RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRTAP (Homo sapiens)

Ensembl gene IDs: ENSG00000170275

Ensembl transcript IDs: ENST00000320954.11, ENST00000449224.1, ENST00000485310.1

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCCTTCCCAGCGGGTGCCTCCTGTTTGGATGCCCTGAGTGGCAATaGGGCTGGACAGATGCCCCACCACGATGGGCGGCCTCCCCACCA +
Preference number: 1 (lower is better)
Translates to: TLPSGCLLFGCPEWQ*GWTDAPPRWAASPP
Trigger: TGGTGGGGAGGCCGCCCATCGTGGTGGGGCATCTGTCCAGCCCCATTGCCACTCAGGGCATCCAAACAGGAGGCACCCGCTGGGAAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR TCA 90 bp GTATCTTTAGACCCTTCCCAGCGGGTGCCTCCTGTTTGGATGCCCTaGGTGGCAATGGGGCTGGACAGATGCCCCACCACGATGGGCGGC +
Preference number: 1 (lower is better)
Translates to: VSLDPSQRVPPVWMP*VAMGLDRCPTTMGG
Trigger: GCCGCCCATCGTGGTGGGGCATCTGTCCAGCCCCATTGCCACTCAGGGCATCCAAACAGGAGGCACCCGCTGGGAAGGGTCTAAAGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 90 bp CTGGGAAGGACACTGCAGCCTGAGGCTATAAGGGGAGTTCACAGCTaGTGGGCACACTATTTACAGACTCAGGAATCCCGGAGCAGGGCG +
Preference number: 1 (lower is better)
Translates to: LGRTLQPEAIRGVHS*WAHYLQTQESRSRA
Trigger: CGCCCTGCTCCGGGATTCCTGAGTCTGTAAATAGTGTGCCCAGCAGCTGTGAACTCCCCTTATAGCCTCAGGCTGCAGTGTCCTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 90 bp ACCTCTGCAGGGCACAGAGGTGGAGTGAGTCACAACACCCAACCCTaGCTGGGTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCT +
Preference number: 1 (lower is better)
Translates to: TSAGHRGGVSHNTQP*LGPCGRRLSFSHTA
Trigger: AGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGACCCAGGCAGGGTTGGGTGTTGTGACTCACTCCACCTCTGTGCCCTGCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp GGAAGGACACTGCAGCCTGAGGCTATAAGGGGAGTTCACAGCTGCTaGGCACACTATTTACAGACTCAGGAATCCCGGAGCAGGGCGTCC +
Preference number: 1 (lower is better)
Translates to: GRTLQPEAIRGVHSC*AHYLQTQESRSRAS
Trigger: GGACGCCCTGCTCCGGGATTCCTGAGTCTGTAAATAGTGTGCCCAGCAGCTGTGAACTCCCCTTATAGCCTCAGGCTGCAGTGTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp CAGAGGTGGAGTGAGTCACAACACCCAACCCTGCCTGGGTCCCTGTaGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGC +
Preference number: 1 (lower is better)
Translates to: QRWSESQHPTLPGSL*TSAFIFSHSWEGHC
Trigger: GCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGACCCAGGCAGGGTTGGGTGTTGTGACTCACTCCACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp GGGCAACTTCAGCCCAAGACAGAAGTGGTAGGGGACTGTCCTGGGTaGGTACCCTCAAAGGAGAACCTGATGCAGGGATTCTTGTGCAGG +
Preference number: 1 (lower is better)
Translates to: GQLQPKTEVVGDCPG*VPSKENLMQGFLCR
Trigger: CCTGCACAAGAATCCCTGCATCAGGTTCTCCTTTGAGGGTACCCACCCAGGACAGTCCCCTACCACTTCTGTCTTGGGCTGAAGTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp CACTATTTACAGACTCAGGAATCCCGGAGCAGGGCGTCCACTCGCTaGGTCCCCCACTACTTTCTAGTCCTGTCTCATCACCCTCTTCCC +
Preference number: 1 (lower is better)
Translates to: HYLQTQESRSRASTR*VPHYFLVLSHHPLP
Trigger: GGGAAGAGGGTGATGAGACAGGACTAGAAAGTAGTGGGGGACCCAGCGAGTGGACGCCCTGCTCCGGGATTCCTGAGTCTGTAAATAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp ACGTGGGCAACTTCAGCCCAAGACAGAAGTGGTAGGGGACTGTCCTaGGTGGGTACCCTCAAAGGAGAACCTGATGCAGGGATTCTTGTG +
Preference number: 1 (lower is better)
Translates to: TWATSAQDRSGRGLS*VGTLKGEPDAGILV
Trigger: CACAAGAATCCCTGCATCAGGTTCTCCTTTGAGGGTACCCACCCAGGACAGTCCCCTACCACTTCTGTCTTGGGCTGAAGTTGCCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 90 bp AAGCACACTCAGGGAGGTGTTGGGTTGAGGTCATTGAGTGCAGCCTaGACACCAGGGTTTCATGGTAGGTTTGGAAGACCCAGCCCAGTT +
Preference number: 1 (lower is better)
Translates to: KHTQGGVGLRSLSAA*TPGFHGRFGRPSPV
Trigger: AACTGGGCTGGGTCTTCCAAACCTACCATGAAACCCTGGTGTGCAGGCTGCACTCAATGACCTCAACCCAACACCTCCCTGAGTGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp CATCCACCAGTAATAACACTGACTCCTCGGGCCAAACACCCCCGCTaGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACA +
Preference number: 1 (lower is better)
Translates to: HPPVITLTPRAKHPR*EYRFCGRGQLQPKT
Trigger: TGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGGGGGTGTTTGGCCCGAGGAGTCAGTGTTATTACTGGTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 90 bp GAGCTCTGCTGCAGACCTGACCTGAGAGAACTCTCCACTTTGATTTaGAGCCAGAACCTCCCATTCCAACCACAGACAGCCTGCTTTGCA +
Preference number: 1 (lower is better)
Translates to: ELCCRPDLRELSTLI*SQNLPFQPQTACFA
Trigger: TGCAAAGCAGGCTGTCTGTGGTTGGAATGGGAGGTTCTGGCTGCAAATCAAAGTGGAGAGTTCTCTCAGGTCAGGTCTGCAGCAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp CAGGAATCTTCTAGGCTCTTCCAAGAAGCACACTCAGGGAGGTGTTaGGTTGAGGTCATTGAGTGCAGCCTGCACACCAGGGTTTCATGG +
Preference number: 1 (lower is better)
Translates to: QESSRLFQEAHSGRC*VEVIECSLHTRVSW
Trigger: CCATGAAACCCTGGTGTGCAGGCTGCACTCAATGACCTCAACCCAACACCTCCCTGAGTGTGCTTCTTGGAAGAGCCTAGAAGATTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR TCA 90 bp AAACCAAGTGCATTCAGATCCCTGTCTCGAGCTCTGCTGCAGACCTaGCCTGAGAGAACTCTCCACTTTGATTTGCAGCCAGAACCTCCC +
Preference number: 1 (lower is better)
Translates to: KPSAFRSLSRALLQT*PERTLHFDLQPEPP
Trigger: GGGAGGTTCTGGCTGCAAATCAAAGTGGAGAGTTCTCTCAGGTCAGGTCTGCAGCAGAGCTCGAGACAGGGATCTGAATGCACTTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR TCA 90 bp TACACAAACCTCCCCTCAGCCCTTCGCTTCTCCACAAGTCAAGTGTaGACAGTAGCAGTGGCCACAAGGAGTATCTTTAGACCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: YTNLPSALRFSTSQV*TVAVATRSIFRPFP
Trigger: TGGGAAGGGTCTAAAGATACTCCTTGTGGCCACTGCTACTGTTCACACTTGACTTGTGGAGAAGCGAAGGGCTGAGGGGAGGTTTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 90 bp CCCCCAACAATAAACCAAGTGCATTCAGATCCCTGTCTCGAGCTCTaGTGCAGACCTGACCTGAGAGAACTCTCCACTTTGATTTGCAGC +
Preference number: 1 (lower is better)
Translates to: PPTINQVHSDPCLEL*CRPDLRELSTLICS
Trigger: GCTGCAAATCAAAGTGGAGAGTTCTCTCAGGTCAGGTCTGCAGCAGAGCTCGAGACAGGGATCTGAATGCACTTGGTTTATTGTTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR TCA 90 bp GAGACGGGGGCTTCCCTTTCACTTTGGAGAGTAAAGAGAAGGCTCTaGGGTATCAACAGCCTGGGCTGTTGGGAAAAGGACAAAGAATCT +
Preference number: 1 (lower is better)
Translates to: ETGASLSLWRVKRRL*GINSLGCWEKDKES
Trigger: AGATTCTTTGTCCTTTTCCCAACAGCCCAGGCTGTTGATACCTCAGAGCCTTCTCTTTACTCTCCAAAGTGAAAGGGAAGCCCCCGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
3UTR TCA 90 bp TTGGTTTTCTCTGACCTTAAGGTAACTCCTTCTCAGTCCTTTGGCTaGTTTCCCATTTCCCAGAGAGCCCAAGGGCTCCATCCATGGCTC +
Preference number: 1 (lower is better)
Translates to: LVFSDLKVTPSQSFG*FPISQRAQGLHPWL
Trigger: GAGCCATGGATGGAGCCCTTGGGCTCTCTGGGAAATGGGAAATCAGCCAAAGGACTGAGAAGGAGTTACCTTAAGGTCAGAGAAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 90 bp GCCTACAGCCTCTTTTCCAGAGACTTGCCCTCAACTGAAGTCACTTaGCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCCAA +
Preference number: 1 (lower is better)
Translates to: AYSLFSRDLPSTEVT*LQMYPHSQRTSHSQ
Trigger: TTGGCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGTTGAGGGCAAGTCTCTGGAAAAGAGGCTGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp CAAAATATAAATCAATCAAGGCACTCCTCTGTTCAAACCCTCCAGTaGTTCCCATCTCACTTAGCAGAAGCCAAGGCCCTCCACCACCTG +
Preference number: 1 (lower is better)
Translates to: QNINQSRHSSVQTLQ*FPSHLAEAKALHHL
Trigger: CAGGTGGTGGAGGGCCTTGGCTTCTGCTAAGTGAGATGGGAACCACTGGAGGGTTTGAACAGAGGAGTGCCTTGATTGATTTATATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR TCA 90 bp ACTGTTTGGGGGATGGCAGATGATCAAGAGTTCAGACAGCTGCGATaGAGGATTAGTTGTGGGTTTTTCTCAGTGCCTTGCTACAAACTG +
Preference number: 1 (lower is better)
Translates to: TVWGMADDQEFRQLR*RISCGFFSVPCYKL
Trigger: CAGTTTGTAGCAAGGCACTGAGAAAAACCCACAACTAATCCTTCATCGCAGCTGTCTGAACTCTTGATCATCTGCCATCCCCCAAACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 90 bp AAGTCACTGTTTGGGGGATGGCAGATGATCAAGAGTTCAGACAGCTaGGATGAAGGATTAGTTGTGGGTTTTTCTCAGTGCCTTGCTACA +
Preference number: 1 (lower is better)
Translates to: KSLFGGWQMIKSSDS*DEGLVVGFSQCLAT
Trigger: TGTAGCAAGGCACTGAGAAAAACCCACAACTAATCCTTCATCGCAGCTGTCTGAACTCTTGATCATCTGCCATCCCCCAAACAGTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp CCTCAAATGGGATCGGCCAACCGTTGTAATTTTGGAGATGCAAAGTaGGGCAAAAGCCACATTTCTGCACTCTACACTCTCTACTCAACT +
Preference number: 1 (lower is better)
Translates to: PQMGSANRCNFGDAK*GKSHISALYTLYST
Trigger: AGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCTTTTGCCCCACTTTGCATCTCCAAAATTACAACGGTTGGCCGATCCCATTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp TGTCGGTATGTGCTCATTTCAGTCAGTCAGTCACTTTTAAATACATaGGTGTACACAAACCTCCCCTCAGCCCTTCGCTTCTCCACAAGT +
Preference number: 1 (lower is better)
Translates to: CRYVLISVSQSLLNT*VYTNLPSALRFSTS
Trigger: ACTTGTGGAGAAGCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACTGACTGAAATGAGCACATACCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp CAGCAACGGTCTTTGGAGTTTGGCCTACTGGCTGCCACCCTAAAGTaGGAGATAAAACTCTGGAATCTATCTTGTATCTGTTGGCCAAAT +
Preference number: 1 (lower is better)
Translates to: QQRSLEFGLLAATLK*EIKLWNLSCICWPN
Trigger: ATTTGGCCAACAGATACAAGATAGATTCCAGAGTTTTATCTCCCACTTTAGGGTGGCAGCCAGTAGGCCAAACTCCAAAGACCGTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 90 bp GAGTTTGGCCTACTGGCTGCCACCCTAAAGTGGGAGATAAAACTCTaGAATCTATCTTGTATCTGTTGGCCAAATTGCTTAATTCCTTCC +
Preference number: 1 (lower is better)
Translates to: EFGLLAATLKWEIKL*NLSCICWPNCLIPS
Trigger: GGAAGGAATTAAGCAATTTGGCCAACAGATACAAGATAGATTCCAGAGTTTTATCTCCCACTTTAGGGTGGCAGCCAGTAGGCCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 90 bp AGTTCAGACAGCTGCGATGAAGGATTAGTTGTGGGTTTTTCTCAGTaGCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTATT +
Preference number: 1 (lower is better)
Translates to: SSDSCDEGLVVGFSQ*LATNCVAVPCSDTI
Trigger: AATAGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACCCACAACTAATCCTTCATCGCAGCTGTCTGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCCCGGCATCCCGTGGGTaGAGGCCATCTCCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: SGARICGCSRAGPRRKTLPASRG*RPSPPA
Trigger: TGCTGGGGGAGATGGCCTTCACCCACGGGATGCCGG...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp GCCACAAGGAGTATCTTTAGACCCTTCCCAGCGGGTGCCTCCTGTTaGGATGCCCTGAGTGGCAATGGGGCTGGACAGATGCCCCACCAC +
Preference number: 2 (lower is better)
Translates to: ATRSIFRPFPAGASC*DALSGNGAGQMPHH
Trigger: GTGGTGGGGCATCTGTCCAGCCCCATTGCCACTCAGGGCATCCAAACAGGAGGCACCCGCTGGGAAGGGTCTAAAGATACTCCTTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CCA 90 bp GCAAAGCCGGGCTGTCATGGTGTCCTCTTTCAGGGAGATGTCATGGGCACAGGCGAGTGGCAATGGGGCTaGACAGATGCCCCACCACGA +
Preference number: 2 (lower is better)
Translates to: AKPGCHGVLFQGDVMGTGEWQWG*TDAPPR
Trigger: TCGTGGTGGGGCATCTGTCCAGCCCCATTGCCACTC...GCCTGTGCCCATGACATCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CCA 90 bp GCAAAGCCGGGCTGTCATGGTGTCCTCTTTCAGGGAGATGTCATGGGCACAGGCTGCCCTGAGTGGCAATaGGGCTGGACAGATGCCCCA +
Preference number: 2 (lower is better)
Translates to: AKPGCHGVLFQGDVMGTGCPEWQ*GWTDAP
Trigger: TGGGGCATCTGTCCAGCCCCATTGCCACTCAGGGCA...GCCTGTGCCCATGACATCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp TCTCCCCCAGCAGGAAGCCACGTAAGATCTGACGCATCGCTGGGATaGGGGGCTGCTGTGGACACGGTGCATCCACCAGTAATAACACTG +
