RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRTC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000160741

Ensembl transcript IDs: ENST00000303569.10, ENST00000368630.7, ENST00000368633.2, ENST00000461638.6, ENST00000467860.1, ENST00000476883.5, ENST00000487235.5, ENST00000492073.1, ENST00000524997.1

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGAGGAAGAGGAGGAGGAGAGAGCCGGAGCACTGAGTGAGGGGTaGCCCAGGGAGGTGGTGGGCAGTACATGGCGGGCCAAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: EEEEEEERAGALSEG*PREVVGSTWRAKEE
Trigger: CTCCTCCTTGGCCCGCCATGTACTGCCCACCACCTCCCTGGGCCACCCCTCACTCAGTGCTCCGGCTCTCTCCTCCTCCTCTTCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR TCA 90 bp ATGAAGTGGAGGAGGAGGAAGAGGAGGAGGAGAGAGCCGGAGCACTaGGTGAGGGGTGGCCCAGGGAGGTGGTGGGCAGTACATGGCGGG +
Preference number: 1 (lower is better)
Translates to: MKWRRRKRRRREPEH*VRGGPGRWWAVHGG
Trigger: CCCGCCATGTACTGCCCACCACCTCCCTGGGCCACCCCTCACTCAGTGCTCCGGCTCTCTCCTCCTCCTCTTCCTCCTCCTCCACTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR CCA 90 bp CATTGGCCGGTGGTAAGACTGTTGCCCATGCCCACTGGGCCCAGGTaGGTACGGTGTCCCATAATGAGACTGCCTGCCTGGGGGCTGCCC +
Preference number: 1 (lower is better)
Translates to: HWPVVRLLPMPTGPR*VRCPIMRLPAWGLP
Trigger: GGGCAGCCCCCAGGCAGGCAGTCTCATTATGGGACACCGTACCCACCTGGGCCCAGTGGGCATGGGCAACAGTCTTACCACCGGCCAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR TCA 90 bp AGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATaGCTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGGGTCACT +
Preference number: 1 (lower is better)
Translates to: RDGDEVPSLEPVTAE*LLHSRIRQQGTGVT
Trigger: AGTGACCCCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
3UTR-3UTR TCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGCCGGAGCACTGAGTaGGGGGTGGCCCAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSSRSTE*GVAQGG
Trigger: ACCTCCCTGGGCCACCCCTCACTCAGTGCTCCGGCT...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR TCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGAGAGCCGGAGCACTaGGTGAGGGGTGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSREPEH*VRGGPG
Trigger: CCCTGGGCCACCCCTCACTCAGTGCTCCGGCTCTCT...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR TCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCGCAAACTCAGGGGGCTaGGGGGCACACGGCGGTGGT +
Preference number: 2 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSANSGG*GAHGGG
Trigger: ACCACCGCCGTGTGCCCCTCAGCCCCCTGAGTTTGC...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR GCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACCTGGGCCAGAGCATGTaGATGCCAGGAAGAGAACGG +
Preference number: 2 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHLGQSM*MPGRER
Trigger: CCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAG...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
3UTR-3UTR TCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCTGCACTGAACAAGACTaGGAGGGCAGCCCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSCTEQD*EGSPGC
Trigger: GCAGCCAGGGCTGCCCTCTCAGTCTTGTTCAGTGCA...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR TCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACCCAGATTCCCCAGGTTaGAGTCACTCATTGGCCGGT +
Preference number: 2 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHPDSPG*SHSLAG
Trigger: ACCGGCCAATGAGTGACTTCAACCTGGGGAATCTGG...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR GCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGTGGTGGGGGAAAGTaGAGGTTGGTGAGGTCAGGT +
Preference number: 2 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHSGGGK*RLVRSG
Trigger: ACCTGACCTCACCAACCTGCACTTTCCCCCACCACT...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR GCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGGCCAGAGCATGTGCATaGCAGGAAGAGAACGGGTCA +
Preference number: 2 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRARACA*QEENGS
Trigger: TGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGC...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
3UTR-3UTR GCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCTGAACTGCTCCAGCTaGTGGGCCAGAGCATGTGCA +
Preference number: 2 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTLNCSS*WARACA
Trigger: TGCACATGCTCTGGCCCAGCAGCTGGAGCAGTTCAG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461638.6
3UTR-3UTR CCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCCCCACTGGGCCCAGGTaGGTACGGTGTCCCATAATG +
Preference number: 2 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSPTGPR*VRCPIM
Trigger: CATTATGGGACACCGTACCCACCTGGGCCCAGTGGG...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR CCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCTTAGGCCCTGAGCCATaGCGGGAACAGTGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSLGPEP*REQWVK
Trigger: CTTGACCCACTGTTCCCGCCATGGCTCAGGGCCTAA...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
3UTR-3UTR TCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACGGAAGACAAGGTGGGTaGCATTGTTGGCGAAAACTG +
Preference number: 2 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHGRQGG*HCWRKL
Trigger: CAGTTTTCGCCAACAATGTCACCCACCTTGTCTTCC...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACTCTCCATGCTGAACTaGTCCAGCTGCTGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKLSMLN*SSCWAR
Trigger: TCTGGCCCAGCAGCTGGAGCAGTTCAGCATGGAGAG...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461638.6
3UTR-3UTR CCA 90 bp CTGTATGGGTATGGGGGTAACCGCTGGTCAGTGGACAGTTTACTGGTATCCAGGCCTTCTGGCGTCGGCTaGGCCCGCGAGCAAACTCAG +
Preference number: 2 (lower is better)
Translates to: LYGYGGNRWSVDSLLVSRPSGVG*AREQTQ
Trigger: CTGAGTTTGCTCGCGGGCCCAGCCGACGCCAGAAGG...CCTGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR CCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCCCATGGCGGGAACAGTaGGTCAAGTTCTGGTGGTTG +
Preference number: 2 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSPWREQ*VKFWWL
Trigger: CAACCACCAGAACTTGACCCACTGTTCCCGCCATGG...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
3UTR-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAAACTGCTCCAGCTGCTaGGCCAGAGCATGTGCATGC +
Preference number: 2 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKNCSSC*ARACAC
Trigger: GCATGCACATGCTCTGGCCCAGCAGCTGGAGCAGTT...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461638.6
3UTR-3UTR CCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCGGCACATTGGCAGGCTaGTCAGGAGATGGAAAGATG +
Preference number: 2 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSGTLAG*SGDGKM
Trigger: CATCTTTCCATCTCCTGACCAGCCTGCCAATGTGCC...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR CCA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACGGAGGACAGGCACATTaGCAGGCTGGTCAGGAGATG +
Preference number: 2 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDGGQAH*QAGQEM
Trigger: CATCTCCTGACCAGCCTGCCAATGTGCCTGTCCTCC...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR CCA 90 bp CTGTATGGGTATGGGGGTAACCGCTGGTCAGTGGACAGTTTACTGGTATCCAGGTGGTGCATCATAGCCTaGGCCCAGGCCCATGCCCCT +
Preference number: 2 (lower is better)
Translates to: LYGYGGNRWSVDSLLVSRWCIIA*AQAHAP
Trigger: AGGGGCATGGGCCTGGGCCCAGGCTATGATGCACCA...CCTGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR CCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCTATGGGGGTAACCGCTaGTCAGTGGACAGTTTACTG +
Preference number: 2 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSYGGNR*SVDSLL
