RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRTC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105662

Ensembl transcript IDs: ENST00000321949.13, ENST00000338797.10, ENST00000594658.5, ENST00000601916.1

Found 670 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGTTCGACCCCTCACGGGGCCTTCCGGTCACTTCCCGGCAAAGGTaGCCACCGATGGGCCTGCCTGCGGTGAGGCAGGGCTTCGAGGGG +
Preference number: 1 (lower is better)
Translates to: AFDPSRGLPVTSRQR*PPMGLPAVRQGFEG
Trigger: CCCCTCGAAGCCCTGCCTCACCGCAGGCAGGCCCATCGGTGGCCACCTTTGCCGGGAAGTGACCGGAAGGCCCCGTGAGGGGTCGAACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 90 bp GTGATACAGACCCCCTGGGAGGCCCGCCCAGGTCCAGGAGGGGCGTaGATCCTTCTGGAACACAGGGACGCCTGGCTGCTGGCTCCTGGC +
Preference number: 1 (lower is better)
Translates to: VIQTPWEARPGPGGA*ILLEHRDAWLLAPG
Trigger: GCCAGGAGCCAGCAGCCAGGCGTCCCTGTGTTCCAGAAGGATTCACGCCCCTCCTGGACCTGGGCGGGCCTCCCAGGGGGTCTGTATCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 90 bp AGGGCACCACATGTGGGTGACGGGCCAGGCCCAGGGGCACATCTGTaGCATCGGCTTTGTGGCCCTTGCTCTGAGAGCCCCTGCGTCCCA +
Preference number: 1 (lower is better)
Translates to: RAPHVGDGPGPGAHL*HRLCGPCSESPCVP
Trigger: TGGGACGCAGGGGCTCTCAGAGCAAGGGCCACAAAGCCGATGGCACAGATGTGCCCCTGGGCCTGGCCCGTCACCCACATGTGGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp CAAAGGATGCAAAGGTACAAAGACAAAAGCAGCCCTGCCAGAGGATaGGGCAGGGACGGCCGAGTGTGCCCTGAGCCGCCTGCCCCCGCC +
Preference number: 1 (lower is better)
Translates to: QRMQRYKDKSSPARG*GRDGRVCPEPPAPA
Trigger: GGCGGGGGCAGGCGGCTCAGGGCACACTCGGCCGTCCCTGCCCCATCCTCTGGCAGGGCTGCTTTTGTCTTTGTACCTTTGCATCCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 90 bp ACACACTGCTGTGTGTCTCCAAGTCCACCTGCCACGACCCTGAGCTaGCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGG +
Preference number: 1 (lower is better)
Translates to: THCCVSPSPPATTLS*QEGAASRPRCPREG
Trigger: CCCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGGAGACACACAGCAGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp TCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCCCCACACTCTTaGGGCAGAGAGGTCTCAGCTGCCACTGGTCATGGCATCTTCACA +
Preference number: 1 (lower is better)
Translates to: SSSRGPSLPASPPHS*GREVSAATGHGIFT
Trigger: TGTGAAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp CGAAACAGGAAGGTGGGGACGCCATGCTCTCAGGAGGGAGAGCCCTaGCTGAACTTCGCCGTAGGGGACCGATGTACCCAGCAGAGGGTC +
Preference number: 1 (lower is better)
Translates to: RNRKVGTPCSQEGEP*LNFAVGDRCTQQRV
Trigger: GACCCTCTGCTGGGTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCATGGCGTCCCCACCTTCCTGTTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 90 bp GCCTCTGAGACGGCTCCATCGGGACCCAGTGAAGGTGATGGGAGCTaGTGTTTTCAGGGCGAGGTGACAGAGGACCCCCGAATACCGCTG +
Preference number: 1 (lower is better)
Translates to: ASETAPSGPSEGDGS*CFQGEVTEDPRIPL
Trigger: CAGCGGTATTCGGGGGTCCTCTGTCACCTCGCCCTGAAAACAGCAGCTCCCATCACCTTCACTGGGTCCCGATGGAGCCGTCTCAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 90 bp TGGGGAGAGCAGCCTCTAACCCAGTGTAGACCAAGCATCCGGGCCTaGCCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTC +
Preference number: 1 (lower is better)
Translates to: WGEQPLTQCRPSIRA*PRTQTAGLCTRRNL
Trigger: GAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGTCAGGCCCGGATGCTTGGTCTACACTGGGTTAGAGGCTGCTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 90 bp AAGGCCAAGGGCCGCAGGGAACAGGACACTTGGCTCAGGTGGAGCTaGCGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGA +
Preference number: 1 (lower is better)
Translates to: KAKGRREQDTWLRWS*RENVPGTPKSHAAR
Trigger: TCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCCTGCGGCCCTTGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp TGTACCCAGCAGAGGGTCTGCAGAAGCCATGAGCACATGGGTGCGTaGGGAGAGCAGCCTCTAACCCAGTGTAGACCAAGCATCCGGGCC +
Preference number: 1 (lower is better)
Translates to: CTQQRVCRSHEHMGA*GEQPLTQCRPSIRA
Trigger: GGCCCGGATGCTTGGTCTACACTGGGTTAGAGGCTGCTCTCCCCACGCACCCATGTGCTCATGGCTTCTGCAGACCCTCTGCTGGGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp AGGCTGAACTTGGGCTACACCCTCTGCCTGCAAGACTTGCCACCCTaGGTAGTGACGTCGGCGAAACAGGAAGGTGGGGACGCCATGCTC +
Preference number: 1 (lower is better)
Translates to: RLNLGYTLCLQDLPP*VVTSAKQEGGDAML
Trigger: GAGCATGGCGTCCCCACCTTCCTGTTTCGCCGACGTCACTACCCAGGGTGGCAAGTCTTGCAGGCAGAGGGTGTAGCCCAAGTTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp AGACGGCAGCAGGAGCAACGTGACCAGGGAGCCTTCTCCTATGAGTaGCCACTTGGCTGCTCAGACACATGCCAAAGGCATTGCCGGGCA +
Preference number: 1 (lower is better)
Translates to: RRQQEQRDQGAFSYE*PLGCSDTCQRHCRA
Trigger: TGCCCGGCAATGCCTTTGGCATGTGTCTGAGCAGCCAAGTGGCCACTCATAGGAGAAGGCTCCCTGGTCACGTTGCTCCTGCTGCCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp CTTCAGGATGCTGAAAATGGGCCACGGGCCTGGGATGCTCCGAGGTaGGCATCCCTCCTCTCCTATCTGTCCACACCGAAGACCAGAGGA +
Preference number: 1 (lower is better)
Translates to: LQDAENGPRAWDAPR*ASLLSYLSTPKTRG
Trigger: TCCTCTGGTCTTCGGTGTGGACAGATAGGAGAGGAGGGATGCCCACCTCGGAGCATCCCAGGCCCGTGGCCCATTTTCAGCATCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 90 bp GCTCCCTGCCAGTCCCCCACACTCTTGGGGCAGAGAGGTCTCAGCTaGCACTGGTCATGGCATCTTCACACACACACTCTAAGGACTAGC +
Preference number: 1 (lower is better)
Translates to: APCQSPTLLGQRGLS*HWSWHLHTHTLRTS
Trigger: GCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACTGGCAGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 90 bp AACCTGCCACTAAAACACACACTGCTGTGTGTCTCCAAGTCCACCTaGCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACG +
Preference number: 1 (lower is better)
Translates to: NLPLKHTLLCVSKST*HDPELPRRGSQQTT
Trigger: CGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGGAGACACACAGCAGTGTGTGTTTTAGTGGCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp TACAACTTACTCCACCTCCTGCTCCCAGGGGGAGAATGGTGTCTGTaGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTAT +
Preference number: 1 (lower is better)
Translates to: YNLLHLLLPGGEWCL*PVGVGGHLCHTEEY
Trigger: ATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACCATTCTCCCCCTGGGAGCAGGAGGTGGAGTAAGTTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp TCCCCCACACTCTTGGGGCAGAGAGGTCTCAGCTGCCACTGGTCATaGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGG +
Preference number: 1 (lower is better)
Translates to: SPTLLGQRGLSCHWS*HLHTHTLRTSRHLW
Trigger: CCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp TGCCAGTCCCCCACACTCTTGGGGCAGAGAGGTCTCAGCTGCCACTaGTCATGGCATCTTCACACACACACTCTAAGGACTAGCAGGCAC +
Preference number: 1 (lower is better)
Translates to: CQSPTLLGQRGLSCH*SWHLHTHTLRTSRH
Trigger: GTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp GAGGACCCCCGAATACCGCTGGACCTTACTCCACCAGCCTCTCCCTaGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGT +
Preference number: 1 (lower is better)
Translates to: EDPRIPLDLTPPASP*SEGSLEIQKTQEAG
Trigger: ACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCTGGTGGAGTAAGGTCCAGCGGTATTCGGGGGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 90 bp AACAGCAGTTCCTATTCCAAGAACAGCAGAAAACAAAGCCAGCCCTaGTGCCTCCCTTGCAGGGCCCGTGGTATGGGGAGGGTCCAGGAC +
Preference number: 1 (lower is better)
Translates to: NSSSYSKNSRKQSQP*CLPCRARGMGRVQD
Trigger: GTCCTGGACCCTCCCCATACCACGGGCCCTGCAAGGGAGGCATCAGGGCTGGCTTTGTTTTCTGCTGTTCTTGGAATAGGAACTGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp CGCTGTCCCGGCAGGCAGGAGCGAGCGAGAGCCGCAATGCAGTTTTaGGGGGATCAGAACAGCAGTTCCTATTCCAAGAACAGCAGAAAA +
Preference number: 1 (lower is better)
Translates to: RCPGRQERARAAMQF*GDQNSSSYSKNSRK
Trigger: TTTTCTGCTGTTCTTGGAATAGGAACTGCTGTTCTGATCCCCCCAAAACTGCATTGCGGCTCTCGCTCGCTCCTGCCTGCCGGGACAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 90 bp CCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCTTATTaGAAAAAGAACTCCATAATGGACCAAGGTCGTCACGTTAACACA +
Preference number: 1 (lower is better)
Translates to: PLSLASSDLGPPGSY*KKNSIMDQGRHVNT
Trigger: TGTGTTAACGTGACGACCTTGGTCCATTATGGAGTTCTTTTTCCAATAAGAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 90 bp AACTCCATAATGGACCAAGGTCGTCACGTTAACACAATGTCACTGTaGATCTGGCTTCAGGATGCTGAAAATGGGCCACGGGCCTGGGAT +
Preference number: 1 (lower is better)
Translates to: NSIMDQGRHVNTMSL*IWLQDAENGPRAWD
Trigger: ATCCCAGGCCCGTGGCCCATTTTCAGCATCCTGAAGCCAGATTCACAGTGACATTGTGTTAACGTGACGACCTTGGTCCATTATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCCACAAGCTCGGCCGTTaGCGAGGGACGGAGCACGGC +
Preference number: 2 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGHKLGR*RGTEHG
Trigger: GCCGTGCTCCGTCCCTCGCCAACGGCCGAGCTTGTG...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
3UTR-3UTR GCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGCCACGGGCCTGGGATaGTCCGAGGTGGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLATGLG*SEVGIP
Trigger: AGGGATGCCCACCTCGGAGCATCCCAGGCCCGTGGC...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGGCTGGGGATGGCGGATaGGCTGGGGGACCGGGAACC +
Preference number: 2 (lower is better)
Translates to: SAALHALSTLRLPRWTPGAGDGG*AGGPGT
Trigger: GGTTCCCGGTCCCCCAGCCCATCCGCCATCCCCAGC...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCCACCTGCCACGACCCTaGGCTGCCAAGAAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLHLPRP*AAKKGQ
Trigger: CTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTG...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAATCCCAGCCCAGCCCTaGGCGGGCGGGTGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGIPAQP*AGGWVD
Trigger: GTCCACCCACCCGCCCGCCCAGGGCTGGGCTGGGAT...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGATGTCCACTTTGCGCCTaGCCCGGTGGACGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGCPLCA*PGGRQG
Trigger: GCCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACA...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTAGGTGGGTGGCGGGCTaGTTTGGGGCGCATGGCCTC +
Preference number: 2 (lower is better)
Translates to: AHLREAPEPPLGTGPAKARWVAG*FGAHGL
Trigger: GAGGCCATGCGCCCCAAAGCAGCCCGCCACCCACCT...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCCACAAGCTCGGCCGTTaGCGAGGGACGGAGCACGGC +
Preference number: 2 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSHKLGR*RGTEHG
Trigger: GCCGTGCTCCGTCCCTCGCCAACGGCCGAGCTTGTG...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCATCCCAGCCCAGCCCTaGGCGGGCGGGTGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGIPAQP*AGGWVD
Trigger: GTCCACCCACCCGCCCGCCCAGGGCTGGGCTGGGAT...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCATCCCAGCCCAGCCCTaGGCGGGCGGGTGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRIPAQP*AGGWVD
Trigger: GTCCACCCACCCGCCCGCCCAGGGCTGGGCTGGGAT...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
3UTR-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCTTGCGCCTGCCCCGGTaGACGCCAGGGCTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFLRLPR*TPGLCV
Trigger: CACACAGAGCCCTGGCGTCCACCGGGGCAGGCGCAA...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGGGACCCTCGCTCCCTaGCAGTCCCCCACACTCTTG +
Preference number: 2 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAGTLAP*QSPTLL
Trigger: CAAGAGTGTGGGGGACTGGCAGGGAGCGAGGGTCCC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTGGGACCCTCGCTCCCTaGCAGTCCCCCACACTCTTG +
Preference number: 2 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGGTLAP*QSPTLL
Trigger: CAAGAGTGTGGGGGACTGGCAGGGAGCGAGGGTCCC...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGATCTCAGGGAGGACCGTaGTCCTCGTCTCGGGGACCC +
Preference number: 2 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGSQGGP*SSSRGP
Trigger: GGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGA...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGCAGGGCCCGTGGTATaGGGAGGGTCCAGGACAGCT +
Preference number: 2 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAAGPVV*GGSRTA
Trigger: AGCTGTCCTGGACCCTCCCCATACCACGGGCCCTGC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCGCAGGGCCCGTGGTATaGGGAGGGTCCAGGACAGCT +
Preference number: 2 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFAGPVV*GGSRTA
Trigger: AGCTGTCCTGGACCCTCCCCATACCACGGGCCCTGC...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCCACCTCTGCCTACCGTaGGCTCCTGACAAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSHLCLP*APDKAL
Trigger: CAGGGCCTTGTCAGGAGCTCACGGTAGGCAGAGGTG...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCATGCTCTGTCCACTTTaGGCCTGCCCCGGTGGACGC +
Preference number: 2 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSMLCPL*ACPGGR
Trigger: GCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCAT...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCACAGGGACGCCTGGCTaGTGGCTCCTGGCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPTGTPG*WLLAGP
Trigger: GGGCCCAGCCAGGAGCCAGCAGCCAGGCGTCCCTGT...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCCACAAGCTCGGCCGTTaGCGAGGGACGGAGCACGGC +
Preference number: 2 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRHKLGR*RGTEHG
Trigger: GCCGTGCTCCGTCCCTCGCCAACGGCCGAGCTTGTG...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
3UTR-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGGGGCTTCGCGGGAGGTaGACAACCGGGGGCGGGCTG +
Preference number: 2 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEGLRGR*TTGGGL
Trigger: CAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCC...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTAGGGCTTCGAGGGGATaGAGACAGGGCGAGGAGGGT +
Preference number: 2 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGRASRG*RQGEEG
Trigger: ACCCTCCTCGCCCTGTCTCCATCCCCTCGAAGCCCT...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAACTTCCCGGCAAAGGTaGCCACCGATGGGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGTSRQR*PPMGLP
Trigger: AGGCAGGCCCATCGGTGGCCACCTTTGCCGGGAAGT...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCACTAGCAGGCACCTCTaGGAGAGGCTGGCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFTSRHL*ERLAGW
Trigger: CCAGCCTGCCAGCCTCTCCCAGAGGTGCCTGCTAGT...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCGGGCCCCACTGTCCCTaGCAAGCTCGGACCTCGGTC +
Preference number: 2 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGGPHCP*QARTSV
Trigger: GACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCC...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTGCAGCAGGAGCAACGTaGCCAGGGAGCCTTCTCCTA +
Preference number: 2 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGAAGAT*PGSLLL
Trigger: TAGGAGAAGGCTCCCTGGTCACGTTGCTCCTGCTGC...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGGCCTCCCAGGGTGAGTaGGGGGCCGAGTCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEASQGE*GAESCP
Trigger: GGGGCAAGACTCGGCCCCTCACTCACCCTGGGAGGC...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAGGGGGTCCGCCGCCCTaGATGCTCTGTCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: PSPPATTLSCQEGAASRPGGPPP*MLCPLC
Trigger: GCAAAGTGGACAGAGCATGCAGGGCGGCGGACCCCC...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTGGGGGTCCGCCGCCCTaGATGCTCTGTCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGGGPPP*MLCPLC
Trigger: GCAAAGTGGACAGAGCATGCAGGGCGGCGGACCCCC...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCGCCAGCAGACCACGCTaGCCAAGAGAGGGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGASRPR*PREGVW
Trigger: CCACACCCCCTCTCTTGGGCAGCGTGGTCTGCTGGC...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGTCGCGGCCTCGCGATTaGGCTTCGCGGGAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMSRPRD*ASREVD
Trigger: GTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCCGGAAGTCTGTTCTGTaGCCCTGGCAGAGGCACCTC +
Preference number: 2 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFRKSVL*PWQRHL
Trigger: GAGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCG...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCGAACACAGGGACGCCTaGCTGCTGGCTCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGEHRDA*LLAPGW
Trigger: CCAGCCAGGAGCCAGCAGCCAGGCGTCCCTGTGTTC...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCGCAACCTCCCCACGTaGGCCTGCCCCTCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPRNLPT*ACPSGS
Trigger: GCTTCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCG...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGGCGAAACAGGAAGGTaGGGACGCCATGCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAGETGR*GRHALR
Trigger: CCTGAGAGCATGGCGTCCCCACCTTCCTGTTTCGCC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTACACACAAAAGGCCGTaGTACAGACCCCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: AHLREAPEPPLGTGPAKATHKRP*YRPPGR
Trigger: CCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGT...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACTGTCCACTTTGCGCCTaGCCCGGTGGACGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: MLSGGRALAELRRRGPMYCPLCA*PGGRQG
Trigger: GCCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACA...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGGCCACGGGCCTGGGATaGTCCGAGGTGGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEATGLG*SEVGIP
Trigger: AGGGATGCCCACCTCGGAGCATCCCAGGCCCGTGGC...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGCACAAGCTCGGCCGTTaGCGAGGGACGGAGCACGGC +
Preference number: 2 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEHKLGR*RGTEHG
Trigger: GCCGTGCTCCGTCCCTCGCCAACGGCCGAGCTTGTG...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCGGTGGCGGGCTGCTTTaGGGCGCATGGCCTCCATTT +
Preference number: 2 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGGGGLL*GAWPPF
Trigger: AAATGGAGGCCATGCGCCCCAAAGCAGCCCGCCACC...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGACTTCTTACACTCAGGTaGGTGGCGGGCTGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGLLTLR*VAGCFG
Trigger: CCCAAAGCAGCCCGCCACCCACCTGAGTGTAAGAAG...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCCTTCTTACACTCAGGTaGGTGGCGGGCTGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSLLTLR*VAGCFG
Trigger: CCCAAAGCAGCCCGCCACCCACCTGAGTGTAAGAAG...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGCGGAAGTCTGTTCTGTaGCCCTGGCAGAGGCACCTC +
Preference number: 2 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGRKSVL*PWQRHL
Trigger: GAGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCG...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTGAGAGGCTGGCAGGCTaGGTCTTTGAGAGACCCTCA +
Preference number: 2 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGERLAG*VFERPS
Trigger: TGAGGGTCTCTCAAAGACCCAGCCTGCCAGCCTCTC...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAAGTCCCCCACACTCTTaGGGCAGAGAGGTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGSPPHS*GREVSA
Trigger: AGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACT...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTGGGATGCTCCGAGGTaGGCATCCCTCCTCTCCTAT +
Preference number: 2 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGWDAPR*ASLLSY
Trigger: ATAGGAGAGGAGGGATGCCCACCTCGGAGCATCCCA...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACGGGCCCCACTGTCCCTaGCAAGCTCGGACCTCGGTC +
Preference number: 2 (lower is better)
Translates to: MLSGGRALAELRRRGPMYGPHCP*QARTSV
Trigger: GACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCC...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCAGGGTGGAGAGGGGATaGAATGCCAGTTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCRVERG*NASSTQ
Trigger: CTGGGTGGAACTGGCATTTCATCCCCTCTCCACCCT...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGGCTTCAGGATGCTaGAAATGGGCCACGGGCCTG +
