKR*SGGELSSSWEAPSS
Trigger: GCTGCTTGGAGCTTCCCATGAACTGGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCATCCAGTCAGCCGATGTGTAAGAGTAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp ATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCATCTGTaGATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCT +
Preference number: 1 (lower is better)
Translates to: MVPSMKHWTHAGNHL*INQKSQQEWEQERS
Trigger: AGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCACAGATGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 90 bp CTGATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATaGTGGGAACCATCTGTGCATAAATCAGAAGAGCCAACAAGAGTG +
Preference number: 1 (lower is better)
Translates to: LISCWDGPIHEALDT*WEPSVHKSEEPTRV
Trigger: CACTCTTGTTGGCTCTTCTGATTTATGCACAGATGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp TTTACTCTGAAGTATGCAGCTGCTTCAAATGCTGAGGACCACAACTaGTTTTGTTACAAAGGCCGCAGTGAGTGCAGGCTCACGTGCTGT +
Preference number: 1 (lower is better)
Translates to: FTLKYAAASNAEDHN*FCYKGRSECRLTCC
Trigger: ACAGCACGTGAGCCTGCACTCACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGCATACTTCAGAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTaGGAACCATCTGTGCATAAATCAGAAGAGCCAACAAGAGTGGGA +
Preference number: 1 (lower is better)
Translates to: ISCWDGPIHEALDTC*EPSVHKSEEPTRVG
Trigger: TCCCACTCTTGTTGGCTCTTCTGATTTATGCACAGATGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 90 bp TCCAGTGACACAGTATTTCCTACTCTTACACATCGGCTGACTGGATaGCCAGTAAAAAGATGCAGTGGAGGTGAGCTTTCCAGTTCATGG +
Preference number: 1 (lower is better)
Translates to: SSDTVFPTLTHRLTG*PVKRCSGGELSSSW
Trigger: CCATGAACTGGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCATCCAGTCAGCCGATGTGTAAGAGTAGGAAATACTGTGTCACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 90 bp AACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTaGAGATACAACACCAGCTCAGGTAATATACAGCAGGCGGAGGAG +
Preference number: 1 (lower is better)
Translates to: NKSGNRKGLQIRIWT*RYNTSSGNIQQAEE
Trigger: CTCCTCCGCCTGCTGTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGAGATGGGATCTCATCTaGAACCCTGGAGCCGTGGCA +
Preference number: 2 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGRWDLI*NPGAVA
Trigger: TGCCACGGCTCCAGGGTTTCAGATGAGATCCCATCT...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGCGGGCCCGCCTTCGGTaGGGACGGAGATCAGTGGTT +
Preference number: 2 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQRARLR*GRRSVV
Trigger: AACCACTGATCTCCGTCCGCACCGAAGGCGGGCCCG...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACGCTGCAACACGACTTTaGCCACAGGCGGGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHAATRL*PQAGEA
Trigger: TGCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGC...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACTCCAAGCAGCCTGCCTaGTGCAACACGACTTTGGCC +
Preference number: 2 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHSKQPA*CNTTLA
Trigger: GGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGA...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGGCCCGTGGTATCAGCTaGCTTCATTCTATTCCATTC +
Preference number: 2 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGARGIS*LHSIPF
Trigger: GAATGGAATAGAATGAAGCCAGCTGATACCACGGGC...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGGCTGCAACACGACTTTaGCCACAGGCGGGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQAATRL*PQAGEA
Trigger: TGCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGC...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGCATCGGCTGACTGGATaGCCAGTAAAAAGATGCAGT +
Preference number: 2 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGHRLTG*PVKRCS
Trigger: ACTGCATCTTTTTACTGGCCATCCAGTCAGCCGATG...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGGGAAGCCACAGTGTCTaGGATGGGATCTCATCTGAA +
Preference number: 2 (lower is better)
Translates to: SAWECPPLEGLALWVRSEGSHSV*DGISSE
Trigger: TTCAGATGAGATCCCATCTCAGACACTGTGGCTTCC...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTACAGCCCAAGGAGAATaGAGTGCCCGGCTTCACTGT +
Preference number: 2 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTTAQGE*SARLHC
Trigger: ACAGTGAAGCCGGGCACTGCATTCTCCTTGGGCTGT...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCTCCTCCATTGCTTCCTAGCAGGTGGAGGGGGTaGCGGGAGCCTCCGGGCACA +
Preference number: 2 (lower is better)
Translates to: AQVTGLLTTTSAPPPLLPSRWRG*REPPGT
Trigger: TGTGCCCGGAGGCTCCCGCCACCCCCTCCACCTGCT...AGGAAGCAATGGAGGAGGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR CCA 90 bp ACTCAAGAAACATTTCTGGCATCCCTGCCAGGTGCCAGCGTGCCAGCGGAAGGGCGTCCTGATGTTCCCTaGGGTCCTGTGGCCTCGCAG +
Preference number: 2 (lower is better)
Translates to: TQETFLASLPGASVPAEGRPDVP*GPVASQ
Trigger: CTGCGAGGCCACAGGACCCCAGGGAACATCAGGACG...CCCTTCCGCTGGCACGCTGGCACCTGGCAGGGATGCCAGAAATGTTTCTTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR CCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTGAGGGCCTCGCCCTCTaGGTCAGGTCAGAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLEGLAL*VRSEQA
Trigger: TGCCTGCTCTGACCTGACCCAGAGGGCGAGGCCCTC...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCGGGAATGTCCCCCGCTaGAGGGCCTCGCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSGNVPR*RASPSG
Trigger: CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCC...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CAA 90 bp CAGTTCATGGGAAGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTaGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAG +
Preference number: 2 (lower is better)
Translates to: QFMGSSKQPACCNTT*ATGGRGSTKLCDLE
Trigger: CTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCTTCCCATGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCATCGGCTGACTGGATaGCCAGTAAAAAGATGCAGT +
Preference number: 2 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTHRLTG*PVKRCS
Trigger: ACTGCATCTTTTTACTGGCCATCCAGTCAGCCGATG...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTAAAGGTGTACTTTTCTaGAGCAGCAGAAACCAGCTG +
Preference number: 2 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTKGVLF*SSRNQL
Trigger: CAGCTGGTTTCTGCTGCTTCAGAAAAGTACACCTTT...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGGAAAAGCTAAAGCTCTaGGAAGATCTGGCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQEKLKL*EDLAGK
Trigger: CTTCCCTGCCAGATCTTCTCAGAGCTTTAGCTTTTC...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCAAAGCAGCCTGCCTGCTaGAACACGACTTTGGCCACA +
Preference number: 2 (lower is better)
Translates to: GIATGEPALRHGGRTHSSKQPAC*NTTLAT
Trigger: TGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTT...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTCTCAGGGCACTCACCTaGTCAGCCCTTCCGGATGTA +
Preference number: 2 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLLRALT*SALPDV
Trigger: TACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAG...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp AGTGCCCGTCTTCCTGGTAGAGAGCCCCTGTCCTCCATGCTCGCCTTGGCCAATGCCTCTGCAGTTCTGTaGAGGAAAATCTTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: SARLPGREPLSSMLALANASAVL*RKIFLL
Trigger: GAGGAGGAAGATTTTCCTGCACAGAACTGCAGAGGC...ATTGGCCAAGGCGAGCATGGAGGACAGGGGCTCTCTACCAGGAAGACGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR GCA 90 bp AGTGCCCGTCTTCCTGGTAGAGAGCCCCTGTCCTCCATGCTCGCCTTGGCCAATCTCTCCCCAAGCCTCTaGAGTTCTGTGCAGGAAAAT +
Preference number: 2 (lower is better)
Translates to: SARLPGREPLSSMLALANLSPSL*SSVQEN
Trigger: ATTTTCCTGCACAGAACTGCAGAGGCTTGGGGAGAG...ATTGGCCAAGGCGAGCATGGAGGACAGGGGCTCTCTACCAGGAAGACGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR CCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTAGAGGAGGCAGGCGGTaGTGGAAATCTGGCCCATCT +
Preference number: 2 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLRGGRR*WKSGPS
Trigger: AGATGGGCCAGATTTCCACCACCGCCTGCCTCCTCT...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCTCCAAGCAGCCTGCCTaGTGCAACACGACTTTGGCC +
Preference number: 2 (lower is better)
Translates to: SGVCLEATEYETPAVPVFSKQPA*CNTTLA
Trigger: GGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGA...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp TGCCAGCGGAAGGGCAGCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCGTGCATACTTCCAACTaGCTACTCAAGTTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: CQRKGSTGHRAFNNHISAVHTSN*LLKFSA
Trigger: GGCAGAGAACTTGAGTAGGCAGTTGGAAGTATGCAC...GGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGCTGCCCTTCCGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR GCA 90 bp GCCAGGTGCCAGCGTGCCAGCGGAAGGGCAGCACAGGTCACAGGGCTTTTAACATTTGTGAACTCCAAGTaGATACTTCCAACTGCCTAC +
Preference number: 2 (lower is better)
Translates to: ARCQRASGRAAQVTGLLTFVNSK*ILPTAY
Trigger: GTAGGCAGTTGGAAGTATGCACTTGGAGTTCACAAA...TGTTAAAAGCCCTGTGACCTGTGCTGCCCTTCCGCTGGCACGCTGGCACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR CCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTAGGTCTGTGCTTGTCTaGAGTTTGTCTGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLRSVLV*SLSGGH
Trigger: GTGGCCTCCAGACAAACTCCAGACAAGCACAGACCT...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTAGCTCTGGGGAGGGATaGGGAAGCTCAGTTGCTCGG +
Preference number: 2 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSSSGEG*GSSVAR
Trigger: CCGAGCAACTGAGCTTCCCCATCCCTCCCCAGAGCT...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCGCCTGCCTTACGGCATaGCGGACGCACTCATTCATC +
Preference number: 2 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSACLTA*RTHSFI
Trigger: GATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGC...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CAA 90 bp GACCCTGCCCGTGGTGAGTCCTCCACACCTTCTAGGCAGAGTGGGTaGTACGATGCCCAAAACCTTTCACAAGAAAAGATCGGACTCACT +
Preference number: 2 (lower is better)
Translates to: DPARGESSTPSRQSG*YDAQNLSQEKIGLT
Trigger: AGTGAGTCCGATCTTTTCTTGTGAAAGGTTTTGGGCATCGTACAACCCACTCTGCCTAGAAGGTGTGGAGGACTCACCACGGGCAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTCAGTACAAAGCTGTGTaGTCTGGAGGAAGCCACAGT +
Preference number: 2 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLQYKAV*SGGSHS
Trigger: ACTGTGGCTTCCTCCAGATCACACAGCTTTGTACTG...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAACTGGGACCCGGATATaGCGATACCCATGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPTGTRI*RYPWVR
Trigger: CCTTACCCATGGGTATCGTCATATCCGGGTCCCAGT...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGCTGGAGCCGTGGCATTaGTTCCTTCTATGTCAAGAT +
Preference number: 2 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQLEPWH*FLLCQD
Trigger: ATCTTGACATAGAAGGAAGCAATGCCACGGCTCCAG...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACGAGCAGGCATCGAGGTaGCCTCTCCGGTGCCGCCGC +
Preference number: 2 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYEQASR*PLRCRR
Trigger: GCGGCGGCACCGGAGAGGGCACCTCGATGCCTGCTC...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp GCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCTCCTCCATTGCTTCCTCACACCTGCCTGCATTaGTCTGAGAGGCAAAGGATG +
Preference number: 2 (lower is better)
Translates to: AQVTGLLTTTSAPPPLLPHTCLH*SERQRM
Trigger: CATCCTTTGCCTCTCAGAGCAATGCAGGCAGGTGTG...AGGAAGCAATGGAGGAGGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR CCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTGCCTGCCTTACGGCATaGCGGACGCACTCATTCATC +
Preference number: 2 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSACLTA*RTHSFI
Trigger: GATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGC...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAACAGCCTTGCTCCTCTaGGTGGAACAGTCCAGCAAC +
Preference number: 2 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPTALLL*VEQSSN
Trigger: GTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGT...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCATGTTGCCAGGCAGGGTaGCTGCTGTGCAGACAAACT +
Preference number: 2 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPCCQAG*LLCRQT
Trigger: AGTTTGTCTGCACAGCAGCCACCCTGCCTGGCAACA...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CAA 90 bp GACTCCTTTTACATAAGGGACAGGTGTGCCAGATTCAGACCCTCATaGTACAGCCTTGCTCCTCTGGGTGGAACAGTCCAGCAACCCTCA +
Preference number: 2 (lower is better)
Translates to: DSFYIRDRCARFRPS*YSLAPLGGTVQQPS
Trigger: TGAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCTGGCACACCTGTCCCTTATGTAAAAGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTAGATGGGATCTCATCTaGAACCCTGGAGCCGTGGCA +
Preference number: 2 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSRWDLI*NPGAVA
Trigger: TGCCACGGCTCCAGGGTTTCAGATGAGATCCCATCT...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTGATAACGAAAGCCCGTaGTATCAGCTGGCTTCATTC +
Preference number: 2 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLDNESP*YQLASF
Trigger: GAATGAAGCCAGCTGATACCACGGGCTTTCGTTATC...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTCGTGGGAGAGAGCCGTaGGGTCCACTCAGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCRGREP*GPLSLG
Trigger: TCCCAGGCTGAGTGGACCCCACGGCTCTCTCCCACG...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCAGGTCTGTGCTTGTCTaGAGTTTGTCTGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSRSVLV*SLSGGH
Trigger: GTGGCCTCCAGACAAACTCCAGACAAGCACAGACCT...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTCTCCTGGAAGGGCAATaGCTGTCCAAGCAAAGGTCC +
Preference number: 2 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSLLEGQ*LSKQRS
Trigger: GGACCTTTGCTTGGACAGCCATTGCCCTTCCAGGAG...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGGGAAGCCACAGTGTCTaGGATGGGATCTCATCTGAA +
Preference number: 2 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLGSHSV*DGISSE
Trigger: TTCAGATGAGATCCCATCTCAGACACTGTGGCTTCC...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCGGAGATCAGTGGTTCTaGGCACACTACACAATGCTA +
Preference number: 2 (lower is better)
Translates to: SGVCLEATEYETPAVPVFGDQWF*AHYTML
Trigger: TAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCC...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGGAGATCAGTGGTTCTaGGCACACTACACAATGCTA +
Preference number: 2 (lower is better)
Translates to: CLSGVCLEATEYETPAVPGDQWF*AHYTML
Trigger: TAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCC...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCTGGCCAGTAAAAAGATaGAGTGGAGGTGAGCTTTCC +
Preference number: 2 (lower is better)
Translates to: SGVCLEATEYETPAVPVFWPVKR*SGGELS
Trigger: GGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCA...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCCTTCAGGCTCATCAGTaGCAGGGGACTCTTTTCAGT +
Preference number: 2 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSLQAHQ*QGTLFS
Trigger: ACTGAAAAGAGTCCCCTGGCACTGATGAGCCTGAAG...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAAGTGCTAAACCATATTaGCCCCAGTGTACACCCCCA +
Preference number: 2 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPSAKPY*PQCTPP
Trigger: TGGGGGTGTACACTGGGGGCAATATGGTTTAGCACT...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCGATAACGAAAGCCCGTaGTATCAGCTGGCTTCATTC +
Preference number: 2 (lower is better)
Translates to: SGVCLEATEYETPAVPVFDNESP*YQLASF
Trigger: GAATGAAGCCAGCTGATACCACGGGCTTTCGTTATC...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTTACGGAGGCCTCCAGTaGCACAGTATTTCCTACTCT +
Preference number: 2 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSYGGLQ*HSISYS
Trigger: AGAGTAGGAAATACTGTGTCACTGGAGGCCTCCGTA...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCATGGCCAGTAAAAAGATaGAGTGGAGGTGAGCTTTCC +
Preference number: 2 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPWPVKR*SGGELS
Trigger: GGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCA...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTCTCATTGTACAGCCTTaGTCCTCTGGGTGGAACAGT +
Preference number: 2 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSLIVQP*SSGWNS
Trigger: ACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAG...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCACATAAGGGACAGGTGTaGCAGATTCAGACCCTCATT +
Preference number: 2 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPHKGQV*QIQTLI
Trigger: AATGAGGGTCTGAATCTGGCACACCTGTCCCTTATG...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCTACACATCGGCTGACTaGATGGCCAGTAAAAAGATG +
Preference number: 2 (lower is better)
Translates to: SGVCLEATEYETPAVPVFYTSAD*MASKKM
Trigger: CATCTTTTTACTGGCCATCCAGTCAGCCGATGTGTA...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCTTCCTCTTCCTCTaGTCCATAAGGAAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: GLCLSGVCLEATEYETPAVFLFL*SIRKRC
Trigger: ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGAC...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAGGCTTCACTGTGATTTaGTCACCTAGTGTTAAAAGC +
Preference number: 2 (lower is better)
Translates to: CSALPPSNLLASPKLEEAGFTVI*SPSVKS
Trigger: GCTTTTAACACTAGGTGACCAAATCACAGTGAAGCC...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACTCCCACCCACCCGCGTaGAGCACAGCCCAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYSHPPA*STAQGE
Trigger: TTCTCCTTGGGCTGTGCTCCACGCGGGTGGGTGGGA...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAGCAGACAAACTGAACTaGGACCCGGATATGACGATA +
Preference number: 2 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPADKLN*DPDMTI
Trigger: TATCGTCATATCCGGGTCCCAGTTCAGTTTGTCTGC...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GGCAGCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCTCCTCCATTGCTATCCCCACACTCACATaGATCTTTTCTTATCCCTCT +
Preference number: 2 (lower is better)
Translates to: GSTGHRAFNNHISASSIAIPTLT*IFSYPS
Trigger: AGAGGGATAAGAAAAGATCCATGTGAGTGTGGGGAT...AGCAATGGAGGAGGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR TCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTCTAATGATGCTTCCATaGATTAGGCCTTCGTTTTAC +
Preference number: 2 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLLMMLP*IRPSFY
Trigger: GTAAAACGAAGGCCTAATTCATGGAAGCATCATTAG...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTGGGGCCCAGCCAGGATaGTCAGGGCACTCACCTGCT +
Preference number: 2 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIGAQPG*SGHSPA
Trigger: AGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCCC...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCTACACATCGGCTGACTaGATGGCCAGTAAAAAGATG +
Preference number: 2 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSYTSAD*MASKKM
Trigger: CATCTTTTTACTGGCCATCCAGTCAGCCGATGTGTA...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAACAGCCTTGCTCCTCTaGGTGGAACAGTCCAGCAAC +
Preference number: 2 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPTALLL*VEQSSN
Trigger: GTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGT...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp ACTCAAGAAACATTTCTGGCATCCCTGCCAGGTGCCAGCGTGCCAGCGGAAGGGGGTGGCTGCAATGGATaGAAACAAAAATTAAAGTTA +
Preference number: 2 (lower is better)
Translates to: TQETFLASLPGASVPAEGGGCNG*KQKLKL
Trigger: TAACTTTAATTTTTGTTTCCATCCATTGCAGCCACC...CCCTTCCGCTGGCACGCTGGCACCTGGCAGGGATGCCAGAAATGTTTCTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR CCA 90 bp ACTCAAGAAACATTTCTGGCATCCCTGCCAGGTGCCAGCGTGCCAGCGGAAGGGAAGAGGTGGCTGCAATaGATGGAAACAAAAATTAAA +
Preference number: 2 (lower is better)
Translates to: TQETFLASLPGASVPAEGKRWLQ*METKIK
Trigger: TTTAATTTTTGTTTCCATCCATTGCAGCCACCTCTT...CCCTTCCGCTGGCACGCTGGCACCTGGCAGGGATGCCAGAAATGTTTCTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR TCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTCCAGCTGGGAGAAAATaGAAATTAGCCTTCAGTCTG +
Preference number: 2 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSPAGRK*KLAFSL
Trigger: CAGACTGAAGGCTAATTTTCATTTTCTCCCAGCTGG...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGAAGCTCCAAGCAGCCTaGCTGCTGCAACACGACTTT +
Preference number: 2 (lower is better)
Translates to: CINQKSQQEWEQERSANTKLQAA*LLQHDF
Trigger: AAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCTT...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAATAAGGCACTGTCCCTaGCCTCAAGGAGCTTACGGT +
Preference number: 2 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPIRHCP*PQGAYG
Trigger: ACCGTAAGCTCCTTGAGGGCAGGGACAGTGCCTTAT...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCATCTCATCTGAAACCCTaGAGCCGTGGCATTGCTTCC +
Preference number: 2 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPSHLKP*SRGIAS
Trigger: GGAAGCAATGCCACGGCTCCAGGGTTTCAGATGAGA...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCGGCTTCACTGTGATTTaGTCACCTAGTGTTAAAAGC +
Preference number: 2 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSGFTVI*SPSVKS
Trigger: GCTTTTAACACTAGGTGACCAAATCACAGTGAAGCC...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCACTTCAGGCTCATCAGTaGCAGGGGACTCTTTTCAGT +
Preference number: 2 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPLQAHQ*QGTLFS
Trigger: ACTGAAAAGAGTCCCCTGGCACTGATGAGCCTGAAG...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACCCTGGAGAACGCCTTTaGGGCAGTAGGGTTCACTGT +
Preference number: 2 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYPGERL*GSRVHC
Trigger: ACAGTGAACCCTACTGCCCCAAAGGCGTTCTCCAGG...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTGAGGACCACAACTaGTTTTGTTACAAAGGCCGC +
Preference number: 2 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPAEDHN*FCYKGR
Trigger: GCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGC...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGAAGATAGAAATGGAATaGGGTCGGGAGAGGCTAACC +
Preference number: 2 (lower is better)
Translates to: CINQKSQQEWEQERSANTKIEME*GRERLT
Trigger: GGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTT...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACTCATTCATCATGCGCTaGACGCACGGTTCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYSFIMR*THGSAA
Trigger: TGCTGCAGAACCGTGCGTGCAGCGCATGATGAATGA...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCAAAAGCATATTAAAGTaGATGCTTCACCATAGGCAC +