Trigger: CAGTAAACTGTCCACTGACCAGCGGTTACCCCCATA...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR CCA 72 bp GTGGTAAGACTGTTGCCCATGCCCACTGGGCCCAGGTaGGTACGGTGTCCCATAATGAGACTGCCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: VVRLLPMPTGPR*VRCPIMRLPAW
Trigger: CCAGGCAGGCAGTCTCATTATGGGACACCGTACCCACCTGGGCCCAGTGGGCATGGGCAACAGTCTTACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR-3UTR CAA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACTCAATAGCAGGTACTTaGGGGTCCATTTCACCATCC +
Preference number: 3 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHSIAGT*GSISPS
Trigger: GGATGGTGAAATGGACCCCAAAGTACCTGCTATTGA...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR TCA 72 bp AGAAGCAGGGTAAGAGGGGGCGCCCAAAACAGGAGATaGAGTGGAGGAGGAGGAAGAGGAGGAGGAGAGAGC +
Preference number: 3 (lower is better)
Translates to: RSRVRGGAQNRR*SGGGGRGGGES
Trigger: GCTCTCTCCTCCTCCTCTTCCTCCTCCTCCACTTCATCTCCTGTTTTGGGCGCCCCCTCTTACCCTGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303569.10
3UTR CCA 72 bp TCATTGGCCGGTGGTAAGACTGTTGCCCATGCCCACTaGGCCCAGGTGGGTACGGTGTCCCATAATGAGACT +
Preference number: 3 (lower is better)
Translates to: SLAGGKTVAHAH*AQVGTVSHNET
Trigger: AGTCTCATTATGGGACACCGTACCCACCTGGGCCCAGTGGGCATGGGCAACAGTCTTACCACCGGCCAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR TCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGAGCCGGAGCACTGAGTaGGGGGTGGCCCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRSRSTE*GVAQGG
Trigger: ACCTCCCTGGGCCACCCCTCACTCAGTGCTCCGGCT...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGAGAGCCGGAGCACTaGGTGAGGGGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHREPEH*VRGGPG
Trigger: CCCTGGGCCACCCCTCACTCAGTGCTCCGGCTCTCT...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGAGGGGCTGGCACTaGCCACCCCTAGGCATCCGG +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHRRGWH*PPLGIR
Trigger: CCGGATGCCTAGGGGTGGGCAGTGCCAGCCCCTCCT...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp GGGTGGCCCAGGGAGGTGGTGGGCAGTACATGGCGGGCCAAGGAGGAGGCAGGCTTAGGCCCTGAGCCATaGCGGGAACAGTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GWPREVVGSTWRAKEEAGLGPEP*REQWVK
Trigger: CTTGACCCACTGTTCCCGCCATGGCTCAGGGCCTAA...GCCTGCCTCCTCCTTGGCCCGCCATGTACTGCCCACCACCTCCCTGGGCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR TCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCAGAGAGCCGGAGCACTaGGTGAGGGGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTREPEH*VRGGPG
Trigger: CCCTGGGCCACCCCTCACTCAGTGCTCCGGCTCTCT...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGCAAACTCAGGGGGCTaGGGGGCACACGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTANSGG*GAHGGG
Trigger: ACCACCGCCGTGTGCCCCTCAGCCCCCTGAGTTTGC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACTGCCTGCCTGGGGGCTaGCCACCTGAGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHCLPGG*PPEDCT
Trigger: AGTGCAGTCCTCAGGTGGGCAGCCCCCAGGCAGGCA...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCAGGAGGGGCTGGCACTaGCCACCCCTAGGCATCCGG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTRRGWH*PPLGIR
Trigger: CCGGATGCCTAGGGGTGGGCAGTGCCAGCCCCTCCT...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGCTGTTGGGACCTTCTaGCGTCGGCTGGGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTAVGTF*RRLGPR
Trigger: TCGCGGGCCCAGCCGACGCCAGAAGGTCCCAACAGC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACGTTGCCCATGCCCACTaGGCCCAGGTGGGTACGGTG +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHVAHAH*AQVGTV
Trigger: CACCGTACCCACCTGGGCCCAGTGGGCATGGGCAAC...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAAGCCGGAGCACTGAGTaGGGGGTGGCCCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQASRSTE*GVAQGG
Trigger: ACCTCCCTGGGCCACCCCTCACTCAGTGCTCCGGCT...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGGCTGGGGCTGAGGACTaGTCAGGGAAGCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRAGAED*SGKPGG
Trigger: ACCTCCAGGCTTCCCTGAGCAGTCCTCAGCCCCAGC...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGTGGTGCATCATAGCCTaGGCCCAGGCCCATGCCCCT +
Preference number: 4 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRWCIIA*AQAHAP
Trigger: AGGGGCATGGGCCTGGGCCCAGGCTATGATGCACCA...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGGTGGCCCAGGGAGGTaGTGGGCAGTACATGGCGGG +
Preference number: 4 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQAGGPGR*WAVHGG
Trigger: CCCGCCATGTACTGCCCACCACCTCCCTGGGCCACC...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCCTTCTGGCGTCGGCTaGGCCCGCGAGCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTPSGVG*AREQTQ
Trigger: CTGAGTTTGCTCGCGGGCCCAGCCGACGCCAGAAGG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCTGTTGGGACCTTCTaGCGTCGGCTGGGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQAAVGTF*RRLGPR
Trigger: TCGCGGGCCCAGCCGACGCCAGAAGGTCCCAACAGC...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp GGGTGGCCCAGGGAGGTGGTGGGCAGTACATGGCGGGCCAAGGAGGAGGCAGGCAGGCAGAACCAGACTTaGGGAGCTGTATGGGTATGG +
Preference number: 4 (lower is better)
Translates to: GWPREVVGSTWRAKEEAGRQNQT*GAVWVW
Trigger: CCATACCCATACAGCTCCCCAAGTCTGGTTCTGCCT...GCCTGCCTCCTCCTTGGCCCGCCATGTACTGCCCACCACCTCCCTGGGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGTTGCCCATGCCCACTaGGCCCAGGTGGGTACGGTG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTVAHAH*AQVGTV
Trigger: CACCGTACCCACCTGGGCCCAGTGGGCATGGGCAAC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCAAGGTGTGGGGATCCTaGGGGCCACCCATTGGCCCC +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTKVWGS*GPPIGP
Trigger: GGGGCCAATGGGTGGCCCCCAGGATCCCCACACCTT...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACTGGTGGTTGAAGGTGTaGGGATCCTGGGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHWWLKV*GSWGPP
Trigger: GGGTGGCCCCCAGGATCCCCACACCTTCAACCACCA...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAAGCCGGAGCACTGAGTaGGGGGTGGCCCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKSRSTE*GVAQGG
Trigger: ACCTCCCTGGGCCACCCCTCACTCAGTGCTCCGGCT...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGCAAACTCAGGGGGCTaGGGGGCACACGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKANSGG*GAHGGG
Trigger: ACCACCGCCGTGTGCCCCTCAGCCCCCTGAGTTTGC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGGGGGACGCCCTGAGTaGTGGAAGACAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTGGRPE*WKTRWV
Trigger: CACCCACCTTGTCTTCCATCACTCAGGGCGTCCCCC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACTCCAGGGGGACGCCCTaGGTGATGGAAGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHSRGTP*VMEDKV
Trigger: CACCTTGTCTTCCATCACTCAGGGCGTCCCCCTGGA...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGCCGGTCACTGCGGAATaGCTCCTCCACAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRPVTAE*LLHSRI
Trigger: GATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGG...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCTGCCTGCCTGGGGGCTaGCCACCTGAGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSCLPGG*PPEDCT
Trigger: AGTGCAGTCCTCAGGTGGGCAGCCCCCAGGCAGGCA...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAAGGAGGGGCTGGCACTaGCCACCCCTAGGCATCCGG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKRRGWH*PPLGIR
Trigger: CCGGATGCCTAGGGGTGGGCAGTGCCAGCCCCTCCT...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCTGGTGCATCATAGCCTaGGCCCAGGCCCATGCCCCT +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTWCIIA*AQAHAP