Preference number: 2 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGLASGC*KWATGL
Trigger: CAGGCCCGTGGCCCATTTTCAGCATCCTGAAGCCAG...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGCACGGCCCACAGCCCTaGCGGACCATGCGCGCCCCT +
Preference number: 2 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQHGPQP*RTMRAP
Trigger: AGGGGCGCGCATGGTCCGCCAGGGCTGTGGGCCGTG...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCACACGGCCCACAGCCCTaGCGGACCATGCGCGCCCCT +
Preference number: 2 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAHGPQP*RTMRAP
Trigger: AGGGGCGCGCATGGTCCGCCAGGGCTGTGGGCCGTG...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGACTTCCCGGCAAAGGTaGCCACCGATGGGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMTSRQR*PPMGLP
Trigger: AGGCAGGCCCATCGGTGGCCACCTTTGCCGGGAAGT...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGTTACACTCAGGTGGGTaGCGGGCTGCTTTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMLHSGG*RAALGR
Trigger: GCGCCCCAAAGCAGCCCGCCACCCACCTGAGTGTAA...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCTTACACTCAGGTGGGTaGCGGGCTGCTTTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPLHSGG*RAALGR
Trigger: GCGCCCCAAAGCAGCCCGCCACCCACCTGAGTGTAA...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAAGCCAGAGGGTAGGGTaGAGAGGGGATGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGSQRVG*RGDEMP
Trigger: TGGCATTTCATCCCCTCTCCACCCTACCCTCTGGCT...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCGCCTTCTCCTATGAGTaGCCACTTGGCTGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFAFSYE*PLGCSD
Trigger: GTCTGAGCAGCCAAGTGGCCACTCATAGGAGAAGGC...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTCTCAATGCCTTCTTTTaGAAACCGCATCCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGLNAFF*KPHPGG
Trigger: CCCGCCTGGATGCGGTTTTCAAAAGAAGGCATTGAG...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCGGTCCAGGAGGGGCGTaGATCCTTCTGGAACACAGG +
Preference number: 2 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPGPGGA*ILLEHR
Trigger: CCTGTGTTCCAGAAGGATTCACGCCCCTCCTGGACC...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCTCAGGCCAAACACACTaGTGCCAACACTCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCSGQTH*CQHSPP
Trigger: GGGAGGAGAGTGTTGGCATCAGTGTGTTTGGCCTGA...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTCAAACAGTCGGAAAATaGGCCACGGCCCACAGCCCT +
Preference number: 2 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGQTVGK*ATAHSP
Trigger: AGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTG...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGGCTGGGGATGGCGGATaGGCTGGGGGACCGGGAACC +
Preference number: 2 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRAGDGG*AGGPGT
Trigger: GGTTCCCGGTCCCCCAGCCCATCCGCCATCCCCAGC...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTAAAGGGACCTTGACCTaGACAGACCAACAGTGTCCC +
Preference number: 2 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAKGTLT*TDQQCP
Trigger: GGGACACTGTTGGTCTGTCCAGGTCAAGGTCCCTTT...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGCTGCTGGCTCCTGGCTaGGCCCCGGGTACTCGCGTG +
Preference number: 2 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQLLAPG*APGTRV
Trigger: CACGCGAGTACCCGGGGCCCAGCCAGGAGCCAGCAG...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCCAAGACTTGCCACCCTaGGTAGTGACGTCGGCGAAA +
Preference number: 2 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCQDLPP*VVTSAK
Trigger: TTTCGCCGACGTCACTACCCAGGGTGGCAAGTCTTG...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGGTAGCCCCAGAACTTTaGGAGGCCGAGGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMVAPEL*EAEEGG
Trigger: TCCTCCCTCCTCGGCCTCCCAAAGTTCTGGGGCTAC...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 90 bp GTCCACACCGAAGACCAGAGGACAAGCAGTGGCGCCCGCCGGAGGTaGGACGGATGGGGTATGAGGTTTCCTAGCATGGTCCTCAATGCC +
Preference number: 2 (lower is better)
Translates to: VHTEDQRTSSGARRR*DGWGMRFPSMVLNA
Trigger: GGCATTGAGGACCATGCTAGGAAACCTCATACCCCATCCGTCCAACCTCCGGCGGGCGCCACTGCTTGTCCTCTGGTCTTCGGTGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACCTGGCTTCAGGATGCTaGAAATGGGCCACGGGCCTG +
Preference number: 2 (lower is better)
Translates to: MLSGGRALAELRRRGPMYLASGC*KWATGL
Trigger: CAGGCCCGTGGCCCATTTTCAGCATCCTGAAGCCAG...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGACAATGAAACTCCCCTaGCCACCTCTGCCTGTACCT +
Preference number: 2 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGTMKLP*PPLPVP
Trigger: AGGTACAGGCAGAGGTGGCCAGGGGAGTTTCATTGT...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCAAAGGGACCTTGACCTaGACAGACCAACAGTGTCCC +
Preference number: 2 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCKGTLT*TDQQCP
Trigger: GGGACACTGTTGGTCTGTCCAGGTCAAGGTCCCTTT...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 90 bp CACAGAGAGAGGCTGAACTTGGGCTACACCCTCTGCCTGCAAGACTaGCCACCCTGGGTAGTGACGTCGGCGAAACAGGAAGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: HRERLNLGYTLCLQD*PPWVVTSAKQEGGD
Trigger: GTCCCCACCTTCCTGTTTCGCCGACGTCACTACCCAGGGTGGCAAGTCTTGCAGGCAGAGGGTGTAGCCCAAGTTCAGCCTCTCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACCAAACAGTCGGAAAATaGGCCACGGCCCACAGCCCT +
Preference number: 2 (lower is better)
Translates to: MLSGGRALAELRRRGPMYQTVGK*ATAHSP
Trigger: AGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTG...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTGGAGAGGGGATGAAATaGCAGTTCCACCCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGGEGMK*QFHPGS
Trigger: AGAACCTGGGTGGAACTGGCATTTCATCCCCTCTCC...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGGCCACGACCCTGAGCTaGCAAGAAGGGGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRATTLS*QEGAAS
Trigger: GCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGC...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTACATGCCAAAGGCATTaGCGGGCAAAGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGTCQRH*RAKRGR
Trigger: CCTTCCTCTCTTTGCCCGGCAATGCCTTTGGCATGT...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGTTGGGCTACACCCTCTaGCTGCAAGACTTGCCACCC +
Preference number: 2 (lower is better)
Translates to: GGADGRMSQGPPNHMPQELGYTL*LQDLPP
Trigger: GGGTGGCAAGTCTTGCAGGCAGAGGGTGTAGCCCAA...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAGGATGGCGGATGGGCTaGGGGACCGGGAACCAAGGA +
Preference number: 2 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAGWRMG*GTGNQG
Trigger: TCCTTGGTTCCCGGTCCCCCAGCCCATCCGCCATCC...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGGGATGGCGGATGGGCTaGGGGACCGGGAACCAAGGA +
Preference number: 2 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRGWRMG*GTGNQG
Trigger: TCCTTGGTTCCCGGTCCCCCAGCCCATCCGCCATCC...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGCGGAGGTTGGACGGATaGGGTATGAGGTTTCCTAGC +
Preference number: 2 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMRRLDG*GMRFPS
Trigger: GCTAGGAAACCTCATACCCCATCCGTCCAACCTCCG...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCACCAGAGGACAAGCAGTaGCGCCCGCCGGAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAPEDKQ*RPPEVG
Trigger: TCCAACCTCCGGCGGGCGCCACTGCTTGTCCTCTGG...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCACCAAGAGGTAACCCCTaGCTCCGCGTTCGACCCCTC +
Preference number: 2 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAPRGNP*LRVRPL
Trigger: GAGGGGTCGAACGCGGAGGCAGGGGTTACCTCTTGG...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGCCAAGAGGTAACCCCTaGCTCCGCGTTCGACCCCTC +
Preference number: 2 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQPRGNP*LRVRPL
Trigger: GAGGGGTCGAACGCGGAGGCAGGGGTTACCTCTTGG...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGTCCCCTGGCCACCTCTaGCTGTACCTTAAATTAACA +
Preference number: 2 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGSPGHL*LYLKLT
Trigger: TGTTAATTTAAGGTACAGGCAGAGGTGGCCAGGGGA...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCAGAGAGGTCTCAGCTaGCACTGGTCATGGCATCTT +
Preference number: 2 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPQRGLS*HWSWHL
Trigger: AAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTG...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGAGGGCTTCGAGGGGATaGAGACAGGGCGAGGAGGGT +
Preference number: 2 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLRASRG*RQGEEG
Trigger: ACCCTCCTCGCCCTGTCTCCATCCCCTCGAAGCCCT...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGACTAGCAGGCACCTCTaGGAGAGGCTGGCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRTSRHL*ERLAGW
Trigger: CCAGCCTGCCAGCCTCTCCCAGAGGTGCCTGCTAGT...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGGGTCTCAGCTGCCACTaGTCATGGCATCTTCACACA +
Preference number: 2 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMGLSCH*SWHLHT
Trigger: TGTGTGAAGATGCCATGACCAGTGGCAGCTGAGACC...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGGCCGCAATGCAGTTTTaGGGGGATCAGAACAGCAGT +
Preference number: 2 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMAAMQF*GDQNSS
Trigger: ACTGCTGTTCTGATCCCCCCAAAACTGCATTGCGGC...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTAAAGAGAGGAAGGGATaGTTGCTAGGATCAAACCCA +
Preference number: 2 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAKERKG*LLGSNP
Trigger: TGGGTTTGATCCTAGCAACCATCCCTTCCTCTCTTT...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTAAAGAGAGGAAGGGATaGTTGCTAGGATCAAACCCA +
Preference number: 2 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGKERKG*LLGSNP
Trigger: TGGGTTTGATCCTAGCAACCATCCCTTCCTCTCTTT...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGCGGAGGTTGGACGGATaGGGTATGAGGTTTCCTAGC +
Preference number: 2 (lower is better)
Translates to: GGADGRMSQGPPNHMPQERRLDG*GMRFPS
Trigger: GCTAGGAAACCTCATACCCCATCCGTCCAACCTCCG...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 90 bp GGGCAAAGAACCCTCTTCTCTGGAGGACACAGAGAGAGGCTGAACTaGGGCTACACCCTCTGCCTGCAAGACTTGCCACCCTGGGTAGTG +
Preference number: 2 (lower is better)
Translates to: GQRTLFSGGHRERLN*GYTLCLQDLPPWVV
Trigger: CACTACCCAGGGTGGCAAGTCTTGCAGGCAGAGGGTGTAGCCCAAGTTCAGCCTCTCTCTGTGTCCTCCAGAGAAGAGGGTTCTTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGGGGAGCCTTCTCCTATaGGTGGCCACTTGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQGSLLL*VATWLL
Trigger: GAGCAGCCAAGTGGCCACTCATAGGAGAAGGCTCCC...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCAACACAATGTCACTGTaGATCTGGCTTCAGGATGCT +
Preference number: 2 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCNTMSL*IWLQDA
Trigger: AGCATCCTGAAGCCAGATTCACAGTGACATTGTGTT...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCATCCCCTGGCCACCTCTaGCTGTACCTTAAATTAACA +
Preference number: 2 (lower is better)
Translates to: PSPPATTLSCQEGAASRPSPGHL*LYLKLT
Trigger: TGTTAATTTAAGGTACAGGCAGAGGTGGCCAGGGGA...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTGTTTTGAGATAACTTaGGGTGAAACCCAAAAGCCG +
Preference number: 2 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGCFEIT*GETQKP
Trigger: CGGCTTTTGGGTTTCACCCCAAGTTATCTCAAAACA...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAGGGCGTGAATCCTTCTaGAACACAGGGACGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAGRESF*NTGTPG
Trigger: GCCAGGCGTCCCTGTGTTCCAGAAGGATTCACGCCC...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCCACCTCTGCCTACCGTaGGCTCCTGACAAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSHLCLP*APDKAL
Trigger: CAGGGCCTTGTCAGGAGCTCACGGTAGGCAGAGGTG...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCCTCTCAGGCAAGTGTTaGCTTAAAAGATTAAGCGAG +
Preference number: 2 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCLSGKC*LKRLSE
Trigger: CTCGCTTAATCTTTTAAGCCAACACTTGCCTGAGAG...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGTGGACGGATGGGGTATaGGGTTTCCTAGCATGGTCC +
Preference number: 2 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQWTDGV*GFLAWS
Trigger: GGACCATGCTAGGAAACCTCATACCCCATCCGTCCA...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTTGTTTTGAGATAACTTaGGGTGAAACCCAAAAGCCG +
Preference number: 2 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGCFEIT*GETQKP
Trigger: CGGCTTTTGGGTTTCACCCCAAGTTATCTCAAAACA...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCAGGGTGGAGAGGGGATaGAATGCCAGTTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSRVERG*NASSTQ
Trigger: CTGGGTGGAACTGGCATTTCATCCCCTCTCCACCCT...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR TCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCACACACAAAAGGCCGTaGTACAGACCCCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSTHKRP*YRPPGR
Trigger: CCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGT...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCACAGAGAGGTCTCAGCTaGCACTGGTCATGGCATCTT +
Preference number: 2 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAQRGLS*HWSWHL
Trigger: AAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTG...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAGGAGAGGGGATGAAATaGCAGTTCCACCCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAGEGMK*QFHPGS
Trigger: AGAACCTGGGTGGAACTGGCATTTCATCCCCTCTCC...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR GCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGACATGCCAAAGGCATTaGCGGGCAAAGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRTCQRH*RAKRGR
Trigger: CCTTCCTCTCTTTGCCCGGCAATGCCTTTGGCATGT...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCGAGAGGCTGGCAGGCTaGGTCTTTGAGAGACCCTCA +
Preference number: 2 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSERLAG*VFERPS
Trigger: TGAGGGTCTCTCAAAGACCCAGCCTGCCAGCCTCTC...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCAGTCCCCCACACTCTTaGGGCAGAGAGGTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSSPPHS*GREVSA
Trigger: AGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACT...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 90 bp CAGAAAACTCAGGAAGCAGGTCGCAGCCCGAGTTTGGAAGGATGTTaGGTTAAAAACCAGCTCAAGGCCCACCTAAGGGAGGCACCAGAG +
Preference number: 2 (lower is better)
Translates to: QKTQEAGRSPSLEGC*VKNQLKAHLREAPE
Trigger: CTCTGGTGCCTCCCTTAGGTGGGCCTTGAGCTGGTTTTTAACCAAACATCCTTCCAAACTCGGGCTGCGACCTGCTTCCTGAGTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAAAGAACCCTCTTCTCTaGAGGACACAGAGAGAGGCT +
Preference number: 2 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAKNPLL*RTQREA
Trigger: AGCCTCTCTCTGTGTCCTCCAGAGAAGAGGGTTCTT...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGCTCTCAGGCAAGTGTTaGCTTAAAAGATTAAGCGAG +
Preference number: 2 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQLSGKC*LKRLSE
Trigger: CTCGCTTAATCTTTTAAGCCAACACTTGCCTGAGAG...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 90 bp TCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAGCCCGAGTTaGGAAGGATGTTTGGTTAAAAACCAGCTCAAGGCCCACCTAAGG +
Preference number: 2 (lower is better)
Translates to: SLEIQKTQEAGRSPS*EGCLVKNQLKAHLR
Trigger: CCTTAGGTGGGCCTTGAGCTGGTTTTTAACCAAACATCCTTCCAAACTCGGGCTGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 72 bp GGCCGAGTGTGCCCTGAGCCGCCTGCCCCCGCCCGCTaGGGCCGCCCACAATCATGGCCCACGGGACGTCCG +
Preference number: 3 (lower is better)
Translates to: GRVCPEPPAPAR*GRPQSWPTGRP
Trigger: CGGACGTCCCGTGGGCCATGATTGTGGGCGGCCGCAGCGGGCGGGGGCAGGCGGCTCAGGGCACACTCGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CCCTCACGGGGCCTTCCGGTCACTTCCCGGCAAAGGTaGCCACCGATGGGCCTGCCTGCGGTGAGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: PSRGLPVTSRQR*PPMGLPAVRQG
Trigger: GCCCTGCCTCACCGCAGGCAGGCCCATCGGTGGCCACCTTTGCCGGGAAGTGACCGGAAGGCCCCGTGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CCGCCTGCCCCCGCCCGCTGCGGCCGCCCACAATCATaGCCCACGGGACGTCCGTGGCAGAGTATACATGCT +
Preference number: 3 (lower is better)
Translates to: PPAPARCGRPQS*PTGRPWQSIHA
Trigger: AGCATGTATACTCTGCCACGGACGTCCCGTGGGCCATGATTGTGGGCGGCCGCAGCGGGCGGGGGCAGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCCTCGCGGCCTCGCGATaGGGCTTCGCGGGAGGTGGA +
Preference number: 3 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFLAASR*GFAGGG
Trigger: TCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAG...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCCAGTCCCCCACACTCTaGGGGCAGAGAGGTCTCAGC +
Preference number: 3 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLQSPTL*GQRGLS
Trigger: GCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACTG...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTGGCGCCCGCCGGAGGTaGGACGGATGGGGTATGAGG +
Preference number: 3 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGGARRR*DGWGMR
Trigger: CCTCATACCCCATCCGTCCAACCTCCGGCGGGCGCC...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGGCGCCCGCCGGAGGTaGGACGGATGGGGTATGAGG +
Preference number: 3 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAGARRR*DGWGMR
Trigger: CCTCATACCCCATCCGTCCAACCTCCGGCGGGCGCC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGCTCGCGGCCTCGCGATaGGGCTTCGCGGGAGGTGGA +
Preference number: 3 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGLAASR*GFAGGG
Trigger: TCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAG...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGGGTGGCGGGCTGCTTaGGGGCGCATGGCCTCCATT +
Preference number: 3 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAGWRAA*GRMASI
Trigger: AATGGAGGCCATGCGCCCCAAAGCAGCCCGCCACCC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 72 bp GGTCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTaGCCCGGTGGACGCCAGGGCTCTGTGTGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: GPPPCMLCPLCA*PGGRQGSVCAQ
Trigger: CTGAGCACACACAGAGCCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 72 bp GGGCGTGAATCCTTCTGGAACACAGGGACGCCTGGCTaGTGGCTCCTGGCTGGGCCCCGGGTACTCGCGTGG +
Preference number: 3 (lower is better)
Translates to: GRESFWNTGTPG*WLLAGPRVLAW
Trigger: CCACGCGAGTACCCGGGGCCCAGCCAGGAGCCAGCAGCCAGGCGTCCCTGTGTTCCAGAAGGATTCACGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGGGGTGGCGGGCTGCTTaGGGGCGCATGGCCTCCATT +
Preference number: 3 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGGWRAA*GRMASI
Trigger: AATGGAGGCCATGCGCCCCAAAGCAGCCCGCCACCC...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 72 bp CTGTGCCACACGGAAGAGTATGGGGTGCCTGACCCCTaGCTGGCCAGGACCCTGGAAGGCCAAGGGCCGCAG +
Preference number: 3 (lower is better)
Translates to: LCHTEEYGVPDP*LARTLEGQGPQ
Trigger: CTGCGGCCCTTGGCCTTCCAGGGTCCTGGCCAGGCAGGGGTCAGGCACCCCATACTCTTCCGTGTGGCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CGGGGACCCTCGCTCCCTGCCAGTCCCCCACACTCTTaGGGCAGAGAGGTCTCAGCTGCCACTGGTCATGGC +
Preference number: 3 (lower is better)
Translates to: RGPSLPASPPHS*GREVSAATGHG
Trigger: GCCATGACCAGTGGCAGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACTGGCAGGGAGCGAGGGTCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp GCCACACGGAAGAGTATGGGGTGCCTGACCCCTGCCTaGCCAGGACCCTGGAAGGCCAAGGGCCGCAGGGAA +
Preference number: 3 (lower is better)
Translates to: ATRKSMGCLTPA*PGPWKAKGRRE
Trigger: TTCCCTGCGGCCCTTGGCCTTCCAGGGTCCTGGCCAGGCAGGGGTCAGGCACCCCATACTCTTCCGTGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 72 bp CATGTGGGTGACGGGCCAGGCCCAGGGGCACATCTGTaGCATCGGCTTTGTGGCCCTTGCTCTGAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: HVGDGPGPGAHL*HRLCGPCSESP
Trigger: GGGGCTCTCAGAGCAAGGGCCACAAAGCCGATGGCACAGATGTGCCCCTGGGCCTGGCCCGTCACCCACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTaGCAAGCTCGGACCTCGGTCCACCAGGTTCTTATT +
Preference number: 3 (lower is better)