Preference number: 2 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSKSILK*MLHHRH
Trigger: GTGCCTATGGTGAAGCATGCACTTTAATATGCTTTT...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACTCTCATCTGAAACCCTaGAGCCGTGGCATTGCTTCC +
Preference number: 2 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYSHLKP*SRGIAS
Trigger: GGAAGCAATGCCACGGCTCCAGGGTTTCAGATGAGA...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGTGTCTGGAGTTTGTCTaGAGGCCACTGAGTATGAGA +
Preference number: 2 (lower is better)
Translates to: CINQKSQQEWEQERSANTCLEFV*RPLSMR
Trigger: TCTCATACTCAGTGGCCTCCAGACAAACTCCAGACA...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTACAGAGACACAGCTCTaGGGAGGGATGGGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHITETQL*GGMGKL
Trigger: GAGCTTCCCCATCCCTCCCCAGAGCTGTGTCTCTGT...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp CATGCCCTAAGTAACAACCTCGAGACAAAGGAAACACTCTTATTTATAAACTTGCTGCCTGCATTGCTCTaGGAGGCAAAGGATGCTCTC +
Preference number: 2 (lower is better)
Translates to: HALSNNLETKETLLFINLLPALL*EAKDAL
Trigger: GAGAGCATCCTTTGCCTCTCAGAGCAATGCAGGCAG...CAAGTTTATAAATAAGAGTGTTTCCTTTGTCTCGAGGTTGTTACTTAGGGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR GCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTAAGCAGCCTGCCTGCTaGAACACGACTTTGGCCACA +
Preference number: 2 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIKQPAC*NTTLAT
Trigger: TGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTT...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCGGTGGTGGAAATCTaGCCCATCTATTTTATGAGA +
Preference number: 2 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPAVVEI*PIYFMR
Trigger: TCTCATAAAATAGATGGGCCAGATTTCCACCACCGC...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTTGGCACATGGGGTGCTaGGTAGCATTGCGACTGAAG +
Preference number: 2 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIWHMGC*VALRLK
Trigger: CTTCAGTCGCAATGCTACCCAGCACCCCATGTGCCA...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTAAAAGCCACCCCCTCTaGGATCTTGAGCACAAAGGG +
Preference number: 2 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIKSHPL*DLEHKG
Trigger: CCCTTTGTGCTCAAGATCTCAGAGGGGGTGGCTTTT...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACGCCCGTGGTATCAGCTaGCTTCATTCTATTCCATTC +
Preference number: 2 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYARGIS*LHSIPF
Trigger: GAATGGAATAGAATGAAGCCAGCTGATACCACGGGC...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR TCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAACAAAGGAGAATTCATaGCATGATCAAGAAACCCCT +
Preference number: 2 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPTKENS*HDQETP
Trigger: AGGGGTTTCTTGATCATGTCATGAATTCTCCTTTGT...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTGAAACCCTGGAGCCGTaGCATTGCTTCCTTCTATGT +
Preference number: 2 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIETLEP*HCFLLC
Trigger: ACATAGAAGGAAGCAATGCCACGGCTCCAGGGTTTC...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR GCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGAAAAGCATATTAAAGTaGATGCTTCACCATAGGCAC +
Preference number: 2 (lower is better)
Translates to: CINQKSQQEWEQERSANTKSILK*MLHHRH
Trigger: GTGCCTATGGTGAAGCATGCACTTTAATATGCTTTT...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp GCCGTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTaGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: AVGSTQPGNVPR*RASPSGSGQSR
Trigger: CCTGCTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCACGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp GCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTaGGTCAGGTCAGAGCAGGCATCGAGGTGCCCTCTC +
Preference number: 3 (lower is better)
Translates to: AWECPPLEGLAL*VRSEQASRCPL
Trigger: GAGAGGGCACCTCGATGCCTGCTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp CCCAGGCCGAGCCTCCCACTCCGGGCCCGCCTTCGGTaGGGACGGAGATCAGTGGTTCTGAGCACACTACAC +
Preference number: 3 (lower is better)
Translates to: PRPSLPLRARLR*GRRSVVLSTLH
Trigger: GTGTAGTGTGCTCAGAACCACTGATCTCCGTCCGCACCGAAGGCGGGCCCGGAGTGGGAGGCTCGGCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp GTGCCCGTCTTCCTGGTAGAGAGCCCCTGTCCTCCATaGTCGCCTTGGCCAATCGCATCCTTCCCTCGGCCC +
Preference number: 3 (lower is better)
Translates to: VPVFLVESPCPP*SPWPIASFPRP
Trigger: GGGCCGAGGGAAGGATGCGATTGGCCAAGGCGAGCATGGAGGACAGGGGCTCTCTACCAGGAAGACGGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR GCA 72 bp GGGTGGGGCCCAGCCAGGATGCTCAGGGCACTCACCTaGTCAGCCCTTCCGGATGTACTCAGAAGACAGCTC +
Preference number: 3 (lower is better)
Translates to: GWGPARMLRALT*SALPDVLRRQL
Trigger: GAGCTGTCTTCTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 72 bp GGGCCCGCCTTCGGTGCGGACGGAGATCAGTGGTTCTaGGCACACTACACAATGCTACGGAGGCCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: GPAFGADGDQWF*AHYTMLRRPPV
Trigger: CACTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCGCACCGAAGGCGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp CCTGCCTTACGGCATGGCGGACGCACTCATTCATCATaGGCTGCACGCACGGTTCTGCAGCACTCACTCCAG +
Preference number: 3 (lower is better)
Translates to: PALRHGGRTHSS*AARTVLQHSLQ
Trigger: CTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGCATGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp GACCACAACTGGTTTTGTTACAAAGGCCGCAGTGAGTaGAGGCTCACGTGCTGTGGGCCAGGGCGACCCTGC +
Preference number: 3 (lower is better)
Translates to: DHNWFCYKGRSE*RLTCCGPGRPC
Trigger: GCAGGGTCGCCCTGGCCCACAGCACGTGAGCCTGCACTCACTGCGGCCTTTGTAACAAAACCAGTTGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp TGTGGCCTCGCAGCCTCAGGCCACACCTGCCTGCATTaGTCTGAGAGGCAAAGGATGCTCTCAGGATCCCTG +
Preference number: 3 (lower is better)
Translates to: CGLAASGHTCLH*SERQRMLSGSL
Trigger: CAGGGATCCTGAGAGCATCCTTTGCCTCTCAGAGCAATGCAGGCAGGTGTGGCCTGAGGCTGCGAGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR GCA 72 bp GGTCCTGTGGCCTCGCAGCCTCAGGCCACACCTGCCTaGATTGCTCTGAGAGGCAAAGGATGCTCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: GPVASQPQATPA*IALRGKGCSQD
Trigger: ATCCTGAGAGCATCCTTTGCCTCTCAGAGCAATGCAGGCAGGTGTGGCCTGAGGCTGCGAGGCCACAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR GCA 72 bp GTGAGCTTTCCAGTTCATGGGAAGCTCCAAGCAGCCTaGCTGCTGCAACACGACTTTGGCCACAGGCGGGAG +
Preference number: 3 (lower is better)
Translates to: VSFPVHGKLQAA*LLQHDFGHRRE
Trigger: CTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCTTCCCATGAACTGGAAAGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp GACGCACTCATTCATCATGCGCTGCACGCACGGTTCTaGAGCACTCACTCCAGCACACGACTGTGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: DALIHHALHARF*STHSSTRLCCH
Trigger: GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGCATGATGAATGAGTGCGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp CTTACGGCATGGCGGACGCACTCATTCATCATGCGCTaGACGCACGGTTCTGCAGCACTCACTCCAGCACAC +
Preference number: 3 (lower is better)
Translates to: LTAWRTHSFIMR*THGSAALTPAH
Trigger: GTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGCATGATGAATGAGTGCGTCCGCCATGCCGTAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp GAAGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTaGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: EAPSSLPAATRL*PQAGEAVQSCV
Trigger: CACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CAA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTTGCTGCAACACGACTTaGGCCACAGGCGGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLCCNTT*ATGGRG
Trigger: GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCA...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CAA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTTGCTGCAACACGACTTaGGCCACAGGCGGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: CLSGVCLEATEYETPAVPCCNTT*ATGGRG
Trigger: GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCA...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp ACAGTCCAGCAACCCTCAGTACACTCCAGGGTCTCCTaGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: TVQQPSVHSRVS*KGNGCPSKGPG
Trigger: GCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAGGAGACCCTGGAGTGTACTGAGGGTTGCTGGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp GCCAGGCAGGGTGGCTGCTGTGCAGACAAACTGAACTaGGACCCGGATATGACGATACCCATGGGTAAGGCA +
Preference number: 3 (lower is better)
Translates to: ARQGGCCADKLN*DPDMTIPMGKA
Trigger: TGCCTTACCCATGGGTATCGTCATATCCGGGTCCCAGTTCAGTTTGTCTGCACAGCAGCCACCCTGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 72 bp AGGGTGCCCTGGGGGTTAGGACACTGGCAGGAAGTCTaGTTAGTTGCTGGGATGGTCCCATCCATGAAGCAC +
Preference number: 3 (lower is better)
Translates to: RVPWGLGHWQEV*LVAGMVPSMKH
Trigger: GTGCTTCATGGATGGGACCATCCCAGCAACTAATCAGACTTCCTGCCAGTGTCCTAACCCCCAGGGCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp CTCCTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTaGCATCTTCCGTCTCTCCTTCAGGGTTCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: LLEGQWLSKQRS*HLPSLLQGSPP
Trigger: AGGAGGAGAACCCTGAAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp CAGGTGTGCCAGATTCAGACCCTCATTGTACAGCCTTaGTCCTCTGGGTGGAACAGTCCAGCAACCCTCAGT +
Preference number: 3 (lower is better)
Translates to: QVCQIQTLIVQP*SSGWNSPATLS
Trigger: ACTGAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCTGGCACACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp ATTTACTCAAGAAACATTTCTGGCATCCCTGCCAGGTaGCAGCGTGCCAGCGGAAGGGCAGCACAGGTCACA +
Preference number: 3 (lower is better)
Translates to: IYSRNISGIPAR*QRASGRAAQVT
Trigger: TGTGACCTGTGCTGCCCTTCCGCTGGCACGCTGGCACCTGGCAGGGATGCCAGAAATGTTTCTTGAGTAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR CCA 72 bp CTTAGTGGGGAGGTCTGTGCTTGTCTGGAGTTTGTCTaGAGGCCACTGAGTATGAGACACCTGCAGTCCCTG +
Preference number: 3 (lower is better)
Translates to: LSGEVCACLEFV*RPLSMRHLQSL
Trigger: CAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACCTCCCCACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp ATTCAGACCCTCATTGTACAGCCTTGCTCCTCTGGGTaGAACAGTCCAGCAACCCTCAGTACACTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: IQTLIVQPCSSG*NSPATLSTLQG
Trigger: ACCCTGGAGTGTACTGAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGGGTCTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp CCAGATTCAGACCCTCATTGTACAGCCTTGCTCCTCTaGGTGGAACAGTCCAGCAACCCTCAGTACACTCCA +
Preference number: 3 (lower is better)
Translates to: PDSDPHCTALLL*VEQSSNPQYTP
Trigger: TGGAGTGTACTGAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp GAGGTCTGTTTTCACAAGTCACCTGGAGAACGCCTTTaGGGCAGTAGGGTTCACTGTGTAGGTCTTGGGGTC +
Preference number: 3 (lower is better)
Translates to: EVCFHKSPGERL*GSRVHCVGLGV
Trigger: GACCCCAAGACCTACACAGTGAACCCTACTGCCCCAAAGGCGTTCTCCAGGTGACTTGTGAAAACAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp GGGGTTAGGACACTGGCAGGAAGTCTGATTAGTTGCTaGGATGGTCCCATCCATGAAGCACTGGACACATGC +
Preference number: 3 (lower is better)
Translates to: GVRTLAGSLISC*DGPIHEALDTC
Trigger: GCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAATCAGACTTCCTGCCAGTGTCCTAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 72 bp TGGAGGAAGCCACAGTGTCTGAGATGGGATCTCATCTaGAACCCTGGAGCCGTGGCATTGCTTCCTTCTATG +
Preference number: 3 (lower is better)
Translates to: WRKPQCLRWDLI*NPGAVALLPSM
Trigger: CATAGAAGGAAGCAATGCCACGGCTCCAGGGTTTCAGATGAGATCCCATCTCAGACACTGTGGCTTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 72 bp GCTGACTGGATGGCCAGTAAAAAGATGCAGTGGAGGTaGGCTTTCCAGTTCATGGGAAGCTCCAAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: ADWMASKKMQWR*AFQFMGSSKQP
Trigger: AGGCTGCTTGGAGCTTCCCATGAACTGGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCATCCAGTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp ATTTACCATTTACTCAAGAAACATTTCTGGCATCCCTaGCAGGTGCCAGCGTGCCAGCGGAAGGGCAGCACA +
Preference number: 3 (lower is better)
Translates to: IYHLLKKHFWHP*QVPACQRKGST
Trigger: TGTGCTGCCCTTCCGCTGGCACGCTGGCACCTGGCAGGGATGCCAGAAATGTTTCTTGAGTAAATGGTAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR CAA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCATCTAGGCAGAGTGGGTaGTACGATGCCCAAAACCTT +
Preference number: 3 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPSRQSG*YDAQNL
Trigger: AAGGTTTTGGGCATCGTACAACCCACTCTGCCTAGA...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CAA 90 bp GGCAGCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCTCCTCCATTGCTAGCTTAGTGAAGCCTTaGGCTCAAGGAAGATTTCCA +
Preference number: 3 (lower is better)
Translates to: GSTGHRAFNNHISASSIASLVKP*AQGRFP
Trigger: TGGAAATCTTCCTTGAGCCAAAGGCTTCACTAAGCT...AGCAATGGAGGAGGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR GCA 72 bp GATGGGATCTCATCTGAAACCCTGGAGCCGTGGCATTaGTTCCTTCTATGTCAAGATAACGAAAGCCCGTGG +
Preference number: 3 (lower is better)
Translates to: DGISSETLEPWH*FLLCQDNESPW
Trigger: CCACGGGCTTTCGTTATCTTGACATAGAAGGAAGCAATGCCACGGCTCCAGGGTTTCAGATGAGATCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp TGCTGGGATGGTCCCATCCATGAAGCACTGGACACATaGTGGGAACCATCTGTGCATAAATCAGAAGAGCCA +
Preference number: 3 (lower is better)
Translates to: CWDGPIHEALDT*WEPSVHKSEEP
Trigger: TGGCTCTTCTGATTTATGCACAGATGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 72 bp TCTGAGCACACTACACAATGCTACGGAGGCCTCCAGTaGCACAGTATTTCCTACTCTTACACATCGGCTGAC +
Preference number: 3 (lower is better)
Translates to: SEHTTQCYGGLQ*HSISYSYTSAD
Trigger: GTCAGCCGATGTGTAAGAGTAGGAAATACTGTGTCACTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp CTTACACATCGGCTGACTGGATGGCCAGTAAAAAGATaGAGTGGAGGTGAGCTTTCCAGTTCATGGGAAGCT +
Preference number: 3 (lower is better)
Translates to: LTHRLTGWPVKR*SGGELSSSWEA
Trigger: AGCTTCCCATGAACTGGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCATCCAGTCAGCCGATGTGTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp AAGTATGCAGCTGCTTCAAATGCTGAGGACCACAACTaGTTTTGTTACAAAGGCCGCAGTGAGTGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: KYAAASNAEDHN*FCYKGRSECRL
Trigger: GAGCCTGCACTCACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGCATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CCA 72 bp TGGGATGGTCCCATCCATGAAGCACTGGACACATGCTaGGAACCATCTGTGCATAAATCAGAAGAGCCAACA +
Preference number: 3 (lower is better)
Translates to: WDGPIHEALDTC*EPSVHKSEEPT
Trigger: TGTTGGCTCTTCTGATTTATGCACAGATGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CAA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGCCTCATTGTACAGCCTaGCTCCTCTGGGTGGAACAG +
Preference number: 3 (lower is better)
Translates to: CINQKSQQEWEQERSANTPHCTA*LLWVEQ
Trigger: CTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGG...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp TCCATGAAGCACTGGACACATGCTGGGAACCATCTGTaGATAAATCAGAAGAGCCAACAAGAGTGGGAACAG +
Preference number: 3 (lower is better)
Translates to: SMKHWTHAGNHL*INQKSQQEWEQ
Trigger: CTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCACAGATGGTTCCCAGCATGTGTCCAGTGCTTCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR GCA 72 bp CCTCCAGCTCCCAACAGTTCTTTTGTGAACTCCAAGTaGATACTTCCAACTGCCTACTCAAGTTCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: PPAPNSSFVNSK*ILPTAYSSSLP
Trigger: TGGCAGAGAACTTGAGTAGGCAGTTGGAAGTATGCACTTGGAGTTCACAAAAGAACTGTTGGGAGCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR CAA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAAATACGCATATGGACTaGAAGATACAACACCAGCTC +
Preference number: 3 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPNTHMD*KIQHQL
Trigger: GAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATT...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CAA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACCCTCATTGTACAGCCTaGCTCCTCTGGGTGGAACAG +
Preference number: 3 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYPHCTA*LLWVEQ
Trigger: CTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGG...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CAA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGTCTAGGCAGAGTGGGTaGTACGATGCCCAAAACCTT +
Preference number: 3 (lower is better)
Translates to: CINQKSQQEWEQERSANTSRQSG*YDAQNL
Trigger: AAGGTTTTGGGCATCGTACAACCCACTCTGCCTAGA...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR-3UTR CAA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACGAGGAGGACTCTGGTTaGATTTCCCAATTCCACAGC +
Preference number: 3 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYEEDSG*ISQFHS
Trigger: GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTC...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 72 bp GGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTaGAGATACAACACCAGCTCAGGTAATATACAGCAG +
Preference number: 3 (lower is better)
Translates to: GNRKGLQIRIWT*RYNTSSGNIQQ
Trigger: CTGCTGTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR TCA 72 bp ATAAATCGACACCTCCAGCTCCCAACAGTTCTTTTGTaGACTCCAAGTGCATACTTCCAACTGCCTACTCAA +
Preference number: 3 (lower is better)
Translates to: INRHLQLPTVLL*TPSAYFQLPTQ
Trigger: TTGAGTAGGCAGTTGGAAGTATGCACTTGGAGTTCACAAAAGAACTGTTGGGAGCTGGAGGTGTCGATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR GCA 72 bp CCAAGTGCATACTTCCAACTGCCTACTCAAGTTCTCTaGCAAAAGTACCCAAGACAGCTCAAATTCTACCAA +
Preference number: 3 (lower is better)
Translates to: PSAYFQLPTQVL*QKYPRQLKFYQ
Trigger: TTGGTAGAATTTGAGCTGTCTTGGGTACTTTTGGCAGAGAACTTGAGTAGGCAGTTGGAAGTATGCACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
3UTR-3UTR CAA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAAGACCTAAGGACAAATaGAATTCAGTGCTAAACCAT +
Preference number: 3 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPRPKDK*NSVLNH
Trigger: ATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCT...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCGAGCAGGCATCGAGGTaGCCTCTCCGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVEQASR*PLRCRR
Trigger: GCGGCGGCACCGGAGAGGGCACCTCGATGCCTGCTC...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTGCAGGGTAAGGGGGTaGCGGCGACACCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGCRVRG*RRHLGL
Trigger: CAAGCCCAGGTGTCGCCGCCACCCCCTTACCCTGCA...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGCAGGCTCACGTGCTGTaGGCCAGGGCGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSEQAHVL*ARATLP
Trigger: GGGCAGGGTCGCCCTGGCCCACAGCACGTGAGCCTG...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGGTCGGTCATGAGCTaGTCGAAGGCCCGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVRSVMS*SKARVS
Trigger: GGAGACGCGGGCCTTCGAGCAGCTCATGACCGACCT...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCTTGGGGTCTCTGTTaGCAGGCAGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGSWGLC*QAGWLL
Trigger: CAGCAGCCACCCTGCCTGGCAACAGAGACCCCAAGA...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGGGGAGACGGCGGCCGTaGGGCCTGTACCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQGRRRP*GLYLGP
Trigger: TGGGCCGAGGTACAGGCCCCACGGCCGCCGTCTCCC...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTGGAGTCTGGCAGGATaGTGTTCGGGAGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGWSLAG*CSGDSR
Trigger: GCGGGAGTCTCCCGAACACCATCCTGCCAGACTCCA...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420329.6
CDS-3UTR TCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGGGCCAGTGGGCTGGTTaGAGACAGCTGTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGGQWAG*RQLSAE
Trigger: TTCAGCAGACAGCTGTCTTCAACCAGCCCACTGGCC...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGGAAGTTGGTCAAAGATaGGCCCTGGGCCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGEVGQR*ALGREK
Trigger: CTTCTCCCGGCCCAGGGCTCATCTTTGACCAACTTC...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGACCAGAGGCACCTGTTaGGGAAAGGCAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSETRGTC*GKAGPG
Trigger: GCCAGGCCCTGCCTTTCCTCAACAGGTGCCTCTGGT...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCCCATGGCGCGGACTCTaGGCGGGCAGAAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGPWRGL*AGRSGR
Trigger: TCTCCCGCTTCTGCCCGCGCAGAGTCCGCGCCATGG...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGGCCAGGCAGGGTGGCTaGTGTGCAGACAAACTGAAC +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGARQGG*CADKLN
Trigger: GTTCAGTTTGTCTGCACAGCAGCCACCCTGCCTGGC...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCGAAGATCTTCCTGGGTaGGGCCCAGCCAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVEDLPG*GPARML
Trigger: GAGCATCCTGGCTGGGCCCCACCCAGGAAGATCTTC...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACCTCTCCACCAGCCCGTaGTGGCGGGTTCCCCGAACA +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHLSTSP*WRVPRT
Trigger: TGTTCGGGGAACCCGCCATCACGGGCTGGTGGAGAG...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACGGGGCCCAGCCAGGATaGTCAGGGCACTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHGAQPG*SGHSPA
Trigger: AGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCCC...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GCCAGGTGCCAGCGTGCCAGCGGAAGGGCAGCACAGGTCACAGGGCTTTTAACAGGCATCCCTGCCAGGTaGCAGCGTGCCAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARCQRASGRAAQVTGLLTGIPAR*QRASGR
Trigger: CCTTCCGCTGGCACGCTGGCACCTGGCAGGGATGCC...TGTTAAAAGCCCTGTGACCTGTGCTGCCCTTCCGCTGGCACGCTGGCACCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGAGGAAAGGCAGGGCCTaGCCTCATGGACTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSERKGRA*PHGLLV
Trigger: GACCAGCAGTCCATGAGGCCAGGCCCTGCCTTTCCT...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGGGAGACTCCCGCAGTTaGAATACGGGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGGDSRS*NTGLVS
Trigger: TGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCC...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATGGGAATGTCCCCCGCTaGAGGGCCTCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GKGIATGEPALRHGGRTHGNVPR*RASPSG