Trigger: AGGGGCATGGGCCTGGGCCCAGGCTATGATGCACCA...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGTGGTGGGCAGTACATaGCGGGCCAAGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTVVGST*RAKEEA
Trigger: TGCCTCCTCCTTGGCCCGCCATGTACTGCCCACCAC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGGTGGCCCAGGGAGGTaGTGGGCAGTACATGGCGGG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKGGPGR*WAVHGG
Trigger: CCCGCCATGTACTGCCCACCACCTCCCTGGGCCACC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAAAGGTGTGGGGATCCTaGGGGCCACCCATTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQAKVWGS*GPPIGP
Trigger: GGGGCCAATGGGTGGCCCCCAGGATCCCCACACCTT...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGGCCCATGCCCCTGCTaGTGCCCAGGTGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKGPCPC*CPGESW
Trigger: CCATGACTCACCTGGGCATCAGCAGGGGCATGGGCC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACAGAGAGCCGGAGCACTaGGTGAGGGGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDREPEH*VRGGPG
Trigger: CCCTGGGCCACCCCTCACTCAGTGCTCCGGCTCTCT...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCTGCACTGAACAAGACTaGGAGGGCAGCCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTCTEQD*EGSPGC
Trigger: GCAGCCAGGGCTGCCCTCTCAGTCTTGTTCAGTGCA...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCCGGTCACTGCGGAATaGCTCCTCCACAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTPVTAE*LLHSRI
Trigger: GATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAATGCCTGCCTGGGGGCTaGCCACCTGAGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKCLPGG*PPEDCT
Trigger: AGTGCAGTCCTCAGGTGGGCAGCCCCCAGGCAGGCA...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACGGGATGGTGATGAGGTaGCCTCATTGGAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHGMVMR*PHWSRS
Trigger: TGACCGGCTCCAATGAGGGCACCTCATCACCATCCC...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGGGCTCTCTCCTCCACTaGAAGGGGAAGAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRGSLLH*KGKSGE
Trigger: CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCC...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCTTCGAGGATCTCGCTaGACCCGTTCCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTLRGSR*TRSTSP
Trigger: TGGGCTGGTGGAACGGGTGCAGCGAGATCCTCGAAG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCATGGTGCATCATAGCCTaGGCCCAGGCCCATGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQAWCIIA*AQAHAP
Trigger: AGGGGCATGGGCCTGGGCCCAGGCTATGATGCACCA...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCTTCTGGCGTCGGCTaGGCCCGCGAGCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKPSGVG*AREQTQ
Trigger: CTGAGTTTGCTCGCGGGCCCAGCCGACGCCAGAAGG...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGAAGTCCCTTCTGGCGTCGGCTaGGCCCGCGAGCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: LLGQSMCMPGRERVKAEVPSGVG*AREQTQ
Trigger: CTGAGTTTGCTCGCGGGCCCAGCCGACGCCAGAAGG...GACTTCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR CCA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACGCTGTTGGGACCTTCTaGCGTCGGCTGGGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDAVGTF*RRLGPR
Trigger: TCGCGGGCCCAGCCGACGCCAGAAGGTCCCAACAGC...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCCCACTGGGCCCAGGTaGGTACGGTGTCCCATAATG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTPTGPR*VRCPIM
Trigger: CATTATGGGACACCGTACCCACCTGGGCCCAGTGGG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGTTGCCCATGCCCACTaGGCCCAGGTGGGTACGGTG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKVAHAH*AQVGTV
Trigger: CACCGTACCCACCTGGGCCCAGTGGGCATGGGCAAC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACTTAGGCCCTGAGCCATaGCGGGAACAGTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHLGPEP*REQWVK
Trigger: CTTGACCCACTGTTCCCGCCATGGCTCAGGGCCTAA...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGAGTGGAGGGGGCTCTaGAACTCGGCCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKEWRGL*NSARPE
Trigger: CTCTGGCCTGGCCGAGTTCCAGAGCCCCCTCCACTC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368633.2
CDS-3UTR CCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAACTGCTCCAGCTGCTaGGCCAGAGCATGTGCATGC +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHNCSSC*ARACAC
Trigger: GCATGCACATGCTCTGGCCCAGCAGCTGGAGCAGTT...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR TCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGCTGCTGATGCCCAGGTaGGTCATGGTGTGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRLLMPR*VMVWVK
Trigger: TTTGACCCACACCATGACTCACCTGGGCATCAGCAG...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGGGGGACGCCCTGAGTaGTGGAAGACAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKGGRPE*WKTRWV
Trigger: CACCCACCTTGTCTTCCATCACTCAGGGCGTCCCCC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCTCCAGGGGGACGCCCTaGGTGATGGAAGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSSRGTP*VMEDKV
Trigger: CACCTTGTCTTCCATCACTCAGGGCGTCCCCCTGGA...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGCCAGATTCCCCAGGTTaGAGTCACTCATTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRPDSPG*SHSLAG
Trigger: ACCGGCCAATGAGTGACTTCAACCTGGGGAATCTGG...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR TCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGATGATGTTAGGCCCTaGGCCATGGCGGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTDDVRP*AMAGTV
Trigger: CACTGTTCCCGCCATGGCTCAGGGCCTAACATCATC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGCTGGGGCTGAGGACTaGTCAGGGAAGCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKAGAED*SGKPGG
Trigger: ACCTCCAGGCTTCCCTGAGCAGTCCTCAGCCCCAGC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCAGGCCCATCCCTTaGGCAGAATTCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKPRPIP*AEFRGH
Trigger: GTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGG...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGCTGGGGCTGAGGACTaGTCAGGGAAGCCTGACGCT +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKAGAED*SGKPDA
Trigger: AGCGTCAGGCTTCCCTGAGCAGTCCTCAGCCCCAGC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368630.7
CDS-3UTR GCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCCTTCGAGGATCTCGCTaGACCCGTTCCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSLRGSR*TRSTSP
Trigger: TGGGCTGGTGGAACGGGTGCAGCGAGATCCTCGAAG...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR GCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCAACTGCCCCTTCTCTaGAGGGAAATTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTQLPLL*REIAPG
Trigger: GCCTGGGGCAATTTCCCTGCAGAGAAGGGGCAGTTG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGGAGGACAGGCACATTaGCAGGCTGGTCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTGGQAH*QAGQEM
Trigger: CATCTCCTGACCAGCCTGCCAATGTGCCTGTCCTCC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGTGGTGGGCAGTACATaGCGGGCCAAGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKVVGST*RAKEEA
Trigger: TGCCTCCTCCTTGGCCCGCCATGTACTGCCCACCAC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGAAGTCGTGGTGGGCAGTACATaGCGGGCCAAGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLGQSMCMPGRERVKAEVVVGST*RAKEEA
Trigger: TGCCTCCTCCTTGGCCCGCCATGTACTGCCCACCAC...GACTTCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR CCA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACAAGGTGTGGGGATCCTaGGGGCCACCCATTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDKVWGS*GPPIGP