Translates to: LGPGYSRGPHCP*QARTSVHQVLI
Trigger: AATAAGAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTaGGCCTGCCCCTCAGGAAGCGGCTCGTCAAATCAC +
Preference number: 3 (lower is better)
Translates to: TAGLCTRRNLPT*ACPSGSGSSNH
Trigger: GTGATTTGACGAGCCGCTTCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGGCCCTGATGCCTCCCTaGCAGGGCCCGTGGTATGGG +
Preference number: 3 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEALMPP*QGPWYG
Trigger: CCCATACCACGGGCCCTGCAAGGGAGGCATCAGGGC...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp AAATGCCAGTTCCACCCAGGTTCTCAGGGAGGACCGTaGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGT +
Preference number: 3 (lower is better)
Translates to: KCQFHPGSQGGP*SSSRGPSLPAS
Trigger: ACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAACCTGGGTGGAACTGGCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp AAGGTGGGGACGCCATGCTCTCAGGAGGGAGAGCCCTaGCTGAACTTCGCCGTAGGGGACCGATGTACCCAG +
Preference number: 3 (lower is better)
Translates to: KVGTPCSQEGEP*LNFAVGDRCTQ
Trigger: CTGGGTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCATGGCGTCCCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp TCCCAGGGGGAGAATGGTGTCTGTGGCCAGTGGGGGTaGGTGGACACCTGTGCCACACGGAAGAGTATGGGG +
Preference number: 3 (lower is better)
Translates to: SQGENGVCGQWG*VDTCATRKSMG
Trigger: CCCCATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACCATTCTCCCCCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp TGCGGCCGCCCACAATCATGGCCCACGGGACGTCCGTaGCAGAGTATACATGCTAGGGTTGGGGGAGAGCCA +
Preference number: 3 (lower is better)
Translates to: CGRPQSWPTGRP*QSIHARVGGEP
Trigger: TGGCTCTCCCCCAACCCTAGCATGTATACTCTGCCACGGACGTCCCGTGGGCCATGATTGTGGGCGGCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTCACATGCCAAAGGCATaGCCGGGCAAAGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAHMPKA*PGKERK
Trigger: CTTCCTCTCTTTGCCCGGCAATGCCTTTGGCATGTG...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTCCTATGAGTGGCCACTaGGCTGCTCAGACACATGCC +
Preference number: 3 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGPMSGH*AAQTHA
Trigger: GGCATGTGTCTGAGCAGCCAAGTGGCCACTCATAGG...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTCCTCAATGCCTTCTTTaGAAAACCGCATCCAGGCGG +
Preference number: 3 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAPQCLL*KTASRR
Trigger: CCGCCTGGATGCGGTTTTCAAAAGAAGGCATTGAGG...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CCTATCTGTCCACACCGAAGACCAGAGGACAAGCAGTaGCGCCCGCCGGAGGTTGGACGGATGGGGTATGAG +
Preference number: 3 (lower is better)
Translates to: PICPHRRPEDKQ*RPPEVGRMGYE
Trigger: CTCATACCCCATCCGTCCAACCTCCGGCGGGCGCCACTGCTTGTCCTCTGGTCTTCGGTGTGGACAGATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp GTGCTGGCCAGGAGCCCAGAAGGTGGATACAGGCTCTaGAATCATCAGAGCCAGCACCACCCCAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: VLARSPEGGYRL*NHQSQHHPKAQ
Trigger: CTGGGCCTTGGGGTGGTGCTGGCTCTGATGATTCCAGAGCCTGTATCCACCTTCTGGGCTCCTGGCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGGCCCTGATGCCTCCCTaGCAGGGCCCGTGGTATGGG +
Preference number: 3 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQALMPP*QGPWYG
Trigger: CCCATACCACGGGCCCTGCAAGGGAGGCATCAGGGC...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 72 bp GGCCGCAGGGAACAGGACACTTGGCTCAGGTGGAGCTaGCGGGAGAATGTCCCAGGGACCCCCAAATCACAT +
Preference number: 3 (lower is better)
Translates to: GRREQDTWLRWS*RENVPGTPKSH
Trigger: ATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCCTGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CCCAAAAGCCGGACTCACTTCTTACACTCAGGTGGGTaGCGGGCTGCTTTGGGGCGCATGGCCTCCATTTCC +
Preference number: 3 (lower is better)
Translates to: PKSRTHFLHSGG*RAALGRMASIS
Trigger: GGAAATGGAGGCCATGCGCCCCAAAGCAGCCCGCCACCCACCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp AGGACAAGCAGTGGCGCCCGCCGGAGGTTGGACGGATaGGGTATGAGGTTTCCTAGCATGGTCCTCAATGCC +
Preference number: 3 (lower is better)
Translates to: RTSSGARRRLDG*GMRFPSMVLNA
Trigger: GGCATTGAGGACCATGCTAGGAAACCTCATACCCCATCCGTCCAACCTCCGGCGGGCGCCACTGCTTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp TTGGGCTACACCCTCTGCCTGCAAGACTTGCCACCCTaGGTAGTGACGTCGGCGAAACAGGAAGGTGGGGAC +
Preference number: 3 (lower is better)
Translates to: LGYTLCLQDLPP*VVTSAKQEGGD
Trigger: GTCCCCACCTTCCTGTTTCGCCGACGTCACTACCCAGGGTGGCAAGTCTTGCAGGCAGAGGGTGTAGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp GAACAGGGCTCGGACCGGCGGGTTTGCATATATCAGTaGGGCCACCCAGCCCCTAGGGGACAGTTTCCTACT +
Preference number: 3 (lower is better)
Translates to: EQGSDRRVCIYQ*GHPAPRGQFPT
Trigger: AGTAGGAAACTGTCCCCTAGGGGCTGGGTGGCCCCACTGATATATGCAAACCCGCCGGTCCGAGCCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 72 bp CAGCCTCTAACCCAGTGTAGACCAAGCATCCGGGCCTaGCCAAGGACACAGACGGCGGGTCTATGTACACGG +
Preference number: 3 (lower is better)
Translates to: QPLTQCRPSIRA*PRTQTAGLCTR
Trigger: CCGTGTACATAGACCCGCCGTCTGTGTCCTTGGTCAGGCCCGGATGCTTGGTCTACACTGGGTTAGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 72 bp CTCCTGGCTAGGGGTCCTCCCGGGAGCTTGGCCCCCTaGAGAAATCAGGCCAAACACACTGATGCCAACACT +
Preference number: 3 (lower is better)
Translates to: LLARGPPGSLAP*RNQAKHTDANT
Trigger: AGTGTTGGCATCAGTGTGTTTGGCCTGATTTCTTCAGGGGGCCAAGCTCCCGGGAGGACCCCTAGCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp GAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGTaGGTGGCGGGCTGCTTTGGGGCGCATGGCCTCCAT +
Preference number: 3 (lower is better)
Translates to: ETQKPDSLLTLR*VAGCFGAHGLH
Trigger: ATGGAGGCCATGCGCCCCAAAGCAGCCCGCCACCCACCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp ATCTGGCTTCAGGATGCTGAAAATGGGCCACGGGCCTaGGATGCTCCGAGGTGGGCATCCCTCCTCTCCTAT +
Preference number: 3 (lower is better)
Translates to: IWLQDAENGPRA*DAPRWASLLSY
Trigger: ATAGGAGAGGAGGGATGCCCACCTCGGAGCATCCCAGGCCCGTGGCCCATTTTCAGCATCCTGAAGCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CAGAGGGTCTGCAGAAGCCATGAGCACATGGGTGCGTaGGGAGAGCAGCCTCTAACCCAGTGTAGACCAAGC +
Preference number: 3 (lower is better)
Translates to: QRVCRSHEHMGA*GEQPLTQCRPS
Trigger: GCTTGGTCTACACTGGGTTAGAGGCTGCTCTCCCCACGCACCCATGTGCTCATGGCTTCTGCAGACCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCGAGAGGAAGGGATGGTaGCTAGGATCAAACCCAGCT +
Preference number: 3 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPERKGW*LGSNPA
Trigger: AGCTGGGTTTGATCCTAGCAACCATCCCTTCCTCTC...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 72 bp GCAGTGGCGCCCGCCGGAGGTTGGACGGATGGGGTATaGGGTTTCCTAGCATGGTCCTCAATGCCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: AVAPAGGWTDGV*GFLAWSSMPSF
Trigger: AAAAGAAGGCATTGAGGACCATGCTAGGAAACCTCATACCCCATCCGTCCAACCTCCGGCGGGCGCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 72 bp GTGAAGGTGATGGGAGCTGCTGTTTTCAGGGCGAGGTaGCAGAGGACCCCCGAATACCGCTGGACCTTACTC +
Preference number: 3 (lower is better)
Translates to: VKVMGAAVFRAR*QRTPEYRWTLL
Trigger: GAGTAAGGTCCAGCGGTATTCGGGGGTCCTCTGTCACCTCGCCCTGAAAACAGCAGCTCCCATCACCTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 72 bp CTAAAACACACACTGCTGTGTGTCTCCAAGTCCACCTaGCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: LKHTLLCVSKST*HDPELPRRGSQ
Trigger: CTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGGAGACACACAGCAGTGTGTGTTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 72 bp GACCAGGGAGCCTTCTCCTATGAGTGGCCACTTGGCTaGTCAGACACATGCCAAAGGCATTGCCGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: DQGAFSYEWPLG*SDTCQRHCRAK
Trigger: CTTTGCCCGGCAATGCCTTTGGCATGTGTCTGAGCAGCCAAGTGGCCACTCATAGGAGAAGGCTCCCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR GCA 72 bp CAGTCCCCCACACTCTTGGGGCAGAGAGGTCTCAGCTaGCACTGGTCATGGCATCTTCACACACACACTCTA +
Preference number: 3 (lower is better)
Translates to: QSPTLLGQRGLS*HWSWHLHTHTL
Trigger: TAGAGTGTGTGTGTGAAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp GGCAGGCAGGAGCGAGCGAGAGCCGCAATGCAGTTTTaGGGGGATCAGAACAGCAGTTCCTATTCCAAGAAC +
Preference number: 3 (lower is better)
Translates to: GRQERARAAMQF*GDQNSSSYSKN
Trigger: GTTCTTGGAATAGGAACTGCTGTTCTGATCCCCCCAAAACTGCATTGCGGCTCTCGCTCGCTCCTGCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CAGGAGCAACGTGACCAGGGAGCCTTCTCCTATGAGTaGCCACTTGGCTGCTCAGACACATGCCAAAGGCAT +
Preference number: 3 (lower is better)
Translates to: QEQRDQGAFSYE*PLGCSDTCQRH
Trigger: ATGCCTTTGGCATGTGTCTGAGCAGCCAAGTGGCCACTCATAGGAGAAGGCTCCCTGGTCACGTTGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTTCCACCAGGTTCTTATaGGAAAAAGAACTCCATAAT +
Preference number: 3 (lower is better)
Translates to: AHLREAPEPPLGTGPAKASTRFL*EKELHN
Trigger: ATTATGGAGTTCTTTTTCCAATAAGAACCTGGTGGA...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CTCTTGGGGCAGAGAGGTCTCAGCTGCCACTGGTCATaGCATCTTCACACACACACTCTAAGGACTAGCAGG +
Preference number: 3 (lower is better)
Translates to: LLGQRGLSCHWS*HLHTHTLRTSR
Trigger: CCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTGCCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CCA 72 bp CCCACACTCTTGGGGCAGAGAGGTCTCAGCTGCCACTaGTCATGGCATCTTCACACACACACTCTAAGGACT +
Preference number: 3 (lower is better)
Translates to: PTLLGQRGLSCH*SWHLHTHTLRT
Trigger: AGTCCTTAGAGTGTGTGTGTGAAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTGCCCCAAGAGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCCACATGCCAAAGGCATaGCCGGGCAAAGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSHMPKA*PGKERK
Trigger: CTTCCTCTCTTTGCCCGGCAATGCCTTTGGCATGTG...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR-3UTR CAA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCCCTCAATGCCTTCTTTaGAAAACCGCATCCAGGCGG +
Preference number: 3 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSPQCLL*KTASRR
Trigger: CCGCCTGGATGCGGTTTTCAAAAGAAGGCATTGAGG...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 72 bp ATGGACCAAGGTCGTCACGTTAACACAATGTCACTGTaGATCTGGCTTCAGGATGCTGAAAATGGGCCACGG +
Preference number: 3 (lower is better)
Translates to: MDQGRHVNTMSL*IWLQDAENGPR
Trigger: CCGTGGCCCATTTTCAGCATCCTGAAGCCAGATTCACAGTGACATTGTGTTAACGTGACGACCTTGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR TCA 72 bp ATGAGGTTTCCTAGCATGGTCCTCAATGCCTTCTTTTaGAAACCGCATCCAGGCGGGTTGCTTGTAATTTTA +
Preference number: 3 (lower is better)
Translates to: MRFPSMVLNAFF*KPHPGGLLVIL
Trigger: TAAAATTACAAGCAACCCGCCTGGATGCGGTTTTCAAAAGAAGGCATTGAGGACCATGCTAGGAAACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGGGCTTCGCGGGAGGTaGACAACCGGGGGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGGLRGR*TTGGGL
Trigger: CAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGATCCCAGCCCAGCCCTaGGCGGGCGGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRIPAQP*AGGWVD
Trigger: GTCCACCCACCCGCCCGCCCAGGGCTGGGCTGGGAT...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGCACGGCCCACAGCCCTaGCGGACCATGCGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRHGPQP*RTMRAP
Trigger: AGGGGCGCGCATGGTCCGCCAGGGCTGTGGGCCGTG...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR TCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGCCTCCCAGGGTGAGTaGGGGGCCGAGTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRASQGE*GAESCP
Trigger: GGGGCAAGACTCGGCCCCTCACTCACCCTGGGAGGC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGGCCGGCGCCACCGATaGCCAGGTGCGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGGRRHR*PGASGW
Trigger: CCAACCTGACGCACCTGGGCATCGGTGGCGCCGGCC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGCCGGCGCCACCGATaGCCAGGTGCGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGRRHR*PGASGW
Trigger: CCAACCTGACGCACCTGGGCATCGGTGGCGCCGGCC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGCGGCGGTGGCTGCTaGGAGCCCGCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGCGGGC*EPAWVK
Trigger: CTTCACCCAGGCGGGCTCCCAGCAGCCACCGCCGCA...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGTCCGGCAGGCTCCCGTaGCTGCCCGTGAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRSGRLP*LPVRPI
Trigger: GATGGGCCTCACGGGCAGCCACGGGAGCCTGCCGGA...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGCTTCGCGGGAGGTaGACAACCGGGGGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGGLRGR*TTGGGL
Trigger: CAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGCTGGGGATGGCGGATaGGCTGGGGGACCGGGAACC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRAGDGG*AGGPGT
Trigger: GGTTCCCGGTCCCCCAGCCCATCCGCCATCCCCAGC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGCCTGGCCAGGACCCTaGAAGGCCAAGGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGAWPGP*KAKGRR
Trigger: CCTGCGGCCCTTGGCCTTCCAGGGTCCTGGCCAGGC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGCGCTAGTGCGGTACTaGTGCAGAGCCGGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRALVRY*CRAGAE
Trigger: CTCGGCGCCGGCTCTGCAGCAGTACCGCACTAGCGC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGTGTCCACTTTGCGCCTaGCCCGGTGGACGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRCPLCA*PGGRQG
Trigger: GCCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACA...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGCCAGGTGCGTCAGGTTaGCCGCGAGGTTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRPGASG*PRGCRC
Trigger: GCACCGGCAACCTCGCGGCCAACCTGACGCACCTGG...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGTGTGCTCATTCCCTaGCCGGCGCCACCGATGCCC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGVLIP*PAPPMP
Trigger: GGGCATCGGTGGCGCCGGCCAGGGAATGAGCACACC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCTCCGGCAGGCTCCCGTaGCTGCCCGTGAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGSGRLP*LPVRPI
Trigger: GATGGGCCTCACGGGCAGCCACGGGAGCCTGCCGGA...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTCGCGGCCTCGCGATTaGGCTTCGCGGGAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGSRPRD*ASREVD
Trigger: GTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCTCGCGGCCTCGCGATTaGGCTTCGCGGGAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGSRPRD*ASREVD
Trigger: GTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCTTGCGCCTGCCCCGGTaGACGCCAGGGCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGLRLPR*TPGLCV
Trigger: CACACAGAGCCCTGGCGTCCACCGGGGCAGGCGCAA...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCCGCAACCTCCCCACGTaGGCCTGCCCCTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGRNLPT*ACPSGS
Trigger: GCTTCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCG...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCCCAGGGCACCACATGTaGGTGACGGGCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGPGHHM*VTGQAQ
Trigger: CTGGGCCTGGCCCGTCACCCACATGTGGTGCCCTGG...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGCCTGACCCCTGCCTaGCCAGGACCCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGCLTPA*PGPWKA
Trigger: GGCCTTCCAGGGTCCTGGCCAGGCAGGGGTCAGGCA...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCTCCGTGTTTGTCCACTaGCAGGGGCCGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGSVFVH*QGPAVW
Trigger: CCACACCGCCGGCCCCTGTCAGTGGACAAACACGGA...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR TCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGTGGGCGATGCCTGCTaGCGCCTTGCCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGVGDAC*RLASVL
Trigger: GAGCACAGAGGCAAGGCGTCAGCAGGCATCGCCCAC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR TCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGGGGCCCCTCGGCCTCTaGGACGGCTCCATCGGGACC +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGGPLGL*DGSIGT
Trigger: GGTCCCGATGGAGCCGTCTCAGAGGCCGAGGGGCCC...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
73% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCCCGCGAGGTTGCCGGTaGTGCTGGAGCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGPRGCR*CWSCSV
Trigger: CACTGAGCAGCTCCAGCAGCACCGGCAACCTCGCGG...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGAGAGGAGCCAGGTGTaGTCATTCCCTGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGERSQV*SFPGRR
Trigger: GCGCCGGCCAGGGAATGAGCACACCTGGCTCCTCTC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCACGCCAGCTGGGCGGTaGTGTGGAGAGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGTPAGR*CGEEPG
Trigger: ACCTGGCTCCTCTCCACAGCACCGCCCAGCTGGCGT...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGACGCCAGCTGGGCGGTaGTGTGGAGAGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRTPAGR*CGEEPG
Trigger: ACCTGGCTCCTCTCCACAGCACCGCCCAGCTGGCGT...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGACAGGGTGGGCGATaGCTGCTGACGCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGGQGGR*LLTPCL
Trigger: GAGGCAAGGCGTCAGCAGGCATCGCCCACCCTGTCC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGGGTCCGCCGCCCTaGATGCTCTGTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGGGPPP*MLCPLC
Trigger: GCAAAGTGGACAGAGCATGCAGGGCGGCGGACCCCC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGTGCCTGACCCCTaGCTGGCCAGGACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGGVPDP*LARTLE
Trigger: TTCCAGGGTCCTGGCCAGGCAGGGGTCAGGCACCCC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTCAGTGCAGGGAAGGTaGGCTCCTCGGGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGSVQGR*APRGPA
Trigger: CGCTGGACCCCGAGGAGCCCACCTTCCCTGCACTGA...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCCACAAGCTCGGCCGTTaGCGAGGGACGGAGCACGGC +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGHKLGR*RGTEHG
Trigger: GCCGTGCTCCGTCCCTCGCCAACGGCCGAGCTTGTG...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGGATGGCGGATGGGCTaGGGGACCGGGAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGGWRMG*GTGNQG
Trigger: TCCTTGGTTCCCGGTCCCCCAGCCCATCCGCCATCC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGATGGCGGATGGGCTaGGGGACCGGGAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGWRMG*GTGNQG
Trigger: TCCTTGGTTCCCGGTCCCCCAGCCCATCCGCCATCC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGCAGGGCCCGTGGTATaGGGAGGGTCCAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGAGPVV*GGSRTA
Trigger: AGCTGTCCTGGACCCTCCCCATACCACGGGCCCTGC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCCCCTTGCAGGGCCCGTaGTATGGGGAGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGPLQGP*YGEGPG
Trigger: TCCTGGACCCTCCCCATACCACGGGCCCTGCAAGGG...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCAATGGGCCACGGGCCTaGGATGCTCCGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGNGPRA*DAPRWA
Trigger: TGCCCACCTCGGAGCATCCCAGGCCCGTGGCCCATT...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGTGATACAGACCCCCTaGGAGGCCCGCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGVIQTP*EARPGP
Trigger: TGGACCTGGGCGGGCCTCCCAGGGGGTCTGTATCAC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCTCCGTGTTTGTCCACTaGCAGGGGCCGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGSVFVH*QGPAVW
Trigger: CCACACCGCCGGCCCCTGTCAGTGGACAAACACGGA...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR TCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCTTGTGGCCCTTGCTCTaGGAGCCCCTGCGTCCCACC +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGLWPLL*EPLRPT
Trigger: GGTGGGACGCAGGGGCTCTCAGAGCAAGGGCCACAA...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCCGAGGTTGCCGGTGCTaGTGGAGCTGCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGRGCRC*WSCSVQ
Trigger: CTGCACTGAGCAGCTCCAGCAGCACCGGCAACCTCG...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCCGAGGTTGCCGGTGCTaGTGGAGCTGCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGRGCRC*WSCSVQ