Trigger: CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCC...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCCCTTGCTCCTCTGGGTaGAACAGTCCAGCAACCCTC +
Preference number: 4 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVPCSSG*NSPATL
Trigger: GAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGG...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGGAAGTTGGTCAAAGATaGGCCCTGGGCCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSEEVGQR*ALGREK
Trigger: CTTCTCCCGGCCCAGGGCTCATCTTTGACCAACTTC...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTTGTCCACGTTCAGGCTaGCCTCAGGCAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTCPRSG*PQAGLP
Trigger: TGGCAGGCCTGCCTGAGGTCAGCCTGAACGTGGACA...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGCACTGGCAGGAAGTCTaGTTAGTTGCTGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGHWQEV*LVAGMV
Trigger: GACCATCCCAGCAACTAATCAGACTTCCTGCCAGTG...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCCGCACTCATTCATCATaGGCTGCACGCACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVRTHSS*AARTVL
Trigger: CAGAACCGTGCGTGCAGCGCATGATGAATGAGTGCG...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGAGGGGTCCTGGGGCTTaGTACTCAGAGCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSERGPGA*YSEHSC
Trigger: ACACGAGTGCTCTGAGTACCAAGCCCCAGGACCCCT...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTGGTGTCCAGGGAGGCTaGCAGGGGTGTCGAGTAGTG +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTGVQGG*QGCRVV
Trigger: CACTACTCGACACCCCTGCCAGCCTCCCTGGACACC...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCCAGCGGAAGGGCAGCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCAGCAGGTGGAGGGGGTaGCGGGAGCCTCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: CQRKGSTGHRAFNNHISASRWRG*REPPGT
Trigger: TGTGCCCGGAGGCTCCCGCCACCCCCTCCACCTGCT...GGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGCTGCCCTTCCGCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR TCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACGGCGACACCTGGGCTTaGGCTTCTGTGGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHGDTWA*ASVGRK
Trigger: CTTTCTGCCCACAGAAGCTCAAGCCCAGGTGTCGCC...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGCCAGCAGGCCCTTCCTaGGCTGGAAATCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQPAGPS*AGNQAR
Trigger: CCTCGCCTGATTTCCAGCTCAGGAAGGGCCTGCTGG...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGAGGTCGGTCATGAGCTaGTCGAAGGCCCGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQRSVMS*SKARVS
Trigger: GGAGACGCGGGCCTTCGAGCAGCTCATGACCGACCT...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGCGCACTCATTCATCATaGGCTGCACGCACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSERTHSS*AARTVL
Trigger: CAGAACCGTGCGTGCAGCGCATGATGAATGAGTGCG...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTAAAGGCCGCAGTGAGTaGAGGCTCACGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTKGRSE*RLTCCG
Trigger: CCCACAGCACGTGAGCCTGCACTCACTGCGGCCTTT...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGCATCTGGGAAGAAGTTaGTCAAAGATGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGHLGRS*SKMSPG
Trigger: CCCAGGGCTCATCTTTGACCAACTTCTTCCCAGATG...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGGTCGTAATCCAGGCGTaGGAGAGAGCCGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQVVIQA*ERAVGS
Trigger: GGACCCCACGGCTCTCTCCCACGCCTGGATTACGAC...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCGGAGCTGGTTTCTTTTaGCACATGGGGTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVGAGFF*HMGCWV
Trigger: TACCCAGCACCCCATGTGCCAAAAGAAACCAGCTCC...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGCCATCCATGAAGCACTaGACACATGCTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGPSMKH*THAGNH
Trigger: ATGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGG...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGTAGAGAGCCCCTGTCCTCCATGCTCGCCTTGGCCAATCGCATCCTTCCCTCGCGTCCTGATGTTCCCTaGGGTCCTGTGGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GREPLSSMLALANRILPSRPDVP*GPVASQ
Trigger: CTGCGAGGCCACAGGACCCCAGGGAACATCAGGACG...CGAGGGAAGGATGCGATTGGCCAAGGCGAGCATGGAGGACAGGGGCTCTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACGCCTGTCTCTGCGTGTaGAGCGCGATCTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHACLCV*SAIFSL
Trigger: CAGTGAGAAGATCGCGCTGCACACGCAGAGACAGGC...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCCTCAGGGCACTCACCTaGTCAGCCCTTCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGLRALT*SALPDV
Trigger: TACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAG...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTACAGAAACCCATGTATaGGGCAGGCCAGGCCGACTG +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTTETHV*GRPGRL
Trigger: CAGTCGGCCTGGCCTGCCCCATACATGGGTTTCTGT...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTAGTCTTCTGGCAGGATaGTGTTCGGGAGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTSLLAG*CSGDSR
Trigger: GCGGGAGTCTCCCGAACACCATCCTGCCAGAAGACT...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268184.11
CDS-3UTR CCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACGCCTGCCTTACGGCATaGCGGACGCACTCATTCATC +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHACLTA*RTHSFI
Trigger: GATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGC...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCCACTCCAGGGTCTCCTaGAAGGGCAATGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGHSRVS*KGNGCP
Trigger: TGGACAGCCATTGCCCTTCCAGGAGACCCTGGAGTG...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCTTGAACAGGGTGCCCTaGGGGTTAGGACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGLNRVP*GLGHWQ
Trigger: CTGCCAGTGTCCTAACCCCCAGGGCACCCTGTTCAA...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACAAGTTGGCTTCGGTCTaGGGACACCATCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHKLASV*GHHLGG
Trigger: ACCTCCCAGATGGTGTCCTCAGACCGAAGCCAACTT...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGAAAGGTGTACTTTTCTaGAGCAGCAGAAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGKGVLF*SSRNQL
Trigger: CAGCTGGTTTCTGCTGCTTCAGAAAAGTACACCTTT...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACACTGGGACCCGGATATaGCGATACCCATGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHTGTRI*RYPWVR
Trigger: CCTTACCCATGGGTATCGTCATATCCGGGTCCCAGT...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGCTGCTTCAAATGCTaGGGACCACAACTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVSCFKC*GPQLVL
Trigger: CAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCT...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTGGATGGTCCCATCCATaGAGCACTGGACACATGCTG +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTGWSHP*STGHML
Trigger: CAGCATGTGTCCAGTGCTTCATGGATGGGACCATCC...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGTAGAGAGCCCCTGTCCTCCATGCTCGCCTTGGCCAATCGCATCCTTCCCTCGCTCAACCTGAAACTCTaGCGCACTGCTCCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GREPLSSMLALANRILPSLNLKL*RTAPQL
Trigger: CAGCTGCGGAGCAGTGCGTCAGAGTTTCAGGTTGAG...CGAGGGAAGGATGCGATTGGCCAAGGCGAGCATGGAGGACAGGGGCTCTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGGCTGAAACCTTGATGTaGTTCAGGGCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSEAETLM*FRARRK
Trigger: CTTTCTCCTGGCCCTGAAGCACATCAAGGTTTCAGC...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCGCAGGGTGGCTGCTGTaGAGACAAACTGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGAGWLL*RQTELG
Trigger: TCCCAGTTCAGTTTGTCTGCACAGCAGCCACCCTGC...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCTTGGGGTCTCTGTTaGCAGGCAGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GKGIATGEPALRHGGRTHSWGLC*QAGWLL
Trigger: CAGCAGCCACCCTGCCTGGCAACAGAGACCCCAAGA...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGGGGAGACGGCGGCCGTaGGGCCTGTACCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLGRRRP*GLYLGP
Trigger: TGGGCCGAGGTACAGGCCCCACGGCCGCCGTCTCCC...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTGTGGTGGAAAGAGATaGGTTGCTAAGGGAAAACAG +
Preference number: 4 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGCGGKR*VAKGKQ
Trigger: CTGTTTTCCCTTAGCAACCCATCTCTTTCCACCACA...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTGGCCGCTCAGGTTTGTaGTGGAAAGAGATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTGRSGL*WKEMGC
Trigger: GCAACCCATCTCTTTCCACCACAAACCTGAGCGGCC...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGGAGGGCCTCGCCCTCTaGGTCAGGTCAGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKEGLAL*VRSEQA
Trigger: TGCCTGCTCTGACCTGACCCAGAGGGCGAGGCCCTC...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGACAGAGACACAGCTCTaGGGAGGGATGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQTETQL*GGMGKL
Trigger: GAGCTTCCCCATCCCTCCCCAGAGCTGTGTCTCTGT...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGAGAGGAGGCAGGCGGTaGTGGAAATCTGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQRGGRR*WKSGPS
Trigger: AGATGGGCCAGATTTCCACCACCGCCTGCCTCCTCT...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGCACTCCAGGGTCTCCTaGAAGGGCAATGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQHSRVS*KGNGCP
Trigger: TGGACAGCCATTGCCCTTCCAGGAGACCCTGGAGTG...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGAGGCCCTTCCTGAGCTaGAAATCAGGCGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQRPFLS*KSGEED
Trigger: GTCCTCCTCGCCTGATTTCCAGCTCAGGAAGGGCCT...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCCTGGAGAACGCCTTTaGGGCAGTAGGGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTPGERL*GSRVHC
Trigger: ACAGTGAACCCTACTGCCCCAAAGGCGTTCTCCAGG...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCGCACTGGACACATGCTaGGAACCATCTGTGCATAAA +
Preference number: 4 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVALDTC*EPSVHK
Trigger: TTTATGCACAGATGGTTCCCAGCATGTGTCCAGTGC...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGGAAAAGCTAAAGCTCTaGGAAGATCTGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSEEKLKL*EDLAGK
Trigger: CTTCCCTGCCAGATCTTCTCAGAGCTTTAGCTTTTC...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGCCAGCAGGCCCTTCCTaGGCTGGAAATCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKPAGPS*AGNQAR
Trigger: CCTCGCCTGATTTCCAGCTCAGGAAGGGCCTGCTGG...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTTACAAAGGCCGCAGTaGGTGCAGGCTCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: GKGIATGEPALRHGGRTHLQRPQ*VQAHVL
Trigger: CAGCACGTGAGCCTGCACTCACTGCGGCCTTTGTAA...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACGGTCCAGCAGGCCCATaGTGGAGTCACTTAACATGT +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHGPAGP*WSHLTC
Trigger: ACATGTTAAGTGACTCCAGCATGGGCCTGCTGGACC...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTCGGGCCCGCCTTCGGTaGGGACGGAGATCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLRARLR*GRRSVV
Trigger: AACCACTGATCTCCGTCCGCACCGAAGGCGGGCCCG...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAGAGCAGGCATCGAGGTaGCCTCTCCGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPEQASR*PLRCRR
Trigger: GCGGCGGCACCGGAGAGGGCACCTCGATGCCTGCTC...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCTCATTCATCATGCGCTaGACGCACGGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGSFIMR*THGSAA
Trigger: TGCTGCAGAACCGTGCGTGCAGCGCATGATGAATGA...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGAGTGCAGGCTCACGTaGTGTGGGCCAGGGCGACCC +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPECRLT*CGPGRP
Trigger: GGGTCGCCCTGGCCCACAGCACGTGAGCCTGCACTC...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TGCCAGCGGAAGGGCAGCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCGCCTCAGGCCACACCTaGCTGCATTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CQRKGSTGHRAFNNHISAASGHT*LHCSER
Trigger: CCTCTCAGAGCAATGCAGGCAGGTGTGGCCTGAGGC...GGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGCTGCCCTTCCGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp GCGTGCCAGCGGAAGGGCAGCACAGGTCACAGGGCTTTTAACAACCACATCAGCCATTTCTGGCATCCCTaGCAGGTGCCAGCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: ACQRKGSTGHRAFNNHISHFWHP*QVPACQ
Trigger: CTGGCACGCTGGCACCTGGCAGGGATGCCAGAAATG...GCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGCTGCCCTTCCGCTGGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGGGTGGAAGCGGTTCCTaGATGGCCTCTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKGGSGS*MASPPA
Trigger: GGCTGGTGGAGAGGCCATCCAGGAACCGCTTCCACC...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGTCTGAGGACACCATCTaGGAGGTAGGATATGGGGCC +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQSEDTI*EVGYGA
Trigger: GGCCCCATATCCTACCTCCCAGATGGTGTCCTCAGA...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGGCCCGTGGTATCAGCTaGCTTCATTCTATTCCATTC +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSEARGIS*LHSIPF
Trigger: GAATGGAATAGAATGAAGCCAGCTGATACCACGGGC...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CAA 72 bp GGAAGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTaGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GSSKQPACCNTT*ATGGRGSTKLC
Trigger: ACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCCCCACACTCATACTaGCAAAGTGGTGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GKGIATGEPALRHGGRTHSPHSY*QSGGRW
Trigger: CCACCGACCACCACTTTGGCAGTATGAGTGTGGGGA...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACCTTCAGGCTCATCAGTaGCAGGGGACTCTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHLQAHQ*QGTLFS
Trigger: ACTGAAAAGAGTCCCCTGGCACTGATGAGCCTGAAG...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCGAGTGCAGGCTCACGTaGTGTGGGCCAGGGCGACCC +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSECRLT*CGPGRP
Trigger: GGGTCGCCCTGGCCCACAGCACGTGAGCCTGCACTC...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTGAAGAGCAGATGCGTTaGGAACAGATGTCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTEEQMR*EQMSVG
Trigger: ACCCACAGACATCTGTTCCCAACGCATCTGCTCTTC...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCATCTGGGAAGAAGTTaGTCAAAGATGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTHLGRS*SKMSPG
Trigger: CCCAGGGCTCATCTTTGACCAACTTCTTCCCAGATG...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAGTCGTAATCCAGGCGTaGGAGAGAGCCGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEAVVIQA*ERAVGS
Trigger: GGACCCCACGGCTCTCTCCCACGCCTGGATTACGAC...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCGGCTTCACTGTGATTTaGTCACCTAGTGTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVGFTVI*SPSVKS
Trigger: GCTTTTAACACTAGGTGACCAAATCACAGTGAAGCC...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATACAGCCTTGCTCCTCTaGGTGGAACAGTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GKGIATGEPALRHGGRTHTALLL*VEQSSN
Trigger: GTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGT...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCCTCAGAGCACTCGTGTaGAGAGCAGAATCAGAATTG +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGLRALV*RAESEL
Trigger: CAATTCTGATTCTGCTCTTCACACGAGTGCTCTGAG...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGGGATCGAGGGCGTCCTaGCAGGGACTGAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKGSRAS*QGLNLL
Trigger: AAGGAGATTCAGTCCCTGTCAGGACGCCCTCGATCC...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGGGCCAGTGGGCTGGTTaGAGACAGCTGTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQGQWAG*RQLSAE
Trigger: TTCAGCAGACAGCTGTCTTCAACCAGCCCACTGGCC...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTAAGATAGAAATGGAATaGGGTCGGGAGAGGCTAACC +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTKIEME*GRERLT
Trigger: GGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTT...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGTGGGCCAGGGAAAGATaGTACTTCCCCATGTCCATT +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQWARER*YFPMSI
Trigger: AATGGACATGGGGAAGTAGCATCTTTCCCTGGCCCA...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGGCTGAAACCTTGATGTaGTTCAGGGCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQAETLM*FRARRK
Trigger: CTTTCTCCTGGCCCTGAAGCACATCAAGGTTTCAGC...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCGGGGCCCAGCCAGGATaGTCAGGGCACTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSGAQPG*SGHSPA
Trigger: AGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCCC...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCATAAGGGACAGGTGTaGCAGATTCAGACCCTCATT +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTHKGQV*QIQTLI
Trigger: AATGAGGGTCTGAATCTGGCACACCTGTCCCTTATG...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCTGTTCCTCTTCTTATAGTCCATCTCATTTAGTGAGGCCACCGTCCACCAAGGGGAGACGGCGGCCGTaGGGCCTGTACCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ICSSSYSPSHLVRPPSTKGRRRP*GLYLGP
Trigger: TGGGCCGAGGTACAGGCCCCACGGCCGCCGTCTCCC...CTTGGTGGACGGTGGCCTCACTAAATGAGATGGACTATAAGAAGAGGAACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGAAGCGGTTCCTGGATaGCCTCTCCACCAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPAEAVPG*PLHQPV
Trigger: CACGGGCTGGTGGAGAGGCCATCCAGGAACCGCTTC...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCGGTGGAAGCGGTTCCTaGATGGCCTCTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFGGSGS*MASPPA
Trigger: GGCTGGTGGAGAGGCCATCCAGGAACCGCTTCCACC...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCCTTCGGTGGAGGGGGTaGAAGCGGTTCCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFLRWRG*KRFLDG
Trigger: GCCATCCAGGAACCGCTTCCACCCCCTCCACCGAAG...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTGGGACTGAATCTCCTTaGTCTCCCACAGTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTGTESP*SPTVVL
Trigger: CAAAACAACTGTGGGAGACCAAGGAGATTCAGTCCC...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCGGGACTGAATCTCCTTaGTCTCCCACAGTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGGTESP*SPTVVL
Trigger: CAAAACAACTGTGGGAGACCAAGGAGATTCAGTCCC...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCTTACTCCGAGAACTCTaGAGACCAGAGGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGLLREL*RPEELL
Trigger: AAGAAGCTCCTCTGGTCTCCAGAGTTCTCGGAGTAA...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGCAGGGCCTGGCCTCATaGACTGCTGGTCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKQGLAS*TAGQNP
Trigger: TGGGTTTTGACCAGCAGTCCATGAGGCCAGGCCCTG...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCACAGGGCCTGGCCTCATaGACTGCTGGTCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSQGLAS*TAGQNP
Trigger: TGGGTTTTGACCAGCAGTCCATGAGGCCAGGCCCTG...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCGATAACGAAAGCCCGTaGTATCAGCTGGCTTCATTC +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGDNESP*YQLASF
Trigger: GAATGAAGCCAGCTGATACCACGGGCTTTCGTTATC...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCCATCGGCTGACTGGATaGCCAGTAAAAAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGHRLTG*PVKRCS
Trigger: ACTGCATCTTTTTACTGGCCATCCAGTCAGCCGATG...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTTGTCTGGAGTTTGTCTaGAGGCCACTGAGTATGAGA +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTCLEFV*RPLSMR
Trigger: TCTCATACTCAGTGGCCTCCAGACAAACTCCAGACA...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGAGAGGAGGCAGGCGGTaGTGGAAATCTGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQRGGRR*WKSGPS
Trigger: AGATGGGCCAGATTTCCACCACCGCCTGCCTCCTCT...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTGCAGACAAACTGAACTaGGACCCGGATATGACGATA +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTADKLN*DPDMTI
Trigger: TATCGTCATATCCGGGTCCCAGTTCAGTTTGTCTGC...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTCGTCCTGACAGGGACTaGATCTCCTTGGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLRPDRD*ISLVSH
Trigger: GTGGGAGACCAAGGAGATTCAGTCCCTGTCAGGACG...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTAGACGGAGCGAAGGGTaGAGAGCAGATGCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLRRSEG*RADALG
Trigger: TCCCAACGCATCTGCTCTTCACCCTTCGCTCCGTCT...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCACCAGAGGCACCTGTTaGGGAAAGGCAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSTRGTC*GKAGPG
Trigger: GCCAGGCCCTGCCTTTCCTCAACAGGTGCCTCTGGT...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCAAGATGGGATCTCATCTaGAACCCTGGAGCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSRWDLI*NPGAVA
Trigger: TGCCACGGCTCCAGGGTTTCAGATGAGATCCCATCT...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACCCAGCTGGGAGAAAATaGAAATTAGCCTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHPAGRK*KLAFSL
Trigger: CAGACTGAAGGCTAATTTTCATTTTCTCCCAGCTGG...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGAGCTGCTTCAAATGCTaGGGACCACAACTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQSCFKC*GPQLVL
Trigger: CAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCT...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp ATTGCTCTGAGAGGCAAAGGATGCTCTCAGGATCCCTGGGCACCAGGCAGAGTGCTGCCTGCATTGCTCTaGGAGGCAAAGGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: IALRGKGCSQDPWAPGRVLPALL*EAKDAL
Trigger: GAGAGCATCCTTTGCCTCTCAGAGCAATGCAGGCAG...CACTCTGCCTGGTGCCCAGGGATCCTGAGAGCATCCTTTGCCTCTCAGAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGTGGCCAGTAAAAAGATaGAGTGGAGGTGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQWPVKR*SGGELS
Trigger: GGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCA...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCCAGCGGAAGGGCAGCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCGCACTGCTCCGCAGCTaGCTCACATTTGGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: CQRKGSTGHRAFNNHISAALLRS*LTFGKD
Trigger: ATCCTTACCAAATGTGAGCCAGCTGCGGAGCAGTGC...GGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGCTGCCCTTCCGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGTCCCCAGACCTTCGGTaGAGGGGGTGGAAGCGGTTC +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLSPDLR*RGWKRF