Trigger: GGGGCCAATGGGTGGCCCCCAGGATCCCCACACCTT...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGAAGTCTGGTGGTTGAAGGTGTaGGGATCCTGGGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: LLGQSMCMPGRERVKAEVWWLKV*GSWGPP
Trigger: GGGTGGCCCCCAGGATCCCCACACCTTCAACCACCA...GACTTCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCTTAGGCCCTGAGCCATaGCGGGAACAGTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTLGPEP*REQWVK
Trigger: CTTGACCCACTGTTCCCGCCATGGCTCAGGGCCTAA...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGGGCCTGTAACCGGGTaGAGCCGATGTCCATCATCA +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTGPVTG*SRCPSS
Trigger: TGATGATGGACATCGGCTCCACCCGGTTACAGGCCC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368633.2
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGCCAGTCGCAGTTTTTaGGCCTGTAACCGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTASRSF*ACNRVE
Trigger: CTCCACCCGGTTACAGGCCCAAAAACTGCGACTGGC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368633.2
CDS-3UTR TCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCTGCTGATGCCCAGGTaGGTCATGGTGTGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTLLMPR*VMVWVK
Trigger: TTTGACCCACACCATGACTCACCTGGGCATCAGCAG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACGGGGGACGCCCTGAGTaGTGGAAGACAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDGGRPE*WKTRWV
Trigger: CACCCACCTTGTCTTCCATCACTCAGGGCGTCCCCC...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAATCCAGGGGGACGCCCTaGGTGATGGAAGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKSRGTP*VMEDKV
Trigger: CACCTTGTCTTCCATCACTCAGGGCGTCCCCCTGGA...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAATGCACTGAACAAGACTaGGAGGGCAGCCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKCTEQD*EGSPGC
Trigger: GCAGCCAGGGCTGCCCTCTCAGTCTTGTTCAGTGCA...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCCAGATTCCCCAGGTTaGAGTCACTCATTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTPDSPG*SHSLAG
Trigger: ACCGGCCAATGAGTGACTTCAACCTGGGGAATCTGG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
CDS-3UTR TCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCGATGATGTTAGGCCCTaGGCCATGGCGGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSDDVRP*AMAGTV
Trigger: CACTGTTCCCGCCATGGCTCAGGGCCTAACATCATC...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGGTCACTGCGGAATaGCTCCTCCACAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKPVTAE*LLHSRI
Trigger: GATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGG...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACCTCTCCATGCTGAACTaGTCCAGATTCCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHLSMLN*SRFPRL
Trigger: CAACCTGGGGAATCTGGAGCAGTTCAGCATGGAGAG...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR GCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCGGCTCTCTCCTCCACTaGAAGGGGAAGAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSGSLLH*KGKSGE
Trigger: CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCC...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGCCCATGGTGCCGAGTaGTCCGAGATGAATCCAAAG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTAHGAE*SEMNPK
Trigger: CTTTGGATTCATCTCGGAGCACTCGGCACCATGGGC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCAGAGCTTGTCCCGGGTaGAGCCGATGTCCATCATCA +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTRACPG*SRCPSS
Trigger: TGATGATGGACATCGGCTCCACCCGGGACAAGCTCT...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR CCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCGGAGGACAGGCACATTaGCAGGCTGGTCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSGGQAH*QAGQEM
Trigger: CATCTCCTGACCAGCCTGCCAATGTGCCTGTCCTCC...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCCATGGCGGGAACAGTaGGTCAAGTTCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTPWREQ*VKFWWL
Trigger: CAACCACCAGAACTTGACCCACTGTTCCCGCCATGG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGGAAAGGAATGGTGGTaGGGGATGGGGCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTGKEWW*GMGPRR
Trigger: TCTTCTTGGCCCCATCCCCCACCACCATTCCTTTCC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGGAGAGCTGTCAATGTaGCGGGTGTATCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTGELSM*RVYRRS
Trigger: ACTTCGCCGATACACCCGCCACATTGACAGCTCTCC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCACTGCTGATGCCCAGGTaGGTCATGGTGTGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQALLMPR*VMVWVK
Trigger: TTTGACCCACACCATGACTCACCTGGGCATCAGCAG...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCTCTCCATGCTGAACTaGTCCAGATTCCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTLSMLN*SRFPRL
Trigger: CAACCTGGGGAATCTGGAGCAGTTCAGCATGGAGAG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
CDS-3UTR GCA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCATTGGAGCCGGTCACTaGGGAATGACTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSIGAGH*GMTPPQ
Trigger: CTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAAT...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACATCCGGAAAAGCCCTaGTTCCAGGGCTCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKHPEKP*FQGSPL
Trigger: TAGAGGGGAGCCCTGGAAGCAGGGCTTTTCCGGATG...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGGCTCTCTCCTCCACTaGAAGGGGAAGAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKGSLLH*KGKSGE
Trigger: CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACTGGGCCAGAGCATGTaGATGCCAGGAAGAGAACGG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKLGQSM*MPGRER
Trigger: CCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAG...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACTGAACTGCTCCAGCTaGTGGGCCAGAGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKLNCSS*WARACA
Trigger: TGCACATGCTCTGGCCCAGCAGCTGGAGCAGTTCAG...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGTATGGGGGTAACCGCTaGTCAGTGGACAGTTTACTG +
Preference number: 4 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRYGGNR*SVDSLL
Trigger: CAGTAAACTGTCCACTGACCAGCGGTTACCCCCATA...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCAGGCAGAACCAGACTTaGGGAGCTGTATGGGTATGG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTRQNQT*GAVWVW
Trigger: CCATACCCATACAGCTCCCCAAGTCTGGTTCTGCCT...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCACCATGGCGGGAACAGTaGGTCAAGTTCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQAPWREQ*VKFWWL
Trigger: CAACCACCAGAACTTGACCCACTGTTCCCGCCATGG...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGGAAAGGAATGGTGGTaGGGGATGGGGCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQAGKEWW*GMGPRR
Trigger: TCTTCTTGGCCCCATCCCCCACCACCATTCCTTTCC...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGCAAACTCAGGGGGCTaGGGGGCACACGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEANSGG*GAHGGG
Trigger: ACCACCGCCGTGTGCCCCTCAGCCCCCTGAGTTTGC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGGAAGACAAGGTGGGTaGCATTGTTGGCGAAAACTG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTGRQGG*HCWRKL
Trigger: CAGTTTTCGCCAACAATGTCACCCACCTTGTCTTCC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp CTGTATGGGTATGGGGGTAACCGCTGGTCAGTGGACAGTTTACTGGTATCCAGGGGGGGACGCCCTGAGTaGTGGAAGACAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LYGYGGNRWSVDSLLVSRGGRPE*WKTRWV