Preference number: 2 (lower is better)
Translates to: SPPAGSHVRSDASLG*GAAVDTVHPPVITL
Trigger: CAGTGTTATTACTGGTGGATGCACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTCAGATCTTACGTGGCTTCCTGCTGGGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGACACCCAACCCTGCCTaGGTCCCTGTGGACGTCGGC +
Preference number: 2 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPTPNPA*VPVDVG
Trigger: GCCGACGTCCACAGGGACCCAGGCAGGGTTGGGTGT...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp AACACTGACTCCTCGGGCCAAACACCCCCGCTGGGAGTACAGATTTaGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTGGTAGGGGA +
Preference number: 2 (lower is better)
Translates to: NTDSSGQTPPLGVQI*WTWATSAQDRSGRG
Trigger: TCCCCTACCACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGGGGGTGTTTGGCCCGAGGAGTCAGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp AGCCACGTAAGATCTGACGCATCGCTGGGATTGGGGGCTGCTGTGGACACGGTGGAGAACTCTCCACTTTaGTTTGCAGCCAGAACCTCC +
Preference number: 2 (lower is better)
Translates to: SHVRSDASLGLGAAVDTVENSPL*FAARTS
Trigger: GGAGGTTCTGGCTGCAAATCAAAGTGGAGAGTTCTC...CACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTCAGATCTTACGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCGGCACAGAGGTGGAGTaGGTCACAACACCCAACCCT +
Preference number: 2 (lower is better)
Translates to: SGARICGCSRAGPRRKTLGTEVE*VTTPNP
Trigger: AGGGTTGGGTGTTGTGACTCACTCCACCTCTGTGCC...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp GTTCAAACCCTCCAGTGGTTCCCATCTCACTTAGCAGAAGCCAAGGCCCTCCACCCAAGAGGCGGAGGTTaGAGTGAGCTGAGAACGTGC +
Preference number: 2 (lower is better)
Translates to: VQTLQWFPSHLAEAKALHPRGGG*SELRTC
Trigger: GCACGTTCTCAGCTCACTGCAACCTCCGCCTCTTGG...GTGGAGGGCCTTGGCTTCTGCTAAGTGAGATGGGAACCACTGGAGGGTTTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCTGCCTCCTGTTTGGATaGCCTGAGTGGCAATGGGGC +
Preference number: 2 (lower is better)
Translates to: SGARICGCSRAGPRRKTLCLLFG*PEWQWG
Trigger: GCCCCATTGCCACTCAGGGCATCCAAACAGGAGGCA...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CCA 90 bp AGCCACGTAAGATCTGACGCATCGCTGGGATTGGGGGCTGCTGTGGACACGGTGGAGGTATCAACAGCCTaGGCTGTTGGGAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: SHVRSDASLGLGAAVDTVEVSTA*AVGKRT
Trigger: TGTCCTTTTCCCAACAGCCCAGGCTGTTGATACCTC...CACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTCAGATCTTACGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCTCTTGTGCAGGTGAGTaGGGACGTGGTGTCAGAAGG +
Preference number: 2 (lower is better)
Translates to: SGARICGCSRAGPRRKTLSCAGE*GRGVRR
Trigger: CCTTCTGACACCACGTCCTCACTCACCTGCACAAGA...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp GTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGCAGCTTCCATTCTACCCCTaGCCACGACTCTGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: VPVDVGFHFLTQLGRTLQLPFYP*PRLCLV
Trigger: GACCAAGCAGAGTCGTGGGCAGGGGTAGAATGGAAG...CTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCTCTTGCCTTCAACCCTaGAGGGGCCCAACTACACAA +
Preference number: 2 (lower is better)
Translates to: SGARICGCSRAGPRRKTLSCLQP*RGPTTQ
Trigger: TTGTGTAGTTGGGCCCCTCCAGGGTTGAAGGCAAGA...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp GGCTCTTCCAAGAAGCACACTCAGGGAGGTGTTGGGTTGAGGTCATaGAGTGCAGCCTGCACACCAGGGTTTCATGGTAGGTTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: GSSKKHTQGGVGLRS*SAACTPGFHGRFGR
Trigger: TCTTCCAAACCTACCATGAAACCCTGGTGTGCAGGCTGCACTCAATGACCTCAACCCAACACCTCCCTGAGTGTGCTTCTTGGAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTCACATCCTGTTCCTCTaGCTGGAATGCCTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: PLGVQILWTWATSAQDRSHILFL*LECLVQ
Trigger: CTGGACAAGGCATTCCAGGCAGAGGAACAGGATGTG...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp GTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGCAGAGGGGAGTTCACAGCTaGTGGGCACACTATTTACAG +
Preference number: 2 (lower is better)
Translates to: VPVDVGFHFLTQLGRTLQRGVHS*WAHYLQ
Trigger: CTGTAAATAGTGTGCCCAGCAGCTGTGAACTCCCCT...CTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp CCATTTCCCAGAGAGCCCAAGGGCTCCATCCATGGCTCTTTTCTGTaGCTTCTCAGTAATACTCAGAGACAATCTCAGTGGCCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: PFPREPKGSIHGSFL*LLSNTQRQSQWPLQ
Trigger: CTGGAGGGGCCACTGAGATTGTCTCTGAGTATTACTGAGAAGCAACAGAAAAGAGCCATGGATGGAGCCCTTGGGCTCTCTGGGAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTAGAATCTGTGTTTCCTaGACGCCAAGAGGAAGTCTC +
Preference number: 2 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLRICVS*TPRGSL
Trigger: GAGACTTCCTCTTGGCGTTCAGGAAACACAGATTCT...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
3UTR-3UTR TCA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTGGCAGATGGATCATCTaGAGTCAAGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: PLGVQILWTWATSAQDRSGRWII*SQEFET
Trigger: GGTCTCGAACTCTTGACTTCAGATGATCCATCTGCC...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp GTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGCAGTCTCAGTCCTTTGGCTaGTTTCCCATTTCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: VPVDVGFHFLTQLGRTLQSQSFG*FPISQR
Trigger: TCTCTGGGAAATGGGAAATCAGCCAAAGGACTGAGA...CTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp ACTCGCTGGGTCCCCCACTACTTTCTAGTCCTGTCTCATCACCCTCTTCCCCACCTTCCCTCTTCCTTCTaGCCTTGTCCACTAAAGTTT +
Preference number: 2 (lower is better)
Translates to: TRWVPHYFLVLSHHPLPHLPSSF*PCPLKF
Trigger: AAACTTTAGTGGACAAGGGCAGAAGGAAGAGGGAAG...GTGGGGAAGAGGGTGATGAGACAGGACTAGAAAGTAGTGGGGGACCCAGCGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp ACTCGCTGGGTCCCCCACTACTTTCTAGTCCTGTCTCATCACCCTCTTCCCCACCAACCACAGACAGCCTaGTTTGCACCAAATTCCATA +
Preference number: 2 (lower is better)
Translates to: TRWVPHYFLVLSHHPLPHQPQTA*FAPNSI
Trigger: TATGGAATTTGGTGCAAAGCAGGCTGTCTGTGGTTG...GTGGGGAAGAGGGTGATGAGACAGGACTAGAAAGTAGTGGGGGACCCAGCGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp GCAAAGCCGGGCTGTCATGGTGTCCTCTTTCAGGGAGATGTCATGGGCACAGGCAAGAGTTCAGACAGCTaGGATGAAGGATTAGTTGTG +
Preference number: 2 (lower is better)
Translates to: AKPGCHGVLFQGDVMGTGKSSDS*DEGLVV
Trigger: CACAACTAATCCTTCATCGCAGCTGTCTGAACTCTT...GCCTGTGCCCATGACATCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CCA 90 bp AGTCAGTCACTTTTAAATACATGGGTGTACACAAACCTCCCCTCAGCCCTTCGCCAGAGACAATCTCAGTaGCCCCTCCAGCTGCATGGC +
Preference number: 2 (lower is better)
Translates to: SQSLLNTWVYTNLPSALRQRQSQ*PLQLHG
Trigger: GCCATGCAGCTGGAGGGGCCACTGAGATTGTCTCTG...GCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCCAAGGGCTCCATCCATaGCTCTTTTCTGTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: SGARICGCSRAGPRRKTLQGLHP*LFSVAS
Trigger: AGAAGCAACAGAAAAGAGCCATGGATGGAGCCCTTG...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp CCTTCTGAGAGCACCCCCAACAATAAACCAAGTGCATTCAGATCCCTGTCTCGAGTAAAGAGAAGGCTCTaGGGTATCAACAGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: PSESTPNNKPSAFRSLSRVKRRL*GINSLG
Trigger: GCCCAGGCTGTTGATACCTCAGAGCCTTCTCTTTAC...TCGAGACAGGGATCTGAATGCACTTGGTTTATTGTTGGGGGTGCTCTCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CCA 90 bp GCAAAGCCGGGCTGTCATGGTGTCCTCTTTCAGGGAGATGTCATGGGCACAGGCTCACTTTTAAATACATaGGTGTACACAAACCTCCCC +
Preference number: 2 (lower is better)
Translates to: AKPGCHGVLFQGDVMGTGSLLNT*VYTNLP
Trigger: GGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGA...GCCTGTGCCCATGACATCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCTGTCTCGAGCTCTGCTaGAGACCTGACCTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSCLELC*RPDLRE
Trigger: TTCTCTCAGGTCAGGTCTGCAGCAGAGCTCGAGACA...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp ATTGCAGGAAAAGTCTTGTTTCCCAAACGCTGTGCCTTTCTCCTCTaGCCTTCAACCCTGGAGGGGCCCAACTACACAAGTGGCTTATTT +
Preference number: 2 (lower is better)
Translates to: IAGKVLFPKRCAFLL*PSTLEGPNYTSGLF
Trigger: AAATAAGCCACTTGTGTAGTTGGGCCCCTCCAGGGTTGAAGGCAAGAGGAGAAAGGCACAGCGTTTGGGAAACAAGACTTTTCCTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp ACTAACCCAAAGAGGGGAGGCAGAAAAAGACATCAGCAACGGTCTTaGGAGTTTGGCCTACTGGCTGCCACCCTAAAGTGGGAGATAAAA +
Preference number: 2 (lower is better)
Translates to: TNPKRGGRKRHQQRS*EFGLLAATLKWEIK
Trigger: TTTTATCTCCCACTTTAGGGTGGCAGCCAGTAGGCCAAACTCCAAAGACCGTTGCTGATGTCTTTTTCTGCCTCCCCTCTTTGGGTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGTGCAGCAGAATTGCTTaGACCCAAGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRCSRIA*TQEAEV
Trigger: AACCTCCGCCTCTTGGGTTCAAGCAATTCTGCTGCA...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
3UTR-3UTR GCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACACTGAGAACGTGCCATTaGACTCCAGCCTGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTLRTCH*TPAWAR
Trigger: TCTTGCCCAGGCTGGAGTGCAATGGCACGTTCTCAG...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
3UTR-3UTR GCA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTTCAACTGAAGTCACTTaGCTTCAAATGTACCCACAC +
Preference number: 2 (lower is better)
Translates to: PLGVQILWTWATSAQDRSSTEVT*LQMYPH
Trigger: GTGTGGGTACATTTGAAGGCAAGTGACTTCAGTTGA...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp TCTTGCCTTCAACCCTGGAGGGGCCCAACTACACAAGTGGCTTATTaGGAGAAGGGAATGAGGTTGAATAAAGAAAGCTCAGCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: SCLQPWRGPTTQVAY*EKGMRLNKESSASR
Trigger: TCTGGAAGCTGAGCTTTCTTTATTCAACCTCATTCCCTTCTCCAAATAAGCCACTTGTGTAGTTGGGCCCCTCCAGGGTTGAAGGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGAGAATCTGTGTTTCCTaGACGCCAAGAGGAAGTCTC +
Preference number: 2 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGRICVS*TPRGSL
Trigger: GAGACTTCCTCTTGGCGTTCAGGAAACACAGATTCT...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
3UTR-3UTR TCA 90 bp ATGACTGATAAAGGCTTTCACAGGTTCCTTCTGAGAGCACCCCCAACAATAAACTGCAGCAGAATTGCTTaGACCCAAGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: MTDKGFHRFLLRAPPTINCSRIA*TQEAEV
Trigger: AACCTCCGCCTCTTGGGTTCAAGCAATTCTGCTGCA...GTTTATTGTTGGGGGTGCTCTCAGAAGGAACCTGTGAAAGCCTTTATCAGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp GGTTTTTCTCAGTGCCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTAAGGACACTGCAGCCTaGGGCTATAAGGGGAGTTCA +
Preference number: 2 (lower is better)
Translates to: GFSQCLATNCVAVPCSDTKDTAA*GYKGSS
Trigger: TGAACTCCCCTTATAGCCTCAGGCTGCAGTGTCCTT...AGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGCCTAATAAGAACTCCTaGAAGCACACATTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPPNKNS*KHTFPS
Trigger: GGAAGGAAATGTGTGCTTTCAGGAGTTCTTATTAGG...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCCTCTCCACTTTGATTTaGAGCCAGAACCTCCCATTC +
Preference number: 2 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSLSTLI*SQNLPF
Trigger: GAATGGGAGGTTCTGGCTGCAAATCAAAGTGGAGAG...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CCA 90 bp GGTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACGAGGTATCAACAGCCTaGGCTGTTGGGAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: GKKGSYEHGEDKCEHEEDEVSTA*AVGKRT
Trigger: TGTCCTTTTCCCAACAGCCCAGGCTGTTGATACCTC...GTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