Trigger: GAACCGCTTCCACCCCCTCCACCGAAGGTCTGGGGA...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCAGGCCTCATGGACTGCTaGTCAAAACCCACATCTGGG +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSGLMDC*SKPTSG
Trigger: CCCAGATGTGGGTTTTGACCAGCAGTCCATGAGGCC...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATCTCTTCCAGTGGAAATaGAGTGTCCACGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GKGIATGEPALRHGGRTHLFQWK*SVHVQA
Trigger: AGCCTGAACGTGGACACTCCATTTCCACTGGAAGAG...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTTACACATCGGCTGACTaGATGGCCAGTAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTYTSAD*MASKKM
Trigger: CATCTTTTTACTGGCCATCCAGTCAGCCGATGTGTA...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCTCCCACCCACCCGCGTaGAGCACAGCCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSSHPPA*STAQGE
Trigger: TTCTCCTTGGGCTGTGCTCCACGCGGGTGGGTGGGA...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAGAAGGAAGATCTTCCTaGGTGGGGCCCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEAEGRSS*VGPSQD
Trigger: ATCCTGGCTGGGCCCCACCCAGGAAGATCTTCCTTC...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGTGTTGCCAGGCAGGGTaGCTGCTGTGCAGACAAACT +
Preference number: 4 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQCCQAG*LLCRQT
Trigger: AGTTTGTCTGCACAGCAGCCACCCTGCCTGGCAACA...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGGTGCAGATGTCAGCCTaGACCCAGGATGCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKVQMSA*TQDAFR
Trigger: ACGAAAAGCATCCTGGGTTCAGGCTGACATCTGCAC...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAGGCGACACCTGGGCTTaGGCTTCTGTGGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPGDTWA*ASVGRK
Trigger: CTTTCTGCCCACAGAAGCTCAAGCCCAGGTGTCGCC...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCACACTGGCAGGAAGTCTaGTTAGTTGCTGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSHWQEV*LVAGMV
Trigger: GACCATCCCAGCAACTAATCAGACTTCCTGCCAGTG...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGCCTGGCCTCATGGACTaGTGGTCAAAACCCACATCT +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKPGLMD*WSKPTS
Trigger: AGATGTGGGTTTTGACCAGCAGTCCATGAGGCCAGG...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGGGTCCAGCAGGCCCATaGTGGAGTCACTTAACATGT +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKGPAGP*WSHLTC
Trigger: ACATGTTAAGTGACTCCAGCATGGGCCTGCTGGACC...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGAAGCTCCAAGCAGCCTaGCTGCTGCAACACGACTTT +
Preference number: 4 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQKLQAA*LLQHDF
Trigger: AAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCTT...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGTGCCTAACTCAAGCCTaGCCTCGGGCTTGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKCLTQA*PRACGK
Trigger: TTTACCACAAGCCCGAGGGCAGGCTTGAGTTAGGCA...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCCTCAGGGCACTCACCTaGTCAGCCCTTCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFLRALT*SALPDV
Trigger: TACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAG...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCGGAACAGGAAAGGTCTaGAAATACGCATATGGACTT +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGGTGKV*KYAYGL
Trigger: AAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCC...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp AGTGCCCGTCTTCCTGGTAGAGAGCCCCTGTCCTCCATGCTCGCCTTGGCCAATCATCAACACAGGGACTaGTGTTCCTCTCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: SARLPGREPLSSMLALANHQHRD*CSSQPE
Trigger: TTCAGGTTGAGAGGAACAGCAGTCCCTGTGTTGATG...ATTGGCCAAGGCGAGCATGGAGGACAGGGGCTCTCTACCAGGAAGACGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCAGCACTGCTCCGCAGCTaGCTCACATTTGGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSALLRS*LTFGKD
Trigger: ATCCTTACCAAATGTGAGCCAGCTGCGGAGCAGTGC...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCAATCAAATTGTCGCCCTaGCTTGTCCCCAGACCTTCG +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSIKLSP*LVPRPS
Trigger: CGAAGGTCTGGGGACAAGCCAGGGCGACAATTTGAT...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp AGCTCCAAGCAGCCTGCCTGCTGCAACACGACTTTGGCCACAGGCGGGAGAGGCGCTGTGAGGAATAATTaGCTCCAAAAGCACTACCAT +
Preference number: 4 (lower is better)
Translates to: SSKQPACCNTTLATGGRGAVRNN*LQKHYH
Trigger: ATGGTAGTGCTTTTGGAGCCAATTATTCCTCACAGC...GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTAGGAGGCTGCTGCCTTaGCCAACTCTCATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPRRLLP*PTLIQR
Trigger: CCTCTGGATGAGAGTTGGCCAAGGCAGCAGCCTCCT...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCAGGAGGCTGCTGCCTTaGCCAACTCTCATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFRRLLP*PTLIQR
Trigger: CCTCTGGATGAGAGTTGGCCAAGGCAGCAGCCTCCT...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTACAGAAACCCATGTATaGGGCAGGCCAGGCCGACTG +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPTETHV*GRPGRL
Trigger: CAGTCGGCCTGGCCTGCCCCATACATGGGTTTCTGT...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGGTGGGTCATAGCAGCTaGGATGTTGTTCACACTATT +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQVGHSS*DVVHTI
Trigger: AATAGTGTGAACAACATCCCAGCTGCTATGACCCAC...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTGGCCGCTCAGGTTTGTaGTGGAAAGAGATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLGRSGL*WKEMGC
Trigger: GCAACCCATCTCTTTCCACCACAAACCTGAGCGGCC...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTGTCAAAACCCACATCTaGGAAGAAGTTGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTVKTHI*EEVGQR
Trigger: TCTTTGACCAACTTCTTCCCAGATGTGGGTTTTGAC...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAGGAGACTCCCGCAGTTaGAATACGGGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEAGDSRS*NTGLVS
Trigger: TGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCC...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCGAAGGAAGATCTTCCTaGGTGGGGCCCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFEGRSS*VGPSQD
Trigger: ATCCTGGCTGGGCCCCACCCAGGAAGATCTTCCTTC...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCATGGCACATGGGGTGCTaGGTAGCATTGCGACTGAAG +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEAWHMGC*VALRLK
Trigger: CTTCAGTCGCAATGCTACCCAGCACCCCATGTGCCA...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCAGGAGCTGGTTTCTTTTaGCACATGGGGTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSGAGFF*HMGCWV
Trigger: TACCCAGCACCCCATGTGCCAAAAGAAACCAGCTCC...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGCAGGCTCACGTGCTGTaGGCCAGGGCGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTQAHVL*ARATLP
Trigger: GGGCAGGGTCGCCCTGGCCCACAGCACGTGAGCCTG...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGGTGAGAGTAGTACAATaGTCGATTTCTTGTGACAAA +
Preference number: 4 (lower is better)
Translates to: SAWECPPLEGLALWVRSEVRVVQ*SISCDK
Trigger: TTTGTCACAAGAAATCGACCATTGTACTACTCTCAC...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CAA 72 bp ACAGGTGTGCCAGATTCAGACCCTCATTGTACAGCCTaGCTCCTCTGGGTGGAACAGTCCAGCAACCCTCAG +
Preference number: 4 (lower is better)
Translates to: TGVPDSDPHCTA*LLWVEQSSNPQ
Trigger: CTGAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCTGGCACACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGGGATCGAGGGCGTCCTaGCAGGGACTGAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLGSRAS*QGLNLL
Trigger: AAGGAGATTCAGTCCCTGTCAGGACGCCCTCGATCC...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGAAAGCACAGTCTTATTaGGCGTGGCTTGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKKAQSY*AWLGWR
Trigger: CCTCCATCCAAGCCACGCTCAATAAGACTGTGCTTT...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGAGACGGAGCGAAGGGTaGAGAGCAGATGCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLRRSEG*RADALG
Trigger: TCCCAACGCATCTGCTCTTCACCCTTCGCTCCGTCT...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGTTACAAAGGCCGCAGTaGGTGCAGGCTCACGTGCTG +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLLQRPQ*VQAHVL
Trigger: CAGCACGTGAGCCTGCACTCACTGCGGCCTTTGTAA...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGAAACTCTGACGCACTaGTCCGCAGCTGGCTCACAT +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPETLTH*SAAGSH
Trigger: ATGTGAGCCAGCTGCGGAGCAGTGCGTCAGAGTTTC...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCTCCTCCATTGCTTCCTGAAACTCTGACGCACTaGTCCGCAGCTGGCTCACAT +
Preference number: 4 (lower is better)
Translates to: AQVTGLLTTTSAPPPLLPETLTH*SAAGSH
Trigger: ATGTGAGCCAGCTGCGGAGCAGTGCGTCAGAGTTTC...AGGAAGCAATGGAGGAGGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTTCTTTCCAAGGAGGCTaGTGCCTTGGCCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLSFQGG*CLGQLS
Trigger: TGAGAGTTGGCCAAGGCAGCAGCCTCCTTGGAAAGA...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCTCCAAGCAGCCTGCCTaGTGCAACACGACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSSKQPA*CNTTLA
Trigger: GGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGA...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTAAAGGCCGCAGTGAGTaGAGGCTCACGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSKGRSE*RLTCCG
Trigger: CCCACAGCACGTGAGCCTGCACTCACTGCGGCCTTT...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp ATTGCTCTGAGAGGCAAAGGATGCTCTCAGGATCCCTGGGCACCAGGCAGAGTGGCCTCTGCAGTTCTGTaGAGGAAAATCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IALRGKGCSQDPWAPGRVASAVL*RKIFLL
Trigger: GAGGAGGAAGATTTTCCTGCACAGAACTGCAGAGGC...CACTCTGCCTGGTGCCCAGGGATCCTGAGAGCATCCTTTGCCTCTCAGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTATCAAATTGTCGCCCTaGCTTGTCCCCAGACCTTCG +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLIKLSP*LVPRPS
Trigger: CGAAGGTCTGGGGACAAGCCAGGGCGACAATTTGAT...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAGGGCTTGAGCTTCTGTaGGCAGAAAGGAAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEAGLELL*AERKVG
Trigger: GCCAACTTTCCTTTCTGCCCACAGAAGCTCAAGCCC...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAGGTGCTGGAGTCTTCTaGCAGGATGGTGTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPGAGVF*QDGVRE
Trigger: CTCCCGAACACCATCCTGCCAGAAGACTCCAGCACC...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268184.11
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCATCTCATCTGAAACCCTaGAGCCGTGGCATTGCTTCC +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEASHLKP*SRGIAS
Trigger: GGAAGCAATGCCACGGCTCCAGGGTTTCAGATGAGA...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTGCTGCAACACGACTTTaGCCACAGGCGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSAATRL*PQAGEA
Trigger: TGCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGC...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATGCGGTGGTGGAAATCTaGCCCATCTATTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: GKGIATGEPALRHGGRTHAVVEI*PIYFMR
Trigger: TCTCATAAAATAGATGGGCCAGATTTCCACCACCGC...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGAGGCCCTTCCTGAGCTaGAAATCAGGCGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLRPFLS*KSGEED
Trigger: GTCCTCCTCGCCTGATTTCCAGCTCAGGAAGGGCCT...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTTGTTGCCAGGCAGGGTaGCTGCTGTGCAGACAAACT +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPCCQAG*LLCRQT
Trigger: AGTTTGTCTGCACAGCAGCCACCCTGCCTGGCAACA...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCATCACTGTGTAGGTCTTaGGGTCTCTGTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEASLCRS*GLCCQA
Trigger: TGCCTGGCAACAGAGACCCCAAGACCTACACAGTGA...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGTTTTCACAAGTCACCTaGAGAACGCCTTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQFSQVT*RTPLGQ
Trigger: CTGCCCCAAAGGCGTTCTCCAGGTGACTTGTGAAAA...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGTTTTCACAAGTCACCTaGAGAACGCCTTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKFSQVT*RTPLGQ
Trigger: CTGCCCCAAAGGCGTTCTCCAGGTGACTTGTGAAAA...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTGCAGATGTCAGCCTaGACCCAGGATGCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPVQMSA*TQDAFR
Trigger: ACGAAAAGCATCCTGGGTTCAGGCTGACATCTGCAC...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCTGTCTGCTGAAACCTTaGTGTGCTTCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFCLLKP*CASGPG
Trigger: TCCTGGCCCTGAAGCACATCAAGGTTTCAGCAGACA...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCAGTCACTTAACATGTTaGGTCCGTCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFSHLTC*VRPGSG
Trigger: CCCTGAGCCTGGACGGACTCAACATGTTAAGTGACT...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCATACGGAGGCCTCCAGTaGCACAGTATTTCCTACTCT +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEAYGGLQ*HSISYS
Trigger: AGAGTAGGAAATACTGTGTCACTGGAGGCCTCCGTA...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCAGGAGATCAGTGGTTCTaGGCACACTACACAATGCTA +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSGDQWF*AHYTML
Trigger: TAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCC...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGGGAGATCAGTGGTTCTaGGCACACTACACAATGCTA +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKGDQWF*AHYTML
Trigger: TAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCC...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGGAAAAGCTAAAGCTCTaGGAAGATCTGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKEKLKL*EDLAGK
Trigger: CTTCCCTGCCAGATCTTCTCAGAGCTTTAGCTTTTC...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGGATTTGGGGCAAATGTaGAACAGGAATACTTGGATT +
Preference number: 4 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQDLGQM*NRNTWI
Trigger: AATCCAAGTATTCCTGTTTCACATTTGCCCCAAATC...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATATACGCATATGGACTTaGAGATACAACACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GKGIATGEPALRHGGRTHIRIWT*RYNTSS
Trigger: TGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTAT...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTCCATGGCGCGGACTCTaGGCGGGCAGAAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCPWRGL*AGRSGR
Trigger: TCTCCCGCTTCTGCCCGCGCAGAGTCCGCGCCATGG...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTGCCTGTCTCTGCGTGTaGAGCGCGATCTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSACLCV*SAIFSL
Trigger: CAGTGAGAAGATCGCGCTGCACACGCAGAGACAGGC...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCATCTTTCCAAGGAGGCTaGTGCCTTGGCCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPASFQGG*CLGQLS
Trigger: TGAGAGTTGGCCAAGGCAGCAGCCTCCTTGGAAAGA...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAATAAGGCACTGTCCCTaGCCTCAAGGAGCTTACGGT +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPAIRHCP*PQGAYG
Trigger: ACCGTAAGCTCCTTGAGGGCAGGGACAGTGCCTTAT...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCATCATTCATCATGCGCTaGACGCACGGTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPASFIMR*THGSAA
Trigger: TGCTGCAGAACCGTGCGTGCAGCGCATGATGAATGA...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCATTTTGGCACATGGGGTaGTGGGTAGCATTGCGACTG +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPAFWHMG*WVALRL
Trigger: CAGTCGCAATGCTACCCAGCACCCCATGTGCCAAAA...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAGCAGGGTGGCTGCTGTaGAGACAAACTGAACTGGGA +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPAGWLL*RQTELG
Trigger: TCCCAGTTCAGTTTGTCTGCACAGCAGCCACCCTGC...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGCACTGCTCCGCAGCTaGCTCACATTTGGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPAALLRS*LTFGKD
Trigger: ATCCTTACCAAATGTGAGCCAGCTGCGGAGCAGTGC...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGCTCCCACAGTTGTTTTaGCAGTGGCTTCGGAACATT +
Preference number: 4 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQLPQLF*QWLRNI
Trigger: AATGTTCCGAAGCCACTGCCAAAACAACTGTGGGAG...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCATCGAGTAGTGGAGGTTaGTTAGATCTGGCAATGACC +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSSSSGG*LDLAMT
Trigger: GGTCATTGCCAGATCTAACCAACCTCCACTACTCGA...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCACTTCTTATACCCAGGTaGGTCATAGCAGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEALLIPR*VIAAGM
Trigger: CATCCCAGCTGCTATGACCCACCTGGGTATAAGAAG...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCATGCAGGGTAAGGGGGTaGCGGCGACACCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPCRVRG*RRHLGL
Trigger: CAAGCCCAGGTGTCGCCGCCACCCCCTTACCCTGCA...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCACATCGGCTGACTGGATaGCCAGTAAAAAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSHRLTG*PVKRCS
Trigger: ACTGCATCTTTTTACTGGCCATCCAGTCAGCCGATG...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGAGGGCCTCGCCCTCTaGGTCAGGTCAGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPEGLAL*VRSEQA
Trigger: TGCCTGCTCTGACCTGACCCAGAGGGCGAGGCCCTC...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCACGTGGGAGAGAGCCGTaGGGTCCACTCAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPRGREP*GPLSLG
Trigger: TCCCAGGCTGAGTGGACCCCACGGCTCTCTCCCACG...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CAA 72 bp TACATAAGGGACAGGTGTGCCAGATTCAGACCCTCATaGTACAGCCTTGCTCCTCTGGGTGGAACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: YIRDRCARFRPS*YSLAPLGGTVQ
Trigger: CTGGACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCTGGCACACCTGTCCCTTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTCTCTCCACCAGCCCGTaGTGGCGGGTTCCCCGAACA +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCLSTSP*WRVPRT
Trigger: TGTTCGGGGAACCCGCCATCACGGGCTGGTGGAGAG...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTAAGACAGCTGTCTGCTaGAACCTTGATGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLKTAVC*NLDVLQ
Trigger: CTGAAGCACATCAAGGTTTCAGCAGACAGCTGTCTT...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTAGGAGGACTCTGGTTTaGTTTCCCAATTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLRRTLV*FPNSTA
Trigger: TGCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCT...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAAAAAGCCACCCCCTCTaGGATCTTGAGCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPKSHPL*DLEHKG
Trigger: CCCTTTGTGCTCAAGATCTCAGAGGGGGTGGCTTTT...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp ATTGCTCTGAGAGGCAAAGGATGCTCTCAGGATCCCTGGGCACCAGGCAGAGTGACTACTCCACAACACTaGCATGCCCTAAGTAACAAC +
Preference number: 4 (lower is better)
Translates to: IALRGKGCSQDPWAPGRVTTPQH*HALSNN
Trigger: GTTGTTACTTAGGGCATGTCAGTGTTGTGGAGTAGT...CACTCTGCCTGGTGCCCAGGGATCCTGAGAGCATCCTTTGCCTCTCAGAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGACCTCAGGCAGGCCTaGCAGCGCACTGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPDLRQA*QRTVEV
Trigger: GACCTCAACAGTGCGCTGGCAGGCCTGCCTGAGGTC...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTCTGGAGCCGTGGCATTaGTTCCTTCTATGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLLEPWH*FLLCQD
Trigger: ATCTTGACATAGAAGGAAGCAATGCCACGGCTCCAG...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCACTTCAGGCTCATCAGTaGCAGGGGACTCTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPALQAHQ*QGTLFS
Trigger: ACTGAAAAGAGTCCCCTGGCACTGATGAGCCTGAAG...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCCTCATTGTACAGCCTTaGTCCTCTGGGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFLIVQP*SSGWNS
Trigger: ACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAG...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTCTCATTGTACAGCCTTaGTCCTCTGGGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPLIVQP*SSGWNS
Trigger: ACTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAG...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTCATAAGGGACAGGTGTaGCAGATTCAGACCCTCATT +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLHKGQV*QIQTLI
Trigger: AATGAGGGTCTGAATCTGGCACACCTGTCCCTTATG...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAAGTGCTAAACCATATTaGCCCCAGTGTACACCCCCA +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPASAKPY*PQCTPP
Trigger: TGGGGGTGTACACTGGGGGCAATATGGTTTAGCACT...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCAGTGCTAAACCATATTaGCCCCAGTGTACACCCCCA +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFSAKPY*PQCTPP
Trigger: TGGGGGTGTACACTGGGGGCAATATGGTTTAGCACT...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp ATTGCTCTGAGAGGCAAAGGATGCTCTCAGGATCCCTGGGCACCAGGCAGAGTGCCTACTCAAGTTCTCTaGCAAAAGTACCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: IALRGKGCSQDPWAPGRVPTQVL*QKYPRQ
Trigger: CTGTCTTGGGTACTTTTGGCAGAGAACTTGAGTAGG...CACTCTGCCTGGTGCCCAGGGATCCTGAGAGCATCCTTTGCCTCTCAGAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGGAAGCGGTTCCTGGATaGCCTCTCCACCAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTEAVPG*PLHQPV
Trigger: CACGGGCTGGTGGAGAGGCCATCCAGGAACCGCTTC...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGGGTGTCCAGGGAGGCTaGCAGGGGTGTCGAGTAGTG +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLGVQGG*QGCRVV
Trigger: CACTACTCGACACCCCTGCCAGCCTCCCTGGACACC...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCACTTCTTATACCCAGGTaGGTCATAGCAGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPALLIPR*VIAAGM
Trigger: CATCCCAGCTGCTATGACCCACCTGGGTATAAGAAG...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCGAAGAGCAGATGCGTTaGGAACAGATGTCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFEEQMR*EQMSVG
Trigger: ACCCACAGACATCTGTTCCCAACGCATCTGCTCTTC...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCATGTGGTGGAAAGAGATaGGTTGCTAAGGGAAAACAG +
Preference number: 4 (lower is better)
Translates to: GIATGEPALRHGGRTHSSCGGKR*VAKGKQ
Trigger: CTGTTTTCCCTTAGCAACCCATCTCTTTCCACCACA...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTTCTGAGGACACCATCTaGGAGGTAGGATATGGGGCC +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSSEDTI*EVGYGA