Trigger: CACCCACCTTGTCTTCCATCACTCAGGGCGTCCCCC...CCTGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAAGTGGTGGGGGAAAGTaGAGGTTGGTGAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKSGGGK*RLVRSG
Trigger: ACCTGACCTCACCAACCTGCACTTTCCCCCACCACT...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAATTGGAGCCGGTCACTaGGGAATGACTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKIGAGH*GMTPPQ
Trigger: CTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAAT...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGCCCATGGTGCCGAGTaGTCCGAGATGAATCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKAHGAE*SEMNPK
Trigger: CTTTGGATTCATCTCGGAGCACTCGGCACCATGGGC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGTGGAAGCCGAGGCCGTaGCCGAACCAGGCCCGTTCG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEWKPRP*PNQARS
Trigger: CGAACGGGCCTGGTTCGGCCACGGCCTCGGCTTCCA...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGGTGGCCCAGGGAGGTaGTGGGCAGTACATGGCGGG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEGGPGR*WAVHGG
Trigger: CCCGCCATGTACTGCCCACCACCTCCCTGGGCCACC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGCTGTTGGGACCTTCTaGCGTCGGCTGGGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEAVGTF*RRLGPR
Trigger: TCGCGGGCCCAGCCGACGCCAGAAGGTCCCAACAGC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGGAAAGGAATGGTGGTaGGGGATGGGGCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKGKEWW*GMGPRR
Trigger: TCTTCTTGGCCCCATCCCCCACCACCATTCCTTTCC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGGCTAGAAAGAGGATCTaGGGACAGAGAGTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRARKRI*GQRVES
Trigger: AGACTCTACTCTCTGTCCCCAGATCCTCTTTCTAGC...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGAATCCAAAGGTGAGTaGAGGGGGCTCTGGAACTCG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKESKGE*RGLWNS
Trigger: CGAGTTCCAGAGCCCCCTCCACTCACCTTTGGATTC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368633.2
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGGAGAGCTGTCAATGTaGCGGGTGTATCGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKGELSM*RVYRRS
Trigger: ACTTCGCCGATACACCCGCCACATTGACAGCTCTCC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGGCCCATGCCCCTGCTaGTGCCCAGGTGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEGPCPC*CPGESW
Trigger: CCATGACTCACCTGGGCATCAGCAGGGGCATGGGCC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGAAGTCCAAGATTCCCCAGGTTaGAGTCACTCATTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LLGQSMCMPGRERVKAEVQDSPG*SHSLAG
Trigger: ACCGGCCAATGAGTGACTTCAACCTGGGGAATCTTG...GACTTCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGTGCCTGCCTGGGGGCTaGCCACCTGAGGACTGCACT +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGECLPGG*PPEDCT
Trigger: AGTGCAGTCCTCAGGTGGGCAGCCCCCAGGCAGGCA...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACATTGGAGCCGGTCACTaGGGAATGACTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDIGAGH*GMTPPQ
Trigger: CTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAAT...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR GCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAAGTAGAGTCTCTACCTaGCAGGGGGAAGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKSRVST*QGEGRK
Trigger: TTTCCTCCCTTCCCCCTGGCAGGTAGAGACTCTACT...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGGCACATTGGCAGGCTaGTCAGGAGATGGAAAGATG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKGTLAG*SGDGKM
Trigger: CATCTTTCCATCTCCTGACCAGCCTGCCAATGTGCC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGAAGTCGGCACATTGGCAGGCTaGTCAGGAGATGGAAAGATG +
Preference number: 4 (lower is better)
Translates to: LLGQSMCMPGRERVKAEVGTLAG*SGDGKM
Trigger: CATCTTTCCATCTCCTGACCAGCCTGCCAATGTGCC...GACTTCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCCTTCTGGCGTCGGCTaGGCCCGCGAGCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEPSGVG*AREQTQ
Trigger: CTGAGTTTGCTCGCGGGCCCAGCCGACGCCAGAAGG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGTAACCGCTGGTCAGTaGACAGTTTACTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTVTAGQ*TVYWYP
Trigger: TGGATACCAGTAAACTGTCCACTGACCAGCGGTTAC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCATATGGGGGTAACCGCTaGTCAGTGGACAGTTTACTG +
Preference number: 4 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQAYGGNR*SVDSLL
Trigger: CAGTAAACTGTCCACTGACCAGCGGTTACCCCCATA...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAAGGCAGAACCAGACTTaGGGAGCTGTATGGGTATGG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKRQNQT*GAVWVW
Trigger: CCATACCCATACAGCTCCCCAAGTCTGGTTCTGCCT...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp CTGTATGGGTATGGGGGTAACCGCTGGTCAGTGGACAGTTTACTGGTATCCAGGCCCACTGGGCCCAGGTaGGTACGGTGTCCCATAATG +
Preference number: 4 (lower is better)
Translates to: LYGYGGNRWSVDSLLVSRPTGPR*VRCPIM
Trigger: CATTATGGGACACCGTACCCACCTGGGCCCAGTGGG...CCTGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGTTGAAGTCACTCATTaGCCGGTGGTAAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTVEVTH*PVVRLL
Trigger: CAACAGTCTTACCACCGGCCAATGAGTGACTTCAAC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGAAGGTGTGGGGATCCTaGGGGCCACCCATTGGCCCC +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEKVWGS*GPPIGP
Trigger: GGGGCCAATGGGTGGCCCCCAGGATCCCCACACCTT...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGCTAGAAAGAGGATCTaGGGACAGAGAGTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTARKRI*GQRVES
Trigger: AGACTCTACTCTCTGTCCCCAGATCCTCTTTCTAGC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACGGTGTATCGGCGAAGTaGGGACACCATTCTTCGAGG +
Preference number: 4 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDGVSAK*GHHSSR
Trigger: CCTCGAAGAATGGTGTCCCCACTTCGCCGATACACC...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR TCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGGAAGACAAGGTGGGTaGCATTGTTGGCGAAAACTG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKGRQGG*HCWRKL
Trigger: CAGTTTTCGCCAACAATGTCACCCACCTTGTCTTCC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp CTGTATGGGTATGGGGGTAACCGCTGGTCAGTGGACAGTTTACTGGTATCCAGGGATGATGTTAGGCCCTaGGCCATGGCGGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: LYGYGGNRWSVDSLLVSRDDVRP*AMAGTV
Trigger: CACTGTTCCCGCCATGGCTCAGGGCCTAACATCATC...CCTGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCCCAGGCCCATCCCTTaGGCAGAATTCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEPRPIP*AEFRGH
Trigger: GTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGTGGTGGGCAGTACATaGCGGGCCAAGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEVVGST*RAKEEA
Trigger: TGCCTCCTCCTTGGCCCGCCATGTACTGCCCACCAC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAATATGGGGGTAACCGCTaGTCAGTGGACAGTTTACTG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKYGGNR*SVDSLL
Trigger: CAGTAAACTGTCCACTGACCAGCGGTTACCCCCATA...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGTGGTGGTTGAAGGTGTaGGGATCCTGGGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEWWLKV*GSWGPP
Trigger: GGGTGGCCCCCAGGATCCCCACACCTTCAACCACCA...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGTCCAGGGGGACGCCCTaGGTGATGGAAGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGESRGTP*VMEDKV
Trigger: CACCTTGTCTTCCATCACTCAGGGCGTCCCCCTGGA...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGTGCACTGAACAAGACTaGGAGGGCAGCCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGECTEQD*EGSPGC