3UTR-3UTR GCA 90 bp AGTGTTCCACCCCAATTAACCACCATTACACAAAAACCCAAACACTCTATCCTTCTGAGAACGTGCCATTaGACTCCAGCCTGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: SVPPQLTTITQKPKHSILLRTCH*TPAWAR
Trigger: TCTTGCCCAGGCTGGAGTGCAATGGCACGTTCTCAG...AAGGATAGAGTGTTTGGGTTTTTGTGTAATGGTGGTTAATTGGGGTGGAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp AGTGTTCCACCCCAATTAACCACCATTACACAAAAACCCAAACACTCTATCCTTCTCACTTTGGGGCAGTaGACATCCTGTTCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: SVPPQLTTITQKPKHSILLTLGQ*TSCSSA
Trigger: GGCAGAGGAACAGGATGTGCACTGCCCCAAAGTGAG...AAGGATAGAGTGTTTGGGTTTTTGTGTAATGGTGGTTAATTGGGGTGGAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp GGTTTTTCTCAGTGCCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTATGGTAGCTGCCAGATaGCTACAGCCTCTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: GFSQCLATNCVAVPCSDTMVAAR*LQPLFQ
Trigger: CTGGAAAAGAGGCTGTAGGCATCTGGCAGCTACCAT...AGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp CACTCTACACTCTCTACTCAACTTGTTTTTCAGTGGGTGCTAGAATaGGTACAAGTCAGACCAAGTGAAGACCATTGTGAGGCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: HSTLSTQLVFQWVLE*VQVRPSEDHCEAGE
Trigger: TTCTCCAGCCTCACAATGGTCTTCACTTGGTCTGACTTGTACCAATTCTAGCACCCACTGAAAAACAAGTTGAGTAGAGAGTGTAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp GGTTTTTCTCAGTGCCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTTCTTACTCCCTCCCCTaGTTTATTTTTCTCCACAGC +
Preference number: 2 (lower is better)
Translates to: GFSQCLATNCVAVPCSDTSYSLP*FIFLHS
Trigger: GCTGTGGAGAAAAATAAAGCAGGGGAGGGAGTAAGA...AGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR TCA 90 bp ATGACTGATAAAGGCTTTCACAGGTTCCTTCTGAGAGCACCCCCAACAATAAACTTCCCTGTTATTCTGTaGAGTATCTCTAGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: MTDKGFHRFLLRAPPTINFPVIL*SISSSQ
Trigger: CTGGGAACTAGAGATACTTCACAGAATAACAGGGAA...GTTTATTGTTGGGGGTGCTCTCAGAAGGAACCTGTGAAAGCCTTTATCAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp ACTGGCTGCCACCCTAAAGTGGGAGATAAAACTCTGGAATCTATCTaGTATCTGTTGGCCAAATTGCTTAATTCCTTCCTATTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: TGCHPKVGDKTLESI*YLLAKLLNSFLFSS
Trigger: AGAAGAGAATAGGAAGGAATTAAGCAATTTGGCCAACAGATACAAGATAGATTCCAGAGTTTTATCTCCCACTTTAGGGTGGCAGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR GCA 90 bp AGTGTTCCACCCCAATTAACCACCATTACACAAAAACCCAAACACTCTATCCTTCAAAAGCCACATTTCTaGACTCTACACTCTCTACTC +
Preference number: 2 (lower is better)
Translates to: SVPPQLTTITQKPKHSILQKPHF*TLHSLL
Trigger: GAGTAGAGAGTGTAGAGTGCAGAAATGTGGCTTTTG...AAGGATAGAGTGTTTGGGTTTTTGTGTAATGGTGGTTAATTGGGGTGGAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 90 bp CACCCTAAAGTGGGAGATAAAACTCTGGAATCTATCTTGTATCTGTaGGCCAAATTGCTTAATTCCTTCCTATTCTCTTCTTGTAAAATG +
Preference number: 2 (lower is better)
Translates to: HPKVGDKTLESILYL*AKLLNSFLFSSCKM
Trigger: CATTTTACAAGAAGAGAATAGGAAGGAATTAAGCAATTTGGCCAACAGATACAAGATAGATTCCAGAGTTTTATCTCCCACTTTAGGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp AGCGGGTGCCTCCTGTTTGGATGCCCTGAGTGGCAATaGGGCTGGACAGATGCCCCACCACGATGGGCGGCC +
Preference number: 3 (lower is better)
Translates to: SGCLLFGCPEWQ*GWTDAPPRWAA
Trigger: GGCCGCCCATCGTGGTGGGGCATCTGTCCAGCCCCATTGCCACTCAGGGCATCCAAACAGGAGGCACCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp CATGCTGATGGTTCAGTAGGGGGCGCTGTGGTGCCCTaGCAGATCCCTTCACACAGCCAGTGCCCAGGACCC +
Preference number: 3 (lower is better)
Translates to: HADGSVGGAVVP*QIPSHSQCPGP
Trigger: GGGTCCTGGGCACTGGCTGTGTGAAGGGATCTGGCAGGGCACCACAGCGCCCCCTACTGAACCATCAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp CTTCCCAGCGGGTGCCTCCTGTTTGGATGCCCTGAGTaGCAATGGGGCTGGACAGATGCCCCACCACGATGG +
Preference number: 3 (lower is better)
Translates to: LPSGCLLFGCPE*QWGWTDAPPRW
Trigger: CCATCGTGGTGGGGCATCTGTCCAGCCCCATTGCCACTCAGGGCATCCAAACAGGAGGCACCCGCTGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp CAGACTCAGGAATCCCGGAGCAGGGCGTCCACTCGCTaGGTCCCCCACTACTTTCTAGTCCTGTCTCATCAC +
Preference number: 3 (lower is better)
Translates to: QTQESRSRASTR*VPHYFLVLSHH
Trigger: GTGATGAGACAGGACTAGAAAGTAGTGGGGGACCCAGCGAGTGGACGCCCTGCTCCGGGATTCCTGAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp GTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGCAGGCTGAGAACGTGCCATaGCACTCCAGCCTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: VPVDVGFHFLTQLGRTLQAENVP*HSSLGK
Trigger: CTTGCCCAGGCTGGAGTGCAATGGCACGTTCTCAGC...CTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp GGGCACAGAGGTGGAGTGAGTCACAACACCCAACCCTaGCTGGGTCCCTGTGGACGTCGGCTTTCATTTTCT +
Preference number: 3 (lower is better)
Translates to: GHRGGVSHNTQP*LGPCGRRLSFS
Trigger: AGAAAATGAAAGCCGACGTCCACAGGGACCCAGGCAGGGTTGGGTGTTGTGACTCACTCCACCTCTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp CCCCAGGCTCACAAGACAAGGACCCAACAGTACCTCTaGAGGGCACAGAGGTGGAGTGAGTCACAACACCCA +
Preference number: 3 (lower is better)
Translates to: PQAHKTRTQQYL*RAQRWSESQHP
Trigger: TGGGTGTTGTGACTCACTCCACCTCTGTGCCCTGCAGAGGTACTGTTGGGTCCTTGTCTTGTGAGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp ACTTCAGCCCAAGACAGAAGTGGTAGGGGACTGTCCTaGGTGGGTACCCTCAAAGGAGAACCTGATGCAGGG +
Preference number: 3 (lower is better)
Translates to: TSAQDRSGRGLS*VGTLKGEPDAG
Trigger: CCCTGCATCAGGTTCTCCTTTGAGGGTACCCACCCAGGACAGTCCCCTACCACTTCTGTCTTGGGCTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp TCGGGCCAAACACCCCCGCTGGGAGTACAGATTTTGTaGACGTGGGCAACTTCAGCCCAAGACAGAAGTGGT +
Preference number: 3 (lower is better)
Translates to: SGQTPPLGVQIL*TWATSAQDRSG
Trigger: ACCACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGGGGGTGTTTGGCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp CAGGGAGGTGTTGGGTTGAGGTCATTGAGTGCAGCCTaGACACCAGGGTTTCATGGTAGGTTTGGAAGACCC +
Preference number: 3 (lower is better)
Translates to: QGGVGLRSLSAA*TPGFHGRFGRP
Trigger: GGGTCTTCCAAACCTACCATGAAACCCTGGTGTGCAGGCTGCACTCAATGACCTCAACCCAACACCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp AGTGAGTCACAACACCCAACCCTGCCTGGGTCCCTGTaGACGTCGGCTTTCATTTTCTCACACAGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: SESQHPTLPGSL*TSAFIFSHSWE
Trigger: TTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGACCCAGGCAGGGTTGGGTGTTGTGACTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCATGCAGCAGAATTGCTaGAACCCAAGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: SGARICGCSRAGPRRKTLMQQNC*NPRGGG
Trigger: ACCTCCGCCTCTTGGGTTCAAGCAATTCTGCTGCAT...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp GCAAAGCCGGGCTGTCATGGTGTCCTCTTTCAGGGAGATGTCATGGGCACAGGCCCAACCGTTGTAATTTaGGAGATGCAAAGTGGGGCA +
Preference number: 3 (lower is better)
Translates to: AKPGCHGVLFQGDVMGTGPTVVI*EMQSGA
Trigger: TGCCCCACTTTGCATCTCCAAAATTACAACGGTTGG...GCCTGTGCCCATGACATCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGTGTGCCTTTCTCCTCTaGCCTTCAACCCTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPCAFLL*PSTLEG
Trigger: CCCCTCCAGGGTTGAAGGCAAGAGGAGAAAGGCACA...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR TCA 72 bp TCATTTTCTCACACAGCTGGGAAGGACACTGCAGCCTaGGGCTATAAGGGGAGTTCACAGCTGCTGGGCACA +
Preference number: 3 (lower is better)
Translates to: SFSHTAGKDTAA*GYKGSSQLLGT
Trigger: TGTGCCCAGCAGCTGTGAACTCCCCTTATAGCCTCAGGCTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp ACCCCCAACACACTACCATGCATGGTAGCTGCCAGATaGCTACAGCCTCTTTTCCAGAGACTTGCCCTCAAC +
Preference number: 3 (lower is better)
Translates to: TPNTLPCMVAAR*LQPLFQRLALN
Trigger: GTTGAGGGCAAGTCTCTGGAAAAGAGGCTGTAGGCATCTGGCAGCTACCATGCATGGTAGTGTGTTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp ACACTGCAGCCTGAGGCTATAAGGGGAGTTCACAGCTaGTGGGCACACTATTTACAGACTCAGGAATCCCGG +
Preference number: 3 (lower is better)
Translates to: TLQPEAIRGVHS*WAHYLQTQESR
Trigger: CCGGGATTCCTGAGTCTGTAAATAGTGTGCCCAGCAGCTGTGAACTCCCCTTATAGCCTCAGGCTGCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp CCAAACGCTGTGCCTTTCTCCTCTTGCCTTCAACCCTaGAGGGGCCCAACTACACAAGTGGCTTATTTGGAG +
Preference number: 3 (lower is better)
Translates to: PNAVPFSSCLQP*RGPTTQVAYLE
Trigger: CTCCAAATAAGCCACTTGTGTAGTTGGGCCCCTCCAGGGTTGAAGGCAAGAGGAGAAAGGCACAGCGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp GTAATAACACTGACTCCTCGGGCCAAACACCCCCGCTaGGAGTACAGATTTTGTGGACGTGGGCAACTTCAG +
Preference number: 3 (lower is better)
Translates to: VITLTPRAKHPR*EYRFCGRGQLQ
Trigger: CTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGGGGGTGTTTGGCCCGAGGAGTCAGTGTTATTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp GCAAAGCCGGGCTGTCATGGTGTCCTCTTTCAGGGAGATGTCATGGGCACAGGCACACAAGTGGCTTATTaGGAGAAGGGAATGAGGTTG +
Preference number: 3 (lower is better)
Translates to: AKPGCHGVLFQGDVMGTGTQVAY*EKGMRL
Trigger: CAACCTCATTCCCTTCTCCAAATAAGCCACTTGTGT...GCCTGTGCCCATGACATCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp TGCAGACCTGACCTGAGAGAACTCTCCACTTTGATTTaGAGCCAGAACCTCCCATTCCAACCACAGACAGCC +
Preference number: 3 (lower is better)
Translates to: CRPDLRELSTLI*SQNLPFQPQTA
Trigger: GGCTGTCTGTGGTTGGAATGGGAGGTTCTGGCTGCAAATCAAAGTGGAGAGTTCTCTCAGGTCAGGTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGCTGAGAACGTGCCATaGCACTCCAGCCTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRAENVP*HSSLGK
Trigger: CTTGCCCAGGCTGGAGTGCAATGGCACGTTCTCAGC...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
3UTR TCA 72 bp CTCCCCTCAGCCCTTCGCTTCTCCACAAGTCAAGTGTaGACAGTAGCAGTGGCCACAAGGAGTATCTTTAGA +
Preference number: 3 (lower is better)
Translates to: LPSALRFSTSQV*TVAVATRSIFR
Trigger: TCTAAAGATACTCCTTGTGGCCACTGCTACTGTTCACACTTGACTTGTGGAGAAGCGAAGGGCTGAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp AATCAATCAAGGCACTCCTCTGTTCAAACCCTCCAGTaGTTCCCATCTCACTTAGCAGAAGCCAAGGCCCTC +
Preference number: 3 (lower is better)
Translates to: NQSRHSSVQTLQ*FPSHLAEAKAL
Trigger: GAGGGCCTTGGCTTCTGCTAAGTGAGATGGGAACCACTGGAGGGTTTGAACAGAGGAGTGCCTTGATTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp GACGCATCGCTGGGATTGGGGGCTGCTGTGGACACGGTGCATCCACCAGTAATAATTTATTCCTATGTATaGGCTATCTCTTTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: DASLGLGAAVDTVHPPVIIYSYV*AISFSL
Trigger: CAGGGAGAAAGAGATAGCCAATACATAGGAATAAAT...TATTACTGGTGGATGCACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR TCA 72 bp TGCCTACAGCCTCTTTTCCAGAGACTTGCCCTCAACTaGAGTCACTTGCCTTCAAATGTACCCACACTCCCA +
Preference number: 3 (lower is better)
Translates to: CLQPLFQRLALN*SHLPSNVPTLP
Trigger: TGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGTTGAGGGCAAGTCTCTGGAAAAGAGGCTGTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR TCA 72 bp TCTGACCTTAAGGTAACTCCTTCTCAGTCCTTTGGCTaGTTTCCCATTTCCCAGAGAGCCCAAGGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: SDLKVTPSQSFG*FPISQRAQGLH
Trigger: ATGGAGCCCTTGGGCTCTCTGGGAAATGGGAAATCAGCCAAAGGACTGAGAAGGAGTTACCTTAAGGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp ATAAACCAAGTGCATTCAGATCCCTGTCTCGAGCTCTaGTGCAGACCTGACCTGAGAGAACTCTCCACTTTG +