Trigger: CTGCACTGAGCAGCTCCAGCAGCACCGGCAACCTCG...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCCCGCGAGGTTGCCGGTaGTGCTGGAGCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGPRGCR*CWSCSV
Trigger: CACTGAGCAGCTCCAGCAGCACCGGCAACCTCGCGG...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGGGCCGGCGCCACCGATaGCCAGGTGCGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGGRRHR*PGASGW
Trigger: CCAACCTGACGCACCTGGGCATCGGTGGCGCCGGCC...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGAGAGGAGCCAGGTGTaGTCATTCCCTGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGERSQV*SFPGRR
Trigger: GCGCCGGCCAGGGAATGAGCACACCTGGCTCCTCTC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGACAGGGTGGGCGATaGCTGCTGACGCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGGQGGR*LLTPCL
Trigger: GAGGCAAGGCGTCAGCAGGCATCGCCCACCCTGTCC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCAGGGTGGAAGTGTGTTaGGGGGAGCTCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGRVEVC*GELPGE
Trigger: CTCCCCAGGGAGCTCCCCGCAACACACTTCCACCCT...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCCTGGCGTATCCCAGTTaGTGCGAGTCCGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGLAYPS*CESGRL
Trigger: GAGCCTGCCGGACTCGCAGCAACTGGGATACGCCAG...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGCTGGCGTATCCCAGTTaGTGCGAGTCCGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRLAYPS*CESGRL
Trigger: GAGCCTGCCGGACTCGCAGCAACTGGGATACGCCAG...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGTCCGCCGCCCTGCATaGTCTGTCCACTTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGVRRPA*SVHFAP
Trigger: AGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGAC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGCCAGCAGACCACGCTaGCCAAGAGAGGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGASRPR*PREGVW
Trigger: CCACACCCCCTCTCTTGGGCAGCGTGGTCTGCTGGC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGGGTGCCTGACCCCTaGCTGGCCAGGACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLGVPDP*LARTLE
Trigger: TTCCAGGGTCCTGGCCAGGCAGGGGTCAGGCACCCC...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCTCAGTGCAGGGAAGGTaGGCTCCTCGGGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGSVQGR*APRGPA
Trigger: CGCTGGACCCCGAGGAGCCCACCTTCCCTGCACTGA...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGTGTGCTCATTCCCTaGCCGGCGCCACCGATGCCC +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLGVLIP*PAPPMP
Trigger: GGGCATCGGTGGCGCCGGCCAGGGAATGAGCACACC...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCAGCTGGGCGGTGCTGTaGAGAGGAGCCAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGSWAVL*RGARCA
Trigger: AGCACACCTGGCTCCTCTCCACAGCACCGCCCAGCT...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGAAGGTGTCCTCGGTaGCTGGGTCGGCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGGRCPR*LGRPEP
Trigger: TGGTTCTGGCCGACCCAGCCACCGAGGACACCTTCC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGAAGGTGTCCTCGGTaGCTGGGTCGGCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGRCPR*LGRPEP
Trigger: TGGTTCTGGCCGACCCAGCCACCGAGGACACCTTCC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGGTGGCGGGCTGCTTTaGGGCGCATGGCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGGGGLL*GAWPPF
Trigger: AAATGGAGGCCATGCGCCCCAAAGCAGCCCGCCACC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCACTAGCAGGCACCTCTaGGAGAGGCTGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGTSRHL*ERLAGW
Trigger: CCAGCCTGCCAGCCTCTCCCAGAGGTGCCTGCTAGT...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGACTAGCAGGCACCTCTaGGAGAGGCTGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRTSRHL*ERLAGW
Trigger: CCAGCCTGCCAGCCTCTCCCAGAGGTGCCTGCTAGT...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCCCAGAGGACAAGCAGTaGCGCCCGCCGGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGPEDKQ*RPPEVG
Trigger: TCCAACCTCCGGCGGGCGCCACTGCTTGTCCTCTGG...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGCCAGTGGGGGTGGGTaGACACCTGTGCCACACGGA +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGASGGG*TPVPHG
Trigger: TCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGCACGGCAGGGCCAGTaGACTTTGGCTGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGARQGQ*TLAAKA
Trigger: GGCTTTGGCAGCCAAAGTCCACTGGCCCTGCCGTGC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTCCATGGCTACAGCCTaGGTGATGGGTGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGSMATA*VMGDSG
Trigger: CCCGCTGTCACCCATCACTCAGGCTGTAGCCATGGA...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
CDS-3UTR GCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCCGGCTGGGGCCCAGTTaGAGGTACTGGGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGRLGPS*RYWDFW
Trigger: CCAGAAATCCCAGTACCTGCAACTGGGCCCCAGCCG...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGCGGCTGGGGCCCAGTTaGAGGTACTGGGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRRLGPS*RYWDFW
Trigger: CCAGAAATCCCAGTACCTGCAACTGGGCCCCAGCCG...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGGGTCGTTGAGCATGTaGAGTCCGTCGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGGSLSM*SPSRVR
Trigger: CCTGACCCTCGACGGACTGCACATGCTCAACGACCC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGGTCGTTGAGCATGTaGAGTCCGTCGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGSLSM*SPSRVR
Trigger: CCTGACCCTCGACGGACTGCACATGCTCAACGACCC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGGGGTCCGCCGCCCTaGATGCTCTGTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLGGPPP*MLCPLC
Trigger: GCAAAGTGGACAGAGCATGCAGGGCGGCGGACCCCC...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGCCACGACCCTGAGCTaGCAAGAAGGGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLATTLS*QEGAAS
Trigger: GCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGC...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGGCCACGGGCCTGGGATaGTCCGAGGTGGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGATGLG*SEVGIP
Trigger: AGGGATGCCCACCTCGGAGCATCCCAGGCCCGTGGC...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCCCGAGGAGGGAGGACTaGTTGAGCCCAGGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGPRRED*LSPGVR
Trigger: TCGGACTCCTGGGCTCAAGCAGTCCTCCCTCCTCGG...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGTCTAGGGACGGGTCCTaGCAAGGCTGTTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRSRDGS*QGCSGL
Trigger: CAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGA...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCCGAGGCACTCACTCCTaGCCCACCCATGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLRGTHS*PTHALR
Trigger: CCTGAGGGCATGGGTGGGGCAGGAGTGAGTGCCTCG...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCAGGGACGGCCGAGTGTaGCCTGAGCCGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSRDGRV*PEPPAP
Trigger: GGGGGCAGGCGGCTCAGGGCACACTCGGCCGTCCCT...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGCCAGGTGCGTCAGGTTaGCCGCGAGGTTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGPGASG*PRGCRC
Trigger: GCACCGGCAACCTCGCGGCCAACCTGACGCACCTGG...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGTGTCCTCGGTGGCTaGGTCGGCCAGAACCATGTC +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGGVLGG*VGQNHV
Trigger: GACATGGTTCTGGCCGACCCAGCCACCGAGGACACC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTATCCCAGCCCAGCCCTaGGCGGGCGGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGIPAQP*AGGWVD
Trigger: GTCCACCCACCCGCCCGCCCAGGGCTGGGCTGGGAT...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGTTGCGCCTGCCCCGGTaGACGCCAGGGCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGLRLPR*TPGLCV
Trigger: CACACAGAGCCCTGGCGTCCACCGGGGCAGGCGCAA...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGTGAATCCTTCTaGAACACAGGGACGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGGRESF*NTGTPG
Trigger: GCCAGGCGTCCCTGTGTTCCAGAAGGATTCACGCCC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCTGTGGCCAGTGGGGGTaGGTGGACACCTGTGCCACA +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGCGQWG*VDTCAT
Trigger: TGTGGCACAGGTGTCCACCCACCCCCACTGGCCACA...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCAGGGCCAGTGGACTTTaGCTGCCAAAGCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGRASGL*LPKPSL
Trigger: GAGGGAGGGCTTTGGCAGCCAAAGTCCACTGGCCCT...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGGAGCTTGGCCCCCTaGAGAAATCAGGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGSLAP*RNQAKH
Trigger: GTGTTTGGCCTGATTTCTTCAGGGGGCCAAGCTCCC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGGGGCCCCTCGGCCTCTaGGACGGCTCCATCGGGACC +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGGPLGL*DGSIGT
Trigger: GGTCCCGATGGAGCCGTCTCAGAGGCCGAGGGGCCC...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGGGCACCACATGTGGGTaGCGGGCCAGGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGGTTCG*RARPRG
Trigger: GCCCCTGGGCCTGGCCCGTCACCCACATGTGGTGCC...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCGGCACCACATGTGGGTaGCGGGCCAGGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCGTTCG*RARPRG
Trigger: GCCCCTGGGCCTGGCCCGTCACCCACATGTGGTGCC...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGCCCCTGGTCCATGGTaGATGGGGGTAGAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGAPGPW*MGVERD
Trigger: GTCTCTTTCTACCCCCATTCACCATGGACCAGGGGC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGTGAGAGGTACATGGTaGCATAGGGGCAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGVRGTW*HRGSCR
Trigger: CCGACAGCTGCCCCTATGGCACCATGTACCTCTCAC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGTGAGAGGTACATGGTaGCATAGGGGCAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGVRGTW*HRGSCR
Trigger: CCGACAGCTGCCCCTATGGCACCATGTACCTCTCAC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCCGAGGTTGCCGGTGCTaGTGGAGCTGCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLRGCRC*WSCSVQ
Trigger: CTGCACTGAGCAGCTCCAGCAGCACCGGCAACCTCG...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCTGCCTGCTGACGCCTTaGCTCTGTGCTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGCLLTP*LCAQGQ
Trigger: CTGTCCCTGAGCACAGAGGCAAGGCGTCAGCAGGCA...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGTCGTTGAGCATGTaGAGTCCGTCGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGGSLSM*SPSRVR
Trigger: CCTGACCCTCGACGGACTGCACATGCTCAACGACCC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCCAAACAGTCGGAAAATaGGCCACGGCCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGQTVGK*ATAHSP
Trigger: AGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTG...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCCCAAGAGGTAACCCCTaGCTCCGCGTTCGACCCCTC +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLPRGNP*LRVRPL
Trigger: GAGGGGTCGAACGCGGAGGCAGGGGTTACCTCTTGG...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGTCTCCAAGTCCACCTaGCACGACCCTGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGVSKST*HDPELP
Trigger: TGGCAGCTCAGGGTCGTGGCAGGTGGACTTGGAGAC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGTGTTCAGGCCTGGGATaGTGGGCAGAAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRCSGLG*WAEVAH
Trigger: GTGAGCCACTTCTGCCCAGCATCCCAGGCCTGAACA...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGGCTGGGCAAGGGTTaGCCCCAAATTCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGLGKG*PQIPEH
Trigger: GTGTTCTGGAATTTGGGGGCAACCCTTGCCCAGCCC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTCGGACCGGCGGGTTTaGATATATCAGTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGSDRRV*IYQWGH
Trigger: GTGGCCCCACTGATATATGCAAACCCGCCGGTCCGA...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGACCTCACAGGACTTaGGCCTGGACCCCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGGPHRT*AWTPSS
Trigger: AGAAGACGGGGTCCAGGCCCAAGTCCTGTGAGGTCC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTTCCGGCAGGCTCCCGTaGCTGCCCGTGAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKASGRLP*LPVRPI
Trigger: GATGGGCCTCACGGGCAGCCACGGGAGCCTGCCGGA...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGCCTCCCCAGGCCTACTaGCCAAGTCCATGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRPPQAY*PSPWLS
Trigger: ACTTAGCCATGGACTTGGCCAGTAGGCCTGGGGAGG...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCACAGGCTGCTGGAGCTaGTGGCGTTCTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGTGCWS*WRSPSC
Trigger: ACATGATGGAGAACGCCATCAGCTCCAGCAGCCTGT...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR TCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGACACAGAGAGAGGCTaGACTTGGGCTACACCCTCT +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRDTERG*TWATPS
Trigger: AGAGGGTGTAGCCCAAGTTCAGCCTCTCTCTGTGTC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGTCAGGCCAAACACACTaGTGCCAACACTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRSGQTH*CQHSPP
Trigger: GGGAGGAGAGTGTTGGCATCAGTGTGTTTGGCCTGA...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGCGCTAGTGCGGTACTaGTGCAGAGCCGGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGALVRY*CRAGAE
Trigger: CTCGGCGCCGGCTCTGCAGCAGTACCGCACTAGCGC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCCAAACAGTCGGAAAATaGGCCACGGCCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGQTVGK*ATAHSP
Trigger: AGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTG...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGGTCCGCCGCCCTGCATaGTCTGTCCACTTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGVRRPA*SVHFAP
Trigger: AGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGAC...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCACCCAGCAGAGGGTCTaGAGAAGCCATGAGCACATG +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGTQQRV*RSHEHM
Trigger: CATGTGCTCATGGCTTCTGCAGACCCTCTGCTGGGT...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCCCAGGGGCACATCTGTaGCATCGGCTTTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLPGAHL*HRLCGP
Trigger: AGGGCCACAAAGCCGATGGCACAGATGTGCCCCTGG...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCCTGCCCCCGCCCGCTaGGGCCGCCCACAATCATGG +
Preference number: 4 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGPAPAR*GRPQSW
Trigger: CCATGATTGTGGGCGGCCGCAGCGGGCGGGGGCAGG...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGATGGGATTTCTGGAGCTaGAGCCGCGCGGCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGWDFWS*SRAARV
Trigger: GACGCGGGCCGCGCGGCTCCAGCTCCAGAAATCCCA...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGGCGGAGTCAGAATTaGTCCTTCTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGRSQN*SFSSWC
Trigger: ACACCAGCTGGAGAAGGACCAATTCTGACTCCGCCC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGGAGTCAGAATTaGTCCTTCTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGGRSQN*SFSSWC
Trigger: ACACCAGCTGGAGAAGGACCAATTCTGACTCCGCCC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCCCAGGTGCGTCAGGTTaGCCGCGAGGTTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFPGASG*PRGCRC
Trigger: GCACCGGCAACCTCGCGGCCAACCTGACGCACCTGG...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTTGAACTGCTCCAGCTaGTGGGACAGAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGLNCSS*WDRALA
Trigger: GGCCAATGCTCTGTCCCACCAGCTGGAGCAGTTCAA...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
CDS-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTCACAAGCTCGGCCGTTaGCGAGGGACGGAGCACGGC +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGHKLGR*RGTEHG
Trigger: GCCGTGCTCCGTCCCTCGCCAACGGCCGAGCTTGTG...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCGGGCTTCGCGGGAGGTaGACAACCGGGGGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGGLRGR*TTGGGL
Trigger: CAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCC...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGAGGGCTTCGAGGGGATaGAGACAGGGCGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGRASRG*RQGEEG
Trigger: ACCCTCCTCGCCCTGTCTCCATCCCCTCGAAGCCCT...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGGGCCCCACTGTCCCTaGCAAGCTCGGACCTCGGTC +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGGPHCP*QARTSV
Trigger: GACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGCAGGAGGGAGAGCCCTaGCTGAACTTCGCCGTAGGG +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGQEGEP*LNFAVG
Trigger: CCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTG...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGAGGGATGGATGGACATaGGGGGCCCTCCTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGRDGWT*GALLAR
Trigger: CCTAGCCAGGAGGGCCCCCCATGTCCATCCATCCCT...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGATGCTGGGCAGAAGTaGCTCACACCTGTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGDAGQK*LTPVAP
Trigger: TGGGGCTACAGGTGTGAGCCACTTCTGCCCAGCATC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCTCAGGCCTGGGATGCTaGGCAGAAGTGGCTCACACC +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLSGLGC*AEVAHT
Trigger: GGTGTGAGCCACTTCTGCCCAGCATCCCAGGCCTGA...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGGCCTGGCCAGGACCCTaGAAGGCCAAGGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGAWPGP*KAKGRR
Trigger: CCTGCGGCCCTTGGCCTTCCAGGGTCCTGGCCAGGC...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCGGCCGCCCACAATCATaGCCCACGGGACGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSGRPQS*PTGRPW
Trigger: CCACGGACGTCCCGTGGGCCATGATTGTGGGCGGCC...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTGGCCGCCCACAATCATaGCCCACGGGACGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGGRPQS*PTGRPW
Trigger: CCACGGACGTCCCGTGGGCCATGATTGTGGGCGGCC...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCACAGGCTGCTGGAGCTaGTGGCGTTCTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGTGCWS*WRSPSC
Trigger: ACATGATGGAGAACGCCATCAGCTCCAGCAGCCTGT...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR TCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTCACCTGCCACGACCCTaGGCTGCCAAGAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGHLPRP*AAKKGQ
Trigger: CTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTG...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGACCAAGCATCCGGGCCTaGCCAAGGACACAGACGGCG +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGPSIRA*PRTQTA
Trigger: CGCCGTCTGTGTCCTTGGTCAGGCCCGGATGCTTGG...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAGGCCGGCGCCACCGATaGCCAGGTGCGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPGRRHR*PGASGW
Trigger: CCAACCTGACGCACCTGGGCATCGGTGGCGCCGGCC...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCGCGCTAGTGCGGTACTaGTGCAGAGCCGGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCALVRY*CRAGAE
Trigger: CTCGGCGCCGGCTCTGCAGCAGTACCGCACTAGCGC...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCAGGTGGGTGGCGGGCTaGTTTGGGGCGCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCRWVAG*FGAHGL
Trigger: GAGGCCATGCGCCCCAAAGCAGCCCGCCACCCACCT...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGAGTGGCCACTTGGCTaGTCAGACACATGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGEWPLG*SDTCQR
Trigger: CCTTTGGCATGTGTCTGAGCAGCCAAGTGGCCACTC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGTGGTGAGAGGTACATaGTGCCATAGGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGVVRGT*CHRGSC
Trigger: ACAGCTGCCCCTATGGCACCATGTACCTCTCACCAC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGCGGAGTCAGAATTaGTCCTTCTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGGRSQN*SFSSWC