Trigger: GCAGCCAGGGCTGCCCTCTCAGTCTTGTTCAGTGCA...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGTAACCGCTGGTCAGTaGACAGTTTACTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKVTAGQ*TVYWYP
Trigger: TGGATACCAGTAAACTGTCCACTGACCAGCGGTTAC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCCCACTGGGCCCAGGTaGGTACGGTGTCCCATAATG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEPTGPR*VRCPIM
Trigger: CATTATGGGACACCGTACCCACCTGGGCCCAGTGGG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGTTGAAGTCACTCATTaGCCGGTGGTAAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKVEVTH*PVVRLL
Trigger: CAACAGTCTTACCACCGGCCAATGAGTGACTTCAAC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGAAGTCGTTGAAGTCACTCATTaGCCGGTGGTAAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: LLGQSMCMPGRERVKAEVVEVTH*PVVRLL
Trigger: CAACAGTCTTACCACCGGCCAATGAGTGACTTCAAC...GACTTCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGGGATGGTGATGAGGTaGCCTCATTGGAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEGMVMR*PHWSRS
Trigger: TGACCGGCTCCAATGAGGGCACCTCATCACCATCCC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCATCCGGAAAAGCCCTaGTTCCAGGGCTCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEHPEKP*FQGSPL
Trigger: TAGAGGGGAGCCCTGGAAGCAGGGCTTTTCCGGATG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGGCTCTCTCCTCCACTaGAAGGGGAAGAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEGSLLH*KGKSGE
Trigger: CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCTCTCCATGCTGAACTaGTCCAGCTGCTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGELSMLN*SSCWAR
Trigger: TCTGGCCCAGCAGCTGGAGCAGTTCAGCATGGAGAG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGGAGGACAGGCACATTaGCAGGCTGGTCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEGGQAH*QAGQEM
Trigger: CATCTCCTGACCAGCCTGCCAATGTGCCTGTCCTCC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACGTTGAAGTCACTCATTaGCCGGTGGTAAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDVEVTH*PVVRLL
Trigger: CAACAGTCTTACCACCGGCCAATGAGTGACTTCAAC...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR TCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCCAGATTCCCCAGGTTaGAGTCACTCATTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEPDSPG*SHSLAG
Trigger: ACCGGCCAATGAGTGACTTCAACCTGGGGAATCTGG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGAGTGGTGGGGGAAAGTaGAGGTTGGTGAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGESGGGK*RLVRSG
Trigger: ACCTGACCTCACCAACCTGCACTTTCCCCCACCACT...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGATTGGAGCCGGTCACTaGGGAATGACTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEIGAGH*GMTPPQ
Trigger: CTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAAT...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCCATGGCGGGAACAGTaGGTCAAGTTCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEPWREQ*VKFWWL
Trigger: CAACCACCAGAACTTGACCCACTGTTCCCGCCATGG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGGAAAGGAATGGTGGTaGGGGATGGGGCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEGKEWW*GMGPRR
Trigger: TCTTCTTGGCCCCATCCCCCACCACCATTCCTTTCC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGGTGTATCGGCGAAGTaGGGACACCATTCTTCGAGG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEGVSAK*GHHSSR
Trigger: CCTCGAAGAATGGTGTCCCCACTTCGCCGATACACC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAGAAAGAGAAAGACTTTaGGGTCCATTTCACCATCCA +
Preference number: 4 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKERERL*GPFHHP
Trigger: TGGATGGTGAAATGGACCCCAAAGTCTTTCTCTTTC...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCTCTCCATGCTGAACTaGTCCAGATTCCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGELSMLN*SRFPRL
Trigger: CAACCTGGGGAATCTGGAGCAGTTCAGCATGGAGAG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
CDS-3UTR GCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGAGTAGAGTCTCTACCTaGCAGGGGGAAGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGESRVST*QGEGRK
Trigger: TTTCCTCCCTTCCCCCTGGCAGGTAGAGACTCTACT...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGGCACATTGGCAGGCTaGTCAGGAGATGGAAAGATG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEGTLAG*SGDGKM
Trigger: CATCTTTCCATCTCCTGACCAGCCTGCCAATGTGCC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp CTGTATGGGTATGGGGGTAACCGCTGGTCAGTGGACAGTTTACTGGTATCCAGGGTAACCGCTGGTCAGTaGACAGTTTACTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: LYGYGGNRWSVDSLLVSRVTAGQ*TVYWYP
Trigger: TGGATACCAGTAAACTGTCCACTGACCAGCGGTTAC...CCTGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGAGGCAGAACCAGACTTaGGGAGCTGTATGGGTATGG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGERQNQT*GAVWVW
Trigger: CCATACCCATACAGCTCCCCAAGTCTGGTTCTGCCT...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR TCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGGAAGACAAGGTGGGTaGCATTGTTGGCGAAAACTG +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEGRQGG*HCWRKL
Trigger: CAGTTTTCGCCAACAATGTCACCCACCTTGTCTTCC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGAGGCCAGAGCCAATCTaGTTAACATTGGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGERPEPI*LTLGRD
Trigger: GTCTCTGCCCAATGTTAACCAGATTGGCTCTGGCCT...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368633.2
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGTAACCGCTGGTCAGTaGACAGTTTACTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEVTAGQ*TVYWYP
Trigger: TGGATACCAGTAAACTGTCCACTGACCAGCGGTTAC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CCA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGCTAGAAAGAGGATCTaGGGACAGAGAGTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEARKRI*GQRVES
Trigger: AGACTCTACTCTCTGTCCCCAGATCCTCTTTCTAGC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CAA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACGGGCAGAGTCAGAGCTaGTCCCGGGTGGAGCCGATG +
Preference number: 5 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHGQSQS*SRVEPM
Trigger: CATCGGCTCCACCCGGGACAAGCTCTGACTCTGCCC...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR CAA 90 bp GCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACAGGGCTTTAGGCCCTCCCTaGAGTTCCCCCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: AGHCGMTPPQQDQAAGHRALGPP*SSPRPI
Trigger: GATGGGCCTGGGGGAACTCAAGGGAGGGCCTAAAGC...CCTGTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CAA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACCTAAATTTGCGCGGATaGGAAGCCGAGGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHLNLRG*EAEAVA
Trigger: GGCCACGGCCTCGGCTTCCAATCCGCGCAAATTTAG...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR CAA 90 bp CCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCCCGGTGGTAAGACTGTaGCCCATGCCCACTGGGCCC +
Preference number: 5 (lower is better)
Translates to: PHWSRSLRNDSSTAGSGSPVVRL*PMPTGP
Trigger: GGGCCCAGTGGGCATGGGCAACAGTCTTACCACCGG...GCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CAA 90 bp GGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCAGGGCACGATGAGGTGCCCTCATaGGAGCCGGTCACTGCGGAA +
Preference number: 5 (lower is better)
Translates to: GAGHCGMTPPQQDQAAGHDEVPS*EPVTAE
Trigger: TTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATC...GTGCCCTGCTGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CAA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCACCCCAGGCCCATCCCTaGCGCAGAATTCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQAPQAHP*RRIQGP