Trigger: GGCCCCATATCCTACCTCCCAGATGGTGTCCTCAGA...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCCTCTTCCAGTGGAAATaGAGTGTCCACGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFLFQWK*SVHVQA
Trigger: AGCCTGAACGTGGACACTCCATTTCCACTGGAAGAG...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCTCTCATCTGAAACCCTaGAGCCGTGGCATTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSSHLKP*SRGIAS
Trigger: GGAAGCAATGCCACGGCTCCAGGGTTTCAGATGAGA...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGGTCTTCCTCTTCCTCTaGTCCATAAGGAAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKVFLFL*SIRKRC
Trigger: ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGAC...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTGGAGGCAGGCGGTGGTaGAAATCTGGCCCATCTATT +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSGGRRW*KSGPSI
Trigger: AATAGATGGGCCAGATTTCCACCACCGCCTGCCTCC...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTCCATCCATGAAGCACTaGACACATGCTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPPSMKH*THAGNH
Trigger: ATGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGG...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCTCCTCCATTGCTTCCTCTCAAGAAACATTTCTaGCATCCCTGCCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: AQVTGLLTTTSAPPPLLPLKKHF*HPCQVP
Trigger: TGGCACCTGGCAGGGATGCCAGAAATGTTTCTTGAG...AGGAAGCAATGGAGGAGGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR TCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGAAAGCACAGTCTTATTaGGCGTGGCTTGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLKAQSY*AWLGWR
Trigger: CCTCCATCCAAGCCACGCTCAATAAGACTGTGCTTT...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTTGTCCACGTTCAGGCTaGCCTCAGGCAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCCPRSG*PQAGLP
Trigger: TGGCAGGCCTGCCTGAGGTCAGCCTGAACGTGGACA...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCGGAAGCCACAGTGTCTaGGATGGGATCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSGSHSV*DGISSE
Trigger: TTCAGATGAGATCCCATCTCAGACACTGTGGCTTCC...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCACAGTACAAAGCTGTGTaGTCTGGAGGAAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPQYKAV*SGGSHS
Trigger: ACTGTGGCTTCCTCCAGATCACACAGCTTTGTACTG...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCGAGCACAAAGGGATCTaGAAGTGTAACTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFEHKGI*KCNWEQ
Trigger: CTGTTCCCAGTTACACTTTCAGATCCCTTTGTGCTC...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCCCCCCTCTGAGATCTTaGGCACAAAGGGATCTGAAA +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSPPLRS*AQRDLK
Trigger: TTTCAGATCCCTTTGTGCTCAAGATCTCAGAGGGGG...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCATGGGCCAGGGAAAGATaGTACTTCCCCATGTCCATT +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPWARER*YFPMSI
Trigger: AATGGACATGGGGAAGTAGCATCTTTCCCTGGCCCA...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTCCTGGCCTCATGGACTaGTGGTCAAAACCCACATCT +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSPGLMD*WSKPTS
Trigger: AGATGTGGGTTTTGACCAGCAGTCCATGAGGCCAGG...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTGACCTCAGGCAGGCCTaGCAGCGCACTGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCDLRQA*QRTVEV
Trigger: GACCTCAACAGTGCGCTGGCAGGCCTGCCTGAGGTC...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTGAGTGGGTTGTACGATaGCCAAAACCTTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLEWVVR*PKPFTR
Trigger: TCTTGTGAAAGGTTTTGGGCATCGTACAACCCACTC...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAGCTGGGAACCATCTGTaGATAAATCAGAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEAAGNHL*INQKSQ
Trigger: TTGGCTCTTCTGATTTATGCACAGATGGTTCCCAGC...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAGTGGGTCATAGCAGCTaGGATGTTGTTCACACTATT +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEAVGHSS*DVVHTI
Trigger: AATAGTGTGAACAACATCCCAGCTGCTATGACCCAC...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTGGGAATGTCCCCCGCTaGAGGGCCTCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIGNVPR*RASPSG
Trigger: CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCC...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACCGTGGGAGAGAGCCGTaGGGTCCACTCAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYRGREP*GPLSLG
Trigger: TCCCAGGCTGAGTGGACCCCACGGCTCTCTCCCACG...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAGCTGAGGACCACAACTaGTTTTGTTACAAAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPAEDHN*FCYKGR
Trigger: GCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGC...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAAGTCTGATTAGTTGCTaGGATGGTCCCATCCATGAA +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEASLISC*DGPIHE
Trigger: TTCATGGATGGGACCATCCCAGCAACTAATCAGACT...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTGGTGCTGGAGTCTaGCAGGATGGTGTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPAGAGV*QDGVRE
Trigger: CTCCCGAACACCATCCTGCCAGACTCCAGCACCAGC...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCAAGACAGCTGTCTGCTaGAACCTTGATGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSKTAVC*NLDVLQ
Trigger: CTGAAGCACATCAAGGTTTCAGCAGACAGCTGTCTT...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGAGGAGGACTCTGGTTTaGTTTCCCAATTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLRRTLV*FPNSTA
Trigger: TGCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCT...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCGAGCACAAAGGGATCTaGAAGTGTAACTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSEHKGI*KCNWEQ
Trigger: CTGTTCCCAGTTACACTTTCAGATCCCTTTGTGCTC...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CATGCCCTAAGTAACAACCTCGAGACAAAGGAAACACTCTTATTTATAAACTTGCCATGGCGCGGACTCTaGGCGGGCAGAAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: HALSNNLETKETLLFINLPWRGL*AGRSGR
Trigger: TCTCCCGCTTCTGCCCGCGCAGAGTCCGCGCCATGG...CAAGTTTATAAATAAGAGTGTTTCCTTTGTCTCGAGGTTGTTACTTAGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGATTGGTCCTGTTAAGTaGAGATGTCAGCCTGAACCC +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLIGPVK*RCQPEP
Trigger: GGGTTCAGGCTGACATCTGCACTTAACAGGACCAAT...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCCTGGAGCCGTGGCATTaGTTCCTTCTATGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSLEPWH*FLLCQD
Trigger: ATCTTGACATAGAAGGAAGCAATGCCACGGCTCCAG...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGGCCAGGCAGGGTGGCTaGTGTGCAGACAAACTGAAC +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLARQGG*CADKLN
Trigger: GTTCAGTTTGTCTGCACAGCAGCCACCCTGCCTGGC...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGAGTGGGTTGTACGATaGCCAAAACCTTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPAEWVVR*PKPFTR
Trigger: TCTTGTGAAAGGTTTTGGGCATCGTACAACCCACTC...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGTCGAGTAGTGGAGGTTaGTTAGATCTGGCAATGACC +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLSSSGG*LDLAMT
Trigger: GGTCATTGCCAGATCTAACCAACCTCCACTACTCGA...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCATTACTCCGAGAACTCTaGAGACCAGAGGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPLLREL*RPEELL
Trigger: AAGAAGCTCCTCTGGTCTCCAGAGTTCTCGGAGTAA...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGATGGGGCCAGTGGGCTaGTTGAAGACAGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTMGPVG*LKTAVC
Trigger: GCAGACAGCTGTCTTCAACCAGCCCACTGGCCCCAT...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGATGGGGCCAGTGGGCTaGTTGAAGACAGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLMGPVG*LKTAVC
Trigger: GCAGACAGCTGTCTTCAACCAGCCCACTGGCCCCAT...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGACAGAGACACAGCTCTaGGGAGGGATGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTTETQL*GGMGKL
Trigger: GAGCTTCCCCATCCCTCCCCAGAGCTGTGTCTCTGT...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCGCGGTGGTGGAAATCTaGCCCATCTATTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: SGVCLEATEYETPAVPVFAVVEI*PIYFMR
Trigger: TCTCATAAAATAGATGGGCCAGATTTCCACCACCGC...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCGCACTGGACACATGCTaGGAACCATCTGTGCATAAA +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSALDTC*EPSVHK
Trigger: TTTATGCACAGATGGTTCCCAGCATGTGTCCAGTGC...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCATTGAACAGGGTGCCCTaGGGGTTAGGACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPLNRVP*GLGHWQ
Trigger: CTGCCAGTGTCCTAACCCCCAGGGCACCCTGTTCAA...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CAA 72 bp CGTGGTGAGTCCTCCACACCTTCTAGGCAGAGTGGGTaGTACGATGCCCAAAACCTTTCACAAGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: RGESSTPSRQSG*YDAQNLSQEKI
Trigger: GATCTTTTCTTGTGAAAGGTTTTGGGCATCGTACAACCCACTCTGCCTAGAAGGTGTGGAGGACTCACCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGAGATGGGATCTCATCTaGAACCCTGGAGCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLRWDLI*NPGAVA
Trigger: TGCCACGGCTCCAGGGTTTCAGATGAGATCCCATCT...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCCCAGCTGGGAGAAAATaGAAATTAGCCTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSPAGRK*KLAFSL
Trigger: CAGACTGAAGGCTAATTTTCATTTTCTCCCAGCTGG...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCAAAGGTGTACTTTTCTaGAGCAGCAGAAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSKGVLF*SSRNQL
Trigger: CAGCTGGTTTCTGCTGCTTCAGAAAAGTACACCTTT...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGACTGGGACCCGGATATaGCGATACCCATGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLTGTRI*RYPWVR
Trigger: CCTTACCCATGGGTATCGTCATATCCGGGTCCCAGT...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGGGATGGTCCCATCCATaGAGCACTGGACACATGCTG +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLGWSHP*STGHML
Trigger: CAGCATGTGTCCAGTGCTTCATGGATGGGACCATCC...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCATTTTTAAATATGGTTaGACAGGGTGCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSIFKYG*TGCPGG
Trigger: ACCCCCAGGGCACCCTGTTCAACCATATTTAAAAAT...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CCAGTAACTCATAAATCGACACCTCCAGCTCCCAACAGTTCTTTTGTGAACTCCCTGTTCCTCTCAACCTaGAACTCTGACGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: PVTHKSTPPAPNSSFVNSLFLST*NSDALL
Trigger: GAGCAGTGCGTCAGAGTTTCAGGTTGAGAGGAACAG...GGAGTTCACAAAAGAACTGTTGGGAGCTGGAGGTGTCGATTTATGAGTTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp CAAATTCTACCAAAAATCCAACCAATCACTGTCCCCTTAATCTGTTCCTCTTCTAGGTCGGTCATGAGCTaGTCGAAGGCCCGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: QILPKIQPITVPLICSSSRSVMS*SKARVS
Trigger: GGAGACGCGGGCCTTCGAGCAGCTCATGACCGACCT...AGAAGAGGAACAGATTAAGGGGACAGTGATTGGTTGGATTTTTGGTAGAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAAAGCAGCCTGCCTGCTaGAACACGACTTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPKQPAC*NTTLAT
Trigger: TGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTT...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTTCCAAGCAGCCTGCCTaGTGCAACACGACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCSKQPA*CNTTLA
Trigger: GGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTTGGA...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGAAAAGCATATTAAAGTaGATGCTTCACCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKKSILK*MLHHRH
Trigger: GTGCCTATGGTGAAGCATGCACTTTAATATGCTTTT...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGACAGCCCAAGGAGAATaGAGTGCCCGGCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTTAQGE*SARLHC
Trigger: ACAGTGAAGCCGGGCACTGCATTCTCCTTGGGCTGT...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCTCCTCCATTGCTTCCTTTTGTGAACTCCAAGTaGATACTTCCAACTGCCTAC +
Preference number: 4 (lower is better)
Translates to: AQVTGLLTTTSAPPPLLPFVNSK*ILPTAY
Trigger: GTAGGCAGTTGGAAGTATGCACTTGGAGTTCACAAA...AGGAAGCAATGGAGGAGGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTAGGGGTCCTGGGGCTTaGTACTCAGAGCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCRGPGA*YSEHSC
Trigger: ACACGAGTGCTCTGAGTACCAAGCCCCAGGACCCCT...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGATACTGCCAAAGTGGTaGTCGGTGGTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLILPKW*SVVSRE
Trigger: CTCCCTGGACACCACCGACCACCACTTTGGCAGTAT...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAACAGATGTCTGTGGGTaGTTATTTAAGGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: CSALPPSNLLASPKLEEATDVCG*LFKEEE
Trigger: TTCCTCTTCCTTAAATAACCACCCACAGACATCTGT...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTTGGAATACGGGCTTaGTCTCAAATGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPVGIRA*SQMKRV
Trigger: GACTCTTTTCATTTGAGACCAAGCCCGTATTCCAAC...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGGTCTTCCTCTTCCTCTaGTCCATAAGGAAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLVFLFL*SIRKRC
Trigger: ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGAC...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTTGTCTGGAGTTTGTCTaGAGGCCACTGAGTATGAGA +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSCLEFV*RPLSMR
Trigger: TCTCATACTCAGTGGCCTCCAGACAAACTCCAGACA...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACGAAGATCTTCCTGGGTaGGGCCCAGCCAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYEDLPG*GPARML
Trigger: GAGCATCCTGGCTGGGCCCCACCCAGGAAGATCTTC...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTAGGCGAGGAGGACTCTaGTTTGATTTCCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSRRGGL*FDFPIP
Trigger: TGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCT...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGTGGCACATGGGGTGCTaGGTAGCATTGCGACTGAAG +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTWHMGC*VALRLK
Trigger: CTTCAGTCGCAATGCTACCCAGCACCCCATGTGCCA...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCACCTGGAGAACGCCTTTaGGGCAGTAGGGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPPGERL*GSRVHC
Trigger: ACAGTGAACCCTACTGCCCCAAAGGCGTTCTCCAGG...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCACTAATGATGCTTCCATaGATTAGGCCTTCGTTTTAC +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPALMMLP*IRPSFY
Trigger: GTAAAACGAAGGCCTAATTCATGGAAGCATCATTAG...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTACAAAGGAGAATTCATaGCATGATCAAGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: CLSGVCLEATEYETPAVPTKENS*HDQETP
Trigger: AGGGGTTTCTTGATCATGTCATGAATTCTCCTTTGT...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAACAAAGGAGAATTCATaGCATGATCAAGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: GLCLSGVCLEATEYETPATKENS*HDQETP
Trigger: AGGGGTTTCTTGATCATGTCATGAATTCTCCTTTGT...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CTGAGCTGGAAATCAGGCGAGGAGGACTCTGGTTTGATTTCCCAATTCCACAGCATACGCATATGGACTTaGAGATACAACACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LSWKSGEEDSGLISQFHSIRIWT*RYNTSS
Trigger: TGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTAT...GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCTGATTTCCAGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTGAAACTCTGACGCACTaGTCCGCAGCTGGCTCACAT +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCETLTH*SAAGSH
Trigger: ATGTGAGCCAGCTGCGGAGCAGTGCGTCAGAGTTTC...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTTCCCCACACTCATACTaGCAAAGTGGTGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCSPHSY*QSGGRW
Trigger: CCACCGACCACCACTTTGGCAGTATGAGTGTGGGGA...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTAAGCAGCCTGCCTGCTaGAACACGACTTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCKQPAC*NTTLAT
Trigger: TGTGGCCAAAGTCGTGTTGCAGCAGGCAGGCTGCTT...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGTGCCTAACTCAAGCCTaGCCTCGGGCTTGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTCLTQA*PRACGK
Trigger: TTTACCACAAGCCCGAGGGCAGGCTTGAGTTAGGCA...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGTTTTGGCACATGGGGTaGTGGGTAGCATTGCGACTG +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLFWHMG*WVALRL
Trigger: CAGTCGCAATGCTACCCAGCACCCCATGTGCCAAAA...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCCTTCGGTGGAGGGGGTaGAAGCGGTTCCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFLRWRG*KRFLDG
Trigger: GCCATCCAGGAACCGCTTCCACCCCCTCCACCGAAG...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCTCCCCAGACCTTCGGTaGAGGGGGTGGAAGCGGTTC +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFSPDLR*RGWKRF
Trigger: GAACCGCTTCCACCCCCTCCACCGAAGGTCTGGGGA...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAATTCTCTTCTTTCAATaGGCCAGGGAAAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPILFFQ*ARERCY
Trigger: GTAGCATCTTTCCCTGGCCCATTGAAAGAAGAGAAT...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGGGCTTGAGCTTCTGTaGGCAGAAAGGAAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPGLELL*AERKVG
Trigger: GCCAACTTTCCTTTCTGCCCACAGAAGCTCAAGCCC...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACGCCTGCCTTACGGCATaGCGGACGCACTCATTCATC +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYACLTA*RTHSFI
Trigger: GATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGC...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGTCACTGTGTAGGTCTTaGGGTCTCTGTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTSLCRS*GLCCQA
Trigger: TGCCTGGCAACAGAGACCCCAAGACCTACACAGTGA...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACAAGTTGGCTTCGGTCTaGGGACACCATCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYKLASV*GHHLGG
Trigger: ACCTCCCAGATGGTGTCCTCAGACCGAAGCCAACTT...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCACAGTACAAAGCTGTGTaGTCTGGAGGAAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPQYKAV*SGGSHS
Trigger: ACTGTGGCTTCCTCCAGATCACACAGCTTTGTACTG...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp TTTTGTGAACTCCAAGTGCATACTTCCAACTGCCTACTCAAGTTCTCTGCCAAACACACCTGCCTGCATTaGTCTGAGAGGCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: FCELQVHTSNCLLKFSAKHTCLH*SERQRM
Trigger: CATCCTTTGCCTCTCAGAGCAATGCAGGCAGGTGTG...TTTGGCAGAGAACTTGAGTAGGCAGTTGGAAGTATGCACTTGGAGTTCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp AGCTCAAATTCTACCAAAAATCCAACCAATCACTGTCCCCTTAATCTGTTCCTCCAGGCCACACCTGCCTaGATTGCTCTGAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SSNSTKNPTNHCPLNLFLQATPA*IALRGK
Trigger: TTTGCCTCTCAGAGCAATGCAGGCAGGTGTGGCCTG...GAGGAACAGATTAAGGGGACAGTGATTGGTTGGATTTTTGGTAGAATTTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGGTAAGGATCCTCCATaGTACTGTGTAAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPGKDPP*YCVRRS
Trigger: ACTGCGCCTTACACAGTACCATGGAGGATCCTTACC...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGGGTAAGGATCCTCCATaGTACTGTGTAAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTGKDPP*YCVRRS
Trigger: ACTGCGCCTTACACAGTACCATGGAGGATCCTTACC...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTGTTGGAATACGGGCTTaGTCTCAAATGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSVGIRA*SQMKRV
Trigger: GACTCTTTTCATTTGAGACCAAGCCCGTATTCCAAC...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTAGGTCTGTGCTTGTCTaGAGTTTGTCTGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCRSVLV*SLSGGH
Trigger: GTGGCCTCCAGACAAACTCCAGACAAGCACAGACCT...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTAGCTCTGGGGAGGGATaGGGAAGCTCAGTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHISSGEG*GSSVAR
Trigger: CCGAGCAACTGAGCTTCCCCATCCCTCCCCAGAGCT...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGGCTGAGGACCACAACTaGTTTTGTTACAAAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLAEDHN*FCYKGR
Trigger: GCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGC...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCCGTCCTGACAGGGACTaGATCTCCTTGGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFRPDRD*ISLVSH
Trigger: GTGGGAGACCAAGGAGATTCAGTCCCTGTCAGGACG...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGGGGCTTGGTCTCAAATaGAAAGAGTCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLGLGLK*KESCSS
Trigger: AGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCC...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTCTAATGATGCTTCCATaGATTAGGCCTTCGTTTTAC +
Preference number: 4 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSLMMLP*IRPSFY
Trigger: GTAAAACGAAGGCCTAATTCATGGAAGCATCATTAG...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGAAGATAGAAATGGAATaGGGTCGGGAGAGGCTAACC +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLKIEME*GRERLT
Trigger: GGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTT...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACAAAAGCCACCCCCTCTaGGATCTTGAGCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYKSHPL*DLEHKG
Trigger: CCCTTTGTGCTCAAGATCTCAGAGGGGGTGGCTTTT...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCATGGCCAGTAAAAAGATaGAGTGGAGGTGAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPWPVKR*SGGELS
Trigger: GGAAAGCTCACCTCCACTGCATCTTTTTACTGGCCA...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp AGTTCTTTTGTGAACTCCAAGTGCATACTTCCAACTGCCTACTCAAGTTCTCTGCTCTCCCCAAGCCTCTaGAGTTCTGTGCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SSFVNSKCILPTAYSSSLLSPSL*SSVQEN
Trigger: ATTTTCCTGCACAGAACTGCAGAGGCTTGGGGAGAG...CAGAGAACTTGAGTAGGCAGTTGGAAGTATGCACTTGGAGTTCACAAAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCACTCCCACAGTTGTTTTaGCAGTGGCTTCGGAACATT +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPLPQLF*QWLRNI
Trigger: AATGTTCCGAAGCCACTGCCAAAACAACTGTGGGAG...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTTTATTGAGCGTGGCTTaGATGGAGGGGTTACTCCGA +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCLLSVA*MEGLLR
Trigger: TCGGAGTAACCCCTCCATCCAAGCCACGCTCAATAA...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCCCTTGCTCCTCTGGGTaGAACAGTCCAGCAACCCTC +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFPCSSG*NSPATL
Trigger: GAGGGTTGCTGGACTGTTCCACCCAGAGGAGCAAGG...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGGCAGACAAACTGAACTaGGACCCGGATATGACGATA +