Preference number: 3 (lower is better)
Translates to: INQVHSDPCLEL*CRPDLRELSTL
Trigger: CAAAGTGGAGAGTTCTCTCAGGTCAGGTCTGCAGCAGAGCTCGAGACAGGGATCTGAATGCACTTGGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp AGCTGCCAGATGCCTACAGCCTCTTTTCCAGAGACTTaGCCTCAACTGAAGTCACTTGCCTTCAAATGTACC +
Preference number: 3 (lower is better)
Translates to: SCQMPTASFPET*PQLKSLAFKCT
Trigger: GGTACATTTGAAGGCAAGTGACTTCAGTTGAGGGCAAGTCTCTGGAAAAGAGGCTGTAGGCATCTGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp GGTTTTTCTCAGTGCCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTGTTGGGTTGAGGTCATaGAGTGCAGCCTGCACACCA +
Preference number: 3 (lower is better)
Translates to: GFSQCLATNCVAVPCSDTVGLRS*SAACTP
Trigger: TGGTGTGCAGGCTGCACTCAATGACCTCAACCCAAC...AGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR TCA 72 bp GGGATGGCAGATGATCAAGAGTTCAGACAGCTGCGATaGAGGATTAGTTGTGGGTTTTTCTCAGTGCCTTGC +
Preference number: 3 (lower is better)
Translates to: GMADDQEFRQLR*RISCGFFSVPC
Trigger: GCAAGGCACTGAGAAAAACCCACAACTAATCCTTCATCGCAGCTGTCTGAACTCTTGATCATCTGCCATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp GTAATACTCAGAGACAATCTCAGTGGCCCCTCCAGCTaGATGGCTTTAAATGCCACTGACATGCTGATGGTT +
Preference number: 3 (lower is better)
Translates to: VILRDNLSGPSS*MALNATDMLMV
Trigger: AACCATCAGCATGTCAGTGGCATTTAAAGCCATGCAGCTGGAGGGGCCACTGAGATTGTCTCTGAGTATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp ACATCAGCAACGGTCTTTGGAGTTTGGCCTACTGGCTaGCACCCTAAAGTGGGAGATAAAACTCTGGAATCT +
Preference number: 3 (lower is better)
Translates to: TSATVFGVWPTG*HPKVGDKTLES
Trigger: AGATTCCAGAGTTTTATCTCCCACTTTAGGGTGGCAGCCAGTAGGCCAAACTCCAAAGACCGTTGCTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp GGATCGGCCAACCGTTGTAATTTTGGAGATGCAAAGTaGGGCAAAAGCCACATTTCTGCACTCTACACTCTC +
Preference number: 3 (lower is better)
Translates to: GSANRCNFGDAK*GKSHISALYTL
Trigger: GAGAGTGTAGAGTGCAGAAATGTGGCTTTTGCCCCACTTTGCATCTCCAAAATTACAACGGTTGGCCGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp CTCTTTTCCAGAGACTTGCCCTCAACTGAAGTCACTTaGCTTCAAATGTACCCACACTCCCAGAGAACTTCT +
Preference number: 3 (lower is better)
Translates to: LFSRDLPSTEVT*LQMYPHSQRTS
Trigger: AGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGTTGAGGGCAAGTCTCTGGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp TTTGGGGGATGGCAGATGATCAAGAGTTCAGACAGCTaGGATGAAGGATTAGTTGTGGGTTTTTCTCAGTGC +
Preference number: 3 (lower is better)
Translates to: FGGWQMIKSSDS*DEGLVVGFSQC
Trigger: GCACTGAGAAAAACCCACAACTAATCCTTCATCGCAGCTGTCTGAACTCTTGATCATCTGCCATCCCCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp GGGTCAAAGGACAAGCAAGGCATCTTAGAGCAGGCCTaGAAGCTCCCACAAAGCTTACAAATGTGTTTGTTT +
Preference number: 3 (lower is better)
Translates to: GSKDKQGILEQA*KLPQSLQMCLF
Trigger: AAACAAACACATTTGTAAGCTTTGTGGGAGCTTCCAGGCCTGCTCTAAGATGCCTTGCTTGTCCTTTGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp GTGCTCATTTCAGTCAGTCAGTCACTTTTAAATACATaGGTGTACACAAACCTCCCCTCAGCCCTTCGCTTC +
Preference number: 3 (lower is better)
Translates to: VLISVSQSLLNT*VYTNLPSALRF
Trigger: GAAGCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACTGACTGAAATGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp ATGACTGATAAAGGCTTTCACAGGTTCCTTCTGAGAGCACCCCCAACAATAAACCAGTGGGTGCTAGAATaGGTACAAGTCAGACCAAGT +
Preference number: 3 (lower is better)
Translates to: MTDKGFHRFLLRAPPTINQWVLE*VQVRPS
Trigger: ACTTGGTCTGACTTGTACCAATTCTAGCACCCACTG...GTTTATTGTTGGGGGTGCTCTCAGAAGGAACCTGTGAAAGCCTTTATCAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp ATTCATTCAACAAGCAACGAAAGCCAGCTATTTGTGTaGGGACAGTGTCAGGTGCAAGGATATGTGGCTGTT +
Preference number: 3 (lower is better)
Translates to: IHSTSNESQLFV*GQCQVQGYVAV
Trigger: AACAGCCACATATCCTTGCACCTGACACTGTCCCCACACAAATAGCTGGCTTTCGTTGCTTGTTGAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR GCA 72 bp CCAAACACTCTATCCTTTTATTCCTTCCCAGGCTATTaGAGGAAAAGTCTTGTTTCCCAAACGCTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: PNTLSFYSFPGY*RKSLVSQTLCL
Trigger: AAGGCACAGCGTTTGGGAAACAAGACTTTTCCTGCAATAGCCTGGGAAGGAATAAAAGGATAGAGTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp TCTTTGGAGTTTGGCCTACTGGCTGCCACCCTAAAGTaGGAGATAAAACTCTGGAATCTATCTTGTATCTGT +
Preference number: 3 (lower is better)
Translates to: SLEFGLLAATLK*EIKLWNLSCIC
Trigger: ACAGATACAAGATAGATTCCAGAGTTTTATCTCCCACTTTAGGGTGGCAGCCAGTAGGCCAAACTCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR-3UTR CAA 90 bp GGTTTTTCTCAGTGCCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTCATGGCTCTTTTCTGTaGCTTCTCAGTAATACTCAG +
Preference number: 3 (lower is better)
Translates to: GFSQCLATNCVAVPCSDTHGSFL*LLSNTQ
Trigger: CTGAGTATTACTGAGAAGCAACAGAAAAGAGCCATG...AGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CCA 72 bp CTACTGGCTGCCACCCTAAAGTGGGAGATAAAACTCTaGAATCTATCTTGTATCTGTTGGCCAAATTGCTTA +
Preference number: 3 (lower is better)
Translates to: LLAATLKWEIKL*NLSCICWPNCL
Trigger: TAAGCAATTTGGCCAACAGATACAAGATAGATTCCAGAGTTTTATCTCCCACTTTAGGGTGGCAGCCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCGGCTGGGCTGGGACTaGCGGAAGGCTGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLRLGWD*RKAGRP
Trigger: GGGCCTGCCAGCCTTCCGCCAGTCCCAGCCCAGCCG...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGACCTGCTTGCAGCGCTTaGGGCAGTGCGCGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGPACSA*GSARGA
Trigger: TGCGCCGCGCGCACTGCCTCAAGCGCTGCAAGCAGG...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAGATGCCCCACCACGATaGGCGGCCTCCCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGDAPPR*AASPPA
Trigger: GGCTGGTGGGGAGGCCGCCCATCGTGGTGGGGCATC...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GACGCATCGCTGGGATTGGGGGCTGCTGTGGACACGGTGCATCCACCAGTAATATGCCCTGAGTGGCAATaGGGCTGGACAGATGCCCCA +
Preference number: 4 (lower is better)
Translates to: DASLGLGAAVDTVHPPVICPEWQ*GWTDAP
Trigger: TGGGGCATCTGTCCAGCCCCATTGCCACTCAGGGCA...TATTACTGGTGGATGCACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGCAGACGCTCTCGGCCCAGTaGTCGCCGCTGTACTTGTCC +
Preference number: 4 (lower is better)
Translates to: VPVDVGFHFLTQLGRTLQTLSAQ*SPLYLS
Trigger: GGACAAGTACAGCGGCGAGCACTGGGCCGAGAGCGT...CTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGATCGCGCAGCAAGCGGTaGAGCCGCAGGCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGSRSKR*SRRLIS
Trigger: GGAGATCAGCCTGCGGCTGCACCGCTTGCTGCGCGA...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAGCTGCGGCGCGGCGCTaGAGTTGCGGTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERAAARR*SCGGRR
Trigger: CCTTCTGCCACCGCAACTGCAGCGCCGCGCCGCAGC...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGCAGCGCTTGAGGCAGTaGGCGCGGCGCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGQRLRQ*ARRSRP
Trigger: GGGCCTGCTGCGCCGCGCGCACTGCCTCAAGCGCTG...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAATGGGGCTGGACAGATaGCCCACCACGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGMGLDR*PTTMGG
Trigger: GCCGCCCATCGTGGTGGGGCATCTGTCCAGCCCCAT...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGGCAGCTCGGGATAGCTaGCGAGGCCGGCGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGAARDS*RGRRRA
Trigger: AGCCCGCCGCCGGCCTCGCCAGCTATCCCGAGCTGC...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp CTGGGCTGTTGGGAAAAGGACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAACCTGCTTGCAGCGCTTaGGGCAGTGCGCGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: LGCWEKDKESVFPERQEEPACSA*GSARGA
Trigger: TGCGCCGCGCGCACTGCCTCAAGCGCTGCAAGCAGG...TTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGTCCTTTTCCCAACAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp ACTCGCTGGGTCCCCCACTACTTTCTAGTCCTGTCTCATCACCCTCTTCCCCACGGCACAGAGGTGGAGTaGGTCACAACACCCAACCCT +
Preference number: 4 (lower is better)
Translates to: TRWVPHYFLVLSHHPLPHGTEVE*VTTPNP
Trigger: AGGGTTGGGTGTTGTGACTCACTCCACCTCTGTGCC...GTGGGGAAGAGGGTGATGAGACAGGACTAGAAAGTAGTGGGGGACCCAGCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAAAGGCTGGCAGGCCCTaGTTGCAGCGCTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGKAGRP*LQRLRQ
Trigger: CTGCCTCAAGCGCTGCAAGCAGGGCCTGCCAGCCTT...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp AAATCAATCAAGGCACTCCTCTGTTCAAACCCTCCAGTGGTTCCCATCTCACTTGCAGCTCGGGATAGCTaGCGAGGCCGGCGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: KSIKALLCSNPPVVPISLAARDS*RGRRRA
Trigger: AGCCCGCCGCCGGCCTCGCCAGCTATCCCGAGCTGC...AAGTGAGATGGGAACCACTGGAGGGTTTGAACAGAGGAGTGCCTTGATTGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAGGACTGGCGGAAGGCTaGCAGGCCCTGCTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERGLAEG*QALLAA
Trigger: CGCTGCAAGCAGGGCCTGCCAGCCTTCCGCCAGTCC...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp CTGGGCTGTTGGGAAAAGGACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAAGGTGCAGCCGCAGGCTaGTCTCCAGGTAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: LGCWEKDKESVFPERQEEGAAAG*SPGSPR
Trigger: GCGTGGGCTACCTGGAGATCAGCCTGCGGCTGCACC...TTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGTCCTTTTCCCAACAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCCCGGCATCCCGTGGGTaGAGGCCATCTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSPASRG*RPSPPA
Trigger: TGCTGGGGGAGATGGCCTTCACCCACGGGATGCCGG...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGACGTCCCGTGGGAAGCTaGGGAAGCTGTAGCGTTCGT +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGRPVGS*GSCSVR
Trigger: ACGAACGCTACAGCTTCCGCAGCTTCCCACGGGACG...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACACAGCGCTTGAGGCAGTaGGCGCGGCGCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTQRLRQ*ARRSRP
Trigger: GGGCCTGCTGCGCCGCGCGCACTGCCTCAAGCGCTG...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp GACGCATCGCTGGGATTGGGGGCTGCTGTGGACACGGTGCATCCACCAGTAATATGTCTCGAGCTCTGCTaGAGACCTGACCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: DASLGLGAAVDTVHPPVICLELC*RPDLRE
Trigger: TTCTCTCAGGTCAGGTCTGCAGCAGAGCTCGAGACA...TATTACTGGTGGATGCACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGCCACGTAAGATCTGACGCATCGCTGGGATTGGGGGCTGCTGTGGACACGGTGGTTTCCCAAACGCTGTaGCTTTCTCCTCTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SHVRSDASLGLGAAVDTVVSQTL*LSPLAF
Trigger: GAAGGCAAGAGGAGAAAGGCACAGCGTTTGGGAAAC...CACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTCAGATCTTACGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTCGGCTGGGCTGGGACTaGCGGAAGGCTGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFRLGWD*RKAGRP
Trigger: GGGCCTGCCAGCCTTCCGCCAGTCCCAGCCCAGCCG...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GGTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACCCAGCACCTCGCGGCTaGGCTGGGACTGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GKKGSYEHGEDKCEHEEDPAPRG*AGTGGR
Trigger: CCTTCCGCCAGTCCCAGCCCAGCCGCGAGGTGCTGG...GTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTAGGGCGTCCACTCGCTaGGTCCCCCACTACTTTCTA +
Preference number: 4 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLRASTR*VPHYFL