Trigger: TGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGG...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CAA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGCTTTAGGCCCTCCCTaGAGTTCCCCCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTALGPP*SSPRPI
Trigger: GATGGGCCTGGGGGAACTCAAGGGAGGGCCTAAAGC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS CCA 90 bp TACCTCCCCTTCATCCCTCCAGTCAGGCAGCACCCAGTGGGCACATaGCCAGGACAGTCACTCACCTGGTGCATCATAGCCTGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: YLPFIPPVRQHPVGT*PGQSLTWCIIAWAQ
Trigger: CTGGGCCCAGGCTATGATGCACCAGGTGAGTGACTGTCCTGGCCATGTGCCCACTGGGTGCTGCCTGACTGGAGGGATGAAGGGGAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524997.1
CDS-3UTR CAA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCTAAATTTGCGCGGATaGGAAGCCGAGGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTLNLRG*EAEAVA
Trigger: GGCCACGGCCTCGGCTTCCAATCCGCGCAAATTTAG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
CDS-3UTR CAA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGGTGGTAAGACTGTaGCCCATGCCCACTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKPVVRL*PMPTGP
Trigger: GGGCCCAGTGGGCATGGGCAACAGTCTTACCACCGG...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CAA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCGATGAGGTGCCCTCATaGGAGCCGGTCACTGCGGAA +
Preference number: 5 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTDEVPS*EPVTAE
Trigger: TTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATC...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CAA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCCAGGCCCATCCCTaGCGCAGAATTCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKPQAHP*RRIQGP
Trigger: TGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGG...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CAA 90 bp GCCCTCATTGGAGCCGGTCACTGCGGAATGACTCCTCCACAGCAGGATCAGGCAGCTTTAGGCCCTCCCTaGAGTTCCCCCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: ALIGAGHCGMTPPQQDQAALGPP*SSPRPI
Trigger: GATGGGCCTGGGGGAACTCAAGGGAGGGCCTAAAGC...TGCCTGATCCTGCTGTGGAGGAGTCATTCCGCAGTGACCGGCTCCAATGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CAA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACCCCCAGGCCCATCCCTaGCGCAGAATTCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDPQAHP*RRIQGP
Trigger: TGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGG...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000461638.6
CDS-3UTR CAA 90 bp CTGTATGGGTATGGGGGTAACCGCTGGTCAGTGGACAGTTTACTGGTATCCAGGCCGGTGGTAAGACTGTaGCCCATGCCCACTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LYGYGGNRWSVDSLLVSRPVVRL*PMPTGP
Trigger: GGGCCCAGTGGGCATGGGCAACAGTCTTACCACCGG...CCTGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS CCA 90 bp ACAGAAGTCAGCAGAGGAAGCAGCCTAAGAAACTCCACTCCTCCCTaGCTGGGGTCTACTCACCTGGAACTCGGCCAGGCCAGAGCCAAT +
Preference number: 5 (lower is better)
Translates to: TEVSRGSSLRNSTPP*LGSTHLELGQARAN
Trigger: ATTGGCTCTGGCCTGGCCGAGTTCCAGGTGAGTAGACCCCAGCCAGGGAGGAGTGGAGTTTCTTAGGCTGCTTCCTCTGCTGACTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487235.5
CDS GCA 90 bp GCCAGTAAGGCAGGACAGGAAGCAGAAGCAGGTGGGAAGGAGTCCTaGTCCCTGAACCTGCACACAATCCCAACACCAGCCCAGAAATTC +
Preference number: 5 (lower is better)
Translates to: ASKAGQEAEAGGKES*SLNLHTIPTPAQKF
Trigger: GAATTTCTGGGCTGGTGTTGGGATTGTGTGCAGGTTCAGGGAGCAGGACTCCTTCCCACCTGCTTCTGCTTCCTGTCCTGCCTTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS GCA 90 bp CTTTCTAGGAAACACCACACCTACCAGTTATCACTGGCTGAGAACTaGCGTGAGGGAATCCTGGGGTGCAGAGGTGACAGGCGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LSRKHHTYQLSLAEN*REGILGCRGDRRCG
Trigger: CCCACACCGCCTGTCACCTCTGCACCCCAGGATTCCCTCACGGCAGTTCTCAGCCAGTGATAACTGGTAGGTGTGGTGTTTCCTAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524997.1
CDS CCA 90 bp ACCAGCCCATGGTGCCGAGTGCTCCGAGATGAATCCAAAGGTGAGTaGAGGGGGCTCTGCCAAAAAGGACAGAAGTCAGCAGAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: TSPWCRVLRDESKGE*RGLCQKGQKSAEEA
Trigger: TGCTTCCTCTGCTGACTTCTGTCCTTTTTGGCAGAGCCCCCTCCACTCACCTTTGGATTCATCTCGGAGCACTCGGCACCATGGGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487235.5
CDS-3UTR CAA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCCGGTGGTAAGACTGTaGCCCATGCCCACTGGGCCC +
Preference number: 5 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEPVVRL*PMPTGP
Trigger: GGGCCCAGTGGGCATGGGCAACAGTCTTACCACCGG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CAA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGCCCCAGGCCCATCCCTaGCGCAGAATTCAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEPQAHP*RRIQGP
Trigger: TGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGG...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CAA 90 bp GAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAACCCATAATGAGAGCTCCTaGTGTATGCCAGTCGCAGTT +
Preference number: 5 (lower is better)
Translates to: EFPQAHPLRRIQGPPGQTHNESS*CMPVAV
Trigger: AACTGCGACTGGCATACACAAGGAGCTCTCATTATG...GGTTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368633.2
CDS TCA 90 bp AGGCAGGACAGGAAGCAGAAGCAGGTGGGAAGGAGTCCTGCTCCCTaGACCTGCACACAATCCCAACACCAGCCCAGAAATTCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: RQDRKQKQVGRSPAP*TCTQSQHQPRNSLA
Trigger: TGCCAAAGAATTTCTGGGCTGGTGTTGGGATTGTGTGCAGGTTCAGGGAGCAGGACTCCTTCCCACCTGCTTCTGCTTCCTGTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS-3UTR CAA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGGCTTTAGGCCCTCCCTaGAGTTCCCCCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEALGPP*SSPRPI
Trigger: GATGGGCCTGGGGGAACTCAAGGGAGGGCCTAAAGC...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
ENST00000461638.6
CDS-3UTR CAA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAAATCTTCTCACTAAATTaGCGCGGATTGGAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKIFSLN*RGLEAE
Trigger: CTCGGCTTCCAATCCGCGCAAATTTAGTGAGAAGAT...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
CDS-3UTR CAA 90 bp TTGAGTTCCCCCAGGCCCATCCCTTGCGCAGAATTCAGGGGCCACCTGGACAAATCAATAGCAGGTACTTaGGGGTCCATTTCACCATCC +
Preference number: 5 (lower is better)
Translates to: LSSPRPIPCAEFRGHLDKSIAGT*GSISPS
Trigger: GGATGGTGAAATGGACCCCAAAGTACCTGCTATTGA...TTTGTCCAGGTGGCCCCTGAATTCTGCGCAAGGGATGGGCCTGGGGGAACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000368633.2
CDS GCA 90 bp AGAATACCTGCAAGGGATACAGTGGCATTGGCTGCAGTGCTCACTTaGCTACCTGCTTTAAATAGCTCCATGGAGGCCGGGTATGGTGGC +
Preference number: 5 (lower is better)
Translates to: RIPARDTVALAAVLT*LPALNSSMEAGYGG
Trigger: GCCACCATACCCGGCCTCCATGGAGCTATTTAAAGCAGGTAGGCAAGTGAGCACTGCAGCCAATGCCACTGTATCCCTTGCAGGTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS CCA 90 bp CCCTTCCTCTTCTTTCTAGGAAACACCACACCTACCAGTTATCACTaGCTGAGAACTGCCGTGAGGGAATCCTGGGGTGCAGAGGTGACA +
Preference number: 5 (lower is better)
Translates to: PFLFFLGNTTPTSYH*LRTAVRESWGAEVT
Trigger: TGTCACCTCTGCACCCCAGGATTCCCTCACGGCAGTTCTCAGCCAGTGATAACTGGTAGGTGTGGTGTTTCCTAGAAAGAAGAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524997.1
CDS CCA 90 bp CTCCCTGAACCTGCACACAATCCCAACACCAGCCCAGAAATTCTTTaGCATTCAGTACCCACAGCAGTGAGGAACACATACCTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: LPEPAHNPNTSPEIL*HSVPTAVRNTYLWG