Preference number: 4 (lower is better)
Translates to: ESPWYQLASFYSILFWLLADKLN*DPDMTI
Trigger: TATCGTCATATCCGGGTCCCAGTTCAGTTTGTCTGC...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGGTGAGAGTAGTACAATaGTCGATTTCTTGTGACAAA +
Preference number: 4 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLVRVVQ*SISCDK
Trigger: TTTGTCACAAGAAATCGACCATTGTACTACTCTCAC...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp AGCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCTCCTCCATTGCTTCCGGTGGCTGCAATGGATaGAAACAAAAATTAAAGTTA +
Preference number: 4 (lower is better)
Translates to: STGHRAFNNHISASSIASGGCNG*KQKLKL
Trigger: TAACTTTAATTTTTGTTTCCATCCATTGCAGCCACC...GGAAGCAATGGAGGAGGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp GCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCTCCTCCATTGCTTCCTAAGAGGTGGCTGCAATaGATGGAAACAAAAATTAAA +
Preference number: 4 (lower is better)
Translates to: AQVTGLLTTTSAPPPLLPKRWLQ*METKIK
Trigger: TTTAATTTTTGTTTCCATCCATTGCAGCCACCTCTT...AGGAAGCAATGGAGGAGGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR TCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGATTTTTAAATATGGTTaGACAGGGTGCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTIFKYG*TGCPGG
Trigger: ACCCCCAGGGCACCCTGTTCAACCATATTTAAAAAT...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp CCAGTAACTCATAAATCGACACCTCCAGCTCCCAACAGTTCTTTTGTGAACTCCCCAACAGTTCTTTTGTaGACTCCAAGTGCATACTTC +
Preference number: 4 (lower is better)
Translates to: PVTHKSTPPAPNSSFVNSPTVLL*TPSAYF
Trigger: GAAGTATGCACTTGGAGTTCACAAAAGAACTGTTGG...GGAGTTCACAAAAGAACTGTTGGGAGCTGGAGGTGTCGATTTATGAGTTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTATTGGTCCTGTTAAGTaGAGATGTCAGCCTGAACCC +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCIGPVK*RCQPEP
Trigger: GGGTTCAGGCTGACATCTGCACTTAACAGGACCAAT...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACTTATTGAGCGTGGCTTaGATGGAGGGGTTACTCCGA +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYLLSVA*MEGLLR
Trigger: TCGGAGTAACCCCTCCATCCAAGCCACGCTCAATAA...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCGGCCTCATGGACTGCTaGTCAAAACCCACATCTGGG +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFGLMDC*SKPTSG
Trigger: CCCAGATGTGGGTTTTGACCAGCAGTCCATGAGGCC...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCGGAGGCAGGCGGTGGTaGAAATCTGGCCCATCTATT +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFGGRRW*KSGPSI
Trigger: AATAGATGGGCCAGATTTCCACCACCGCCTGCCTCC...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCCTCCTGGAAGGGCAATaGCTGTCCAAGCAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFLLEGQ*LSKQRS
Trigger: GGACCTTTGCTTGGACAGCCATTGCCCTTCCAGGAG...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTAGGCGAGGAGGACTCTaGTTTGATTTCCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCRRGGL*FDFPIP
Trigger: TGGAATTGGGAAATCAAACCAGAGTCCTCCTCGCCT...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCTGTCTGCTGAAACCTTaGTGTGCTTCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFCLLKP*CASGPG
Trigger: TCCTGGCCCTGAAGCACATCAAGGTTTCAGCAGACA...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCAGTCACTTAACATGTTaGGTCCGTCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFSHLTC*VRPGSG
Trigger: CCCTGAGCCTGGACGGACTCAACATGTTAAGTGACT...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCATAAGGCACTGTCCCTaGCCTCAAGGAGCTTACGGT +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFIRHCP*PQGAYG
Trigger: ACCGTAAGCTCCTTGAGGGCAGGGACAGTGCCTTAT...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CCAAAAATCCAACCAATCACTGTCCCCTTAATCTGTTCCTCTTCTTATAGTCCATCCTCCTCGAGTTACTaGCTCAATCCATCAACACAG +
Preference number: 4 (lower is better)
Translates to: PKIQPITVPLICSSSYSPSSSSY*LNPSTQ
Trigger: CTGTGTTGATGGATTGAGGCAGTAACTCGAGGAGGA...TGGACTATAAGAAGAGGAACAGATTAAGGGGACAGTGATTGGTTGGATTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGGTCAAAACCCACATCTaGGAAGAAGTTGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CINQKSQQEWEQERSANTVKTHI*EEVGQR
Trigger: TCTTTGACCAACTTCTTCCCAGATGTGGGTTTTGAC...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGATTTGGGGCAAATGTaGAACAGGAATACTTGGATT +
Preference number: 4 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPDLGQM*NRNTWI
Trigger: AATCCAAGTATTCCTGTTTCACATTTGCCCCAAATC...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACGCTGGGAACCATCTGTaGATAAATCAGAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYAGNHL*INQKSQ
Trigger: TTGGCTCTTCTGATTTATGCACAGATGGTTCCCAGC...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR GCA 90 bp CAAATTCTACCAAAAATCCAACCAATCACTGTCCCCTTAATCTGTTCCTCTTCTGTGCATACTTCCAACTaGCTACTCAAGTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QILPKIQPITVPLICSSSVHTSN*LLKFSA
Trigger: GGCAGAGAACTTGAGTAGGCAGTTGGAAGTATGCAC...AGAAGAGGAACAGATTAAGGGGACAGTGATTGGTTGGATTTTTGGTAGAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CCA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCGAAACCCTGGAGCCGTaGCATTGCTTCCTTCTATGT +
Preference number: 4 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFETLEP*HCFLLC
Trigger: ACATAGAAGGAAGCAATGCCACGGCTCCAGGGTTTC...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACTACACATCGGCTGACTaGATGGCCAGTAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYYTSAD*MASKKM
Trigger: CATCTTTTTACTGGCCATCCAGTCAGCCGATGTGTA...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACAGTCTGATTAGTTGCTaGGATGGTCCCATCCATGAA +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYSLISC*DGPIHE
Trigger: TTCATGGATGGGACCATCCCAGCAACTAATCAGACT...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
3UTR CAA 72 bp GAAAAGATCGGACTCACTCATAGACCTAAGGACAAATaGAATTCAGTGCTAAACCATATTGCCCCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: EKIGLTHRPKDK*NSVLNHIAPSV
Trigger: TACACTGGGGGCAATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGATCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR TCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTGGGCTTGGTCTCAAATaGAAAGAGTCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIGLGLK*KESCSS
Trigger: AGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCC...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTGATAACGAAAGCCCGTaGTATCAGCTGGCTTCATTC +
Preference number: 4 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIDNESP*YQLASF
Trigger: GAATGAAGCCAGCTGATACCACGGGCTTTCGTTATC...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACGGCTTCACTGTGATTTaGTCACCTAGTGTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYGFTVI*SPSVKS
Trigger: GCTTTTAACACTAGGTGACCAAATCACAGTGAAGCC...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CCA 90 bp CCAAAAATCCAACCAATCACTGTCCCCTTAATCTGTTCCTCTTCTTATAGTCCAATCCCCACACTCACATaGATCTTTTCTTATCCCTCT +
Preference number: 4 (lower is better)
Translates to: PKIQPITVPLICSSSYSPIPTLT*IFSYPS
Trigger: AGAGGGATAAGAAAAGATCCATGTGAGTGTGGGGAT...TGGACTATAAGAAGAGGAACAGATTAAGGGGACAGTGATTGGTTGGATTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR GCA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTAAAAGCATATTAAAGTaGATGCTTCACCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIKSILK*MLHHRH
Trigger: GTGCCTATGGTGAAGCATGCACTTTAATATGCTTTT...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS GCA 90 bp GGTTGGCGCTGCCCGAGCCCGGCGAGGCGGCCATGGCGCGGACTCTaGGCGGGCAGAAGCGGGAGACGGCGGCCGTGGGGCCTGTACCTC +
Preference number: 5 (lower is better)
Translates to: GWRCPSPARRPWRGL*AGRSGRRRPWGLYL
Trigger: GAGGTACAGGCCCCACGGCCGCCGTCTCCCGCTTCTGCCCGCGCAGAGTCCGCGCCATGGCCGCCTCGCCGGGCTCGGGCAGCGCCAACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560098.5
CDS CCA 90 bp CCATGGCGCGGACTCTGCGCGGGCAGAAGCGGGAGACGGCGGCCGTaGGGCCTGTACCTCGGCCCACCCGTCCGTCCACAGGCCGCCGGG +
Preference number: 5 (lower is better)
Translates to: PWRGLCAGRSGRRRP*GLYLGPPVRPQAAG
Trigger: CCCGGCGGCCTGTGGACGGACGGGTGGGCCGAGGTACAGGCCCCACGGCCGCCGTCTCCCGCTTCTGCCCGCGCAGAGTCCGCGCCATGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560098.5
CDS CCA 90 bp GGTGCCCGCGGCCTTCCACGCCGGCAGAACAGCAGGGCTCGATGGTaGGGGATGTTCGGAGCGACCAGAAGCCGCGCCGCGCCACCCGGC +
Preference number: 5 (lower is better)
Translates to: GARGLPRRQNSRARW*GMFGATRSRAAPPG
Trigger: GCCGGGTGGCGCGGCGCGGCTTCTGGTCGCTCCGAACATCCCCCACCATCGAGCCCTGCTGTTCTGCCGGCGTGGAAGGCCGCGGGCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558619.5
CDS CCA 90 bp TGGGGTGCCCGCGGCCTTCCACGCCGGCAGAACAGCAGGGCTCGATaGTGGGGGATGTTCGGAGCGACCAGAAGCCGCGCCGCGCCACCC +
Preference number: 5 (lower is better)
Translates to: WGARGLPRRQNSRAR*WGMFGATRSRAAPP
Trigger: GGGTGGCGCGGCGCGGCTTCTGGTCGCTCCGAACATCCCCCACCATCGAGCCCTGCTGTTCTGCCGGCGTGGAAGGCCGCGGGCACCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558619.5
CDS-3UTR CAA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGGTCTTGGGGTCTCTGTaGCCAGGCAGGGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGVLGSL*PGRVAA
Trigger: AGCAGCCACCCTGCCTGGCAACAGAGACCCCAAGAC...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATCTGAACTTCCGCGGGTaGGCGCTGCCCGAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: GKGIATGEPALRHGGRTHLNFRG*ALPEPG
Trigger: GCCGGGCTCGGGCAGCGCCAACCCGCGGAAGTTCAG...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGAAGGAGGCTGCTGCCTaGGCCAACTCTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGKEAAA*ANSHPE
Trigger: CTCTGGATGAGAGTTGGCCAAGGCAGCAGCCTCCTT...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAAGGAGGCTGCTGCCTaGGCCAACTCTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVKEAAA*ANSHPE
Trigger: CTCTGGATGAGAGTTGGCCAAGGCAGCAGCCTCCTT...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGCTGAACTTCCGCGGGTaGGCGCTGCCCGAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQLNFRG*ALPEPG
Trigger: GCCGGGCTCGGGCAGCGCCAACCCGCGGAAGTTCAG...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGCTGAAGCTTCTGAAATaGAACCCGCGACAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGLKLLK*NPRQGE
Trigger: CTCACCCTGTCGCGGGTTCAATTTCAGAAGCTTCAG...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGACGGGCCGCTCAGGTTaGTGGTGGAAAGAGATGGGT +
Preference number: 5 (lower is better)
Translates to: SAWECPPLEGLALWVRSETGRSG*WWKEMG
Trigger: ACCCATCTCTTTCCACCACAAACCTGAGCGGCCCGT...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS GCA 90 bp TGTGCTTCAGGGCCAGGAGAAAGCGTGAGAGGGCTGACGGGAGGCTaGCGACGCCGAGACGGGCCGCTCAGGTTTGTGGTGGAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: CASGPGESVRGLTGG*RRRDGPLRFVVERD
Trigger: ATCTCTTTCCACCACAAACCTGAGCGGCCCGTCTCGGCGTCGGCAGCCTCCCGTCAGCCCTCTCACGCTTTCTCCTGGCCCTGAAGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 90 bp GCACTACCATCAAATTGTCGCCCTGGCTTGTCCCCAGACCTTCGGTaGAGGGGGTGGAAGCGGTTCCTGGATGGCCTCTCCACCAGCCCG +
Preference number: 5 (lower is better)
Translates to: ALPSNCRPGLSPDLR*RGWKRFLDGLSTSP
Trigger: CGGGCTGGTGGAGAGGCCATCCAGGAACCGCTTCCACCCCCTCCACCGAAGGTCTGGGGACAAGCCAGGGCGACAATTTGATGGTAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558619.5
CDS CCA 90 bp CTGGCTCCCTTGTACAAGGTCCTCATCACTGCGAATGGTCGCAGGTaGCATAGGGAGGGGAGAGCACAGGCTGGGCCATCAGCGGGGCCT +
Preference number: 5 (lower is better)
Translates to: LAPLYKVLITANGRR*HREGRAQAGPSAGP
Trigger: AGGCCCCGCTGATGGCCCAGCCTGTGCTCTCCCCTCCCTATGCCACCTGCGACCATTCGCAGTGATGAGGACCTTGTACAAGGGAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS-3UTR CAA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCGGCGACACCTGGGCTaGAGCTTCTGTGGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTRRHLG*SFCGQK
Trigger: TTTCTGCCCACAGAAGCTCAAGCCCAGGTGTCGCCG...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GTGGGGTCCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGACATCTGGGAAGAAGTaGGTCAAAGATGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VGSTQPGNVPRWRASPSGTSGKK*VKDEPW
Trigger: CCAGGGCTCATCTTTGACCAACTTCTTCCCAGATGT...CCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGGACCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGCGGCGACACCTGGGCTaGAGCTTCTGTGGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQRRHLG*SFCGQK
Trigger: TTTCTGCCCACAGAAGCTCAAGCCCAGGTGTCGCCG...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCCTGCCAGCGCACTGTaGAGGTCTTTGAACAGGCTG +
Preference number: 5 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTPASAL*RSLNRL
Trigger: CAGCCTGTTCAAAGACCTCAACAGTGCGCTGGCAGG...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTGCTGCAACACGACTTaGGCCACAGGCGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: GKGIATGEPALRHGGRTHCCNTT*ATGGRG
Trigger: GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCA...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGATTCAGACCCTCATaGTACAGCCTTGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVRFRPS*YSLAPL
Trigger: CAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCT...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGCAGCACCATCGCCTGTaGAGAGTGAGATCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: SAWECPPLEGLALWVRSEQHHRL*RVRSGL
Trigger: CAAACCTGATCTCACTCTCAACAGGCGATGGTGCTG...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 90 bp GTCCAGGCTCAGGGGTTCAATCTGCAGCTCCTCTTCCAGTGGAAATaGAGTGTCCACGTTCAGGCTGACCTCAGGCAGGCCTGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: VQAQGFNLQLLFQWK*SVHVQADLRQACQR
Trigger: GCGCTGGCAGGCCTGCCTGAGGTCAGCCTGAACGTGGACACTCCATTTCCACTGGAAGAGGAGCTGCAGATTGAACCCCTGAGCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CCACTCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCCTGTGTAAGGCGCAGTaGCTGAAGCTTCTGAAATTG +
Preference number: 5 (lower is better)
Translates to: PLSLGMSPAGGPRPLGQVLCKAQ*LKLLKL
Trigger: CAATTTCAGAAGCTTCAGCAACTGCGCCTTACACAG...GACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACCCTCATTGTACAGCCTaGCTCCTCTGGGTGGAACAG +
Preference number: 5 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHPHCTA*LLWVEQ
Trigger: CTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGG...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TCAGCCTGGGAATGTCCCCCGCTGGAGGGCCTCGCCCTCTGGGTCAGGTCAGAGGAGGAGGACTCTGGTTaGATTTCCCAATTCCACAGC +
Preference number: 5 (lower is better)
Translates to: SAWECPPLEGLALWVRSEEEDSG*ISQFHS
Trigger: GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTC...CTCTGACCTGACCCAGAGGGCGAGGCCCTCCAGCGGGGGACATTCCCAGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACGCAGCTGGCTCACATTaGGTAAGGATCCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHAAGSH*VRILHG
Trigger: ACCATGGAGGATCCTTACCAAATGTGAGCCAGCTGC...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGCACCAGAGGCACCTGTaGAGGAAAGGCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKHQRHL*RKGRAW
Trigger: CCAGGCCCTGCCTTTCCTCAACAGGTGCCTCTGGTG...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACCAGCACCATCGCCTGTaGAGAGTGAGATCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHQHHRL*RVRSGL
Trigger: CAAACCTGATCTCACTCTCAACAGGCGATGGTGCTG...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp CTGGAACTCTGTGTTCTGCCAGGGACACAGTTTGTGGGGCAGGCCTaGGACCTTCCATGTAGCTGGTGGGGTAAGTGGGCTCGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LELCVLPGTQFVGQA*DLPCSWWGKWARSL
Trigger: CAGACTCCGAGCCCACTTACCCCACCAGCTACATGGAAGGTCTCAGGCCTGCCCCACAAACTGTGTCCCTGGCAGAACACAGAGTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558496.5
CDS GCA 90 bp CAGTGGAAATGGAGTGTCCACGTTCAGGCTGACCTCAGGCAGGCCTaGCAGCGCACTGTTGAGGTCTTTGAACAGGCTGGTGCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: QWKWSVHVQADLRQA*QRTVEVFEQAGAGV
Trigger: GACTCCAGCACCAGCCTGTTCAAAGACCTCAACAGTGCGCTGGCAGGCCTGCCTGAGGTCAGCCTGAACGTGGACACTCCATTTCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 90 bp CGGTGGTGTCCAGGGAGGCTGGCAGGGGTGTCGAGTAGTGGAGGTTaGTTAGATCTGGCAATGACCCTCCAGTGTTCAAGGTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: RWCPGRLAGVSSSGG*LDLAMTLQCSRSPR
Trigger: TCTTGGGGACCTTGAACACTGGAGGGTCATTGCCAGATCTAACCAACCTCCACTACTCGACACCCCTGCCAGCCTCCCTGGACACCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558005.1
ENST00000560320.1
CDS CCA 90 bp CTGCCGACGCCGAGACGGGCCGCTCAGGTTTGTGGTGGAAAGAGATaGGTTGCTAAGGGAAAACAGACGGAGCGAAGGGTGAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: LPTPRRAAQVCGGKR*VAKGKQTERRVKSR
Trigger: TCTGCTCTTCACCCTTCGCTCCGTCTGTTTTCCCTTAGCAACCCATCTCTTTCCACCACAAACCTGAGCGGCCCGTCTCGGCGTCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 90 bp TTGCTGAAGCTTCTGAAATTGAACACTCGACACGGAATCCCGTCGTaGTTCCAACAACCCGAGCCACCCCAGGGCCGGGCCCTGGATGGA +
Preference number: 5 (lower is better)
Translates to: LLKLLKLNTRHGIPS*FQQPEPPQGRALDG
Trigger: TCCATCCAGGGCCCGGCCCTGGGGTGGCTCGGGTTGTTGGAACCACGACGGGATTCCGTGTCGAGTGTTCAATTTCAGAAGCTTCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558619.5
CDS-3UTR CAA 90 bp GGGCCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTACCCCCTCTGAGATCTaGAGCACAAAGGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: GPSQDAQGTHLLSPSGCTTPSEI*STKGSE
Trigger: TTCAGATCCCTTTGTGCTCAAGATCTCAGAGGGGGT...AGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp TATGGGGCCAGTGGGCTGGTTGAAGACAGCTGTCTGCTGAAACCTTaGTGTGCTTCAGGGCCAGGAGAAAGCGTGAGAGGGCTGACGGGA +
Preference number: 5 (lower is better)
Translates to: YGASGLVEDSCLLKP*CASGPGESVRGLTG
Trigger: TCCCGTCAGCCCTCTCACGCTTTCTCCTGGCCCTGAAGCACATCAAGGTTTCAGCAGACAGCTGTCTTCAACCAGCCCACTGGCCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp TTCTCCTTCCTCCACCCCTGCGCCCGAGTACTGAGAAGAATGAAGTaGGAGCACGGGCCCTCCTGGCACACTTCTGTGTCCTCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: FSFLHPCARVLRRMK*EHGPSWHTSVSSPK
Trigger: TTTGGGAGAGGACACAGAAGTGTGCCAGGAGGGCCCGTGCTCTCACTTCATTCTTCTCAGTACTCGGGCGCAGGGGTGGAGGAAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CCA 90 bp TGTTCACACTATTCCCCACACTCATACTGCCAAAGTGGTGGTCGGTaGTGTCCAGGGAGGCTGGCAGGGGTGTCGAGTAGTGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: CSHYSPHSYCQSGGR*CPGRLAGVSSSGGW
Trigger: CCAACCTCCACTACTCGACACCCCTGCCAGCCTCCCTGGACACCACCGACCACCACTTTGGCAGTATGAGTGTGGGGAATAGTGTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS-3UTR CAA 90 bp CCAGTAACTCATAAATCGACACCTCCAGCTCCCAACAGTTCTTTTGTGAACTCCCTGAACTTCCGCGGGTaGGCGCTGCCCGAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: PVTHKSTPPAPNSSFVNSLNFRG*ALPEPG
Trigger: GCCGGGCTCGGGCAGCGCCAACCCGCGGAAGTTCAG...GGAGTTCACAAAAGAACTGTTGGGAGCTGGAGGTGTCGATTTATGAGTTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CAA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGGAAAGCACAGTCTTATaGAGCGTGGCTTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQESTVL*SVAWME
Trigger: CTCCATCCAAGCCACGCTCAATAAGACTGTGCTTTC...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGACATCTGGGAAGAAGTaGGTCAAAGATGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQTSGKK*VKDEPW
Trigger: CCAGGGCTCATCTTTGACCAACTTCTTCCCAGATGT...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCAGGGAGACTCCCGCAGTaGGAATACGGGCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: CSALPPSNLLASPKLEEAGRLPQ*EYGLGL
Trigger: GAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCC...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCTTGGGGTCTCTGTaGCCAGGCAGGGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GLCLSGVCLEATEYETPAVLGSL*PGRVAA
Trigger: AGCAGCCACCCTGCCTGGCAACAGAGACCCCAAGAC...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp CAACAGAGGGGTCCAGCAGGCCCATGCTGGAGTCACTTAACATGTTaGGTCCGTCCAGGCTCAGGGGTTCAATCTGCAGCTCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: QQRGPAGPCWSHLTC*VRPGSGVQSAAPLP
Trigger: TGGAAGAGGAGCTGCAGATTGAACCCCTGAGCCTGGACGGACTCAACATGTTAAGTGACTCCAGCATGGGCCTGCTGGACCCCTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 90 bp AACAGGAGCCTTGATGGAGTGGGGCCCTATCCTGCAGGCCTGGGCTaGGCAGCTCAAATAAATACAGAATCTGGGCAGGGCTCAGGAACT +
Preference number: 5 (lower is better)
Translates to: NRSLDGVGPYPAGLG*AAQINTESGQGSGT
Trigger: AGTTCCTGAGCCCTGCCCAGATTCTGTATTTATTTGAGCTGCCCAGCCCAGGCCTGCAGGATAGGGCCCCACTCCATCAAGGCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558496.5
CDS-3UTR CAA 90 bp CCCAGCCAGGATGCTCAGGGCACTCACCTGCTCAGCCCTTCCGGATGTACTCAGCTGTGTAAGGCGCAGTaGCTGAAGCTTCTGAAATTG +
Preference number: 5 (lower is better)
Translates to: PSQDAQGTHLLSPSGCTQLCKAQ*LKLLKL
Trigger: CAATTTCAGAAGCTTCAGCAACTGCGCCTTACACAG...CTGAGTACATCCGGAAGGGCTGAGCAGGTGAGTGCCCTGAGCATCCTGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGCTTGGTCTCCCACAGTaGTTTTGGCAGTGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKLGLPQ*FWQWLR
Trigger: CCGAAGCCACTGCCAAAACAACTGTGGGAGACCAAG...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGCTTGGTCTCCCACAGTaGTTTTGGCAGTGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQLGLPQ*FWQWLR
Trigger: CCGAAGCCACTGCCAAAACAACTGTGGGAGACCAAG...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCACTTATTGAGCGTGGCTaGGATGGAGGGGTTACTCCG +
Preference number: 5 (lower is better)
Translates to: GIATGEPALRHGGRTHSSLIERG*DGGVTP
Trigger: CGGAGTAACCCCTCCATCCAAGCCACGCTCAATAAG...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTACGGGCCGCTCAGGTTaGTGGTGGAAAGAGATGGGT +
Preference number: 5 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLTGRSG*WWKEMG
Trigger: ACCCATCTCTTTCCACCACAAACCTGAGCGGCCCGT...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTCAGTTCTCGGGAACCTaGTTGCACCAGAGGCACCTG +
Preference number: 5 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLQFSGT*LHQRHL
Trigger: CAGGTGCCTCTGGTGCAACAAGGTTCCCGAGAACTG...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGGGAGACTCCCGCAGTaGGAATACGGGCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GLCLSGVCLEATEYETPAGRLPQ*EYGLGL
Trigger: GAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCC...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATTCATCAGCACTGTTGAGGTCTTaGAACAGGCTGGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GIATGEPALRHGGRTHSSALLRS*NRLVLE