Trigger: TAGAAAGTAGTGGGGGACCCAGCGAGTGGACGCCCT...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp ACTCGCTGGGTCCCCCACTACTTTCTAGTCCTGTCTCATCACCCTCTTCCCCACCTGCCTGGGTCCCTGTaGACGTCGGCTTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: TRWVPHYFLVLSHHPLPHLPGSL*TSAFIF
Trigger: GAAAATGAAAGCCGACGTCCACAGGGACCCAGGCAG...GTGGGGAAGAGGGTGATGAGACAGGACTAGAAAGTAGTGGGGGACCCAGCGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp TCCTCGGGCCAAACACCCCCGCTGGGAGTACAGATTTaGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: SSGQTPPLGVQI*WTWATSAQDRS
Trigger: ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGGGGGTGTTTGGCCCGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp AGTATCTTTAGACCCTTCCCAGCGGGTGCCTCCTGTTaGGATGCCCTGAGTGGCAATGGGGCTGGACAGATG +
Preference number: 4 (lower is better)
Translates to: SIFRPFPAGASC*DALSGNGAGQM
Trigger: CATCTGTCCAGCCCCATTGCCACTCAGGGCATCCAAACAGGAGGCACCCGCTGGGAAGGGTCTAAAGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCAAAGAGCAGATAGCTaGCTGCACAGGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLQRADS*LHRGLH
Trigger: ATGCAGCCCCCTGTGCAGTCAGCTATCTGCTCTTTG...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGCTGCGGCGCGGCGCTaGAGTTGCGGTGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTAAARR*SCGGRR
Trigger: CCTTCTGCCACCGCAACTGCAGCGCCGCGCCGCAGC...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAGGAACCCTCGCAGGCTaGGAGACACTCGTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGGTLAG*ETLVKG
Trigger: GCCTTTTACGAGTGTCTCGCAGCCTGCGAGGGTTCC...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCTGAGAACGTGCCATTaGACTCCAGCCTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLLRTCH*TPAWAR
Trigger: TCTTGCCCAGGCTGGAGTGCAATGGCACGTTCTCAG...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp CCTTCTGAGAGCACCCCCAACAATAAACCAAGTGCATTCAGATCCCTGTCTCGACATGGGGATCAGTCTTaGCCCTGGGGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PSESTPNNKPSAFRSLSRHGDQS*PWGQAQ
Trigger: CTGTGCCTGCCCCCAGGGGCAAGACTGATCCCCATG...TCGAGACAGGGATCTGAATGCACTTGGTTTATTGTTGGGGGTGCTCTCAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTCATCAGCTCGTCCCGTaGGAAGCTGCGGAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PLGVQILWTWATSAQDRSHQLVP*EAAEAV
Trigger: TACAGCTTCCGCAGCTTCCCACGGGACGAGCTGATG...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp ATGACTGATAAAGGCTTTCACAGGTTCCTTCTGAGAGCACCCCCAACAATAAACACCTCGCGGCTGGGCTaGGACTGGCGGAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: MTDKGFHRFLLRAPPTINTSRLG*DWRKAG
Trigger: GCCAGCCTTCCGCCAGTCCCAGCCCAGCCGCGAGGT...GTTTATTGTTGGGGGTGCTCTCAGAAGGAACCTGTGAAAGCCTTTATCAGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAACCTCGCGGCTGGGCTaGGACTGGCGGAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTTSRLG*DWRKAG
Trigger: GCCAGCCTTCCGCCAGTCCCAGCCCAGCCGCGAGGT...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTCCAGCACCTCGCGGCTaGGCTGGGACTGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFPAPRG*AGTGGR
Trigger: CCTTCCGCCAGTCCCAGCCCAGCCGCGAGGTGCTGG...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCACACCCAACCCTGCCTaGGTCCCTGTGGACGTCGGC +
Preference number: 4 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSTPNPA*VPVDVG
Trigger: GCCGACGTCCACAGGGACCCAGGCAGGGTTGGGTGT...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGGAGTGGCAATGGGGCTaGACAGATGCCCCACCACGA +
Preference number: 4 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPEWQWG*TDAPPR
Trigger: TCGTGGTGGGGCATCTGTCCAGCCCCATTGCCACTC...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GGTTTTTCTCAGTGCCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTGGTGCAGCCGCAGGCTaGTCTCCAGGTAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: GFSQCLATNCVAVPCSDTGAAAG*SPGSPR
Trigger: GCGTGGGCTACCTGGAGATCAGCCTGCGGCTGCACC...AGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCTGCAGCAGAATTGCTTaGACCCAAGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGARICGCSRAGPRRKTLCSRIA*TQEAEV
Trigger: AACCTCCGCCTCTTGGGTTCAAGCAATTCTGCTGCA...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAAAGCCACGTAAGATCTaGCGCATCGCTGGGATTGGG +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGKPRKI*RIAGIG
Trigger: CCCAATCCCAGCGATGCGTCAGATCTTACGTGGCTT...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp ACTCGCTGGGTCCCCCACTACTTTCTAGTCCTGTCTCATCACCCTCTTCCCCACTCCACAAGTCAAGTGTaGACAGTAGCAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: TRWVPHYFLVLSHHPLPHSTSQV*TVAVAT
Trigger: TGTGGCCACTGCTACTGTTCACACTTGACTTGTGGA...GTGGGGAAGAGGGTGATGAGACAGGACTAGAAAGTAGTGGGGGACCCAGCGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGTCCCGTGGGAAGCTaGGGAAGCTGTAGCGTTCGT +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERRPVGS*GSCSVR
Trigger: ACGAACGCTACAGCTTCCGCAGCTTCCCACGGGACG...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAGAACTGCTTCAGGTCTaGGCTGGAAGTGCTCATCCG +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGELLQV*AGSAHP
Trigger: CGGATGAGCACTTCCAGCCCAGACCTGAAGCAGTTC...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGCCACTGCTGTTGCTGTaGCCCAGGCCCAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKPLLLL*PRPKPG
Trigger: TCCAGGCTTGGGCCTGGGCCACAGCAACAGCAGTGG...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAACGGTCTTTGGAGTTTaGCCTACTGGCTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGTVFGV*PTGCHP
Trigger: AGGGTGGCAGCCAGTAGGCCAAACTCCAAAGACCGT...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGATTCAGTAGAAAGGTGTaGGCAGCGGCGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGFSRKV*AAAMAL
Trigger: CAAAGCCATCGCCGCTGCTCACACCTTTCTACTGAA...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTGTAAAGAGAAGGCTCTaGGGTATCAACAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PLGVQILWTWATSAQDRSVKRRL*GINSLG
Trigger: GCCCAGGCTGTTGATACCTCAGAGCCTTCTCTTTAC...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp CTGGGCTGTTGGGAAAAGGACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAACCTGTTTGGATGCCCTaGGTGGCAATGGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LGCWEKDKESVFPERQEEPVWMP*VAMGLD
Trigger: GTCCAGCCCCATTGCCACTCAGGGCATCCAAACAGG...TTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGTCCTTTTCCCAACAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGACGCTCTCGGCCCAGTaGTCGCCGCTGTACTTGTCC +
Preference number: 4 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRTLSAQ*SPLYLS
Trigger: GGACAAGTACAGCGGCGAGCACTGGGCCGAGAGCGT...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTGTTGTATGCCCGCACTaGTCGGATGAACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PLGVQILWTWATSAQDRSVVCPH*SDEQAF
Trigger: GAAAGCCTGTTCATCCGAGCAGTGCGGGCATACAAC...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAGTTCTCACCGTTGTATaGCCGCACTGCTCGGATGAA +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGVLTVV*PHCSDE
Trigger: TTCATCCGAGCAGTGCGGGCATACAACGGTGAGAAC...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAGAGCAGATAGCTGACTaGACAGGGGGCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGEQIAD*TGGCIL
Trigger: AAGAATGCAGCCCCCTGTGCAGTCAGCTATCTGCTC...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCGGTCTGGGCTGGAAGTaGTCATCCGAGAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSGLGWK*SSERPQ
Trigger: TTGGGGCCTCTCGGATGAGCACTTCCAGCCCAGACC...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGGGTCTGGGCTGGAAGTaGTCATCCGAGAGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGGLGWK*SSERPQ
Trigger: TTGGGGCCTCTCGGATGAGCACTTCCAGCCCAGACC...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGCTCACTTTGGGGCAGTaGACATCCTGTTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPLTLGQ*TSCSSA
Trigger: GGCAGAGGAACAGGATGTGCACTGCCCCAAAGTGAG...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACCCTGTCTCGAGCTCTaGTGCAGACCTGACCTGAGA +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERPCLEL*CRPDLR
Trigger: TCTCAGGTCAGGTCTGCAGCAGAGCTCGAGACAGGG...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGCTGGGATTGGGGGCTaGTGTGGACACGGTGCATCC +
Preference number: 4 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRAGIGG*CGHGAS
Trigger: GGATGCACCGTGTCCACAGCAGCCCCCAATCCCAGC...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGTCAGTCACTTTTAAATACATGGGTGTACACAAACCTCCCCTCAGCCCTTCGCCACAACACCCAACCCTaGCTGGGTCCCTGTGGACGT +
Preference number: 4 (lower is better)
Translates to: SQSLLNTWVYTNLPSALRHNTQP*LGPCGR
Trigger: ACGTCCACAGGGACCCAGGCAGGGTTGGGTGTTGTG...GCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACATCAGCTCGTCCCGTaGGAAGCTGCGGAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERHQLVP*EAAEAV
Trigger: TACAGCTTCCGCAGCTTCCCACGGGACGAGCTGATG...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTTGTGAGCAGCGGCGATaGCTTTGGGGAGATTATTTG +
Preference number: 4 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLCEQRR*LWGDYL
Trigger: CAAATAATCTCCCCAAAGCCATCGCCGCTGCTCACA...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGATCTCTTTGGTTGCTGTaGGCTAGCTGGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGSLWLL*ASWSPP
Trigger: TGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGA...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACAGAGACAATCTCAGTaGCCCCTCCAGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERQRQSQ*PLQLHG
Trigger: GCCATGCAGCTGGAGGGGCCACTGAGATTGTCTCTG...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GTTCAAACCCTCCAGTGGTTCCCATCTCACTTAGCAGAAGCCAAGGCCCTCCACGGAGTACAGATTTTGTaGACGTGGGCAACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VQTLQWFPSHLAEAKALHGVQIL*TWATSA
Trigger: GGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCC...GTGGAGGGCCTTGGCTTCTGCTAAGTGAGATGGGAACCACTGGAGGGTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTGAACCCGGCATCCCGTaGGTGAAGGCCATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFEPGIP*VKAISP
Trigger: GGGGGAGATGGCCTTCACCCACGGGATGCCGGGTTC...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GCAAAGCCGGGCTGTCATGGTGTCCTCTTTCAGGGAGATGTCATGGGCACAGGCTCACTGTTTGGGGGATaGCAGATGATCAAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: AKPGCHGVLFQGDVMGTGSLFGG*QMIKSS
Trigger: TGAACTCTTGATCATCTGCCATCCCCCAAACAGTGA...GCCTGTGCCCATGACATCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGGATCAGTCTTGCCCCTaGGGGCAGGCACAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGDQSCP*GQAQEV
Trigger: GACTTCCTGTGCCTGCCCCCAGGGGCAAGACTGATC...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp CTGCTCTTTCCTGACCACGTAGAGCAAGTTCTCACTTaGGGGCAGTGCACATCCTGTTCCTCTGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLFPDHVEQVLT*GQCTSCSSAWN
Trigger: ATTCCAGGCAGAGGAACAGGATGTGCACTGCCCCAAAGTGAGAACTTGCTCTACGTGGTCAGGAAAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp GCCAGAACCTCCCATTCCAACCACAGACAGCCTGCTTaGCACCAAATTCCATACTTACCCAGCCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: ARTSHSNHRQPA*HQIPYLPSPSF