Trigger: ACACCAGCTGGAGAAGGACCAATTCTGACTCCGCCC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGATCCCAGCCCAGCCCTaGGCGGGCGGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMIPAQP*AGGWVD
Trigger: GTCCACCCACCCGCCCGCCCAGGGCTGGGCTGGGAT...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGGATGGCGGATGGGCTaGGGGACCGGGAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGGWRMG*GTGNQG
Trigger: TCCTTGGTTCCCGGTCCCCCAGCCCATCCGCCATCC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTGCTGGGGATGGCGGATaGGCTGGGGGACCGGGAACC +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGAGDGG*AGGPGT
Trigger: GGTTCCCGGTCCCCCAGCCCATCCGCCATCCCCAGC...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGCTGGGGATGGCGGATaGGCTGGGGGACCGGGAACC +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRAGDGG*AGGPGT
Trigger: GGTTCCCGGTCCCCCAGCCCATCCGCCATCCCCAGC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCCCCTTGCAGGGCCCGTaGTATGGGGAGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFPLQGP*YGEGPG
Trigger: TCCTGGACCCTCCCCATACCACGGGCCCTGCAAGGG...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTCCAGAGGACAAGCAGTaGCGCCCGCCGGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGPEDKQ*RPPEVG
Trigger: TCCAACCTCCGGCGGGCGCCACTGCTTGTCCTCTGG...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTCCCCGGGTACTCGCGTaGGCCCCACTGTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGPRVLA*APLSLA
Trigger: TGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGG...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCGAACACAGGGACGCCTaGCTGCTGGCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFEHRDA*LLAPGW
Trigger: CCAGCCAGGAGCCAGCAGCCAGGCGTCCCTGTGTTC...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGAACACAGGGACGCCTaGCTGCTGGCTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGEHRDA*LLAPGW
Trigger: CCAGCCAGGAGCCAGCAGCCAGGCGTCCCTGTGTTC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGGAGCACATGGGTGCGTaGGGAGAGCAGCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGEHMGA*GEQPLT
Trigger: GGTTAGAGGCTGCTCTCCCCACGCACCCATGTGCTC...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGTGGATACAGGCTCTaGAATCATCAGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGGGYRL*NHQSQH
Trigger: GTGCTGGCTCTGATGATTCCAGAGCCTGTATCCACC...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCCCTCCCCAGGCCTACTaGCCAAGTCCATGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLPPQAY*PSPWLS
Trigger: ACTTAGCCATGGACTTGGCCAGTAGGCCTGGGGAGG...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGCCTACCGTGAGCTCCTaGCAAGGCCCTGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGPTVSS*QGPAQP
Trigger: AGGCTGGGCAGGGCCTTGTCAGGAGCTCACGGTAGG...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCCACCTCTGCCTACCGTaGGCTCCTGACAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFHLCLP*APDKAL
Trigger: CAGGGCCTTGTCAGGAGCTCACGGTAGGCAGAGGTG...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCTGGACGGATGGGGTATaGGGTTTCCTAGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLWTDGV*GFLAWS
Trigger: GGACCATGCTAGGAAACCTCATACCCCATCCGTCCA...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGGCCTCCCAGGGTGAGTaGGGGGCCGAGTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMASQGE*GAESCP
Trigger: GGGGCAAGACTCGGCCCCTCACTCACCCTGGGAGGC...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCTGGCTCAGGTGGAGCTaGCGGGAGAATGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSWLRWS*RENVPG
Trigger: CCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCA...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAAGGGTGGAAGTGTGTTaGGGGGAGCTCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGRVEVC*GELPGE
Trigger: CTCCCCAGGGAGCTCCCCGCAACACACTTCCACCCT...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGCAAACAGTCGGAAAATaGGCCACGGCCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGQTVGK*ATAHSP
Trigger: AGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTG...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGCCACGGGCCTGGGATaGTCCGAGGTGGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRATGLG*SEVGIP
Trigger: AGGGATGCCCACCTCGGAGCATCCCAGGCCCGTGGC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTCGGAAGAGTATGGGGTaGCTGACCCCTGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKARKSMG*LTPAWP
Trigger: TGGCCAGGCAGGGGTCAGGCACCCCATACTCTTCCG...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAGGTGTGCTCATTCCCTaGCCGGCGCCACCGATGCCC +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPGVLIP*PAPPMP
Trigger: GGGCATCGGTGGCGCCGGCCAGGGAATGAGCACACC...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCTTGAACTGCTCCAGCTaGTGGGACAGAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLLNCSS*WDRALA
Trigger: GGCCAATGCTCTGTCCCACCAGCTGGAGCAGTTCAA...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTTCGCGGCCTCGCGATTaGGCTTCGCGGGAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGSRPRD*ASREVD
Trigger: GTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCACAATGAAACTCCCCTaGCCACCTCTGCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGTMKLP*PPLPVP
Trigger: AGGTACAGGCAGAGGTGGCCAGGGGAGTTTCATTGT...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGAGTCCCCCACACTCTTaGGGCAGAGAGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGSPPHS*GREVSA
Trigger: AGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACT...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGGCAGGGCCCGTGGTATaGGGAGGGTCCAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGAGPVV*GGSRTA
Trigger: AGCTGTCCTGGACCCTCCCCATACCACGGGCCCTGC...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCCGGAGGTTGGACGGATaGGGTATGAGGTTTCCTAGC +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLRRLDG*GMRFPS
Trigger: GCTAGGAAACCTCATACCCCATCCGTCCAACCTCCG...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGTGGGATGCTCCGAGGTaGGCATCCCTCCTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGWDAPR*ASLLSY
Trigger: ATAGGAGAGGAGGGATGCCCACCTCGGAGCATCCCA...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTCGCAACCTCCCCACGTaGGCCTGCCCCTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGRNLPT*ACPSGS
Trigger: GCTTCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCG...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGTCGGAGGGCTCCTTaGAAATACAGAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGRRAP*KYRKLR
Trigger: CCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTTGCCTGACCCCTGCCTaGCCAGGACCCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGCLTPA*PGPWKA
Trigger: GGCCTTCCAGGGTCCTGGCCAGGCAGGGGTCAGGCA...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGCCCACGGGACGTCCGTaGCAGAGTATACATGCTAGG +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGPTGRP*QSIHAR
Trigger: CCTAGCATGTATACTCTGCCACGGACGTCCCGTGGG...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAAGCCCTGCCAGAGGATaGGGCAGGGACGGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPSPARG*GRDGRV
Trigger: CACTCGGCCGTCCCTGCCCCATCCTCTGGCAGGGCT...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCAGGTACTGGGATTTCTaGAGCTGGAGCATCAACAGC +
Preference number: 4 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGRYWDF*SWSINS
Trigger: GCTGTTGATGCTCCAGCTCCAGAAATCCCAGTACCT...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594658.5
CDS-3UTR TCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCATCCGTGTTTGTCCACTaGCAGGGGCCGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPSVFVH*QGPAVW
Trigger: CCACACCGCCGGCCCCTGTCAGTGGACAAACACGGA...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGTGGGCGATGCCTGCTaGCGCCTTGCCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRVGDAC*RLASVL
Trigger: GAGCACAGAGGCAAGGCGTCAGCAGGCATCGCCCAC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR TCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTTCCATGGCTACAGCCTaGGTGATGGGTGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKASMATA*VMGDSG
Trigger: CCCGCTGTCACCCATCACTCAGGCTGTAGCCATGGA...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGACAGGCTGCTGGAGCTaGTGGCGTTCTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGTGCWS*WRSPSC
Trigger: ACATGATGGAGAACGCCATCAGCTCCAGCAGCCTGT...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTTGGGCCTGCCTGCGGTaGGGCAGGGCTTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPWACLR*GRASRG
Trigger: TCCCCTCGAAGCCCTGCCTCACCGCAGGCAGGCCCA...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTCCTACCGTGAGCTCCTaGCAAGGCCCTGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGPTVSS*QGPAQP
Trigger: AGGCTGGGCAGGGCCTTGTCAGGAGCTCACGGTAGG...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCCACCTGCCACGACCCTaGGCTGCCAAGAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRHLPRP*AAKKGQ
Trigger: CTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTG...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGGGAGCCTTCTCCTATaGGTGGCCACTTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAGSLLL*VATWLL
Trigger: GAGCAGCCAAGTGGCCACTCATAGGAGAAGGCTCCC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCGCAGCAGGAGCAACGTaGCCAGGGAGCCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSAAGAT*PGSLLL
Trigger: TAGGAGAAGGCTCCCTGGTCACGTTGCTCCTGCTGC...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCGGGCAGCTGTCGGCCTaGCGTCCGTGTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCGQLSA*RPCLST
Trigger: AGTGGACAAACACGGACGGCAGGCCGACAGCTGCCC...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCCCGCGAGGTTGCCGGTaGTGCTGGAGCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRPRGCR*CWSCSV
Trigger: CACTGAGCAGCTCCAGCAGCACCGGCAACCTCGCGG...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGAGAGGAGCCAGGTGTaGTCATTCCCTGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRERSQV*SFPGRR
Trigger: GCGCCGGCCAGGGAATGAGCACACCTGGCTCCTCTC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAACGCCAGCTGGGCGGTaGTGTGGAGAGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPTPAGR*CGEEPG
Trigger: ACCTGGCTCCTCTCCACAGCACCGCCCAGCTGGCGT...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCACGCCAGCTGGGCGGTaGTGTGGAGAGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRTPAGR*CGEEPG
Trigger: ACCTGGCTCCTCTCCACAGCACCGCCCAGCTGGCGT...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGGACAGGGTGGGCGATaGCTGCTGACGCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRGQGGR*LLTPCL
Trigger: GAGGCAAGGCGTCAGCAGGCATCGCCCACCCTGTCC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCGGGTCGTTGAGCATGTaGAGTCCGTCGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFGSLSM*SPSRVR
Trigger: CCTGACCCTCGACGGACTGCACATGCTCAACGACCC...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGTGTCCACTTTGCGCCTaGCCCGGTGGACGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMCPLCA*PGGRQG
Trigger: GCCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACA...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAACCGATGGGCCTGCCTaGGGTGAGGCAGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPTDGPA*GEAGLR
Trigger: TCGAAGCCCTGCCTCACCGCAGGCAGGCCCATCGGT...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTCCCCTGGCCACCTCTaGCTGTACCTTAAATTAACA +
Preference number: 4 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGSPGHL*LYLKLT
Trigger: TGTTAATTTAAGGTACAGGCAGAGGTGGCCAGGGGA...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCGGGACCCTCGCTCCCTaGCAGTCCCCCACACTCTTG +
Preference number: 4 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGGTLAP*QSPTLL
Trigger: CAAGAGTGTGGGGGACTGGCAGGGAGCGAGGGTCCC...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGTCTCCAAGTCCACCTaGCACGACCCTGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGVSKST*HDPELP
Trigger: TGGCAGCTCAGGGTCGTGGCAGGTGGACTTGGAGAC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGACAGGGACGCCTGGCTaGTGGCTCCTGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQETGTPG*WLLAGP
Trigger: GGGCCCAGCCAGGAGCCAGCAGCCAGGCGTCCCTGT...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACACAGGGACGCCTGGCTaGTGGCTCCTGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: MLSGGRALAELRRRGPMYTGTPG*WLLAGP
Trigger: GGGCCCAGCCAGGAGCCAGCAGCCAGGCGTCCCTGT...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGAAGGTGGGGACGCCATaGTCTCAGGAGGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGKVGTP*SQEGEP
Trigger: GGGCTCTCCCTCCTGAGAGCATGGCGTCCCCACCTT...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCGCTACACCCTCTGCCTaGAAGACTTGCCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSATPSA*KTCHPG
Trigger: CCCAGGGTGGCAAGTCTTGCAGGCAGAGGGTGTAGC...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGAGGCACTCACTCCTaGCCCACCCATGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPRGTHS*PTHALR
Trigger: CCTGAGGGCATGGGTGGGGCAGGAGTGAGTGCCTCG...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTCCAGTGGACTTTGGCTaGCAAAGCCCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAPVDFG*QSPPSP
Trigger: TGGGGAGGGAGGGCTTTGGCAGCCAAAGTCCACTGG...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTCCAGTGGACTTTGGCTaGCAAAGCCCTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGPVDFG*QSPPSP
Trigger: TGGGGAGGGAGGGCTTTGGCAGCCAAAGTCCACTGG...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTTCCGGCAGGCTCCCGTaGCTGCCCGTGAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPSGRLP*LPVRPI
Trigger: GATGGGCCTCACGGGCAGCCACGGGAGCCTGCCGGA...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCACTTCCCGGCAAAGGTaGCCACCGATGGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCTSRQR*PPMGLP
Trigger: AGGCAGGCCCATCGGTGGCCACCTTTGCCGGGAAGT...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTCGGAAGTCTGTTCTGTaGCCCTGGCAGAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGRKSVL*PWQRHL
Trigger: GAGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCG...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGACGGAAGTCTGTTCTGTaGCCCTGGCAGAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGRKSVL*PWQRHL
Trigger: GAGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCG...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTTCTCAGGGAGGACCGTaGTCCTCGTCTCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGSQGGP*SSSRGP
Trigger: GGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGA...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAAATGGGCCACGGGCCTaGGATGCTCCGAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPNGPRA*DAPRWA
Trigger: TGCCCACCTCGGAGCATCCCAGGCCCGTGGCCCATT...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTCTGCTGGCTCCTGGCTaGGCCCCGGGTACTCGCGTG +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPLLAPG*APGTRV
Trigger: CACGCGAGTACCCGGGGCCCAGCCAGGAGCCAGCAG...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGGCGAAACAGGAAGGTaGGGACGCCATGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGGETGR*GRHALR
Trigger: CCTGAGAGCATGGCGTCCCCACCTTCCTGTTTCGCC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGTAGCCCCAGAACTTTaGGAGGCCGAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGVAPEL*EAEEGG
Trigger: TCCTCCCTCCTCGGCCTCCCAAAGTTCTGGGGCTAC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGATCAGGCCTGGGATGCTaGGCAGAAGTGGCTCACACC +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGSGLGC*AEVAHT
Trigger: GGTGTGAGCCACTTCTGCCCAGCATCCCAGGCCTGA...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCTGTGGCCAGTGGGGGTaGGTGGACACCTGTGCCACA +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCCGQWG*VDTCAT
Trigger: TGTGGCACAGGTGTCCACCCACCCCCACTGGCCACA...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGCAGAACACTTCGAGATaGGGGCCATCCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGQNTSR*GPSPDP
Trigger: GGGGTCGGGGGATGGCCCCCATCTCGAAGTGTTCTG...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGAGCCCTGCCAGAGGATaGGGCAGGGACGGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMSPARG*GRDGRV
Trigger: CACTCGGCCGTCCCTGCCCCATCCTCTGGCAGGGCT...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCCACCTCTGCCTACCGTaGGCTCCTGACAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRHLCLP*APDKAL
Trigger: CAGGGCCTTGTCAGGAGCTCACGGTAGGCAGAGGTG...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAAGGGTGGAGAGGGGATaGAATGCCAGTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGRVERG*NASSTQ
Trigger: CTGGGTGGAACTGGCATTTCATCCCCTCTCCACCCT...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGCTGGCTTCAGGATGCTaGAAATGGGCCACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGLASGC*KWATGL
Trigger: CAGGCCCGTGGCCCATTTTCAGCATCCTGAAGCCAG...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAACACACAAAAGGCCGTaGTACAGACCCCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGTHKRP*YRPPGR
Trigger: CCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGT...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGTTTTCAGGGCGAGGTaGCAGAGGACCCCCGAATAC +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGVFRAR*QRTPEY
Trigger: GTATTCGGGGGTCCTCTGTCACCTCGCCCTGAAAAC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCAGAGACAGGAGCCGCTaGCAGGGCCTCCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGRDRSR*QGLPQK
Trigger: TTTCTGGGGGAGGCCCTGGCAGCGGCTCCTGTCTCT...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338797.10
CDS-3UTR GCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGTGAGAGGTACATGGTaGCATAGGGGCAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGVRGTW*HRGSCR
Trigger: CCGACAGCTGCCCCTATGGCACCATGTACCTCTCAC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACTGGCGTATCCCAGTTaGTGCGAGTCCGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPLAYPS*CESGRL
Trigger: GAGCCTGCCGGACTCGCAGCAACTGGGATACGCCAG...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCCAAGAGGTAACCCCTaGCTCCGCGTTCGACCCCTC +
Preference number: 4 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGPRGNP*LRVRPL
Trigger: GAGGGGTCGAACGCGGAGGCAGGGGTTACCTCTTGG...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCTCCCCTGGCCACCTCTaGCTGTACCTTAAATTAACA +
Preference number: 4 (lower is better)
Translates to: SRPRDWASREVDNRGRAGSPGHL*LYLKLT
Trigger: TGTTAATTTAAGGTACAGGCAGAGGTGGCCAGGGGA...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGACCCCCAAATCACATaGCGCAAGAGCCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKADPQIT*RKSPQE
Trigger: TTCCTGGGGGCTCTTGCGGCATGTGATTTGGGGGTC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTTGGGATTTCTGGAGCTaGAGCCGCGCGGCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPWDFWS*SRAARV
Trigger: GACGCGGGCCGCGCGGCTCCAGCTCCAGAAATCCCA...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTAGCTGGGCGGTGCTGTaGAGAGGAGCCAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGSWAVL*RGARCA
Trigger: AGCACACCTGGCTCCTCTCCACAGCACCGCCCAGCT...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCAGCTGGGCGGTGCTGTaGAGAGGAGCCAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRSWAVL*RGARCA
Trigger: AGCACACCTGGCTCCTCTCCACAGCACCGCCCAGCT...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCGGTGTCCTCGGTGGCTaGGTCGGCCAGAACCATGTC +
Preference number: 4 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGGVLGG*VGQNHV
Trigger: GACATGGTTCTGGCCGACCCAGCCACCGAGGACACC...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGGAAGGTGTCCTCGGTaGCTGGGTCGGCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRGRCPR*LGRPEP