Trigger: ACCCCAAAGGTATGTGTTCCTCACTGCTGTGGGTACTGAATGCCAAAGAATTTCTGGGCTGGTGTTGGGATTGTGTGCAGGTTCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS-3UTR CAA 90 bp CTGTATGGGTATGGGGGTAACCGCTGGTCAGTGGACAGTTTACTGGTATCCAGGATCTTCTCACTAAATTaGCGCGGATTGGAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: LYGYGGNRWSVDSLLVSRIFSLN*RGLEAE
Trigger: CTCGGCTTCCAATCCGCGCAAATTTAGTGAGAAGAT...CCTGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCCCCATACCCATACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303569.10
CDS-3UTR CAA 90 bp AGAAGAGGGATGGTGATGAGGTGCCCTCATTGGAGCCGGTCACTGCGGAATGACCTCAATAGCAGGTACTaGAAAGAGAAAGACTTTGGG +
Preference number: 5 (lower is better)
Translates to: RRGMVMRCPHWSRSLRNDLNSRY*KEKDFG
Trigger: CCCAAAGTCTTTCTCTTTCAAGTACCTGCTATTGAG...GTCATTCCGCAGTGACCGGCTCCAATGAGGGCACCTCATCACCATCCCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461638.6
CDS TCA 90 bp CCAACACCAGCCCAGAAATTCTTTGGCATTCAGTACCCACAGCAGTaGGGAACACATACCTTTGGGGTCCATTTCACCATCCAGAATACC +
Preference number: 5 (lower is better)
Translates to: PTPAQKFFGIQYPQQ*GTHTFGVHFTIQNT
Trigger: GGTATTCTGGATGGTGAAATGGACCCCAAAGGTATGTGTTCCTCACTGCTGTGGGTACTGAATGCCAAAGAATTTCTGGGCTGGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS-3UTR CAA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGATCTTCTCACTAAATTaGCGCGGATTGGAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGEIFSLN*RGLEAE
Trigger: CTCGGCTTCCAATCCGCGCAAATTTAGTGAGAAGAT...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303569.10
ENST00000368630.7
ENST00000368633.2
CDS-3UTR CAA 90 bp AAAAATAGTATCCACTCTGGCTCTCTCCTCCACTGCAAGGGGAAGAGTGGTGAGTCAATAGCAGGTACTTaGGGGTCCATTTCACCATCC +
Preference number: 5 (lower is better)
Translates to: KNSIHSGSLLHCKGKSGESIAGT*GSISPS
Trigger: GGATGGTGAAATGGACCCCAAAGTACCTGCTATTGA...CTCACCACTCTTCCCCTTGCAGTGGAGGAGAGAGCCAGAGTGGATACTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303569.10
ENST00000368633.2
CDS CCA 90 bp ATTCTTTGGCATTCAGTACCCACAGCAGTGAGGAACACATACCTTTaGGGTCCATTTCACCATCCAGAATACCTGCAAGGGATACAGTGG +
Preference number: 5 (lower is better)
Translates to: ILWHSVPTAVRNTYL*GPFHHPEYLQGIQW
Trigger: CCACTGTATCCCTTGCAGGTATTCTGGATGGTGAAATGGACCCCAAAGGTATGTGTTCCTCACTGCTGTGGGTACTGAATGCCAAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS CCA 72 bp CTGGTATCCAGGGGGACGCCCTGGTGCATCATAGCCTaGGCCCAGGCCCATGCCCCTGCTGATGCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: LVSRGTPWCIIA*AQAHAPADAQV
Trigger: CACCTGGGCATCAGCAGGGGCATGGGCCTGGGCCCAGGCTATGATGCACCAGGGCGTCCCCCTGGATACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487235.5
CDS CCA 72 bp GGGAGAGCTGTCAATGTGGCGGGTGTATCGGCGAAGTaGGGACACCATTCTTCGAGGATCTCGCTGCACCCG +
Preference number: 6 (lower is better)
Translates to: GRAVNVAGVSAK*GHHSSRISLHP
Trigger: CGGGTGCAGCGAGATCCTCGAAGAATGGTGTCCCCACTTCGCCGATACACCCGCCACATTGACAGCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368633.2
ENST00000461638.6
ENST00000476883.5
ENST00000487235.5
ENST00000492073.1
CDS CCA 72 bp AGCAGAGGAAGCAGCCTAAGAAACTCCACTCCTCCCTaGCTGGGGTCTACTCACCTGGAACTCGGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: SRGSSLRNSTPP*LGSTHLELGQA
Trigger: GGCCTGGCCGAGTTCCAGGTGAGTAGACCCCAGCCAGGGAGGAGTGGAGTTTCTTAGGCTGCTTCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487235.5
CDS CCA 72 bp TTCATCCCTCCAGTCAGGCAGCACCCAGTGGGCACATaGCCAGGACAGTCACTCACCTGGTGCATCATAGCC +
Preference number: 6 (lower is better)
Translates to: FIPPVRQHPVGT*PGQSLTWCIIA
Trigger: GGCTATGATGCACCAGGTGAGTGACTGTCCTGGCCATGTGCCCACTGGGTGCTGCCTGACTGGAGGGATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524997.1
CDS CCA 72 bp GAAACTCCACTCCTCCCTGGCTGGGGTCTACTCACCTaGAACTCGGCCAGGCCAGAGCCAATCTGGTTAACA +
Preference number: 6 (lower is better)
Translates to: ETPLLPGWGLLT*NSARPEPIWLT
Trigger: TGTTAACCAGATTGGCTCTGGCCTGGCCGAGTTCCAGGTGAGTAGACCCCAGCCAGGGAGGAGTGGAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487235.5
CDS GCA 72 bp GCAAGGGATACAGTGGCATTGGCTGCAGTGCTCACTTaGCTACCTGCTTTAAATAGCTCCATGGAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: ARDTVALAAVLT*LPALNSSMEAG
Trigger: CCCGGCCTCCATGGAGCTATTTAAAGCAGGTAGGCAAGTGAGCACTGCAGCCAATGCCACTGTATCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS GCA 72 bp AAACACCACACCTACCAGTTATCACTGGCTGAGAACTaGCGTGAGGGAATCCTGGGGTGCAGAGGTGACAGG +
Preference number: 6 (lower is better)
Translates to: KHHTYQLSLAEN*REGILGCRGDR
Trigger: CCTGTCACCTCTGCACCCCAGGATTCCCTCACGGCAGTTCTCAGCCAGTGATAACTGGTAGGTGTGGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524997.1
CDS CCA 72 bp TGGTGCCGAGTGCTCCGAGATGAATCCAAAGGTGAGTaGAGGGGGCTCTGCCAAAAAGGACAGAAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: WCRVLRDESKGE*RGLCQKGQKSA
Trigger: TGCTGACTTCTGTCCTTTTTGGCAGAGCCCCCTCCACTCACCTTTGGATTCATCTCGGAGCACTCGGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487235.5
CDS TCA 72 bp CCTTTCCACCCAGAATGGGTGGCAGTGACCAGACTATaGAAGCGGCAACACAACGTCCTCCCTACTCTATCC +
Preference number: 6 (lower is better)
Translates to: PFHPEWVAVTRL*KRQHNVLPTLS
Trigger: GGATAGAGTAGGGAGGACGTTGTGTTGCCGCTTTCATAGTCTGGTCACTGCCACCCATTCTGGGTGGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524997.1
CDS GCA 72 bp CATACCTTTGGGGTCCATTTCACCATCCAGAATACCTaGAAGGGATACAGTGGCATTGGCTGCAGTGCTCAC +
Preference number: 6 (lower is better)
Translates to: HTFGVHFTIQNT*KGYSGIGCSAH
Trigger: GTGAGCACTGCAGCCAATGCCACTGTATCCCTTGCAGGTATTCTGGATGGTGAAATGGACCCCAAAGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS CCA 72 bp TTCTTTCTAGGAAACACCACACCTACCAGTTATCACTaGCTGAGAACTGCCGTGAGGGAATCCTGGGGTGCA +
Preference number: 6 (lower is better)
Translates to: FFLGNTTPTSYH*LRTAVRESWGA
Trigger: TGCACCCCAGGATTCCCTCACGGCAGTTCTCAGCCAGTGATAACTGGTAGGTGTGGTGTTTCCTAGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524997.1
CDS CAA 90 bp GGGTCCATTTCACCATCCAGAATACCTGCAAGGGATACAGTGGCATaGGCTGCAGTGCTCACTTGCCTACCTGCTTTAAATAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: GSISPSRIPARDTVA*AAVLTCLPALNSSM
Trigger: CATGGAGCTATTTAAAGCAGGTAGGCAAGTGAGCACTGCAGCCAATGCCACTGTATCCCTTGCAGGTATTCTGGATGGTGAAATGGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS CCA 72 bp CATTCAGTACCCACAGCAGTGAGGAACACATACCTTTaGGGTCCATTTCACCATCCAGAATACCTGCAAGGG +
Preference number: 6 (lower is better)
Translates to: HSVPTAVRNTYL*GPFHHPEYLQG
Trigger: CCCTTGCAGGTATTCTGGATGGTGAAATGGACCCCAAAGGTATGTGTTCCTCACTGCTGTGGGTACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS CCA 72 bp CCTGCACACAATCCCAACACCAGCCCAGAAATTCTTTaGCATTCAGTACCCACAGCAGTGAGGAACACATAC +
Preference number: 6 (lower is better)
Translates to: PAHNPNTSPEIL*HSVPTAVRNTY
Trigger: GTATGTGTTCCTCACTGCTGTGGGTACTGAATGCCAAAGAATTTCTGGGCTGGTGTTGGGATTGTGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS CAA 72 bp GCATTCAGTACCCACAGCAGTGAGGAACACATACCTTaGGGGTCCATTTCACCATCCAGAATACCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: AFSTHSSEEHIP*GSISPSRIPAR
Trigger: CCTTGCAGGTATTCTGGATGGTGAAATGGACCCCAAAGGTATGTGTTCCTCACTGCTGTGGGTACTGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467860.1
CDS CAA 90 bp AATTCTTTGGCATTCAGTACCCACAGCAGTGAGGAACACATACCTTaGGGGTCCATTTCACCATCCAGAATACCTGCAAGGGATACAGTG +
Preference number: 6 (lower is better)
Translates to: NSLAFSTHSSEEHIP*GSISPSRIPARDTV
Trigger: CACTGTATCCCTTGCAGGTATTCTGGATGGTGAAATGGACCCCAAAGGTATGTGTTCCTCACTGCTGTGGGTACTGAATGCCAAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467860.1