Trigger: CTCCAGCACCAGCCTGTTCAAAGACCTCAACAGTGC...TGATGAATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGGAAGGGGATAGCTACAGGTGAGCCTGCCTTACGGCATGGCGGACGCACTCATAGGTTTGGAAGCCCTTaGACACAGGAGCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GKGIATGEPALRHGGRTHRFGSP*TQELVS
Trigger: AGAAACCAGCTCCTGTGTCAAAGGGCTTCCAAACCT...ATGAGTGCGTCCGCCATGCCGTAAGGCAGGCTCACCTGTAGCTATCCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 90 bp GTTGCACCAGAGGCACCTGTTGAGGAAAGGCAGGGCCTGGCCTCATaGACTGCTGGTCAAAACCCACATCTGGGAAGAAGTTGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: VAPEAPVEERQGLAS*TAGQNPHLGRSWSK
Trigger: CTTTGACCAACTTCTTCCCAGATGTGGGTTTTGACCAGCAGTCCATGAGGCCAGGCCCTGCCTTTCCTCAACAGGTGCCTCTGGTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp GTGTTCGGGAGACTCCCGCAGTTGGAATACGGGCTTGGTCTCAAATaGAAAGAGTCCTGCAGTTCTCGGGAACCTTGTTGCACCAGAGGC +
Preference number: 5 (lower is better)
Translates to: VFGRLPQLEYGLGLK*KESCSSREPCCTRG
Trigger: GCCTCTGGTGCAACAAGGTTCCCGAGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 90 bp TGGTGCTGGAGTCTGGCAGGATGGTGTTCGGGAGACTCCCGCAGTTaGAATACGGGCTTGGTCTCAAATGAAAAGAGTCCTGCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: WCWSLAGWCSGDSRS*NTGLVSNEKSPAVL
Trigger: GAGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACACCATCCTGCCAGACTCCAGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420329.6
CDS CCA 90 bp AACAGGAGCCTTGATGGAGTGGGGCCCTATCCTGCAGGCCTGGGCTaGGCAGCTCAAATAAATACAGAATCTGAAACTCTGACGCACTGC +
Preference number: 5 (lower is better)
Translates to: NRSLDGVGPYPAGLG*AAQINTESETLTHC
Trigger: GCAGTGCGTCAGAGTTTCAGATTCTGTATTTATTTGAGCTGCCCAGCCCAGGCCTGCAGGATAGGGCCCCACTCCATCAAGGCTCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561218.5
CDS-3UTR CAA 90 bp TGCCAGCGGAAGGGCAGCACAGGTCACAGGGCTTTTAACAACCACATCAGCGCCCTGTGTAAGGCGCAGTaGCTGAAGCTTCTGAAATTG +
Preference number: 5 (lower is better)
Translates to: CQRKGSTGHRAFNNHISALCKAQ*LKLLKL
Trigger: CAATTTCAGAAGCTTCAGCAACTGCGCCTTACACAG...GGCGCTGATGTGGTTGTTAAAAGCCCTGTGACCTGTGCTGCCCTTCCGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CAA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTAATTGTCGCCCTGGCTaGTCCCCAGACCTTCGGTGG +
Preference number: 5 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSNCRPG*SPDLRW
Trigger: CCACCGAAGGTCTGGGGACAAGCCAGGGCGACAATT...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTCTGTCTGCTGAAACCTaGATGTGCTTCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CLSGVCLEATEYETPAVPLSAET*MCFRAR
Trigger: CCTGGCCCTGAAGCACATCAAGGTTTCAGCAGACAG...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTGTCTTCCCTCATTGTACAGCCTaGCTCCTCTGGGTGGAACAG +
Preference number: 5 (lower is better)
Translates to: SGVCLEATEYETPAVPVFPHCTA*LLWVEQ
Trigger: CTGTTCCACCCAGAGGAGCAAGGCTGTACAATGAGG...GAAGACAGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CGACTTTGGCCACAGGCGGGAGAGGCAGTACAAAGCTGTGTGATCTGGAGGAAGGAGGAGGACTCTGGTTaGATTTCCCAATTCCACAGC +
Preference number: 5 (lower is better)
Translates to: RLWPQAGEAVQSCVIWRKEEDSG*ISQFHS
Trigger: GCTGTGGAATTGGGAAATCAAACCAGAGTCCTCCTC...CTTCCTCCAGATCACACAGCTTTGTACTGCCTCTCCCGCCTGTGGCCAAAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp CTGGTGGATCAGGGGTCAGACCCACAAATCACTGACACCAAAGCCTaGGAGCTCTCCGCTAAGCTATGCTGCCTCTCAGGAAACAGTGAA +
Preference number: 5 (lower is better)
Translates to: LVDQGSDPQITDTKA*ELSAKLCCLSGNSE
Trigger: TTCACTGTTTCCTGAGAGGCAGCATAGCTTAGCGGAGAGCTCTCAGGCTTTGGTGTCAGTGATTTGTGGGTCTGACCCCTGATCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561218.5
CDS TCA 90 bp AGTAAACATGAGTGCCCTGCCCCCACTTCCTGGTTTCTAGGCTTGTaGAGCCAACTCTACCATCACTGCCAGGAATTCAGCTCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: SKHECPAPTSWFLGL*SQLYHHCQEFSSPQ
Trigger: CTGCGGAGAGCTGAATTCCTGGCAGTGATGGTAGAGTTGGCTTCACAAGCCTAGAAACCAGGAAGTGGGGGCAGGGCACTCATGTTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CCA 90 bp GCTGCTGCCTTGGCCAACTCTCATCCAGAGGCTGTGAGGAATAATTaGCTCCAAAAGCACTACCATCAAATTGTCGCCCTGGCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: AAALANSHPEAVRNN*LQKHYHQIVALACP
Trigger: GGGACAAGCCAGGGCGACAATTTGATGGTAGTGCTTTTGGAGCCAATTATTCCTCACAGCCTCTGGATGAGAGTTGGCCAAGGCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558005.1
ENST00000558619.5
ENST00000561119.5
CDS CCA 90 bp TGGCAGGATGGTGTTCGGGAGACTCCCGCAGTTGGAATACGGGCTTaGTCTCAAATGAAAAGAGTCCTGCAGTTCTCGGGAACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: WQDGVRETPAVGIRA*SQMKRVLQFSGTLL
Trigger: CAACAAGGTTCCCGAGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACACCATCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 90 bp TGCTGGAGTCTTCTGGCAGGATGGTGTTCGGGAGACTCCCGCAGTTaGAATACGGGCTTGGTCTCAAATGAAAAGAGTCCTGCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: CWSLLAGWCSGDSRS*NTGLVSNEKSPAVL
Trigger: GAGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACACCATCCTGCCAGAAGACTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268184.11
CDS CCA 90 bp AACAGGAGCCTTGATGGAGTGGGGCCCTATCCTGCAGGCCTGGGCTaGGCAGCTCAAATAAATACAGAATTCTTCACCAAAGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: NRSLDGVGPYPAGLG*AAQINTEFFTKGRG
Trigger: TCCCCTTCCTTTGGTGAAGAATTCTGTATTTATTTGAGCTGCCCAGCCCAGGCCTGCAGGATAGGGCCCCACTCCATCAAGGCTCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561255.5
CDS-3UTR CAA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGAGCACTACCATCAAATaGTCGCCCTGGCTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLSTTIK*SPWLVP
Trigger: GGGGACAAGCCAGGGCGACAATTTGATGGTAGTGCT...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTTCTCCCACAGTTGTTTaGGCAGTGGCTTCGGAACAT +
Preference number: 5 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLSPTVV*AVASEH
Trigger: ATGTTCCGAAGCCACTGCCAAAACAACTGTGGGAGA...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGAGTCACTTAACATGTaGAGTCCGTCCAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GLCLSGVCLEATEYETPAESLNM*SPSRLR
Trigger: CCTGAGCCTGGACGGACTCAACATGTTAAGTGACTC...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTACCCCCTCTGAGATCTaGAGCACAAAGGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLTPSEI*STKGSE
Trigger: TTCAGATCCCTTTGTGCTCAAGATCTCAGAGGGGGT...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GCGCTGCACGCACGGTTCTGCAGCACTCACTCCAGCACACGACTGTGCTGCCACAGACCTAAGGACAAATaGAATTCAGTGCTAAACCAT +
Preference number: 5 (lower is better)
Translates to: ALHARFCSTHSSTRLCCHRPKDK*NSVLNH
Trigger: ATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCT...GTGGCAGCACAGTCGTGTGCTGGAGTGAGTGCTGCAGAACCGTGCGTGCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp TTTCCAAGGAGGCTGCTGCCTTGGCCAACTCTCATCCAGAGGCTGTaGGGAATAATTGGCTCCAAAAGCACTGGAGTGTTCTGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: FPRRLLPWPTLIQRL*GIIGSKSTGVFWEG
Trigger: TCCTTCCCAGAACACTCCAGTGCTTTTGGAGCCAATTATTCCTCACAGCCTCTGGATGAGAGTTGGCCAAGGCAGCAGCCTCCTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558496.5
ENST00000561255.5
CDS GCA 90 bp GAAGCCAGATTTACATGTAGAATTCTCAGACTTCTTGGAGTTCTGTaGCAGAATGCACAGGGAGACAGCCTGGCCCTCAGTCCACGTCCC +
Preference number: 5 (lower is better)
Translates to: EARFTCRILRLLGVL*QNAQGDSLALSPRP
Trigger: GGGACGTGGACTGAGGGCCAGGCTGTCTCCCTGTGCATTCTGGCACAGAACTCCAAGAAGTCTGAGAATTCTACATGTAAATCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560320.1
CDS CCA 90 bp CCTGAGACCTTCCATGTAGCTGGTGGGGTAAGTGGGCTCGGAGTCTaGTTAACAGAACCCACCTACCAAGACAAGTTTCAGGGTCAGATT +
Preference number: 5 (lower is better)
Translates to: PETFHVAGGVSGLGV*LTEPTYQDKFQGQI
Trigger: AATCTGACCCTGAAACTTGTCTTGGTAGGTGGGTTCTGTTAACCAGACTCCGAGCCCACTTACCCCACCAGCTACATGGAAGGTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558496.5
CDS-3UTR CAA 90 bp CTGGAAGGGCAATGGCTGTCCAAGCAAAGGTCCTGGCATCTTCCGTCTCTCCTTATAGCAGCTGGGATGTaGTTCACACTATTCCCCACA +
Preference number: 5 (lower is better)
Translates to: LEGQWLSKQRSWHLPSLLIAAGM*FTLFPT
Trigger: TGTGGGGAATAGTGTGAACAACATCCCAGCTGCTAT...AAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGCCATTGCCCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCACCAGAGGCACCTGTaGAGGAAAGGCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ESPWYQLASFYSILFWLLHQRHL*RKGRAW
Trigger: CCAGGCCCTGCCTTTCCTCAACAGGTGCCTCTGGTG...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTTCTAGGCAGAGTGGGTaGTACGATGCCCAAAACCTT +
Preference number: 5 (lower is better)
Translates to: CLSGVCLEATEYETPAVPSRQSG*YDAQNL
Trigger: AAGGTTTTGGGCATCGTACAACCCACTCTGCCTAGA...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp TTTCCAAGGAGGCTGCTGCCTTGGCCAACTCTCATCCAGAGGCTGTaGGGAATAATTGGCTCCAAAAGCACTACCATCAAATTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: FPRRLLPWPTLIQRL*GIIGSKSTTIKLSP
Trigger: GGGCGACAATTTGATGGTAGTGCTTTTGGAGCCAATTATTCCTCACAGCCTCTGGATGAGAGTTGGCCAAGGCAGCAGCCTCCTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558005.1
ENST00000558619.5
ENST00000561119.5
CDS CCA 90 bp CTGGAGACCAGAGGAGCTTCTTATACCCAGGTGGGTCATAGCAGCTaGGATGTTGTTCACACTATTCCCCACACTCATACTGCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: LETRGASYTQVGHSS*DVVHTIPHTHTAKV
Trigger: CACTTTGGCAGTATGAGTGTGGGGAATAGTGTGAACAACATCCCAGCTGCTATGACCCACCTGGGTATAAGAAGCTCCTCTGGTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS-3UTR CAA 90 bp TGCAGTGCTCTGCCCCCTTCAAACCTACTGGCATCACCCAAGTTAGAGGAGGCATTATGTGGAAAAGCATaGCCACCTCCAACATCACAG +
Preference number: 5 (lower is better)
Translates to: CSALPPSNLLASPKLEEALCGKA*PPPTSQ
Trigger: CTGTGATGTTGGAGGTGGCAATGCTTTTCCACATAA...TGCCTCCTCTAACTTGGGTGATGCCAGTAGGTTTGAAGGGGGCAGAGCACTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GGTCTGTGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAATAGCAGCTGGGATGTaGTTCACACTATTCCCCACA +
Preference number: 5 (lower is better)
Translates to: GLCLSGVCLEATEYETPAIAAGM*FTLFPT
Trigger: TGTGGGGAATAGTGTGAACAACATCCCAGCTGCTAT...TGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp CGGACGGAGATCAGTGGTTCTGAGCACACTACACAATGCTACGGAGGCCTCCAGAGTTGGAATACGGGCTaGGTCTCAAATGAAAAGAGT +
Preference number: 5 (lower is better)
Translates to: RTEISGSEHTTQCYGGLQSWNTG*VSNEKS
Trigger: ACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACT...CTGGAGGCCTCCGTAGCATTGTGTAGTGTGCTCAGAACCACTGATCTCCGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TCAGAAGATAGAAATGGAATGAGGTCGGGAGAGGCTAACCAGCCCAGGGTCTTGTCTAGGCAGAGTGGGTaGTACGATGCCCAAAACCTT +
Preference number: 5 (lower is better)
Translates to: SEDRNGMRSGEANQPRVLSRQSG*YDAQNL
Trigger: AAGGTTTTGGGCATCGTACAACCCACTCTGCCTAGA...CAAGACCCTGGGCTGGTTAGCCTCTCCCGACCTCATTCCATTTCTATCTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp GTGGAAAGAGATGGGTTGCTAAGGGAAAACAGACGGAGCGAAGGGTaGAGAGCAGATGCGTTGGGAACAGATGTCTGTGGGTGGTTATTT +
Preference number: 5 (lower is better)
Translates to: VERDGLLRENRRSEG*RADALGTDVCGWLF
Trigger: AAATAACCACCCACAGACATCTGTTCCCAACGCATCTGCTCTTCACCCTTCGCTCCGTCTGTTTTCCCTTAGCAACCCATCTCTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS GCA 90 bp AAGCCTCTGCAGTTCTGTGCAGGAAAATCTTCCTCCTCGAGTTACTaGCTCAATCCATCAACACAGGGACTGCTGTTCCTCTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: KPLQFCAGKSSSSSY*LNPSTQGLLFLSTS
Trigger: AGAGGTTGAGAGGAACAGCAGTCCCTGTGTTGATGGATTGAGGCAGTAACTCGAGGAGGAAGATTTTCCTGCACAGAACTGCAGAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561290.1
CDS-3UTR CAA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTTCTCCCACAGTTGTTTaGGCAGTGGCTTCGGAACAT +
Preference number: 5 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSSPTVV*AVASEH
Trigger: ATGTTCCGAAGCCACTGCCAAAACAACTGTGGGAGA...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTGAAAGCACAGTCTTATaGAGCGTGGCTTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSESTVL*SVAWME
Trigger: CTCCATCCAAGCCACGCTCAATAAGACTGTGCTTTC...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GTGGGAACAGGAAAGGTCTGCAAATACGCATATGGACTTGAAGATACAACACCACAGTTCTCGGGAACCTaGTTGCACCAGAGGCACCTG +
Preference number: 5 (lower is better)
Translates to: VGTGKVCKYAYGLEDTTPQFSGT*LHQRHL
Trigger: CAGGTGCCTCTGGTGCAACAAGGTTCCCGAGAACTG...TGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGACCTTTCCTGTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp ATTAGTTGCTGGGATGGTCCCATCCATGAAGCACTGGACACATGCTGGGAACCAGTGAAACAGGAATACTaGGATTCCAGAGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: ISCWDGPIHEALDTCWEPVKQEY*DSRGRW
Trigger: CCACCTTCCTCTGGAATCCAAGTATTCCTGTTTCAC...TGGTTCCCAGCATGTGTCCAGTGCTTCATGGATGGGACCATCCCAGCAACTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp ATGTCTGTGGGTGGTTATTTAAGGAAGAGGAAAGCACAGTCTTATTaGGCGTGGCTTGGATGGAGGGGTTACTCCGAGAACTCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: MSVGGYLRKRKAQSY*AWLGWRGYSENSGD
Trigger: GTCTCCAGAGTTCTCGGAGTAACCCCTCCATCCAAGCCACGCTCAATAAGACTGTGCTTTCCTCTTCCTTAAATAACCACCCACAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS CCA 90 bp TGGTTATTTAAGGAAGAGGAAAGCACAGTCTTATTGAGCGTGGCTTaGATGGAGGGGTTACTCCGAGAACTCTGGAGACCAGAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: WLFKEEESTVLLSVA*MEGLLRELWRPEEL
Trigger: AAGCTCCTCTGGTCTCCAGAGTTCTCGGAGTAACCCCTCCATCCAAGCCACGCTCAATAAGACTGTGCTTTCCTCTTCCTTAAATAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS-3UTR CAA 90 bp ATCTGTTCCTCTTCTTATAGTCCATCTCATTTAGTGAGGCCACCGTCCACCAAGGCAGCTGGCTCACATTaGGTAAGGATCCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: ICSSSYSPSHLVRPPSTKAAGSH*VRILHG
Trigger: ACCATGGAGGATCCTTACCAAATGTGAGCCAGCTGC...CTTGGTGGACGGTGGCCTCACTAAATGAGATGGACTATAAGAAGAGGAACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS-3UTR CAA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGAGCACTACCATCAAATaGTCGCCCTGGCTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: CINQKSQQEWEQERSANTSTTIK*SPWLVP
Trigger: GGGGACAAGCCAGGGCGACAATTTGATGGTAGTGCT...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGCTTATTGAGCGTGGCTaGGATGGAGGGGTTACTCCG +
Preference number: 5 (lower is better)
Translates to: CINQKSQQEWEQERSANTLIERG*DGGVTP
Trigger: CGGAGTAACCCCTCCATCCAAGCCACGCTCAATAAG...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TGCTTGTCTGGAGTTTGTCTGGAGGCCACTGAGTATGAGACACCTGCAGTCCCTAGTTGGAATACGGGCTaGGTCTCAAATGAAAAGAGT +
Preference number: 5 (lower is better)
Translates to: CLSGVCLEATEYETPAVPSWNTG*VSNEKS
Trigger: ACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACT...AGGGACTGCAGGTGTCTCATACTCAGTGGCCTCCAGACAAACTCCAGACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTTGCTGCAACACGACTTaGGCCACAGGCGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHICCNTT*ATGGRG
Trigger: GCCTCTCCCGCCTGTGGCCAAAGTCGTGTTGCAGCA...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTAGGAGCTGGTTTCTTTaGGCACATGGGGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCRSWFL*AHGVLG
Trigger: ACCCAGCACCCCATGTGCCAAAAGAAACCAGCTCCT...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp TGGCTTCGGTCTGAGGACACCATCGCGGTGTTCTGTGCAATGCTGTaGGAAGCCCGTTTCTCATCCTTCAAAGTATATCTCAAATTTTAC +
Preference number: 5 (lower is better)
Translates to: WLRSEDTIAVFCAML*EARFSSFKVYLKFY
Trigger: GTAAAATTTGAGATATACTTTGAAGGATGAGAAACGGGCTTCTCACAGCATTGCACAGAACACCGCGATGGTGTCCTCAGACCGAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558167.1
CDS-3UTR CAA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTCTGAAGCTTCTGAAATaGAACCCGCGACAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCLKLLK*NPRQGE
Trigger: CTCACCCTGTCGCGGGTTCAATTTCAGAAGCTTCAG...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTAATTGTCGCCCTGGCTaGTCCCCAGACCTTCGGTGG +
Preference number: 5 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHINCRPG*SPDLRW
Trigger: CCACCGAAGGTCTGGGGACAAGCCAGGGCGACAATT...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GCAGCTGCTTCAAATGCTGAGGACCACAACTGGTTTTGTTACAAAGGCCGCAGTAGAGCAGAATCAGAATaGGTCCTGTTAAGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: AAASNAEDHNWFCYKGRSRAESE*VLLSAD
Trigger: ATCTGCACTTAACAGGACCAATTCTGATTCTGCTCT...ACTGCGGCCTTTGTAACAAAACCAGTTGTGGTCCTCAGCATTTGAAGCAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACCTGTCTGCTGAAACCTaGATGTGCTTCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYLSAET*MCFRAR
Trigger: CCTGGCCCTGAAGCACATCAAGGTTTCAGCAGACAG...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 90 bp CTTCTCGACGTAAGTGATCACACCCTCAAGGTTTCCGGTGCTTTCTaGGTTTTGATTACTCTATTTTCGGAAAGAGCTTACCCATGTTCC +
Preference number: 5 (lower is better)
Translates to: LLDVSDHTLKVSGAF*VLITLFSERAYPCS
Trigger: GGAACATGGGTAAGCTCTTTCCGAAAATAGAGTAATCAAAACCCAGAAAGCACCGGAAACCTTGAGGGTGTGATCACTTACGTCGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS-3UTR CAA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACGCAGCTGGCTCACATTaGGTAAGGATCCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYAAGSH*VRILHG
Trigger: ACCATGGAGGATCCTTACCAAATGTGAGCCAGCTGC...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp ATCGGACTCACTCATAGACCTAAGGACAAATTGAATTCAGTGCTAAACCATATTCCTGCCAGCGCACTGTaGAGGTCTTTGAACAGGCTG +
Preference number: 5 (lower is better)
Translates to: IGLTHRPKDKLNSVLNHIPASAL*RSLNRL
Trigger: CAGCCTGTTCAAAGACCTCAACAGTGCGCTGGCAGG...AATATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCTATGAGTGAGTCCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GTCTGCAAATACGCATATGGACTTGAAGATACAACACCAGCTCAGGTAATATACGAGTCACTTAACATGTaGAGTCCGTCCAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VCKYAYGLEDTTPAQVIYESLNM*SPSRLR
Trigger: CCTGAGCCTGGACGGACTCAACATGTTAAGTGACTC...GTATATTACCTGAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATTTGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTAGATTCAGACCCTCATaGTACAGCCTTGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCRFRPS*YSLAPL
Trigger: CAGAGGAGCAAGGCTGTACAATGAGGGTCTGAATCT...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGGTGAAACAGGAATACTaGGATTCCAGAGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: CINQKSQQEWEQERSANTVKQEY*DSRGRW
Trigger: CCACCTTCCTCTGGAATCCAAGTATTCCTGTTTCAC...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp TGCATAAATCAGAAGAGCCAACAAGAGTGGGAACAGGAAAGGTCTGCAAATACGTTATGTGGAAAAGCATaGCCACCTCCAACATCACAG +
Preference number: 5 (lower is better)
Translates to: CINQKSQQEWEQERSANTLCGKA*PPPTSQ
Trigger: CTGTGATGTTGGAGGTGGCAATGCTTTTCCACATAA...CGTATTTGCAGACCTTTCCTGTTCCCACTCTTGTTGGCTCTTCTGATTTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCGCACTGTTGAGGTCTTaGAACAGGCTGGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFALLRS*NRLVLE
Trigger: CTCCAGCACCAGCCTGTTCAAAGACCTCAACAGTGC...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCAGGAGCTGGTTTCTTTaGGCACATGGGGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFRSWFL*AHGVLG
Trigger: ACCCAGCACCCCATGTGCCAAAAGAAACCAGCTCCT...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp GAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGAATACGCATATGGACTaGAAGATACAACACCAGCTC +
Preference number: 5 (lower is better)
Translates to: ESPWYQLASFYSILFWLLNTHMD*KIQHQL
Trigger: GAGCTGGTGTTGTATCTTCAAGTCCATATGCGTATT...CAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp AGTTCTTTTGTGAACTCCAAGTGCATACTTCCAACTGCCTACTCAAGTTCTCTGAGCTTAGTGAAGCCTTaGGCTCAAGGAAGATTTCCA +
Preference number: 5 (lower is better)
Translates to: SSFVNSKCILPTAYSSSLSLVKP*AQGRFP
Trigger: TGGAAATCTTCCTTGAGCCAAAGGCTTCACTAAGCT...CAGAGAACTTGAGTAGGCAGTTGGAAGTATGCACTTGGAGTTCACAAAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS GCA 90 bp TTCAAAGTCAGGTTTAACTCTAACGTGGCCAATTTCTGGAGAAAATaGTCAGAACACCCTGCAATGGGACCGAATTACAGGTTGTTTTTG +
Preference number: 5 (lower is better)
Translates to: FKVRFNSNVANFWRK*SEHPAMGPNYRLFL
Trigger: CAAAAACAACCTGTAATTCGGTCCCATTGCAGGGTGTTCTGAGCATTTTCTCCAGAAATTGGCCACGTTAGAGTTAAACCTGACTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS TCA 90 bp TTCCTCTCAACCTCTAACTATGTCCCACTAGAAGACATCTTAAAGTaGAACTGTAAGGGAGGATATGAGTGGCATCTTTTTGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FLSTSNYVPLEDILK*NCKGGYEWHLFESL
Trigger: CAAGGACTCAAAAAGATGCCACTCATATCCTCCCTTACAGTTTCACTTTAAGATGTCTTCTAGTGGGACATAGTTAGAGGTTGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561290.1
CDS GCA 90 bp GCTACTATCCACAACCCTAACACATTAGCTGTTTTCCCTTCTTCATaGTCTTTTCCAGCCTCCGTTTACATTTATGGTAAGAACTGCATA +
Preference number: 5 (lower is better)
Translates to: ATIHNPNTLAVFPSS*SFPASVYIYGKNCI
Trigger: TATGCAGTTCTTACCATAAATGTAAACGGAGGCTGGAAAAGAGCATGAAGAAGGGAAAACAGCTAATGTGTTAGGGTTGTGGATAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CCA 90 bp CTAACGTGGCCAATTTCTGGAGAAAATGCTCAGAACACCCTGCAATaGGACCGAATTACAGGTTGTTTTTGTTGTTATTTCATTAAACTG +
Preference number: 5 (lower is better)
Translates to: LTWPISGENAQNTLQ*DRITGCFCCYFIKL
Trigger: CAGTTTAATGAAATAACAACAAAAACAACCTGTAATTCGGTCCCATTGCAGGGTGTTCTGAGCATTTTCTCCAGAAATTGGCCACGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS-3UTR CAA 90 bp TCAGTGACTGATAAAATGGTCTTCCTCTTCCTCTGGTCCATAAGGAAAAGGTGTAGACCTAAGGACAAATaGAATTCAGTGCTAAACCAT +
Preference number: 5 (lower is better)
Translates to: SVTDKMVFLFLWSIRKRCRPKDK*NSVLNH
Trigger: ATGGTTTAGCACTGAATTCAATTTGTCCTTAGGTCT...ACACCTTTTCCTTATGGACCAGAGGAAGAGGAAGACCATTTTATCAGTCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS-3UTR CAA 90 bp ATCAGCTGGCTTCATTCTATTCCATTCTATTTTGGCTGTTGCAGAAAAACATTCAGAGCAGAATCAGAATaGGTCCTGTTAAGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: ISWLHSIPFYFGCCRKTFRAESE*VLLSAD
Trigger: ATCTGCACTTAACAGGACCAATTCTGATTCTGCTCT...GAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 90 bp AAATGTCCCATATACCATGATAGTAACGTCCTCTTGCAAGGTCTTTaGGTGTGTATGTTTGGATACACTGGCATAATCTTTAACAACAAT +
Preference number: 5 (lower is better)
Translates to: KCPIYHDSNVLLQGL*VCMFGYTGIIFNNN
Trigger: ATTGTTGTTAAAGATTATGCCAGTGTATCCAAACATACACACTCAAAGACCTTGCAAGAGGACGTTACTATCATGGTATATGGGACATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CCA 72 bp GGACTCTGCGCGGGCAGAAGCGGGAGACGGCGGCCGTaGGGCCTGTACCTCGGCCCACCCGTCCGTCCACAG +
Preference number: 6 (lower is better)