Trigger: TGGTTCTGGCCGACCCAGCCACCGAGGACACCTTCC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGGGATGGCGGATGGGCTaGGGGACCGGGAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMGWRMG*GTGNQG
Trigger: TCCTTGGTTCCCGGTCCCCCAGCCCATCCGCCATCC...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTCTTCTTACACTCAGGTaGGTGGCGGGCTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKALLTLR*VAGCFG
Trigger: CCCAAAGCAGCCCGCCACCCACCTGAGTGTAAGAAG...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCACCTCTGGGAGAGGCTaGCAGGCTGGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFTSGRG*QAGSLR
Trigger: TCTCAAAGACCCAGCCTGCCAGCCTCTCCCAGAGGT...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCAGTCCCCCACACTCTTaGGGCAGAGAGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFSPPHS*GREVSA
Trigger: AGCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACT...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGGGGCCCCACTGTCCCTaGCAAGCTCGGACCTCGGTC +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEGPHCP*QARTSV
Trigger: GACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCC...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCGATGCTGGGCAGAAGTaGCTCACACCTGTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFDAGQK*LTPVAP
Trigger: TGGGGCTACAGGTGTGAGCCACTTCTGCCCAGCATC...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCACCCCCGAATACCGCTaGACCTTACTCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSTPEYR*TLLHQP
Trigger: AGGCTGGTGGAGTAAGGTCCAGCGGTATTCGGGGGT...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAACCCCCGAATACCGCTaGACCTTACTCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGTPEYR*TLLHQP
Trigger: AGGCTGGTGGAGTAAGGTCCAGCGGTATTCGGGGGT...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGCAGGAGCCCAGAAGGTaGATACAGGCTCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: SAALHALSTLRLPRWTPGQEPRR*IQALES
Trigger: TGATTCCAGAGCCTGTATCCACCTTCTGGGCTCCTG...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCTGGACGGATGGGGTATaGGGTTTCCTAGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFWTDGV*GFLAWS
Trigger: GGACCATGCTAGGAAACCTCATACCCCATCCGTCCA...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCGTTTTCAGGGCGAGGTaGCAGAGGACCCCCGAATAC +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCVFRAR*QRTPEY
Trigger: GTATTCGGGGGTCCTCTGTCACCTCGCCCTGAAAAC...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGTTGTGGCCCTTGCTCTaGGAGCCCCTGCGTCCCACC +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQELWPLL*EPLRPT
Trigger: GGTGGGACGCAGGGGCTCTCAGAGCAAGGGCCACAA...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCTGGCTCAGGTGGAGCTaGCGGGAGAATGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPWLRWS*RENVPG
Trigger: CCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCA...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCGAGATCAGAAGTTCTTaGTGGCTGGGCTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFEIRSS*WLGWAR
Trigger: CCTTGCCCAGCCCAGCCATCAAGAACTTCTGATCTC...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGGAGAGGAGCCAGGTGTaGTCATTCCCTGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEERSQV*SFPGRR
Trigger: GCGCCGGCCAGGGAATGAGCACACCTGGCTCCTCTC...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCTGCCTGCTGACGCCTTaGCTCTGTGCTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRCLLTP*LCAQGQ
Trigger: CTGTCCCTGAGCACAGAGGCAAGGCGTCAGCAGGCA...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR GCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTACCCAGCAGAGGGTCTaGAGAAGCCATGAGCACATG +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGTQQRV*RSHEHM
Trigger: CATGTGCTCATGGCTTCTGCAGACCCTCTGCTGGGT...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCGAAGGTGATGGGAGCTaGTGTTTTCAGGGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSEGDGS*CFQGEV
Trigger: CACCTCGCCCTGAAAACAGCAGCTCCCATCACCTTC...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTCCAGGGGCACATCTGTaGCATCGGCTTTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGPGAHL*HRLCGP
Trigger: AGGGCCACAAAGCCGATGGCACAGATGTGCCCCTGG...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCGTGGGTGGACACCTGTaGCACACGGAAGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCVGGHL*HTEEYG
Trigger: CCCATACTCTTCCGTGTGGCACAGGTGTCCACCCAC...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTACTTACTCCACCTCCTaGTCCCAGGGGGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKATYSTS*SQGENG
Trigger: ACCATTCTCCCCCTGGGAGCAGGAGGTGGAGTAAGT...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGCCTGCCCCCGCCCGCTaGGGCCGCCCACAATCATGG +
Preference number: 4 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLPAPAR*GRPQSW
Trigger: CCATGATTGTGGGCGGCCGCAGCGGGCGGGGGCAGG...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAAGGGACGGCCGAGTGTaGCCTGAGCCGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVARDGRV*PEPPAP
Trigger: GGGGGCAGGCGGCTCAGGGCACACTCGGCCGTCCCT...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGTCAGTGCAGGGAAGGTaGGCTCCTCGGGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQESVQGR*APRGPA
Trigger: CGCTGGACCCCGAGGAGCCCACCTTCCCTGCACTGA...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGCACGGCCCACAGCCCTaGCGGACCATGCGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLHGPQP*RTMRAP
Trigger: AGGGGCGCGCATGGTCCGCCAGGGCTGTGGGCCGTG...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAGAGCACATGGGTGCGTaGGGAGAGCAGCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPEHMGA*GEQPLT
Trigger: GGTTAGAGGCTGCTCTCCCCACGCACCCATGTGCTC...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTCAAGACTTGCCACCCTaGGTAGTGACGTCGGCGAAA +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAQDLPP*VVTSAK
Trigger: TTTCGCCGACGTCACTACCCAGGGTGGCAAGTCTTG...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCAGGGATGGATGGACATaGGGGGCCCTCCTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPRDGWT*GALLAR
Trigger: CCTAGCCAGGAGGGCCCCCCATGTCCATCCATCCCT...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGGCCAGTGGGGGTGGGTaGACACCTGTGCCACACGGA +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEASGGG*TPVPHG
Trigger: TCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGC...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTGTTTGCATATATCAGTaGGGCCACCCAGCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGVCIYQ*GHPAPR
Trigger: CCTAGGGGCTGGGTGGCCCCACTGATATATGCAAAC...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGGGTGTCCGCGGGTGGTaGGAGGTACATGGTGCCATA +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMGVRGW*EVHGAI
Trigger: TATGGCACCATGTACCTCTCACCACCCGCGGACACC...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCAGGGTGGAGAGGGGATaGAATGCCAGTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGRVERG*NASSTQ
Trigger: CTGGGTGGAACTGGCATTTCATCCCCTCTCCACCCT...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAGGGAGCTTGGCCCCCTaGAGAAATCAGGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPGSLAP*RNQAKH
Trigger: GTGTTTGGCCTGATTTCTTCAGGGGGCCAAGCTCCC...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTCGAGGTTGCCGGTGCTaGTGGAGCTGCTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPRGCRC*WSCSVQ
Trigger: CTGCACTGAGCAGCTCCAGCAGCACCGGCAACCTCG...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGTGCCTGCTGACGCCTTaGCTCTGTGCTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMCLLTP*LCAQGQ
Trigger: CTGTCCCTGAGCACAGAGGCAAGGCGTCAGCAGGCA...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGATGCTCTGTCCACTTTaGGCCTGCCCCGGTGGACGC +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEMLCPL*ACPGGR
Trigger: GCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCAT...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTACATGCCAAAGGCATTaGCGGGCAAAGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGTCQRH*RAKRGR
Trigger: CCTTCCTCTCTTTGCCCGGCAATGCCTTTGGCATGT...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCTGTTCAGGCCTGGGATaGTGGGCAGAAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRCSGLG*WAEVAH
Trigger: GTGAGCCACTTCTGCCCAGCATCCCAGGCCTGAACA...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCTCTAGGGACGGGTCCTaGCAAGGCTGTTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPSRDGS*QGCSGL
Trigger: CAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGA...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAGACCCCCAAATCACATaGCGCAAGAGCCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPDPQIT*RKSPQE
Trigger: TTCCTGGGGGCTCTTGCGGCATGTGATTTGGGGGTC...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCAGTGGGTGGACACCTGTaGCACACGGAAGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPVGGHL*HTEEYG
Trigger: CCCATACTCTTCCGTGTGGCACAGGTGTCCACCCAC...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCATGCGGCGGTGGCTGCTaGGAGCCCGCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVACGGGC*EPAWVK
Trigger: CTTCACCCAGGCGGGCTCCCAGCAGCCACCGCCGCA...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTGCGGCGGTGGCTGCTaGGAGCCCGCCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRCGGGC*EPAWVK
Trigger: CTTCACCCAGGCGGGCTCCCAGCAGCCACCGCCGCA...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACGGTGTCCTCGGTGGCTaGGTCGGCCAGAACCATGTC +
Preference number: 4 (lower is better)
Translates to: MLSGGRALAELRRRGPMYGVLGG*VGQNHV
Trigger: GACATGGTTCTGGCCGACCCAGCCACCGAGGACACC...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTGGAAGGTGTCCTCGGTaGCTGGGTCGGCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPGRCPR*LGRPEP
Trigger: TGGTTCTGGCCGACCCAGCCACCGAGGACACCTTCC...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGGCTGGGGATGGCGGATaGGCTGGGGGACCGGGAACC +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQAGDGG*AGGPGT
Trigger: GGTTCCCGGTCCCCCAGCCCATCCGCCATCCCCAGC...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTAGGGCTTCGAGGGGATaGAGACAGGGCGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPRASRG*RQGEEG
Trigger: ACCCTCCTCGCCCTGTCTCCATCCCCTCGAAGCCCT...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTACAATGAAACTCCCCTaGCCACCTCTGCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGTMKLP*PPLPVP
Trigger: AGGTACAGGCAGAGGTGGCCAGGGGAGTTTCATTGT...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTTTACACTCAGGTGGGTaGCGGGCTGCTTTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPLHSGG*RAALGR
Trigger: GCGCCCCAAAGCAGCCCGCCACCCACCTGAGTGTAA...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACTTACACTCAGGTGGGTaGCGGGCTGCTTTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: MLSGGRALAELRRRGPMYLHSGG*RAALGR
Trigger: GCGCCCCAAAGCAGCCCGCCACCCACCTGAGTGTAA...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCATCTGTTCTGTGGCCCTaGCAGAGGCACCTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPSVLWP*QRHLCL
Trigger: TAGGCAGAGGTGCCTCTGCCAGGGCCACAGAACAGA...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGAGAGGCTGGCAGGCTaGGTCTTTGAGAGACCCTCA +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRERLAG*VFERPS
Trigger: TGAGGGTCTCTCAAAGACCCAGCCTGCCAGCCTCTC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTGAGAGGCTGGCAGGCTaGGTCTTTGAGAGACCCTCA +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGERLAG*VFERPS
Trigger: TGAGGGTCTCTCAAAGACCCAGCCTGCCAGCCTCTC...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCACCTCTGGGAGAGGCTaGCAGGCTGGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRTSGRG*QAGSLR
Trigger: TCTCAAAGACCCAGCCTGCCAGCCTCTCCCAGAGGT...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGGTCTCAGCTGCCACTaGTCATGGCATCTTCACACA +
Preference number: 4 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAGLSCH*SWHLHT
Trigger: TGTGTGAAGATGCCATGACCAGTGGCAGCTGAGACC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCCGGAGGTTGGACGGATaGGGTATGAGGTTTCCTAGC +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCRRLDG*GMRFPS
Trigger: GCTAGGAAACCTCATACCCCATCCGTCCAACCTCCG...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGCCCCGGGTACTCGCGTaGGCCCCACTGTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLPRVLA*APLSLA
Trigger: TGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGG...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGTCGCAGCCCGAGTTTaGAAGGATGTTTGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLVAARV*KDVWLK
Trigger: TTTTAACCAAACATCCTTCCAAACTCGGGCTGCGAC...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACCAGAACACTTCGAGATaGGGGCCATCCCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: MLSGGRALAELRRRGPMYQNTSR*GPSPDP
Trigger: GGGGTCGGGGGATGGCCCCCATCTCGAAGTGTTCTG...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCACAGGCTGCTGGAGCTaGTGGCGTTCTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRTGCWS*WRSPSC
Trigger: ACATGATGGAGAACGCCATCAGCTCCAGCAGCCTGT...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR TCA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTAAGAGAAAGGGACCTTaGCCTGGACAGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGKRKGP*PGQTNS
Trigger: ACTGTTGGTCTGTCCAGGTCAAGGTCCCTTTCTCTT...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACGGTCCAGGAGGGGCGTaGATCCTTCTGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: MLSGGRALAELRRRGPMYGPGGA*ILLEHR
Trigger: CCTGTGTTCCAGAAGGATTCACGCCCCTCCTGGACC...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCGCCCCTGGTCCATGGTaGATGGGGGTAGAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPAPGPW*MGVERD
Trigger: GTCTCTTTCTACCCCCATTCACCATGGACCAGGGGC...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGAGATCAGAAGTTCTTaGTGGCTGGGCTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMREIRSS*WLGWAR
Trigger: CCTTGCCCAGCCCAGCCATCAAGAACTTCTGATCTC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAAGGTGGGTGGCGGGCTaGTTTGGGGCGCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVARWVAG*FGAHGL
Trigger: GAGGCCATGCGCCCCAAAGCAGCCCGCCACCCACCT...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCCAGAGAGGTCTCAGCTaGCACTGGTCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCQRGLS*HWSWHL
Trigger: AAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTG...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGGGAGAGGGGATGAAATaGCAGTTCCACCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGGEGMK*QFHPGS
Trigger: AGAACCTGGGTGGAACTGGCATTTCATCCCCTCTCC...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTGAGTGGCCACTTGGCTaGTCAGACACATGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGEWPLG*SDTCQR
Trigger: CCTTTGGCATGTGTCTGAGCAGCCAAGTGGCCACTC...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCTCGGACCGGCGGGTTTaGATATATCAGTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPSDRRV*IYQWGH
Trigger: GTGGCCCCACTGATATATGCAAACCCGCCGGTCCGA...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGTGGTGAGAGGTACATaGTGCCATAGGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRVVRGT*CHRGSC
Trigger: ACAGCTGCCCCTATGGCACCATGTACCTCTCACCAC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCGGGCTTCGCGGGAGGTaGACAACCGGGGGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSGLRGR*TTGGGL
Trigger: CAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCC...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGTCGCGGCCTCGCGATTaGGCTTCGCGGGAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQSRPRD*ASREVD
Trigger: GTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCCACGGCCCACAGCCCTaGCGGACCATGCGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSHGPQP*RTMRAP
Trigger: AGGGGCGCGCATGGTCCGCCAGGGCTGTGGGCCGTG...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGAAAGGGACCTTGACCTaGACAGACCAACAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGKGTLT*TDQQCP
Trigger: GGGACACTGTTGGTCTGTCCAGGTCAAGGTCCCTTT...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACGGCGAAACAGGAAGGTaGGGACGCCATGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: MLSGGRALAELRRRGPMYGETGR*GRHALR
Trigger: CCTGAGAGCATGGCGTCCCCACCTTCCTGTTTCGCC...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGGTAGCCCCAGAACTTTaGGAGGCCGAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEVAPEL*EAEEGG
Trigger: TCCTCCCTCCTCGGCCTCCCAAAGTTCTGGGGCTAC...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGCCAGGGCACCACATGTaGGTGACGGGCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRPGHHM*VTGQAQ
Trigger: CTGGGCCTGGCCCGTCACCCACATGTGGTGCCCTGG...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCTACTGGCCAAGTCCATaGCTAAGTCCCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRYWPSP*LSPLLV
Trigger: CACCAGGAGGGGACTTAGCCATGGACTTGGCCAGTA...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAGGGGGAGAGCCAGCCTaGGCACAGAGGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAGGEPA*AQRSTG
Trigger: GCCTGTGCTCCTCTGTGCCCAGGCTGGCTCTCCCCC...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGGGGGGAGAGCCAGCCTaGGCACAGAGGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRGGEPA*AQRSTG
Trigger: GCCTGTGCTCCTCTGTGCCCAGGCTGGCTCTCCCCC...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 72 bp GAAGACCAGAGGACAAGCAGTGGCGCCCGCCGGAGGTaGGACGGATGGGGTATGAGGTTTCCTAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: EDQRTSSGARRR*DGWGMRFPSMV
Trigger: GACCATGCTAGGAAACCTCATACCCCATCCGTCCAACCTCCGGCGGGCGCCACTGCTTGTCCTCTGGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGTCCGTGTTTGTCCACTaGCAGGGGCCGGCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLSVFVH*QGPAVW
Trigger: CCACACCGCCGGCCCCTGTCAGTGGACAAACACGGA...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCTGGGCCTGCCTGCGGTaGGGCAGGGCTTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSWACLR*GRASRG
Trigger: TCCCCTCGAAGCCCTGCCTCACCGCAGGCAGGCCCA...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTGGCAGGCTGGGTCTTTaGGAGACCCTCAATAAAAGC +
Preference number: 4 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGGRLGL*ETLNKS
Trigger: GCTTTTATTGAGGGTCTCTCAAAGACCCAGCCTGCC...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp CCAAGTCCACCTGCCACGACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACTCAATGCCTTCTTTTaGAAACCGCATCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PSPPATTLSCQEGAASRPLNAFF*KPHPGG
Trigger: CCCGCCTGGATGCGGTTTTCAAAAGAAGGCATTGAG...TGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGCAGGTGGACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGCCAAGCATCCGGGCCTaGCCAAGGACACAGACGGCG +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRPSIRA*PRTQTA
Trigger: CGCCGTCTGTGTCCTTGGTCAGGCCCGGATGCTTGG...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGGACACAGAGAGAGGCTaGACTTGGGCTACACCCTCT +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMDTERG*TWATPS
Trigger: AGAGGGTGTAGCCCAAGTTCAGCCTCTCTCTGTGTC...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCTCAGGCCAAACACACTaGTGCCAACACTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPSGQTH*CQHSPP
Trigger: GGGAGGAGAGTGTTGGCATCAGTGTGTTTGGCCTGA...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGAGAGTATGGGGTGCCTaGCCCCTGCCTGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRRVWGA*PLPGQD
Trigger: GTCCTGGCCAGGCAGGGGTCAGGCACCCCATACTCT...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACGTGAGAGGTACATGGTaGCATAGGGGCAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: MLSGGRALAELRRRGPMYVRGTW*HRGSCR
Trigger: CCGACAGCTGCCCCTATGGCACCATGTACCTCTCAC...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAGGACAGGGTGGGCGATaGCTGCTGACGCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAGQGGR*LLTPCL