Trigger: GAAGGATGGGCTGGGTAAGTATGGAATTTGGTGCAAAGCAGGCTGTCTGTGGTTGGAATGGGAGGTTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAAAGGCTGGCAGGCCCTaGTTGCAGCGCTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTKAGRP*LQRLRQ
Trigger: CTGCCTCAAGCGCTGCAAGCAGGGCCTGCCAGCCTT...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp CTGGGCTGTTGGGAAAAGGACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAACCAAGAGGCGGAGGTTaGAGTGAGCTGAGAACGTGC +
Preference number: 4 (lower is better)
Translates to: LGCWEKDKESVFPERQEEPRGGG*SELRTC
Trigger: GCACGTTCTCAGCTCACTGCAACCTCCGCCTCTTGG...TTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGTCCTTTTCCCAACAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGAGTGGCCCCTCCAGCTaGATGGCTTTAAATGCCACT +
Preference number: 4 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPSGPSS*MALNAT
Trigger: AGTGGCATTTAAAGCCATGCAGCTGGAGGGGCCACT...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCTGCCTCCTGTTTGGATaGCCTGAGTGGCAATGGGGC +
Preference number: 4 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSCLLFG*PEWQWG
Trigger: GCCCCATTGCCACTCAGGGCATCCAAACAGGAGGCA...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AAATCAATCAAGGCACTCCTCTGTTCAAACCCTCCAGTGGTTCCCATCTCACTTACCCTTCCCAGCGGGTaGCTCCTGTTTGGATGCCCT +
Preference number: 4 (lower is better)
Translates to: KSIKALLCSNPPVVPISLTLPSG*LLFGCP
Trigger: AGGGCATCCAAACAGGAGGCACCCGCTGGGAAGGGT...AAGTGAGATGGGAACCACTGGAGGGTTTGAACAGAGGAGTGCCTTGATTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCAGGAAGTTTCTCTGGTaGAGTAAAGGTTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SGARICGCSRAGPRRKTLRKFLW*SKGWGE
Trigger: CTCACCCCAACCTTTACTCCACCAGAGAAACTTCCT...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGATGCAGGGCACAGAGGTaGAGTGAGTCACAACACCCA +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERCRAQR*SESQHP
Trigger: TGGGTGTTGTGACTCACTCCACCTCTGTGCCCTGCA...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGCACTCAGGGAGGTGTTaGGTTGAGGTCATTGAGTGC +
Preference number: 4 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPHSGRC*VEVIEC
Trigger: GCACTCAATGACCTCAACCCAACACCTCCCTGAGTG...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGAGGTGCAAGGATATGTaGCTGTTCACGAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGRCKDM*LFTSRP
Trigger: GGGCCGGCTCGTGAACAGCCACATATCCTTGCACCT...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp AGTCAGTCACTTTTAAATACATGGGTGTACACAAACCTCCCCTCAGCCCTTCGCCAAAGAGCAGATAGCTaGCTGCACAGGGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SQSLLNTWVYTNLPSALRQRADS*LHRGLH
Trigger: ATGCAGCCCCCTGTGCAGTCAGCTATCTGCTCTTTG...GCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAGACTGCACAGGGGGCTaGATTCTTCAGGTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERDCTGG*ILQVVQ
Trigger: TTGAACGACCTGAAGAATGCAGCCCCCTGTGCAGTC...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGTCAGTCACTTTTAAATACATGGGTGTACACAAACCTCCCCTCAGCCCTTCGCCTGAGAACGTGCCATTaGACTCCAGCCTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SQSLLNTWVYTNLPSALRLRTCH*TPAWAR
Trigger: TCTTGCCCAGGCTGGAGTGCAATGGCACGTTCTCAG...GCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GATGCAAAGTGGGGCAAAAGCCACATTTCTGCACTCTACACTCTCTACTCAACTCCAAGAGGCGGAGGTTaGAGTGAGCTGAGAACGTGC +
Preference number: 4 (lower is better)
Translates to: DAKWGKSHISALYTLYSTPRGGG*SELRTC
Trigger: GCACGTTCTCAGCTCACTGCAACCTCCGCCTCTTGG...AGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCTTTTGCCCCACTTTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGCAGCAACCACAGACAGCCTaGTTTGCACCAAATTCCATA +
Preference number: 4 (lower is better)
Translates to: VPVDVGFHFLTQLGRTLQQPQTA*FAPNSI
Trigger: TATGGAATTTGGTGCAAAGCAGGCTGTCTGTGGTTG...CTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCTCCTTCCCAGGCTATTaGAGGAAAAGTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SGARICGCSRAGPRRKTLSFPGY*RKSLVS
Trigger: GGAAACAAGACTTTTCCTGCAATAGCCTGGGAAGGA...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGACCCAACAGTACCTCTaGAGGGCACAGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGTQQYL*RAQRWS
Trigger: ACTCCACCTCTGTGCCCTGCAGAGGTACTGTTGGGT...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp CCTTCTGAGAGCACCCCCAACAATAAACCAAGTGCATTCAGATCCCTGTCTCGAGTTTGGCCTACTGGCTaGCACCCTAAAGTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: PSESTPNNKPSAFRSLSRVWPTG*HPKVGD
Trigger: ATCTCCCACTTTAGGGTGGCAGCCAGTAGGCCAAAC...TCGAGACAGGGATCTGAATGCACTTGGTTTATTGTTGGGGGTGCTCTCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp CTGGGCTGTTGGGAAAAGGACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAAGACTGCACAGGGGGCTaGATTCTTCAGGTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: LGCWEKDKESVFPERQEEDCTGG*ILQVVH
Trigger: GTGAACGACCTGAAGAATGCAGCCCCCTGTGCAGTC...TTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGTCCTTTTCCCAACAGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449224.1
CDS-3UTR CCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGCTTCAGGTCTGGGCTaGAAGTGCTCATCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRASGLG*KCSSER
Trigger: CCTCTCGGATGAGCACTTCCAGCCCAGACCTGAAGC...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp ATGACTGATAAAGGCTTTCACAGGTTCCTTCTGAGAGCACCCCCAACAATAAACGATTGGGGGCTGCTGTaGACACGGTGCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: MTDKGFHRFLLRAPPTINDWGLL*TRCIHQ
Trigger: CTGGTGGATGCACCGTGTCCACAGCAGCCCCCAATC...GTTTATTGTTGGGGGTGCTCTCAGAAGGAACCTGTGAAAGCCTTTATCAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCTTCTGAGAGCACCCCCAACAATAAACCAAGTGCATTCAGATCCCTGTCTCGAAAAGCCGGGCTGTCATaGTGTCCTCTTTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PSESTPNNKPSAFRSLSRKAGLS*CPLSGR
Trigger: TCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTT...TCGAGACAGGGATCTGAATGCACTTGGTTTATTGTTGGGGGTGCTCTCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp CTCCTGAAAGCACACATTTCCTTCCTAAGGCAGCCCTaGTGGTCAGTGCTCGCAGTGGCTCTCTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LLKAHISFLRQP*WSVLAVALFLN
Trigger: ATTCAGAAAGAGAGCCACTGCGAGCACTGACCACAAGGGCTGCCTTAGGAAGGAAATGTGTGCTTTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp AGTCAGTCACTTTTAAATACATGGGTGTACACAAACCTCCCCTCAGCCCTTCGCTTCAGTAGAAAGGTGTaGGCAGCGGCGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQSLLNTWVYTNLPSALRFSRKV*AAAMAL
Trigger: CAAAGCCATCGCCGCTGCTCACACCTTTCTACTGAA...GCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGCCCGCACTGCTCGGATaGACAGGCTTTCATATGACT +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGPALLG*TGFHMT
Trigger: AGTCATATGAAAGCCTGTTCATCCGAGCAGTGCGGG...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGTGCAGCAGAATTGCTTaGACCCAAGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGCSRIA*TQEAEV
Trigger: AACCTCCGCCTCTTGGGTTCAAGCAATTCTGCTGCA...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp CTGGGCTGTTGGGAAAAGGACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAAAAGGACACTGCAGCCTaGGGCTATAAGGGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LGCWEKDKESVFPERQEEKDTAA*GYKGSS
Trigger: TGAACTCCCCTTATAGCCTCAGGCTGCAGTGTCCTT...TTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGTCCTTTTCCCAACAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCTAATAAGAACTCCTaGAAGCACACATTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLPNKNS*KHTFPS
Trigger: GGAAGGAAATGTGTGCTTTCAGGAGTTCTTATTAGG...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GCAAAGCCGGGCTGTCATGGTGTCCTCTTTCAGGGAGATGTCATGGGCACAGGCAATTTTCAACAAGAGTaGGCTTGTACATACCACACT +
Preference number: 4 (lower is better)
Translates to: AKPGCHGVLFQGDVMGTGNFQQE*ACTYHT
Trigger: AGTGTGGTATGTACAAGCTCACTCTTGTTGAAAATT...GCCTGTGCCCATGACATCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGGTTGTATGCCCGCACTaGTCGGATGAACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGVVCPH*SDEQAF
Trigger: GAAAGCCTGTTCATCCGAGCAGTGCGGGCATACAAC...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTGGAACCCTCGCAGGCTaGGAGACACTCGTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFGTLAG*ETLVKG
Trigger: GCCTTTTACGAGTGTCTCGCAGCCTGCGAGGGTTCC...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCGAGCAGATAGCTGACTaGACAGGGGGCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSEQIAD*TGGCIL
Trigger: AAGAATGCAGCCCCCTGTGCAGTCAGCTATCTGCTC...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGGGAAGTCTCTTTGGTTaGTGTGGGCTAGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGGSLFG*CGLAGL
Trigger: GAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCC...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGCTTCCATTCTACCCCTaGCCACGACTCTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRLPFYP*PRLCLV
Trigger: GACCAAGCAGAGTCGTGGGCAGGGGTAGAATGGAAG...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGAGCCCTTGTGGTCAGTaGTCGCAGTGGCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRSPCGQ*SQWLSF
Trigger: GAAAGAGAGCCACTGCGAGCACTGACCACAAGGGCT...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTATAGCCTCCTATAACTaGGGTGAGGTTCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: PLGVQILWTWATSAQDRSIASYN*GEVLFT
Trigger: TGTGAAGAGAACCTCACCCCAGTTATAGGAGGCTAT...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp ATGACTGATAAAGGCTTTCACAGGTTCCTTCTGAGAGCACCCCCAACAATAAACGCTTCAGGTCTGGGCTaGAAGTGCTCATCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: MTDKGFHRFLLRAPPTINASGLG*KCSSER
Trigger: CCTCTCGGATGAGCACTTCCAGCCCAGACCTGAAGC...GTTTATTGTTGGGGGTGCTCTCAGAAGGAACCTGTGAAAGCCTTTATCAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCTCTCTTTGGTTGCTGTaGGCTAGCTGGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSSLWLL*ASWSPP
Trigger: TGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGA...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAAAGAGGAAGTCTCTTTaGTTGCTGTGGGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERKRKSL*LLWASW
Trigger: CCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTT...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAGAGGTATCAACAGCCTaGGCTGTTGGGAAAAGGACA +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLEREVSTA*AVGKRT
Trigger: TGTCCTTTTCCCAACAGCCCAGGCTGTTGATACCTC...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGTCTTGCCTTCAACCCTaGAGGGGCCCAACTACACAA +
Preference number: 4 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKSCLQP*RGPTTQ
Trigger: TTGTGTAGTTGGGCCCCTCCAGGGTTGAAGGCAAGA...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACAGATTTTGTGGACGTaGGCAACTTCAGCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERQILWT*ATSAQD
Trigger: GTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTG...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCAAAGAAGTCACTGTTTaGGGGATGGCAGATGATCAA +
Preference number: 4 (lower is better)
Translates to: SGARICGCSRAGPRRKTLKEVTV*GMADDQ
Trigger: TTGATCATCTGCCATCCCCCAAACAGTGACTTCTTT...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGACTTGATTCTTATTTCTaGGGTAGCAGTGGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGLDSYF*GSSGSV