Translates to: GLCAGRSGRRRP*GLYLGPPVRPQ
Trigger: CTGTGGACGGACGGGTGGGCCGAGGTACAGGCCCCACGGCCGCCGTCTCCCGCTTCTGCCCGCGCAGAGTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560098.5
CDS CCA 72 bp GGCCTTCCACGCCGGCAGAACAGCAGGGCTCGATGGTaGGGGATGTTCGGAGCGACCAGAAGCCGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: GLPRRQNSRARW*GMFGATRSRAA
Trigger: CGCGGCGCGGCTTCTGGTCGCTCCGAACATCCCCCACCATCGAGCCCTGCTGTTCTGCCGGCGTGGAAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558619.5
CDS CCA 72 bp CGCGGCCTTCCACGCCGGCAGAACAGCAGGGCTCGATaGTGGGGGATGTTCGGAGCGACCAGAAGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: RGLPRRQNSRAR*WGMFGATRSRA
Trigger: GGCGCGGCTTCTGGTCGCTCCGAACATCCCCCACCATCGAGCCCTGCTGTTCTGCCGGCGTGGAAGGCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558619.5
CDS GCA 72 bp GGGCCAGGAGAAAGCGTGAGAGGGCTGACGGGAGGCTaGCGACGCCGAGACGGGCCGCTCAGGTTTGTGGTG +
Preference number: 6 (lower is better)
Translates to: GPGESVRGLTGG*RRRDGPLRFVV
Trigger: CACCACAAACCTGAGCGGCCCGTCTCGGCGTCGGCAGCCTCCCGTCAGCCCTCTCACGCTTTCTCCTGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 72 bp CGCCCTGGCTTGTCCCCAGACCTTCGGTGGAGGGGGTaGAAGCGGTTCCTGGATGGCCTCTCCACCAGCCCG +
Preference number: 6 (lower is better)
Translates to: RPGLSPDLRWRG*KRFLDGLSTSP
Trigger: CGGGCTGGTGGAGAGGCCATCCAGGAACCGCTTCCACCCCCTCCACCGAAGGTCTGGGGACAAGCCAGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558619.5
ENST00000560927.1
CDS CCA 72 bp TCAAATTGTCGCCCTGGCTTGTCCCCAGACCTTCGGTaGAGGGGGTGGAAGCGGTTCCTGGATGGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SNCRPGLSPDLR*RGWKRFLDGLS
Trigger: GGAGAGGCCATCCAGGAACCGCTTCCACCCCCTCCACCGAAGGTCTGGGGACAAGCCAGGGCGACAATTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558619.5
CDS CCA 72 bp GATATTTGTCGCCCTGGCTTGTCCCCAGACCTTCGGTaGAGGGGGTGGAAGCGGTTCCTGGATGGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: DICRPGLSPDLR*RGWKRFLDGLS
Trigger: GGAGAGGCCATCCAGGAACCGCTTCCACCCCCTCCACCGAAGGTCTGGGGACAAGCCAGGGCGACAAATATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CAA 72 bp GGGTGCAGGGTAAGGGGGTGGCGGCGACACCTGGGCTaGAGCTTCTGTGGGCAGAAAGGAAAGTTGGCTTCG +
Preference number: 6 (lower is better)
Translates to: GCRVRGWRRHLG*SFCGQKGKLAS
Trigger: CGAAGCCAACTTTCCTTTCTGCCCACAGAAGCTCAAGCCCAGGTGTCGCCGCCACCCCCTTACCCTGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 72 bp CTCCACCCCTGCGCCCGAGTACTGAGAAGAATGAAGTaGGAGCACGGGCCCTCCTGGCACACTTCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: LHPCARVLRRMK*EHGPSWHTSVS
Trigger: GGACACAGAAGTGTGCCAGGAGGGCCCGTGCTCTCACTTCATTCTTCTCAGTACTCGGGCGCAGGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CCA 72 bp CTTCTGAAATTGAACACTCGACACGGAATCCCGTCGTaGTTCCAACAACCCGAGCCACCCCAGGGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: LLKLNTRHGIPS*FQQPEPPQGRA
Trigger: GGCCCGGCCCTGGGGTGGCTCGGGTTGTTGGAACCACGACGGGATTCCGTGTCGAGTGTTCAATTTCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558619.5
CDS CCA 72 bp CACCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTaGGACTATAGGTGCCCACCACCGAGCCTGGCTAAT +
Preference number: 6 (lower is better)
Translates to: HLPGSHHSPASA*DYRCPPPSLAN
Trigger: ATTAGCCAGGCTCGGTGGTGGGCACCTATAGTCCCAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CAA 72 bp ACCTCAGGCAGGCCTGCCAGCGCACTGTTGAGGTCTTaGAACAGGCTGGTGCTGGAGTCTGGCAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: TSGRPASALLRS*NRLVLESGRMV
Trigger: CACCATCCTGCCAGACTCCAGCACCAGCCTGTTCAAAGACCTCAACAGTGCGCTGGCAGGCCTGCCTGAGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420329.6
CDS GCA 72 bp TGGAGTGTCCACGTTCAGGCTGACCTCAGGCAGGCCTaGCAGCGCACTGTTGAGGTCTTTGAACAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: WSVHVQADLRQA*QRTVEVFEQAG
Trigger: ACCAGCCTGTTCAAAGACCTCAACAGTGCGCTGGCAGGCCTGCCTGAGGTCAGCCTGAACGTGGACACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CAA 72 bp ACCTCAGGCAGGCCTGCCAGCGCACTGTTGAGGTCTTaGAACAGGCTGGTGCTGGAGTCTTCTGGCAGGATG +
Preference number: 6 (lower is better)
Translates to: TSGRPASALLRS*NRLVLESSGRM
Trigger: CATCCTGCCAGAAGACTCCAGCACCAGCCTGTTCAAAGACCTCAACAGTGCGCTGGCAGGCCTGCCTGAGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268184.11
CDS GCA 72 bp TCCCCAAAGCCTTCGGCACAATGCTGGTCACACAGCTaGACCCACCACTGCCGCCCTGTAAACAGGACTGAT +
Preference number: 6 (lower is better)
Translates to: SPKPSAQCWSHS*THHCRPVNRTD
Trigger: ATCAGTCCTGTTTACAGGGCGGCAGTGGTGGGTGCAGCTGTGTGACCAGCATTGTGCCGAAGGCTTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CCA 72 bp CCAGGGAGGCTGGCAGGGGTGTCGAGTAGTGGAGGTTaGTTAGATCTGGCAATGACCCTCCAGTGTTCAAGG +
Preference number: 6 (lower is better)
Translates to: PGRLAGVSSSGG*LDLAMTLQCSR
Trigger: CCTTGAACACTGGAGGGTCATTGCCAGATCTAACCAACCTCCACTACTCGACACCCCTGCCAGCCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558005.1
ENST00000560320.1
CDS CCA 72 bp TATTCCCCACACTCATACTGCCAAAGTGGTGGTCGGTaGTGTCCAGGGAGGCTGGCAGGGGTGTCGAGTAGT +
Preference number: 6 (lower is better)
Translates to: YSPHSYCQSGGR*CPGRLAGVSSS
Trigger: ACTACTCGACACCCCTGCCAGCCTCCCTGGACACCACCGACCACCACTTTGGCAGTATGAGTGTGGGGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558005.1
ENST00000560320.1
CDS CCA 72 bp TTCACACTATTCCCCACACTCATACTGCCAAAGTGGTaGTCGGTGGTGTCCAGGGAGGCTGGCAGGGGTGTC +
Preference number: 6 (lower is better)
Translates to: FTLFPTLILPKW*SVVSREAGRGV
Trigger: GACACCCCTGCCAGCCTCCCTGGACACCACCGACCACCACTTTGGCAGTATGAGTGTGGGGAATAGTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS CCA 72 bp CCGAGACGGGCCGCTCAGGTTTGTGGTGGAAAGAGATaGGTTGCTAAGGGAAAACAGACGGAGCGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: PRRAAQVCGGKR*VAKGKQTERRV
Trigger: CACCCTTCGCTCCGTCTGTTTTCCCTTAGCAACCCATCTCTTTCCACCACAAACCTGAGCGGCCCGTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 72 bp TTGTACAAGGTCCTCATCACTGCGAATGGTCGCAGGTaGCATAGGGAGGGGAGAGCACAGGCTGGGCCATCA +
Preference number: 6 (lower is better)
Translates to: LYKVLITANGRR*HREGRAQAGPS
Trigger: TGATGGCCCAGCCTGTGCTCTCCCCTCCCTATGCCACCTGCGACCATTCGCAGTGATGAGGACCTTGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CCA 72 bp CTCTGGAACTCTGTGTTCTGCCAGGGACACAGTTTGTaGGGCAGGCCTGAGACCTTCCATGTAGCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: LWNSVFCQGHSL*GRPETFHVAGG
Trigger: CCCACCAGCTACATGGAAGGTCTCAGGCCTGCCCCACAAACTGTGTCCCTGGCAGAACACAGAGTTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558496.5
CDS CAA 72 bp GGGTCCAGCAGGCCCATGCTGGAGTCACTTAACATGTaGAGTCCGTCCAGGCTCAGGGGTTCAATCTGCAGC +
Preference number: 6 (lower is better)
Translates to: GSSRPMLESLNM*SPSRLRGSICS
Trigger: GCTGCAGATTGAACCCCTGAGCCTGGACGGACTCAACATGTTAAGTGACTCCAGCATGGGCCTGCTGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CAA 72 bp GGTTTCCCTAGAGTGCCCCCACAACTCCTGGCTCCCTaGTACAAGGTCCTCATCACTGCGAATGGTCGCAGG +
Preference number: 6 (lower is better)
Translates to: GFPRVPPQLLAP*YKVLITANGRR
Trigger: CCTGCGACCATTCGCAGTGATGAGGACCTTGTACAAGGGAGCCAGGAGTTGTGGGGGCACTCTAGGGAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CAA 90 bp TCAACAGAGGGGTCCAGCAGGCCCATGCTGGAGTCACTTAACATGTaGAGTCCGTCCAGGCTCAGGGGTTCAATCTGCAGCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: STEGSSRPMLESLNM*SPSRLRGSICSSSS
Trigger: GGAAGAGGAGCTGCAGATTGAACCCCTGAGCCTGGACGGACTCAACATGTTAAGTGACTCCAGCATGGGCCTGCTGGACCCCTCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 72 bp ATGGGGCCAGTGGGCTGGTTGAAGACAGCTGTCTGCTaGAACCTTGATGTGCTTCAGGGCCAGGAGAAAGCG +
Preference number: 6 (lower is better)
Translates to: MGPVGWLKTAVC*NLDVLQGQEKA
Trigger: CGCTTTCTCCTGGCCCTGAAGCACATCAAGGTTTCAGCAGACAGCTGTCTTCAACCAGCCCACTGGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CAA 72 bp CTGCTCTGGAACTCTGTGTTCTGCCAGGGACACAGTTaGTGGGGCAGGCCTGAGACCTTCCATGTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: LLWNSVFCQGHS*WGRPETFHVAG
Trigger: ACCAGCTACATGGAAGGTCTCAGGCCTGCCCCACAAACTGTGTCCCTGGCAGAACACAGAGTTCCAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558496.5
CDS TCA 72 bp AGTGGGCTGGTTGAAGACAGCTGTCTGCTGAAACCTTaGTGTGCTTCAGGGCCAGGAGAAAGCGTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: SGLVEDSCLLKP*CASGPGESVRG
Trigger: CCCTCTCACGCTTTCTCCTGGCCCTGAAGCACATCAAGGTTTCAGCAGACAGCTGTCTTCAACCAGCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 72 bp AGCTTCTGTGGGCAGAAAGGAAAGTTGGCTTCGGTCTaGGGACACCATCTGGGAGGTAGGATATGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SFCGQKGKLASV*GHHLGGRIWGQ
Trigger: CTGGCCCCATATCCTACCTCCCAGATGGTGTCCTCAGACCGAAGCCAACTTTCCTTTCTGCCCACAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 72 bp CAGGGGTCAGACCCACAAATCACTGACACCAAAGCCTaGGAGCTCTCCGCTAAGCTATGCTGCCTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: QGSDPQITDTKA*ELSAKLCCLSG
Trigger: TCCTGAGAGGCAGCATAGCTTAGCGGAGAGCTCTCAGGCTTTGGTGTCAGTGATTTGTGGGTCTGACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561218.5
CDS TCA 72 bp GATGGGTTGCTAAGGGAAAACAGACGGAGCGAAGGGTaGAGAGCAGATGCGTTGGGAACAGATGTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: DGLLRENRRSEG*RADALGTDVCG
Trigger: CCCACAGACATCTGTTCCCAACGCATCTGCTCTTCACCCTTCGCTCCGTCTGTTTTCCCTTAGCAACCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS TCA 72 bp CATCTGGGAGGTAGGATATGGGGCCAGTGGGCTGGTTaGAGACAGCTGTCTGCTGAAACCTTGATGTGCTTC +
Preference number: 6 (lower is better)
Translates to: HLGGRIWGQWAG*RQLSAETLMCF
Trigger: GAAGCACATCAAGGTTTCAGCAGACAGCTGTCTTCAACCAGCCCACTGGCCCCATATCCTACCTCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS GCA 72 bp CAGCTTGGTGAAATGACGGCTGAAACTCTGACGCACTaGTCCGCAGCTGGCTCACATTTGGTAAGGATCCTC +
Preference number: 6 (lower is better)
Translates to: QLGEMTAETLTH*SAAGSHLVRIL
Trigger: GAGGATCCTTACCAAATGTGAGCCAGCTGCGGAGCAGTGCGTCAGAGTTTCAGCCGTCATTTCACCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558619.5
ENST00000560927.1
CDS CCA 72 bp TGGACTGCTGGTCAAAACCCACATCTGGGAAGAAGTTaGTCAAAGATGAGCCCTGGGCCGGGAGAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: WTAGQNPHLGRS*SKMSPGPGEAE
Trigger: TTCAGCTTCTCCCGGCCCAGGGCTCATCTTTGACCAACTTCTTCCCAGATGTGGGTTTTGACCAGCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 72 bp GGTGTTCGGGAGACTCCCGCAGTTGGAATACGGGCTTaGTCTCAAATGAAAAGAGTCCTGCAGTTCTCGGGA +
Preference number: 6 (lower is better)
Translates to: GVRETPAVGIRA*SQMKRVLQFSG
Trigger: TCCCGAGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CCA 72 bp AAAGTTGGGGTTTCCCTAGAGTGCCCCCACAACTCCTaGCTCCCTTGTACAAGGTCCTCATCACTGCGAATG +
Preference number: 6 (lower is better)
Translates to: KVGVSLECPHNS*LPCTRSSSLRM
Trigger: CATTCGCAGTGATGAGGACCTTGTACAAGGGAGCCAGGAGTTGTGGGGGCACTCTAGGGAAACCCCAACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CAA 72 bp CAAATGAAAAGAGTCCTGCAGTTCTCGGGAACCTTGTaGCACCAGAGGCACCTGTTGAGGAAAGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: QMKRVLQFSGTL*HQRHLLRKGRA
Trigger: GGCCCTGCCTTTCCTCAACAGGTGCCTCTGGTGCAACAAGGTTCCCGAGAACTGCAGGACTCTTTTCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CAA 72 bp TGGTGTTCGGGAGACTCCCGCAGTTGGAATACGGGCTaGGTCTCAAATGAAAAGAGTCCTGCAGTTCTCGGG +
Preference number: 6 (lower is better)
Translates to: WCSGDSRSWNTG*VSNEKSPAVLG
Trigger: CCCGAGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS CAA 72 bp ATAAATACAGAATCTGGGCAGGGCTCAGGAACTGCCTaGTCGGGGCAGCCTGGAAGCCAGTCATTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: INTESGQGSGTA*SGQPGSQSFLS
Trigger: GGAGAGAAATGACTGGCTTCCAGGCTGCCCCGACAAGGCAGTTCCTGAGCCCTGCCCAGATTCTGTATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558496.5
CDS CAA 90 bp CTGGCAGGATGGTGTTCGGGAGACTCCCGCAGTTGGAATACGGGCTaGGTCTCAAATGAAAAGAGTCCTGCAGTTCTCGGGAACCTTGTT +
Preference number: 6 (lower is better)
Translates to: LAGWCSGDSRSWNTG*VSNEKSPAVLGNLV
Trigger: AACAAGGTTCCCGAGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACACCATCCTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 72 bp AGGCTGCTGCCTTGGCCAACTCTCATCCAGAGGCTGTaGGGAATAATTGGCTCCAAAAGCACTGGAGTGTTC +
Preference number: 6 (lower is better)
Translates to: RLLPWPTLIQRL*GIIGSKSTGVF
Trigger: GAACACTCCAGTGCTTTTGGAGCCAATTATTCCTCACAGCCTCTGGATGAGAGTTGGCCAAGGCAGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558496.5
ENST00000561255.5
CDS GCA 72 bp CCTCGAGTTACTGCCTCAATCCATCAACACAGGGACTaGTGTTCCTCTCAACCTGAAACTCTGACGCACTGC +
Preference number: 6 (lower is better)
Translates to: PRVTASIHQHRD*CSSQPETLTHC
Trigger: GCAGTGCGTCAGAGTTTCAGGTTGAGAGGAACAGCAGTCCCTGTGTTGATGGATTGAGGCAGTAACTCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560098.5
CDS CCA 72 bp CTTCTGGCAGGATGGTGTTCGGGAGACTCCCGCAGTTaGAATACGGGCTTGGTCTCAAATGAAAAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: LLAGWCSGDSRS*NTGLVSNEKSP
Trigger: AGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACACCATCCTGCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268184.11
CDS CCA 72 bp AGTCTGGCAGGATGGTGTTCGGGAGACTCCCGCAGTTaGAATACGGGCTTGGTCTCAAATGAAAAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: SLAGWCSGDSRS*NTGLVSNEKSP
Trigger: AGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACACCATCCTGCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420329.6
CDS CAA 90 bp CCAGAGGAGCTTCTTATACCCAGGTGGGTCATAGCAGCTGGGATGTaGTTCACACTATTCCCCACACTCATACTGCCAAAGTGGTGGTCG +
Preference number: 6 (lower is better)
Translates to: PEELLIPRWVIAAGM*FTLFPTLILPKWWS
Trigger: CGACCACCACTTTGGCAGTATGAGTGTGGGGAATAGTGTGAACAACATCCCAGCTGCTATGACCCACCTGGGTATAAGAAGCTCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS TCA 72 bp AGACTCCCGCAGTTGGAATACGGGCTTGGTCTCAAATaGAAAGAGTCCTGCAGTTCTCGGGAACCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: RLPQLEYGLGLK*KESCSSREPCC
Trigger: GCAACAAGGTTCCCGAGAACTGCAGGACTCTTTTCATTTGAGACCAAGCCCGTATTCCAACTGCGGGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 72 bp ATTGCCACCTCCAACATCACAGGATCGAGGGCGTCCTaGCAGGGACTGAATCTTCCCCATGTCCATTATTCT +
Preference number: 6 (lower is better)
Translates to: IATSNITGSRAS*QGLNLPHVHYS
Trigger: AGAATAATGGACATGGGGAAGATTCAGTCCCTGTCAGGACGCCCTCGATCCTGTGATGTTGGAGGTGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561255.5
CDS CCA 72 bp AAGGAAGAGGAAAGCACAGTCTTATTGAGCGTGGCTTaGATGGAGGGGTTACTCCGAGAACTCTGGAGACCA +
Preference number: 6 (lower is better)
Translates to: KEEESTVLLSVA*MEGLLRELWRP
Trigger: TGGTCTCCAGAGTTCTCGGAGTAACCCCTCCATCCAAGCCACGCTCAATAAGACTGTGCTTTCCTCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS CCA 72 bp TTCCATGTAGCTGGTGGGGTAAGTGGGCTCGGAGTCTaGTTAACAGAACCCACCTACCAAGACAAGTTTCAG +
Preference number: 6 (lower is better)
Translates to: FHVAGGVSGLGV*LTEPTYQDKFQ
Trigger: CTGAAACTTGTCTTGGTAGGTGGGTTCTGTTAACCAGACTCCGAGCCCACTTACCCCACCAGCTACATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558496.5
CDS TCA 72 bp AGGCTGCTGCCTTGGCCAACTCTCATCCAGAGGCTGTaGGGAATAATTGGCTCCAAAAGCACTACCATCAAA +
Preference number: 6 (lower is better)
Translates to: RLLPWPTLIQRL*GIIGSKSTTIK
Trigger: TTTGATGGTAGTGCTTTTGGAGCCAATTATTCCTCACAGCCTCTGGATGAGAGTTGGCCAAGGCAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558005.1
ENST00000558619.5
ENST00000561119.5
CDS GCA 72 bp CAGTTCTGTGCAGGAAAATCTTCCTCCTCGAGTTACTaGCTCAATCCATCAACACAGGGACTGCTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: QFCAGKSSSSSY*LNPSTQGLLFL
Trigger: GAGGAACAGCAGTCCCTGTGTTGATGGATTGAGGCAGTAACTCGAGGAGGAAGATTTTCCTGCACAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560098.5
ENST00000561290.1
CDS GCA 72 bp TTCGGTCTGAGGACACCATCGCGGTGTTCTGTGCAATaGTGTGAGAAGCCCGTTTCTCATCCTTCAAAGTAT +
Preference number: 6 (lower is better)
Translates to: FGLRTPSRCSVQ*CEKPVSHPSKY
Trigger: ATACTTTGAAGGATGAGAAACGGGCTTCTCACAGCATTGCACAGAACACCGCGATGGTGTCCTCAGACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558167.1
CDS CCA 72 bp TTGGCCAACTCTCATCCAGAGGCTGTGAGGAATAATTaGCTCCAAAAGCACTGGAGTGTTCTGGGAAGGATG +
Preference number: 6 (lower is better)
Translates to: LANSHPEAVRNN*LQKHWSVLGRM
Trigger: CATCCTTCCCAGAACACTCCAGTGCTTTTGGAGCCAATTATTCCTCACAGCCTCTGGATGAGAGTTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558496.5
ENST00000561255.5
CDS CAA 90 bp GATGTCTGTGGGTGGTTATTTAAGGAAGAGGAAAGCACAGTCTTATaGAGCGTGGCTTGGATGGAGGGGTTACTCCGAGAACTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: DVCGWLFKEEESTVL*SVAWMEGLLRELWR
Trigger: TCTCCAGAGTTCTCGGAGTAACCCCTCCATCCAAGCCACGCTCAATAAGACTGTGCTTTCCTCTTCCTTAAATAACCACCCACAGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS TCA 72 bp TCTGAGGACACCATCGCGGTGTTCTGTGCAATGCTGTaGGAAGCCCGTTTCTCATCCTTCAAAGTATATCTC +
Preference number: 6 (lower is better)
Translates to: SEDTIAVFCAML*EARFSSFKVYL
Trigger: GAGATATACTTTGAAGGATGAGAAACGGGCTTCTCACAGCATTGCACAGAACACCGCGATGGTGTCCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558167.1
CDS GCA 72 bp TTTACATGTAGAATTCTCAGACTTCTTGGAGTTCTGTaGCAGAATGCACAGGGAGACAGCCTGGCCCTCAGT +
Preference number: 6 (lower is better)
Translates to: FTCRILRLLGVL*QNAQGDSLALS
Trigger: ACTGAGGGCCAGGCTGTCTCCCTGTGCATTCTGGCACAGAACTCCAAGAAGTCTGAGAATTCTACATGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560320.1
CDS CCA 72 bp TTGGCCAACTCTCATCCAGAGGCTGTGAGGAATAATTaGCTCCAAAAGCACTACCATCAAATTGTCGCCCTG +
Preference number: 6 (lower is better)
Translates to: LANSHPEAVRNN*LQKHYHQIVAL
Trigger: CAGGGCGACAATTTGATGGTAGTGCTTTTGGAGCCAATTATTCCTCACAGCCTCTGGATGAGAGTTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558005.1
ENST00000558619.5
ENST00000561119.5
CDS CCA 72 bp AGAGGAGCTTCTTATACCCAGGTGGGTCATAGCAGCTaGGATGTTGTTCACACTATTCCCCACACTCATACT +
Preference number: 6 (lower is better)
Translates to: RGASYTQVGHSS*DVVHTIPHTHT
Trigger: AGTATGAGTGTGGGGAATAGTGTGAACAACATCCCAGCTGCTATGACCCACCTGGGTATAAGAAGCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000560320.1
CDS CAA 90 bp GGCGTCCTGACAGGGACTGAATCTCCTTGGTCTCCCACAGTTGTTTaGGCAGTGGCTTCGGAACATTTAACAGATTCTCTTCTTTCAATG +
Preference number: 6 (lower is better)
Translates to: GVLTGTESPWSPTVV*AVASEHLTDSLLSM
Trigger: CATTGAAAGAAGAGAATCTGTTAAATGTTCCGAAGCCACTGCCAAAACAACTGTGGGAGACCAAGGAGATTCAGTCCCTGTCAGGACGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558005.1
ENST00000560047.1
CDS CAA 72 bp GTGAAGCCAGATTTACATGTAGAATTCTCAGACTTCTaGGAGTTCTGTGCCAGAATGCACAGGGAGACAGCC +
Preference number: 6 (lower is better)
Translates to: VKPDLHVEFSDF*EFCARMHRETA
Trigger: GGCTGTCTCCCTGTGCATTCTGGCACAGAACTCCAAGAAGTCTGAGAATTCTACATGTAAATCTGGCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560320.1
CDS GCA 72 bp AGGTTTAACTCTAACGTGGCCAATTTCTGGAGAAAATaGTCAGAACACCCTGCAATGGGACCGAATTACAGG +
Preference number: 6 (lower is better)
Translates to: RFNSNVANFWRK*SEHPAMGPNYR
Trigger: CCTGTAATTCGGTCCCATTGCAGGGTGTTCTGAGCATTTTCTCCAGAAATTGGCCACGTTAGAGTTAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CAA 72 bp ACAGGGACTGAATCTCCTTGGTCTCCCACAGTTGTTTaGGCAGTGGCTTCGGAACATTTAACAGATTCTCTT +
Preference number: 6 (lower is better)
Translates to: TGTESPWSPTVV*AVASEHLTDSL
Trigger: AAGAGAATCTGTTAAATGTTCCGAAGCCACTGCCAAAACAACTGTGGGAGACCAAGGAGATTCAGTCCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268184.11
ENST00000420329.6
ENST00000558005.1
ENST00000560047.1
CDS GCA 72 bp CGTGGCCAATTTCTGGAGAAAATGCTCAGAACACCCTaGAATGGGACCGAATTACAGGTTGTTTTTGTTGTT +
Preference number: 6 (lower is better)
Translates to: RGQFLEKMLRTP*NGTELQVVFVV
Trigger: AACAACAAAAACAACCTGTAATTCGGTCCCATTGCAGGGTGTTCTGAGCATTTTCTCCAGAAATTGGCCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CAA 90 bp CGAAAGCCCGTGGTATCAGCTGGCTTCATTCTATTCCATTCTATTTaGGCTGTTGCAGAAAAACATTCTTCTGTTCCACTGCCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: RKPVVSAGFILFHSI*AVAEKHSSVPLPSV
Trigger: AACAGAAGGCAGTGGAACAGAAGAATGTTTTTCTGCAACAGCCAAAATAGAATGGAATAGAATGAAGCCAGCTGATACCACGGGCTTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268184.11
ENST00000420329.6
CDS TCA 72 bp ATCACACCCTCAAGGTTTCCGGTGCTTTCTGGGTTTTaGTTACTCTATTTTCGGAAAGAGCTTACCCATGTT +
Preference number: 6 (lower is better)
Translates to: ITPSRFPVLSGF*LLYFRKELTHV
Trigger: AACATGGGTAAGCTCTTTCCGAAAATAGAGTAATCAAAACCCAGAAAGCACCGGAAACCTTGAGGGTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CCA 72 bp GTAAGTGATCACACCCTCAAGGTTTCCGGTGCTTTCTaGGTTTTGATTACTCTATTTTCGGAAAGAGCTTAC +
Preference number: 6 (lower is better)
Translates to: VSDHTLKVSGAF*VLITLFSERAY
Trigger: GTAAGCTCTTTCCGAAAATAGAGTAATCAAAACCCAGAAAGCACCGGAAACCTTGAGGGTGTGATCACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS GCA 72 bp CCAAATGTCCCATATACCATGATAGTAACGTCCTCTTaGAAGGTCTTTGAGTGTGTATGTTTGGATACACTG +
Preference number: 6 (lower is better)
Translates to: PNVPYTMIVTSS*KVFECVCLDTL
Trigger: CAGTGTATCCAAACATACACACTCAAAGACCTTGCAAGAGGACGTTACTATCATGGTATATGGGACATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS CAA 90 bp ATCAAAGAAACACTCCAAGTCTTTTGCCTGAATATTCTTGGCAATTaGGACAACGGTTTGATGTACCACTCCATCCTGACATGTACAAAT +
Preference number: 6 (lower is better)
Translates to: IKETLQVFCLNILGN*DNGLMYHSILTCTN
Trigger: ATTTGTACATGTCAGGATGGAGTGGTACATCAAACCGTTGTCCAAATTGCCAAGAATATTCAGGCAAAAGACTTGGAGTGTTTCTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS TCA 72 bp ATATACCATGATAGTAACGTCCTCTTGCAAGGTCTTTaGGTGTGTATGTTTGGATACACTGGCATAATCTTT +
Preference number: 6 (lower is better)
Translates to: IYHDSNVLLQGL*VCMFGYTGIIF
Trigger: AAAGATTATGCCAGTGTATCCAAACATACACACTCAAAGACCTTGCAAGAGGACGTTACTATCATGGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560927.1
CDS TCA 72 bp TTAATATATAAAACTGGCCACAATTTGGCTCCTTCCTaGTTGCTCAGCCATGTGTTTATTGTCATTCTACTT +
Preference number: 6 (lower is better)
Translates to: LIYKTGHNLAPS*LLSHVFIVILL
Trigger: AAGTAGAATGACAATAAACACATGGCTGAGCAATCAGGAAGGAGCCAAATTGTGGCCAGTTTTATATATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558496.5
CDS TCA 72 bp AAATTAGTAAGCCAAGAGATCAATGTGCTAATTCATTaGCACAAGCGCGATAATTTTTACTTGAAACGTCCT +
Preference number: 6 (lower is better)
Translates to: KLVSQEINVLIH*HKRDNFYLKRP
Trigger: AGGACGTTTCAAGTAAAAATTATCGCGCTTGTGTCAATGAATTAGCACATTGATCTCTTGGCTTACTAATTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561119.5