Trigger: GAGGCAAGGCGTCAGCAGGCATCGCCCACCCTGTCC...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGACCGATGGGCCTGCCTaGGGTGAGGCAGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRTDGPA*GEAGLR
Trigger: TCGAAGCCCTGCCTCACCGCAGGCAGGCCCATCGGT...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGGGGACCCTCGCTCCCTaGCAGTCCCCCACACTCTTG +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQGTLAP*QSPTLL
Trigger: CAAGAGTGTGGGGGACTGGCAGGGAGCGAGGGTCCC...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGGCCACGACCCTGAGCTaGCAAGAAGGGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQATTLS*QEGAAS
Trigger: GCTGGCTGCCCCTTCTTGGCAGCTCAGGGTCGTGGC...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACTTGGGCTACACCCTCTaGCTGCAAGACTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: MLSGGRALAELRRRGPMYLGYTL*LQDLPP
Trigger: GGGTGGCAAGTCTTGCAGGCAGAGGGTGTAGCCCAA...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTAGAAATCCGCTGGGCTaGAAGGGCAGGTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPRNPLG*KGRSMV
Trigger: CACCATGGACCTGCCCTTCCAGCCCAGCGGATTTCT...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338797.10
CDS-3UTR CCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCGGGCGGAGTCAGAATTaGTCCTTCTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPGRSQN*SFSSWC
Trigger: ACACCAGCTGGAGAAGGACCAATTCTGACTCCGCCC...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTTCTGTTCTGTGGCCCTaGCAGAGGCACCTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPSVLWP*QRHLCL
Trigger: TAGGCAGAGGTGCCTCTGCCAGGGCCACAGAACAGA...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGTCTCAGGGAGGACCGTaGTCCTCGTCTCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQSQGGP*SSSRGP
Trigger: GGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGA...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGCCGCAATGCAGTTTTaGGGGGATCAGAACAGCAGT +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRAAMQF*GDQNSS
Trigger: ACTGCTGTTCTGATCCCCCCAAAACTGCATTGCGGC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCAAAGGGACCTTGACCTaGACAGACCAACAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGKGTLT*TDQQCP
Trigger: GGGACACTGTTGGTCTGTCCAGGTCAAGGTCCCTTT...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGGTGATACAGACCCCCTaGGAGGCCCGCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQVIQTP*EARPGP
Trigger: TGGACCTGGGCGGGCCTCCCAGGGGGTCTGTATCAC...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGAAGGCTGTTCAGGCCTaGGATGCTGGGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEKAVQA*DAGQKW
Trigger: CCACTTCTGCCCAGCATCCCAGGCCTGAACAGCCTT...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGGGTCGGAGGGCTCCTTaGAAATACAGAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGGRRAP*KYRKLR
Trigger: CCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACC...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCTGGGATTTCTGGAGCTaGAGCATCAACAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRWDFWS*SINSQS
Trigger: GCTCTGGCTGTTGATGCTCCAGCTCCAGAAATCCCA...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594658.5
CDS-3UTR TCA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCGGCAGGCTGGGTCTTTaGGAGACCCTCAATAAAAGC +
Preference number: 4 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPGRLGL*ETLNKS
Trigger: GCTTTTATTGAGGGTCTCTCAAAGACCCAGCCTGCC...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGCTCAATGCCTTCTTTTaGAAACCGCATCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMLNAFF*KPHPGG
Trigger: CCCGCCTGGATGCGGTTTTCAAAAGAAGGCATTGAG...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCAACACAATGTCACTGTaGATCTGGCTTCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSNTMSL*IWLQDA
Trigger: AGCATCCTGAAGCCAGATTCACAGTGACATTGTGTT...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGAAGGTGGGGACGCCATaGTCTCAGGAGGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRKVGTP*SQEGEP
Trigger: GGGCTCTCCCTCCTGAGAGCATGGCGTCCCCACCTT...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCACCCCCAGAAATCCGCTaGGCTGGAAGGGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAPPEIR*AGRAGP
Trigger: TGGACCTGCCCTTCCAGCCCAGCGGATTTCTGGGGG...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338797.10
CDS-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGGCCTTCTCCTATGAGTaGCCACTTGGCTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEAFSYE*PLGCSD
Trigger: GTCTGAGCAGCCAAGTGGCCACTCATAGGAGAAGGC...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGCAAGACTTGCCACCCTaGGTAGTGACGTCGGCGAAA +
Preference number: 4 (lower is better)
Translates to: GGADGRMSQGPPNHMPQEQDLPP*VVTSAK
Trigger: TTTCGCCGACGTCACTACCCAGGGTGGCAAGTCTTG...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGGCACGGCAGGGCCAGTaGACTTTGGCTGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQARQGQ*TLAAKA
Trigger: GGCTTTGGCAGCCAAAGTCCACTGGCCCTGCCGTGC...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTGTTTGCATATATCAGTaGGGCCACCCAGCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPVCIYQ*GHPAPR
Trigger: CCTAGGGGCTGGGTGGCCCCACTGATATATGCAAAC...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGCTGGCTTCAGGATGCTaGAAATGGGCCACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRLASGC*KWATGL
Trigger: CAGGCCCGTGGCCCATTTTCAGCATCCTGAAGCCAG...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCAGAGTATGGGGTGCCTaGCCCCTGCCTGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSRVWGA*PLPGQD
Trigger: GTCCTGGCCAGGCAGGGGTCAGGCACCCCATACTCT...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTGGAGAGGGGATGAAATaGCAGTTCCACCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPGEGMK*QFHPGS
Trigger: AGAACCTGGGTGGAACTGGCATTTCATCCCCTCTCC...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCCTCTCAGGCAAGTGTTaGCTTAAAAGATTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSLSGKC*LKRLSE
Trigger: CTCGCTTAATCTTTTAAGCCAACACTTGCCTGAGAG...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCTGTTTTGAGATAACTTaGGGTGAAACCCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFCFEIT*GETQKP
Trigger: CGGCTTTTGGGTTTCACCCCAAGTTATCTCAAAACA...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTGGTCTCAGCTGCCACTaGTCATGGCATCTTCACACA +
Preference number: 4 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPGLSCH*SWHLHT
Trigger: TGTGTGAAGATGCCATGACCAGTGGCAGCTGAGACC...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GGTGTCTGTGGCCAGTGGGGGTGGGTGGACACCTGTGCCACACGGAAGAGTATGAAGAACCCTCTTCTCTaGAGGACACAGAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GVCGQWGWVDTCATRKSMKNPLL*RTQREA
Trigger: AGCCTCTCTCTGTGTCCTCCAGAGAAGAGGGTTCTT...CATACTCTTCCGTGTGGCACAGGTGTCCACCCACCCCCACTGGCCACAGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCGTCGCAGCCCGAGTTTaGAAGGATGTTTGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCVAARV*KDVWLK
Trigger: TTTTAACCAAACATCCTTCCAAACTCGGGCTGCGAC...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGAGGGCCAGTGGACTTTaGCTGCCAAAGCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRRASGL*LPKPSL
Trigger: GAGGGAGGGCTTTGGCAGCCAAAGTCCACTGGCCCT...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 72 bp AACGTGACCAGGGAGCCTTCTCCTATGAGTGGCCACTaGGCTGCTCAGACACATGCCAAAGGCATTGCCGGG +
Preference number: 4 (lower is better)
Translates to: NVTREPSPMSGH*AAQTHAKGIAG
Trigger: CCCGGCAATGCCTTTGGCATGTGTCTGAGCAGCCAAGTGGCCACTCATAGGAGAAGGCTCCCTGGTCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 72 bp AGGCTGAACTTGGGCTACACCCTCTGCCTGCAAGACTaGCCACCCTGGGTAGTGACGTCGGCGAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: RLNLGYTLCLQD*PPWVVTSAKQE
Trigger: TTCCTGTTTCGCCGACGTCACTACCCAGGGTGGCAAGTCTTGCAGGCAGAGGGTGTAGCCCAAGTTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGTTGGGCTACACCCTCTaGCTGCAAGACTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQLGYTL*LQDLPP
Trigger: GGGTGGCAAGTCTTGCAGGCAGAGGGTGTAGCCCAA...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCCCGAGGAGGGAGGACTaGTTGAGCCCAGGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSPRRED*LSPGVR
Trigger: TCGGACTCCTGGGCTCAAGCAGTCCTCCCTCCTCGG...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGGGGCTGGGCAAGGGTTaGCCCCAAATTCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLGLGKG*PQIPEH
Trigger: GTGTTCTGGAATTTGGGGGCAACCCTTGCCCAGCCC...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGCTTCTTACACTCAGGTaGGTGGCGGGCTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQLLTLR*VAGCFG
Trigger: CCCAAAGCAGCCCGCCACCCACCTGAGTGTAAGAAG...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGTGGGATGCTCCGAGGTaGGCATCCCTCCTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQWDAPR*ASLLSY
Trigger: ATAGGAGAGGAGGGATGCCCACCTCGGAGCATCCCA...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGCTGCTGGCTCCTGGCTaGGCCCCGGGTACTCGCGTG +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRLLAPG*APGTRV
Trigger: CACGCGAGTACCCGGGGCCCAGCCAGGAGCCAGCAG...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGAAGGCTGTTCAGGCCTaGGATGCTGGGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQKAVQA*DAGQKW
Trigger: CCACTTCTGCCCAGCATCCCAGGCCTGAACAGCCTT...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGGGAAATGGAGGCCCCTaGTCCATGGTGAATGGGGGT +
Preference number: 4 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLGNGGP*SMVNGG
Trigger: ACCCCCATTCACCATGGACCAGGGGCCTCCATTTCC...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 72 bp GTGGCCACTTGGCTGCTCAGACACATGCCAAAGGCATaGCCGGGCAAAGAGAGGAAGGGATGGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: VATWLLRHMPKA*PGKERKGWLLG
Trigger: TCCTAGCAACCATCCCTTCCTCTCTTTGCCCGGCAATGCCTTTGGCATGTGTCTGAGCAGCCAAGTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 72 bp CTTACTCCACCAGCCTCTCCCTGGTCGGAGGGCTCCTaGGAAATACAGAAAACTCAGGAAGCAGGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LTPPASPWSEGS*EIQKTQEAGRS
Trigger: GCTGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCTGGTGGAGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCGCAGCAGGAGCAACGTaGCCAGGGAGCCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSAAGAT*PGSLLL
Trigger: TAGGAGAAGGCTCCCTGGTCACGTTGCTCCTGCTGC...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCCGGCTGGGGCCCAGTTaGAGGTACTGGGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSRLGPS*RYWDFW
Trigger: CCAGAAATCCCAGTACCTGCAACTGGGCCCCAGCCG...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGGAAGGTGATGGGAGCTaGTGTTTTCAGGGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLEGDGS*CFQGEV
Trigger: CACCTCGCCCTGAAAACAGCAGCTCCCATCACCTTC...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCGGACCTCACAGGACTTaGGCCTGGACCCCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSGPHRT*AWTPSS
Trigger: AGAAGACGGGGTCCAGGCCCAAGTCCTGTGAGGTCC...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CCAAACACACTGATGCCAACACTCTCCTCCCCAGAGCCGAAAACCCACAAGCAGTTGAACTGCTCCAGCTaGTGGGACAGAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: PNTLMPTLSSPEPKTHKQLNCSS*WDRALA
Trigger: GGCCAATGCTCTGTCCCACCAGCTGGAGCAGTTCAA...CTGCTTGTGGGTTTTCGGCTCTGGGGAGGAGAGTGTTGGCATCAGTGTGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAAGCCAGAGGGTAGGGTaGAGAGGGGATGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVASQRVG*RGDEMP
Trigger: TGGCATTTCATCCCCTCTCCACCCTACCCTCTGGCT...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 72 bp CCAAAGGCATTGCCGGGCAAAGAGAGGAAGGGATGGTaGCTAGGATCAAACCCAGCTCTGAGGACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PKALPGKERKGW*LGSNPALRTEA
Trigger: GGCTTCTGTCCTCAGAGCTGGGTTTGATCCTAGCAACCATCCCTTCCTCTCTTTGCCCGGCAATGCCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGGTGGGCGATGCCTGCTaGCGCCTTGCCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRVGDAC*RLASVL
Trigger: GAGCACAGAGGCAAGGCGTCAGCAGGCATCGCCCAC...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp ATGCTCTCAGGAGGGAGAGCCCTGGCTGAACTTCGCCGTAGGGGACCGATGTACAACACAATGTCACTGTaGATCTGGCTTCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: MLSGGRALAELRRRGPMYNTMSL*IWLQDA
Trigger: AGCATCCTGAAGCCAGATTCACAGTGACATTGTGTT...GTACATCGGTCCCCTACGGCGAAGTTCAGCCAGGGCTCTCCCTCCTGAGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGCAGAGAGGTCTCAGCTaGCACTGGTCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRQRGLS*HWSWHL
Trigger: AAGATGCCATGACCAGTGGCAGCTGAGACCTCTCTG...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCTCCAGGCCCGAGGATTaGAAGGGGGTCAGAGAGACA +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSSRPED*KGVRET
Trigger: TGTCTCTCTGACCCCCTTCCAATCCTCGGGCCTGGA...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCGGAAATGGAGGCCCCTaGTCCATGGTGAATGGGGGT +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSGNGGP*SMVNGG
Trigger: ACCCCCATTCACCATGGACCAGGGGCCTCCATTTCC...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 72 bp CAGGAAGCAGGTCGCAGCCCGAGTTTGGAAGGATGTTaGGTTAAAAACCAGCTCAAGGCCCACCTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QEAGRSPSLEGC*VKNQLKAHLRE
Trigger: CTCCCTTAGGTGGGCCTTGAGCTGGTTTTTAACCAAACATCCTTCCAAACTCGGGCTGCGACCTGCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGATGCTCTGTCCACTTTaGGCCTGCCCCGGTGGACGC +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRMLCPL*ACPGGR
Trigger: GCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCAT...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGCGGAAGAGTATGGGGTaGCTGACCCCTGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRRKSMG*LTPAWP
Trigger: TGGCCAGGCAGGGGTCAGGCACCCCATACTCTTCCG...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGACTTCCCGGCAAAGGTaGCCACCGATGGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRTSRQR*PPMGLP
Trigger: AGGCAGGCCCATCGGTGGCCACCTTTGCCGGGAAGT...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCAGCCAGAGGGTAGGGTaGAGAGGGGATGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSSQRVG*RGDEMP
Trigger: TGGCATTTCATCCCCTCTCCACCCTACCCTCTGGCT...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCTACTGGCCAAGTCCATaGCTAAGTCCCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSYWPSP*LSPLLV
Trigger: CACCAGGAGGGGACTTAGCCATGGACTTGGCCAGTA...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGGGGAGCCTTCTCCTATaGGTGGCCACTTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRGSLLL*VATWLL
Trigger: GAGCAGCCAAGTGGCCACTCATAGGAGAAGGCTCCC...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGAAAGAGAGGAAGGGATaGTTGCTAGGATCAAACCCA +
Preference number: 4 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRKERKG*LLGSNP
Trigger: TGGGTTTGATCCTAGCAACCATCCCTTCCTCTCTTT...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGAAAGAGAGGAAGGGATaGTTGCTAGGATCAAACCCA +
Preference number: 4 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLKERKG*LLGSNP
Trigger: TGGGTTTGATCCTAGCAACCATCCCTTCCTCTCTTT...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGCCCACGGGACGTCCGTaGCAGAGTATACATGCTAGG +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRPTGRP*QSIHAR
Trigger: CCTAGCATGTATACTCTGCCACGGACGTCCCGTGGG...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 72 bp CCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCTTATaGGAAAAAGAACTCCATAATGGACCAAGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: PGKLGPRSTRFL*EKELHNGPRSS
Trigger: TGACGACCTTGGTCCATTATGGAGTTCTTTTTCCAATAAGAACCTGGTGGACCGAGGTCCGAGCTTGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGACTTACTCCACCTCCTaGTCCCAGGGGGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRTYSTS*SQGENG
Trigger: ACCATTCTCCCCCTGGGAGCAGGAGGTGGAGTAAGT...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGGTGGTGAGAGGTACATaGTGCCATAGGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRVVRGT*CHRGSC
Trigger: ACAGCTGCCCCTATGGCACCATGTACCTCTCACCAC...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGGCCTTCTCCTATGAGTaGCCACTTGGCTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRAFSYE*PLGCSD
Trigger: GTCTGAGCAGCCAAGTGGCCACTCATAGGAGAAGGC...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR GCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGACATGCCAAAGGCATTaGCGGGCAAAGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRTCQRH*RAKRGR
Trigger: CCTTCCTCTCTTTGCCCGGCAATGCCTTTGGCATGT...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGGCCGCAATGCAGTTTTaGGGGGATCAGAACAGCAGT +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRAAMQF*GDQNSS
Trigger: ACTGCTGTTCTGATCCCCCCAAAACTGCATTGCGGC...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGGGTGGATACAGGCTCTaGAATCATCAGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRGGYRL*NHQSQH
Trigger: GTGCTGGCTCTGATGATTCCAGAGCCTGTATCCACC...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGCAGGAGCCCAGAAGGTaGATACAGGCTCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRQEPRR*IQALES
Trigger: TGATTCCAGAGCCTGTATCCACCTTCTGGGCTCCTG...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
3UTR CAA 72 bp ATACAGAAAACTCAGGAAGCAGGTCGCAGCCCGAGTTaGGAAGGATGTTTGGTTAAAAACCAGCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: IQKTQEAGRSPS*EGCLVKNQLKA
Trigger: GGCCTTGAGCTGGTTTTTAACCAAACATCCTTCCAAACTCGGGCTGCGACCTGCTTCCTGAGTTTTCTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR TCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGAAGAGAAAGGGACCTTaGCCTGGACAGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRKRKGP*PGQTNS
Trigger: ACTGTTGGTCTGTCCAGGTCAAGGTCCCTTTCTCTT...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCTGTTTTGAGATAACTTaGGGTGAAACCCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSCFEIT*GETQKP
Trigger: CGGCTTTTGGGTTTCACCCCAAGTTATCTCAAAACA...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CCA 90 bp TTTGAGATAACTTGGGGTGAAACCCAAAAGCCGGACTCACTTCTTACACTCAGGAAGAACCCTCTTCTCTaGAGGACACAGAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FEITWGETQKPDSLLTLRKNPLL*RTQREA
Trigger: AGCCTCTCTCTGTGTCCTCCAGAGAAGAGGGTTCTT...CCTGAGTGTAAGAAGTGAGTCCGGCTTTTGGGTTTCACCCCAAGTTATCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGCCCAGGTGCGTCAGGTaGGCCGCGAGGTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRPRCVR*AARLPV
Trigger: CACCGGCAACCTCGCGGCCAACCTGACGCACCTGGG...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGCTGCGTGGGCGTCATaGTGCTCTGGTGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRAAWAS*CSGAGR
Trigger: CCGCCCTGCACCAGAGCACAATGACGCCCACGCAGC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCCCCAGGTGCGTCAGGTaGGCCGCGAGGTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: SRPRDWASREVDNRGRAGPRCVR*AARLPV
Trigger: CACCGGCAACCTCGCGGCCAACCTGACGCACCTGGG...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCCTCGCGGCCTCGCGATaGGGCTTCGCGGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: SRPRDWASREVDNRGRAGLAASR*GFAGGG
Trigger: TCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAG...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGCCTGCCGTCCGTGTTaGTCCACTGACAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SRPRDWASREVDNRGRAGACRPC*STDRGR
Trigger: CCGGCCCCTGTCAGTGGACAAACACGGACGGCAGGC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGCTGCGTGGGCGTCATaGTGCTCTGGTGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: SRPRDWASREVDNRGRAGAAWAS*CSGAGR
Trigger: CCGCCCTGCACCAGAGCACAATGACGCCCACGCAGC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGGGACCTCACAGGACTaGGGCCTGGACCCCGTCTTC +
Preference number: 5 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRGTSQD*GLDPVF