Trigger: GACTGACCCACTGCTACCCCAGAAATAAGAATCAAG...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GGTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACCCCGCACTGCTCGGATaGACAGGCTTTCATATGACT +
Preference number: 4 (lower is better)
Translates to: GKKGSYEHGEDKCEHEEDPALLG*TGFHMT
Trigger: AGTCATATGAAAGCCTGTTCATCCGAGCAGTGCGGG...GTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTTTCCCTGTTATTCTGTaGAGTATCTCTAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PLGVQILWTWATSAQDRSFPVIL*SISSSQ
Trigger: CTGGGAACTAGAGATACTTCACAGAATAACAGGGAA...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGCAGATAAATCTAGATATTTaGCCACTGCTGTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VPVDVGFHFLTQLGRTLQINLDI*PLLLLW
Trigger: CCACAGCAACAGCAGTGGTCAAATATCTAGATTTAT...CTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGGAGAACTCTCCACTTTaGTTTGCAGCCAGAACCTCC +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGENSPL*FAARTS
Trigger: GGAGGTTCTGGCTGCAAATCAAAGTGGAGAGTTCTC...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GTTCAAACCCTCCAGTGGTTCCCATCTCACTTAGCAGAAGCCAAGGCCCTCCACTTTGGGGAGATTATTTaGCTTGAAGTAAGCGAACTG +
Preference number: 4 (lower is better)
Translates to: VQTLQWFPSHLAEAKALHFGEII*LEVSEL
Trigger: CAGTTCGCTTACTTCAAGGCAAATAATCTCCCCAAA...GTGGAGGGCCTTGGCTTCTGCTAAGTGAGATGGGAACCACTGGAGGGTTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGCCAAGCCTGGAACCTTaGAGTAGCTTCCTAACAGGT +
Preference number: 4 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKPSLEP*SSFLTG
Trigger: ACCTGTTAGGAAGCTACTGCAAGGTTCCAGGCTTGG...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGGTAGCTGCCAGATaGCTACAGCCTCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGMVAAR*LQPLFQ
Trigger: CTGGAAAAGAGGCTGTAGGCATCTGGCAGCTACCAT...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGTCATTGAGTGCAGCCTaGACACCAGGGTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGSLSAA*TPGFHG
Trigger: ACCATGAAACCCTGGTGTGCAGGCTGCACTCAATGA...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAAAGAGTTCAGACAGCTaGGATGAAGGATTAGTTGTG +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGKSSDS*DEGLVV
Trigger: CACAACTAATCCTTCATCGCAGCTGTCTGAACTCTT...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTGAACTGCTTCAGGTCTaGGCTGGAAGTGCTCATCCG +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFELLQV*AGSAHP
Trigger: CGGATGAGCACTTCCAGCCCAGACCTGAAGCAGTTC...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GGTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACTTGCTGTGGGCTAGCTaGTCTCCTCCAGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GKKGSYEHGEDKCEHEEDLLWAS*SPPVPR
Trigger: TCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAA...GTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp CTGGGCTGTTGGGAAAAGGACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAAGAGGTATCAACAGCCTaGGCTGTTGGGAAAAGGACA +
Preference number: 4 (lower is better)
Translates to: LGCWEKDKESVFPERQEEEVSTA*AVGKRT
Trigger: TGTCCTTTTCCCAACAGCCCAGGCTGTTGATACCTC...TTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGTCCTTTTCCCAACAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACAAGGGCTCCATCCATaGCTCTTTTCTGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERQGLHP*LFSVAS
Trigger: AGAAGCAACAGAAAAGAGCCATGGATGGAGCCCTTG...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGTTTGGATGCCCTGAGTaGCAATGGGGCTGGACAGAT +
Preference number: 4 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRFGCPE*QWGWTD
Trigger: ATCTGTCCAGCCCCATTGCCACTCAGGGCATCCAAA...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTTCACTTTTAAATACATaGGTGTACACAAACCTCCCC +
Preference number: 4 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLSLLNT*VYTNLP
Trigger: GGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGA...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGGCTGCCACCCTAAAGTaGGAGATAAAACTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPAATLK*EIKLWN
Trigger: ATTCCAGAGTTTTATCTCCCACTTTAGGGTGGCAGC...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp AGAGAGCCCAAGGGCTCCATCCATGGCTCTTTTCTGTaGCTTCTCAGTAATACTCAGAGACAATCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: REPKGSIHGSFL*LLSNTQRQSQW
Trigger: CCACTGAGATTGTCTCTGAGTATTACTGAGAAGCAACAGAAAAGAGCCATGGATGGAGCCCTTGGGCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp AGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGGTCACATTAAAGAACTaGACTGCTTCAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RKAAMNMGKTSVNMRKTGVTLKN*TASGLG
Trigger: GCCCAGACCTGAAGCAGTTCAGTTCTTTAATGTGAC...CCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGAGAATCTGTGTTTCCTaGACGCCAAGAGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKRICVS*TPRGSL
Trigger: GAGACTTCCTCTTGGCGTTCAGGAAACACAGATTCT...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGTAAAGAGAAGGCTCTaGGGTATCAACAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTVKRRL*GINSLG
Trigger: GCCCAGGCTGTTGATACCTCAGAGCCTTCTCTTTAC...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp GATGCAAAGTGGGGCAAAAGCCACATTTCTGCACTCTACACTCTCTACTCAACTGGCAGATGGATCATCTaGAGTCAAGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: DAKWGKSHISALYTLYSTGRWII*SQEFET
Trigger: GGTCTCGAACTCTTGACTTCAGATGATCCATCTGCC...AGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCTTTTGCCCCACTTTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCTCTCAGTCCTTTGGCTaGTTTCCCATTTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSSQSFG*FPISQR
Trigger: TCTCTGGGAAATGGGAAATCAGCCAAAGGACTGAGA...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGCTTTTCAATCCCCAGTaGAAGGAGGCCAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKLFNPQ*KEANFR
Trigger: TCTGAAGTTGGCCTCCTTTCACTGGGGATTGAAAAG...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGATTTGGGGAGATTATTTaGCTTGAAGTAAGCGAACTG +
Preference number: 4 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGFGEII*LEVSEL
Trigger: CAGTTCGCTTACTTCAAGGCAAATAATCTCCCCAAA...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR GCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTGGAAGTCTCTTTGGTTaGTGTGGGCTAGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFGSLFG*CGLAGL
Trigger: GAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCC...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACACACATCCTGTTCCTCTaGCTGGAATGCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTHILFL*LECLVQ
Trigger: CTGGACAAGGCATTCCAGGCAGAGGAACAGGATGTG...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGTCAGTCACTTTTAAATACATGGGTGTACACAAACCTCCCCTCAGCCCTTCGCCTCTCCACTTTGATTTaGAGCCAGAACCTCCCATTC +
Preference number: 4 (lower is better)
Translates to: SQSLLNTWVYTNLPSALRLSTLI*SQNLPF
Trigger: GAATGGGAGGTTCTGGCTGCAAATCAAAGTGGAGAG...GCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGTCAACTGAAGTCACTTaGCTTCAAATGTACCCACAC +
Preference number: 4 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPSTEVT*LQMYPH
Trigger: GTGTGGGTACATTTGAAGGCAAGTGACTTCAGTTGA...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AAATCAATCAAGGCACTCCTCTGTTCAAACCCTCCAGTGGTTCCCATCTCACTTAGGGGAGTTCACAGCTaGTGGGCACACTATTTACAG +
Preference number: 4 (lower is better)
Translates to: KSIKALLCSNPPVVPISLRGVHS*WAHYLQ
Trigger: CTGTAAATAGTGTGCCCAGCAGCTGTGAACTCCCCT...AAGTGAGATGGGAACCACTGGAGGGTTTGAACAGAGGAGTGCCTTGATTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGCCACATTTCTGCACTCTACACTCTCTACTCAACTTGTTTTTCAGTGGGTGCTGGGGACAGTGTCAGGTaGAAGGATATGTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SHISALYTLYSTCFSVGAGDSVR*KDMWLF
Trigger: GAACAGCCACATATCCTTGCACCTGACACTGTCCCC...AGCACCCACTGAAAAACAAGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGTCATACAGCTCCTTCTaGAGTGTGGTCACATTAAAG +
Preference number: 4 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPSYSSF*SVVTLK
Trigger: CTTTAATGTGACCACACTCCAGAAGGAGCTGTATGA...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGAAGAGGAAGTCTCTTTaGTTGCTGTGGGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRKRKSL*LLWASW
Trigger: CCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTT...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGTTTGGAGATGCAAAGTaGGGCAAAAGCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPFGDAK*GKSHIS
Trigger: AGAAATGTGGCTTTTGCCCCACTTTGCATCTCCAAA...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTGCCAAACACCCCCGCTaGGAGTACAGATTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFAKHPR*EYRFCG
Trigger: TCCACAAAATCTGTACTCCCAGCGGGGGTGTTTGGC...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GGTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACTTGAGGCTGAACCAATaGGGTCTCCATCCAGGAATC +
Preference number: 4 (lower is better)
Translates to: GKKGSYEHGEDKCEHEEDLRLNQ*GLHPGI
Trigger: GATTCCTGGATGGAGACCCCATTGGTTCAGCCTCAA...GTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGATCAGCAACGGTCTTTaGAGTTTGGCCTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRISNGL*SLAYWL
Trigger: CAGCCAGTAGGCCAAACTCCAAAGACCGTTGCTGAT...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp AAATCAATCAAGGCACTCCTCTGTTCAAACCCTCCAGTGGTTCCCATCTCACTTGTCACATTAAAGAACTaGACTGCTTCAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KSIKALLCSNPPVVPISLVTLKN*TASGLG
Trigger: GCCCAGACCTGAAGCAGTTCAGTTCTTTAATGTGAC...AAGTGAGATGGGAACCACTGGAGGGTTTGAACAGAGGAGTGCCTTGATTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGCAGATGGATCATCTaGAGTCAAGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTGRWII*SQEFET
Trigger: GGTCTCGAACTCTTGACTTCAGATGATCCATCTGCC...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR TCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACATAAAACCTTTGGCTaGGGCTTACTTAAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERHKTFG*GLLKVP
Trigger: AGGAACCTTAAGTAAGCCTCAGCCAAAGGTTTTATG...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGTCTTACTCCCTCCCCTaGTTTATTTTTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKSYSLP*FIFLHS
Trigger: GCTGTGGAGAAAAATAAAGCAGGGGAGGGAGTAAGA...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTATCTGTTGGCCAAATTaGTTAATTCCTTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLICWPN*LIPSYS
Trigger: AGAATAGGAAGGAATTAAGCAATTTGGCCAACAGAT...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGTCCTTCTCAGTCCTTTaGCTGATTTCCCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKSFSVL*LISHFP
Trigger: TGGGAAATGGGAAATCAGCCAAAGGACTGAGAAGGA...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAAACACCACACTCTCTTaGTTTTCTCTGACCTTAAGG +
Preference number: 4 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERNTTLS*FSLTLR
Trigger: CCTTAAGGTCAGAGAAAACCAAGAGAGTGTGGTGTT...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GGTTTTTCTCAGTGCCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTATTTTCTCACACAGCTaGGAAGGACACTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GFSQCLATNCVAVPCSDTIFSHS*EGHCSL