Trigger: GAAGACGGGGTCCAGGCCCAAGTCCTGTGAGGTCCC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp GCTCCTGGCTGGGCCCCGGGTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGCGCCCGCCGGAGGTaGGACGGATGGGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: APGWAPGTRVGPTVPGKLGARRR*DGWGMR
Trigger: CCTCATACCCCATCCGTCCAACCTCCGGCGGGCGCC...GAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTACCCGGGGCCCAGCCAGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGACCTCACAGGACTaGGGCCTGGACCCCGTCTTC +
Preference number: 5 (lower is better)
Translates to: SRPRDWASREVDNRGRAGGTSQD*GLDPVF
Trigger: GAAGACGGGGTCCAGGCCCAAGTCCTGTGAGGTCCC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGCCCAGGTGCGTCAGGTaGGCCGCGAGGTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: SAALHALSTLRLPRWTPGPRCVR*AARLPV
Trigger: CACCGGCAACCTCGCGGCCAACCTGACGCACCTGGG...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGTGAGGGGCCGAGTCTaGCCCCTGCTCTTAGGCTGT +
Preference number: 5 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGVRGRV*PLLLGC
Trigger: ACAGCCTAAGAGCAGGGGCAAGACTCGGCCCCTCAC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGGCCTGCCGTCCGTGTTaGTCCACTGACAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SAALHALSTLRLPRWTPGACRPC*STDRGR
Trigger: CCGGCCCCTGTCAGTGGACAAACACGGACGGCAGGC...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCATGCCTGCTGACGCCTaGCCTCTGTGCTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGMPADA*PLCSGT
Trigger: TGTCCCTGAGCACAGAGGCAAGGCGTCAGCAGGCAT...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGATGCCTGCTGACGCCTaGCCTCTGTGCTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRMPADA*PLCSGT
Trigger: TGTCCCTGAGCACAGAGGCAAGGCGTCAGCAGGCAT...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCAGGGCGGAGTCAGAATaGGTCCTTCTCCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGRAESE*VLLQLV
Trigger: CACCAGCTGGAGAAGGACCAATTCTGACTCCGCCCT...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp GGCCCGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCCTGGACCCCGTCTTCTaGGTGTCCCATGCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: GPARGLAIGLRGRWTTGGLDPVF*VSHACL
Trigger: CAAGCAAGCATGGGACACCAAGAAGACGGGGTCCAG...GCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGGCAGACGGGAAGATGTaGATTCCGGGGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRADGKM*IPGTSQ
Trigger: CTGTGAGGTCCCCGGAATCAACATCTTCCCGTCTGC...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGCAGACGGGAAGATGTaGATTCCGGGGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGADGKM*IPGTSQ
Trigger: CTGTGAGGTCCCCGGAATCAACATCTTCCCGTCTGC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGCTGCGTGGGCGTCATaGTGCTCTGGTGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAAAWAS*CSGAGR
Trigger: CCGCCCTGCACCAGAGCACAATGACGCCCACGCAGC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCCTGGACCCCGTCTTCTaGGTGTCCCATGCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: SRPRDWASREVDNRGRAGLDPVF*VSHACL
Trigger: CAAGCAAGCATGGGACACCAAGAAGACGGGGTCCAG...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCGGGTGGCGGGCTGCTTaGGGGCGCATGGCCTCCATT +
Preference number: 5 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFGWRAA*GRMASI
Trigger: AATGGAGGCCATGCGCCCCAAAGCAGCCCGCCACCC...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTGGGTGGCGGGCTGCTTaGGGGCGCATGGCCTCCATT +
Preference number: 5 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGGWRAA*GRMASI
Trigger: AATGGAGGCCATGCGCCCCAAAGCAGCCCGCCACCC...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GCCCACCTAAGGGAGGCACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGCCCTGATGCCTCCCTaGCAGGGCCCGTGGTATGGG +
Preference number: 5 (lower is better)
Translates to: AHLREAPEPPLGTGPAKAALMPP*QGPWYG
Trigger: CCCATACCACGGGCCCTGCAAGGGAGGCATCAGGGC...AGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGTGCCTCCCTTAGGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCGCCCTGATGCCTCCCTaGCAGGGCCCGTGGTATGGG +
Preference number: 5 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSALMPP*QGPWYG
Trigger: CCCATACCACGGGCCCTGCAAGGGAGGCATCAGGGC...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGAGGAGGGAGGACTGCTaGAGCCCAGGAGTCCGAGAC +
Preference number: 5 (lower is better)
Translates to: SAALHALSTLRLPRWTPGRREDC*SPGVRD
Trigger: GTCTCGGACTCCTGGGCTCAAGCAGTCCTCCCTCCT...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCGGAGATCAGAAGTTCTaGATGGCTGGGCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGGDQKF*MAGLGK
Trigger: CTTGCCCAGCCCAGCCATCAAGAACTTCTGATCTCC...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTCTCGCGGCCTCGCGATaGGGCTTCGCGGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGLAASR*GFAGGG
Trigger: TCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAG...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCCTCGCGGCCTCGCGATaGGGCTTCGCGGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRLAASR*GFAGGG
Trigger: TCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAG...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCCCTCAATGCCTTCTTTaGAAAACCGCATCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGPQCLL*KTASRR
Trigger: CCGCCTGGATGCGGTTTTCAAAAGAAGGCATTGAGG...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGCTCGGACCGGCGGGTTaGCATATATCAGTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SAALHALSTLRLPRWTPGLGPAG*HISVGP
Trigger: TGGCCCCACTGATATATGCAAACCCGCCGGTCCGAG...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGCTGAATTTCCGCGGATaGTTCGAAGTCGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: AASRLGFAGGGQPGAGWRLNFRG*FEVAIF
Trigger: GAAGATGGCGACTTCGAACAATCCGCGGAAATTCAG...CCGCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCGCCTGCCGTCCGTGTTaGTCCACTGACAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRACRPC*STDRGR
Trigger: CCGGCCCCTGTCAGTGGACAAACACGGACGGCAGGC...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
ENST00000601916.1
CDS-3UTR CAA 90 bp TCCGCCGCCCTGCATGCTCTGTCCACTTTGCGCCTGCCCCGGTGGACGCCAGGGAGGGCGGAGTCAGAATaGGTCCTTCTCCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SAALHALSTLRLPRWTPGRAESE*VLLQLV
Trigger: CACCAGCTGGAGAAGGACCAATTCTGACTCCGCCCT...CCCTGGCGTCCACCGGGGCAGGCGCAAAGTGGACAGAGCATGCAGGGCGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTGCTGCGTGGGCGTCATaGTGCTCTGGTGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGAAWAS*CSGAGR
Trigger: CCGCCCTGCACCAGAGCACAATGACGCCCACGCAGC...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCTCGCGGCCTCGCGATaGGGCTTCGCGGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPLAASR*GFAGGG
Trigger: TCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAG...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCGGCGCCCGCCGGAGGTaGGACGGATGGGGTATGAGG +
Preference number: 5 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPGARRR*DGWGMR
Trigger: CCTCATACCCCATCCGTCCAACCTCCGGCGGGCGCC...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGATGTAGCCCCAGAACTTaGGGAGGCCGAGGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGCSPRT*GGRGGR
Trigger: CCTCCCTCCTCGGCCTCCCAAAGTTCTGGGGCTACA...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CGTACGCACACACAAAAGGCCGTGATACAGACCCCCTGGGAGGCCCGCCCAGGTGGGACCTCACAGGACTaGGGCCTGGACCCCGTCTTC +
Preference number: 5 (lower is better)
Translates to: RTHTQKAVIQTPWEARPGGTSQD*GLDPVF
Trigger: GAAGACGGGGTCCAGGCCCAAGTCCTGTGAGGTCCC...ACCTGGGCGGGCCTCCCAGGGGGTCTGTATCACGGCCTTTTGTGTGTGCGTACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCATGCCTGCTGACGCCTaGCCTCTGTGCTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSMPADA*PLCSGT
Trigger: TGTCCCTGAGCACAGAGGCAAGGCGTCAGCAGGCAT...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCCAGGGTGGAAGTGTGTaGCGGGGAGCTCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRQGGSV*RGAPWG
Trigger: TCCCCAGGGAGCTCCCCGCAACACACTTCCACCCTG...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321949.13
ENST00000338797.10
ENST00000594658.5
CDS-3UTR CAA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGACTCTGCCTGCAAGACTaGCCACCCTGGGTAGTGACG +
Preference number: 5 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGLCLQD*PPWVVT
Trigger: CGTCACTACCCAGGGTGGCAAGTCTTGCAGGCAGAG...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTGGCGGTCGCAGCCCGAGTTaGGAAGGATGTTTGGTTAAA +
Preference number: 5 (lower is better)
Translates to: SRPRDWASREVDNRGRAGGRSPS*EGCLVK
Trigger: TTTAACCAAACATCCTTCCAAACTCGGGCTGCGACC...GCCAGCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGGTGAGGGGCCGAGTCTaGCCCCTGCTCTTAGGCTGT +
Preference number: 5 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGVRGRV*PLLLGC
Trigger: ACAGCCTAAGAGCAGGGGCAAGACTCGGCCCCTCAC...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTCAGGGAACAGGACACTaGGCTCAGGTGGAGCTGACG +
Preference number: 5 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGQGTGH*AQVELT
Trigger: CGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCCTG...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTCTCGGACCGGCGGGTTaGCATATATCAGTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGLGPAG*HISVGP
Trigger: TGGCCCCACTGATATATGCAAACCCGCCGGTCCGAG...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp ACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCTGCCCCTCAGGAGTATACATGCTAGGGTaGGGGGAGAGCCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: TAGLCTRRNLPTWACPSGVYMLG*GESQPG
Trigger: CCCAGGCTGGCTCTCCCCCAACCCTAGCATGTATAC...TCCTGAGGGGCAGGCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCAGGGCGGAGTCAGAATaGGTCCTTCTCCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFRAESE*VLLQLV
Trigger: CACCAGCTGGAGAAGGACCAATTCTGACTCCGCCCT...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCCTGGACCCCGTCTTCTaGGTGTCCCATGCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSLDPVF*VSHACL
Trigger: CAAGCAAGCATGGGACACCAAGAAGACGGGGTCCAG...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCATGCCTGCTGACGCCTaGCCTCTGTGCTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCMPADA*PLCSGT
Trigger: TGTCCCTGAGCACAGAGGCAAGGCGTCAGCAGGCAT...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCCAGTCCCCCACACTCTaGGGGCAGAGAGGTCTCAGC +
Preference number: 5 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRQSPTL*GQRGLS
Trigger: GCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACTG...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp ACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTTCCCTATGAGTGGCCACTaGGCTGCTCAGACACATGCC +
Preference number: 5 (lower is better)
Translates to: TRVGPTVPGKLGPRSTRFPMSGH*AAQTHA
Trigger: GGCATGTGTCTGAGCAGCCAAGTGGCCACTCATAGG...GAACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TGGACAAACAGTCGGAAAATGCGCCACGGCCCACAGCCCTGGCGGACCATGCGCAGGAGGGAGGACTGCTaGAGCCCAGGAGTCCGAGAC +
Preference number: 5 (lower is better)
Translates to: WTNSRKMRHGPQPWRTMRRREDC*SPGVRD
Trigger: GTCTCGGACTCCTGGGCTCAAGCAGTCCTCCCTCCT...GCGCATGGTCCGCCAGGGCTGTGGGCCGTGGCGCATTTTCCGACTGTTTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCCAGGGAACAGGACACTaGGCTCAGGTGGAGCTGACG +
Preference number: 5 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCQGTGH*AQVELT
Trigger: CGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCCTG...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCAGGGCCAGTGGACTTaGGCTGCCAAAGCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGQGQWT*AAKALP
Trigger: AGGGAGGGCTTTGGCAGCCAAAGTCCACTGGCCCTG...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGCTGGACCCCGTCTTCTaGGTGTCCCATGCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGLDPVF*VSHACL
Trigger: CAAGCAAGCATGGGACACCAAGAAGACGGGGTCCAG...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTCAGGGTGGAAGTGTGTaGCGGGGAGCTCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPQGGSV*RGAPWG
Trigger: TCCCCAGGGAGCTCCCCGCAACACACTTCCACCCTG...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GTACTCGCGTGGGCCCCACTGTCCCTGGCAAGCTCGGACCTCGGTCCACCAGGTCACATGCCAAAGGCATaGCCGGGCAAAGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VLAWAPLSLASSDLGPPGHMPKA*PGKERK
Trigger: CTTCCTCTCTTTGCCCGGCAATGCCTTTGGCATGTG...ACCTGGTGGACCGAGGTCCGAGCTTGCCAGGGACAGTGGGGCCCACGCGAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GGGAACAGGACACTTGGCTCAGGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCAGGGCCAGTGGACTTaGGCTGCCAAAGCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: GNRTLGSGGADGRMSQGPQGQWT*AAKALP
Trigger: AGGGAGGGCTTTGGCAGCCAAAGTCCACTGGCCCTG...GGGTCCCTGGGACATTCTCCCGTCAGCTCCACCTGAGCCAAGTGTCCTGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGCCCAGGTGCGTCAGGTaGGCCGCGAGGTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLPRCVR*AARLPV
Trigger: CACCGGCAACCTCGCGGCCAACCTGACGCACCTGGG...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GGTGGAGCTGACGGGAGAATGTCCCAGGGACCCCCAAATCACATGCCGCAAGAGTGTAGCCCCAGAACTTaGGGAGGCCGAGGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: GGADGRMSQGPPNHMPQECSPRT*GGRGGR
Trigger: CCTCCCTCCTCGGCCTCCCAAAGTTCTGGGGCTACA...CTCTTGCGGCATGTGATTTGGGGGTCCCTGGGACATTCTCCCGTCAGCTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CGGCTCGCGGCCTCGCGATTGGGCTTCGCGGGAGGTGGACAACCGGGGGCGGGCTCCACCAGGTTCTTATaGGAAAAAGAACTCCATAAT +
Preference number: 5 (lower is better)
Translates to: RLAASRLGFAGGGQPGAGSTRFL*EKELHN
Trigger: ATTATGGAGTTCTTTTTCCAATAAGAACCTGGTGGA...GCCCGCCCCCGGTTGTCCACCTCCCGCGAAGCCCAATCGCGAGGCCGCGAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TTCTCAGGGAGGACCGTGGTCCTCGTCTCGGGGACCCTCGCTCCCTGCCAGTCCGGTCGCAGCCCGAGTTaGGAAGGATGTTTGGTTAAA +
Preference number: 5 (lower is better)
Translates to: FSGRTVVLVSGTLAPCQSGRSPS*EGCLVK
Trigger: TTTAACCAAACATCCTTCCAAACTCGGGCTGCGACC...GGACTGGCAGGGAGCGAGGGTCCCCGAGACGAGGACCACGGTCCTCCCTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTGTATACATGCTAGGGTaGGGGGAGAGCCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPVYMLG*GESQPG
Trigger: CCCAGGCTGGCTCTCCCCCAACCCTAGCATGTATAC...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp ACCAGAGCCCCCTCTAGGGACGGGTCCTGCCAAGGCTGTTCAGGCCTGGGATGCCTGAATTTCCGCGGATaGTTCGAAGTCGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: TRAPSRDGSCQGCSGLGCLNFRG*FEVAIF
Trigger: GAAGATGGCGACTTCGAACAATCCGCGGAAATTCAG...GCATCCCAGGCCTGAACAGCCTTGGCAGGACCCGTCCCTAGAGGGGGCTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTGCAGACGGGAAGATGTaGATTCCGGGGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPADGKM*IPGTSQ
Trigger: CTGTGAGGTCCCCGGAATCAACATCTTCCCGTCTGC...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCACAGGGTGGAAGTGTGTaGCGGGGAGCTCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAQGGSV*RGAPWG
Trigger: TCCCCAGGGAGCTCCCCGCAACACACTTCCACCCTG...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTCCTATGAGTGGCCACTaGGCTGCTCAGACACATGCC +
Preference number: 5 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPPMSGH*AAQTHA
Trigger: GGCATGTGTCTGAGCAGCCAAGTGGCCACTCATAGG...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp ACCAAGGACACAGACGGCGGGTCTATGTACACGGCGCAACCTCCCCACGTGGGCCCTCAATGCCTTCTTTaGAAAACCGCATCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: TKDTDGGSMYTAQPPHVGPQCLL*KTASRR
Trigger: CCGCCTGGATGCGGTTTTCAAAAGAAGGCATTGAGG...GCCCACGTGGGGAGGTTGCGCCGTGTACATAGACCCGCCGTCTGTGTCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp TGGCATCTTCACACACACACTCTAAGGACTAGCAGGCACCTCTGGGAGAGGCTGCAGTCCCCCACACTCTaGGGGCAGAGAGGTCTCAGC +
Preference number: 5 (lower is better)
Translates to: WHLHTHTLRTSRHLWERLQSPTL*GQRGLS
Trigger: GCTGAGACCTCTCTGCCCCAAGAGTGTGGGGGACTG...CAGCCTCTCCCAGAGGTGCCTGCTAGTCCTTAGAGTGTGTGTGTGAAGATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTCACATGCCAAAGGCATaGCCGGGCAAAGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPHMPKA*PGKERK
Trigger: CTTCCTCTCTTTGCCCGGCAATGCCTTTGGCATGTG...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GACCCTGAGCTGCCAAGAAGGGGCAGCCAGCAGACCACGCTGCCCAAGAGAGGGCCGCATCCAGGCGGGTaGCTTGTAATTTTATTAAGG +
Preference number: 5 (lower is better)
Translates to: DPELPRRGSQQTTLPKRGPHPGG*LVILLR
Trigger: CCTTAATAAAATTACAAGCAACCCGCCTGGATGCGG...CCCTCTCTTGGGCAGCGTGGTCTGCTGGCTGCCCCTTCTTGGCAGCTCAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTGAGAGGAAGGGATGGTaGCTAGGATCAAACCCAGCT +
Preference number: 5 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPERKGW*LGSNPA
Trigger: AGCTGGGTTTGATCCTAGCAACCATCCCTTCCTCTC...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCACTCTGCCTGCAAGACTaGCCACCCTGGGTAGTGACG +
Preference number: 5 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVALCLQD*PPWVVT
Trigger: CGTCACTACCCAGGGTGGCAAGTCTTGCAGGCAGAG...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAGCAGACGGGAAGATGTaGATTCCGGGGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAADGKM*IPGTSQ
Trigger: CTGTGAGGTCCCCGGAATCAACATCTTCCCGTCTGC...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTTGGTCGGAGGGCTCCTaGGAAATACAGAAAACTCAG +
Preference number: 5 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPWSEGS*EIQKTQ
Trigger: CTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCA...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCATGGGCTGGGCAAGGGTaGCCCCCAAATTCCAGAACA +
Preference number: 5 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVAWAGQG*PPNSRT
Trigger: TGTTCTGGAATTTGGGGGCAACCCTTGCCCAGCCCA...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGGGAGATCAGAAGTTCTaGATGGCTGGGCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRGDQKF*MAGLGK
Trigger: CTTGCCCAGCCCAGCCATCAAGAACTTCTGATCTCC...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCTGGGCTGGGCAAGGGTaGCCCCCAAATTCCAGAACA +
Preference number: 5 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSWAGQG*PPNSRT
Trigger: TGTTCTGGAATTTGGGGGCAACCCTTGCCCAGCCCA...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AGCCTCTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGCCGCATCCAGGCGGGTaGCTTGTAATTTTATTAAGG +
Preference number: 5 (lower is better)
Translates to: SLSLVGGLLGNTENSGSRPHPGG*LVILLR
Trigger: CCTTAATAAAATTACAAGCAACCCGCCTGGATGCGG...CCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTAGTTTGGAAGGATGTTaGGTTAAAAACCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPSLEGC*VKNQLK
Trigger: CTTGAGCTGGTTTTTAACCAAACATCCTTCCAAACT...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp AAAAGCCAAGGCCCCTTCCCGGAAGTCTGTTCTGTGGCCCTGGCAGAGGCACCTTCCACCAGGTTCTTATaGGAAAAAGAACTCCATAAT +
Preference number: 5 (lower is better)
Translates to: KSQGPFPEVCSVALAEAPSTRFL*EKELHN
Trigger: ATTATGGAGTTCTTTTTCCAATAAGAACCTGGTGGA...AGGTGCCTCTGCCAGGGCCACAGAACAGACTTCCGGGAAGGGGCCTTGGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp GCCTGCCCCTCAGGAAGCGGCTCGTCAAATCACAGTATTTTCACATCACAAAGCTGGTCGGAGGGCTCCTaGGAAATACAGAAAACTCAG +
Preference number: 5 (lower is better)
Translates to: ACPSGSGSSNHSIFTSQSWSEGS*EIQKTQ
Trigger: CTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCA...GCTTTGTGATGTGAAAATACTGTGATTTGACGAGCCGCTTCCTGAGGGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10
CDS-3UTR CAA 90 bp CTCCCTGGTCGGAGGGCTCCTTGGAAATACAGAAAACTCAGGAAGCAGGTCGCAAGTTTGGAAGGATGTTaGGTTAAAAACCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: LPGRRAPWKYRKLRKQVASLEGC*VKNQLK
Trigger: CTTGAGCTGGTTTTTAACCAAACATCCTTCCAAACT...TGCGACCTGCTTCCTGAGTTTTCTGTATTTCCAAGGAGCCCTCCGACCAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321949.13
ENST00000338797.10