Trigger: CAGGCTGCAGTGTCCTTCCCAGCTGTGTGAGAAAAT...AGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTAGCCAGCTATTTGTGTaGGGACAGTGTCAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFSQLFV*GQCQVQ
Trigger: TTGCACCTGACACTGTCCCCACACAAATAGCTGGCT...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGCAGCTATCTTGTATCTGTTaGCCAAATTGCTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: VPVDVGFHFLTQLGRTLQLSCIC*PNCLIP
Trigger: AGGAATTAAGCAATTTGGCCAACAGATACAAGATAG...CTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACACACCCTCTTCCCCACTaGGTTCAAAAGGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTHPLPH*VQKEVS
Trigger: AGAAACTTCCTTTTGAACTCAGTGGGGAAGAGGGTG...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGAAGGTATTAGTATGTTaGATATGTCGGTATGTGCTC +
Preference number: 4 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPKVLVC*ICRYVL
Trigger: GAGCACATACCGACATATGCAACATACTAATACCTT...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGTCATACAGCTCCTTCTaGAGTGTGGTCACATTAAAG +
Preference number: 4 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKSYSSF*SVVTLK
Trigger: CTTTAATGTGACCACACTCCAGAAGGAGCTGTATGA...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CCA 90 bp ATGACTGATAAAGGCTTTCACAGGTTCCTTCTGAGAGCACCCCCAACAATAAACAGCATTGTCCTCAAATaGGATCGGCCAACCGTTGTA +
Preference number: 4 (lower is better)
Translates to: MTDKGFHRFLLRAPPTINSIVLK*DRPTVV
Trigger: TACAACGGTTGGCCGATCCCATTTGAGGACAATGCT...GTTTATTGTTGGGGGTGCTCTCAGAAGGAACCTGTGAAAGCCTTTATCAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCTTCTGAGAGCACCCCCAACAATAAACCAAGTGCATTCAGATCCCTGTCTCGAAAGTCAACCCATACGTaGAACAACAACATGTACAGA +
Preference number: 4 (lower is better)
Translates to: PSESTPNNKPSAFRSLSRKSTHT*NNNMYR
Trigger: TCTGTACATGTTGTTGTTCCACGTATGGGTTGACTT...TCGAGACAGGGATCTGAATGCACTTGGTTTATTGTTGGGGGTGCTCTCAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAATCTTAGAGCAGGCCTaGAAGCTCCCACAAAGCTTA +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTILEQA*KLPQSL
Trigger: TAAGCTTTGTGGGAGCTTCCAGGCCTGCTCTAAGAT...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp ATTGTCCTCAAATGGGATCGGCCAACCGTTGTAATTTaGGAGATGCAAAGTGGGGCAAAAGCCACATTTCTG +
Preference number: 4 (lower is better)
Translates to: IVLKWDRPTVVI*EMQSGAKATFL
Trigger: CAGAAATGTGGCTTTTGCCCCACTTTGCATCTCCAAAATTACAACGGTTGGCCGATCCCATTTGAGGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp TCTACAGCCTTCAATCAAAGCAAAGTACTGACAATATaGACTGTACTATCACCCGGGTCCTCAGGGGACATC +
Preference number: 4 (lower is better)
Translates to: STAFNQSKVLTI*TVLSPGSSGDI
Trigger: GATGTCCCCTGAGGACCCGGGTGATAGTACAGTCAATATTGTCAGTACTTTGCTTTGATTGAAGGCTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTGGAGATTATTTGCCTTaGAGTAAGCGAACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFGDYLP*SKRTAG
Trigger: TCCTGCAGTTCGCTTACTTCAAGGCAAATAATCTCC...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp AGTGTTCCACCCCAATTAACCACCATTACACAAAAACCCAAACACTCTATCCTTTGGTGTCAGAAGGGATaGGGAAAGCAGGATAGAGCT +
Preference number: 4 (lower is better)
Translates to: SVPPQLTTITQKPKHSILWCQKG*GKQDRA
Trigger: AGCTCTATCCTGCTTTCCTCATCCCTTCTGACACCA...AAGGATAGAGTGTTTGGGTTTTTGTGTAATGGTGGTTAATTGGGGTGGAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACATTCAGACAGCTGCGATaGAGGATTAGTTGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTFRQLR*RISCGF
Trigger: AAACCCACAACTAATCCTTCATCGCAGCTGTCTGAA...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GGTTTTTCTCAGTGCCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTCTTCCCTCTTCCTTCTaGCCTTGTCCACTAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GFSQCLATNCVAVPCSDTLPSSF*PCPLKF
Trigger: AAACTTTAGTGGACAAGGGCAGAAGGAAGAGGGAAG...AGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AAATCAATCAAGGCACTCCTCTGTTCAAACCCTCCAGTGGTTCCCATCTCACTTGCATATGTCGGTATGTaGTCATTTCAGTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: KSIKALLCSNPPVVPISLAYVGM*SFQSVS
Trigger: ACTGACTGACTGAAATGAGCACATACCGACATATGC...AAGTGAGATGGGAACCACTGGAGGGTTTGAACAGAGGAGTGCCTTGATTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGTGTTCCACCCCAATTAACCACCATTACACAAAAACCCAAACACTCTATCCTTTGTGAGCAGCGGCGATaGCTTTGGGGAGATTATTTG +
Preference number: 4 (lower is better)
Translates to: SVPPQLTTITQKPKHSILCEQRR*LWGDYL
Trigger: CAAATAATCTCCCCAAAGCCATCGCCGCTGCTCACA...AAGGATAGAGTGTTTGGGTTTTTGTGTAATGGTGGTTAATTGGGGTGGAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp CCATACTTACCCAGCCCATCCTTCCCTATTTCAGTAACTGGTAACTCCATCTTTGCCCAACTACACAAGTaGCTTATTTGGAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PYLPSPSFPISVTGNSIFAQLHK*LIWRRE
Trigger: TTCCCTTCTCCAAATAAGCCACTTGTGTAGTTGGGC...AAAGATGGAGTTACCAGTTACTGAAATAGGGAAGGATGGGCTGGGTAAGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGAAAAGGAAGTTTCTCTaGTGGAGTAAAGGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRKRKFL*WSKGWG
Trigger: ACCCCAACCTTTACTCCACCAGAGAAACTTCCTTTT...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp AGTCAGTCACTTTTAAATACATGGGTGTACACAAACCTCCCCTCAGCCCTTCGCTCTCTTCTTGTAAAATaGGGCACTAATATCTTACCG +
Preference number: 4 (lower is better)
Translates to: SQSLLNTWVYTNLPSALRSLLVK*GTNILP
Trigger: CGGTAAGATATTAGTGCCTCATTTTACAAGAAGAGA...GCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp CCTTCTGAGAGCACCCCCAACAATAAACCAAGTGCATTCAGATCCCTGTCTCGACTTCACACTGTATTTTaGATTCCAGAACTTCTACAT +
Preference number: 4 (lower is better)
Translates to: PSESTPNNKPSAFRSLSRLHTVF*IPELLH
Trigger: ATGTAGAAGTTCTGGAATGCAAAATACAGTGTGAAG...TCGAGACAGGGATCTGAATGCACTTGGTTTATTGTTGGGGGTGCTCTCAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp AGCCACATTTCTGCACTCTACACTCTCTACTCAACTTGTTTTTCAGTGGGTGCTCAAAAGCCACATTTCTaGACTCTACACTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: SHISALYTLYSTCFSVGAQKPHF*TLHSLL
Trigger: GAGTAGAGAGTGTAGAGTGCAGAAATGTGGCTTTTG...AGCACCCACTGAAAAACAAGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR GCA 90 bp GGTTTTTCTCAGTGCCTTGCTACAAACTGTGTTGCAGTTCCATGTTCTGACACTGTGGGTTTTTCTCAGTaGCTTGCTACAAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: GFSQCLATNCVAVPCSDTVGFSQ*LATNCV
Trigger: AACACAGTTTGTAGCAAGGCACTGAGAAAAACCCAC...AGTGTCAGAACATGGAACTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR TCA 90 bp AGCCACATTTCTGCACTCTACACTCTCTACTCAACTTGTTTTTCAGTGGGTGCTCTCACAGCCAATAAATaGCTGATAAAGGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: SHISALYTLYSTCFSVGALTANK*LIKAFT
Trigger: TGTGAAAGCCTTTATCAGTCATTTATTGGCTGTGAG...AGCACCCACTGAAAAACAAGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp CACCCTAAAGTGGGAGATAAAACTCTGGAATCTATCTaGTATCTGTTGGCCAAATTGCTTAATTCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: HPKVGDKTLESI*YLLAKLLNSFL
Trigger: TAGGAAGGAATTAAGCAATTTGGCCAACAGATACAAGATAGATTCCAGAGTTTTATCTCCCACTTTAGGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CCA 90 bp AGTGTTCCACCCCAATTAACCACCATTACACAAAAACCCAAACACTCTATCCTTTTTATTCCTATGTATTaGCTATCTCTTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SVPPQLTTITQKPKHSILFIPMY*LSLSPC
Trigger: ACAGGGAGAAAGAGATAGCCAATACATAGGAATAAA...AAGGATAGAGTGTTTGGGTTTTTGTGTAATGGTGGTTAATTGGGGTGGAACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp TTAGAAAGTCTCGAAAATCAGGAAGGTATTAGTATGTaGCATATGTCGGTATGTGCTCATTTCAGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: LESLENQEGISM*HMSVCAHFSQS
Trigger: TGACTGACTGAAATGAGCACATACCGACATATGCAACATACTAATACCTTCCTGATTTTCGAGACTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
3UTR CAA 72 bp GTGGGAGATAAAACTCTGGAATCTATCTTGTATCTGTaGGCCAAATTGCTTAATTCCTTCCTATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VGDKTLESILYL*AKLLNSFLFSS
Trigger: AGAAGAGAATAGGAAGGAATTAAGCAATTTGGCCAACAGATACAAGATAGATTCCAGAGTTTTATCTCCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS GCA 90 bp AGCACCTCGCGGCTGGGCTGGGACTGGCGGAAGGCTGGCAGGCCCTaGTTGCAGCGCTTGAGGCAGTGCGCGCGGCGCAGCAGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: STSRLGWDWRKAGRP*LQRLRQCARRSRPP
Trigger: CGGGGGCCTGCTGCGCCGCGCGCACTGCCTCAAGCGCTGCAAGCAGGGCCTGCCAGCCTTCCGCCAGTCCCAGCCCAGCCGCGAGGTGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCCCCTGCTTGCAGCGCTaGAGGCAGTGCGCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: SGARICGCSRAGPRRKTLPCLQR*RQCARR
Trigger: GCGCCGCGCGCACTGCCTCAAGCGCTGCAAGCAGGG...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGAGCTGTAGCGTTCGTATaGGGCGCGCCCGGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGAVAFV*GAPGAQ
Trigger: CTGCGCGCCGGGCGCGCCCAATACGAACGCTACAGC...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp GTCCCTGTGGACGTCGGCTTTCATTTTCTCACACAGCTGGGAAGGACACTGCAGGCTGGCAGGCCCTGCTaGCAGCGCTTGAGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: VPVDVGFHFLTQLGRTLQAGRPC*QRLRQC
Trigger: GCACTGCCTCAAGCGCTGCAAGCAGGGCCTGCCAGC...CTGCAGTGTCCTTCCCAGCTGTGTGAGAAAATGAAAGCCGACGTCCACAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GCAAAGCCGGGCTGTCATGGTGTCCTCTTTCAGGGAGATGTCATGGGCACAGGCCTCCAGTTCTCACCGTaGTATGCCCGCACTGCTCGG +
Preference number: 5 (lower is better)
Translates to: AKPGCHGVLFQGDVMGTGLQFSP*YARTAR
Trigger: CCGAGCAGTGCGGGCATACAACGGTGAGAACTGGAG...GCCTGTGCCCATGACATCTCCCTGAAAGAGGACACCATGACAGCCCGGCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp ACTCGCTGGGTCCCCCACTACTTTCTAGTCCTGTCTCATCACCCTCTTCCCCACCCGAGTTCCCCGAGGTaGGTAGAGTGTTCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: TRWVPHYFLVLSHHPLPHPSSPR*VECSGG
Trigger: TCCCCCAGAACACTCTACCAACCTCGGGGAACTCGG...GTGGGGAAGAGGGTGATGAGACAGGACTAGAAAGTAGTGGGGGACCCAGCGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AGCCACGTAAGATCTGACGCATCGCTGGGATTGGGGGCTGCTGTGGACACGGTGGTTGGGTTGAGGTCATaGAGTGCAGCCTGCACACCA +
Preference number: 5 (lower is better)
Translates to: SHVRSDASLGLGAAVDTVVGLRS*SAACTP
Trigger: TGGTGTGCAGGCTGCACTCAATGACCTCAACCCAAC...CACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTCAGATCTTACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCGCGGGTGCCTCCTGTTaGGATGCCCTGAGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: SGARICGCSRAGPRRKTLAGASC*DALSGN
Trigger: ATTGCCACTCAGGGCATCCAAACAGGAGGCACCCGC...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGCTGTAGCGTTCGTATaGGGCGCGCCCGGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRAVAFV*GAPGAQ
Trigger: CTGCGCGCCGGGCGCGCCCAATACGAACGCTACAGC...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACACCCTGCTTGCAGCGCTaGAGGCAGTGCGCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTPCLQR*RQCARR
Trigger: GCGCCGCGCGCACTGCCTCAAGCGCTGCAAGCAGGG...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTGCTGAGAACGTGCCATaGCACTCCAGCCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: PLGVQILWTWATSAQDRSAENVP*HSSLGK
Trigger: CTTGCCCAGGCTGGAGTGCAATGGCACGTTCTCAGC...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTTGTGCCTTTCTCCTCTaGCCTTCAACCCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLCAFLL*PSTLEG
Trigger: CCCCTCCAGGGTTGAAGGCAAGAGGAGAAAGGCACA...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTGCAGCGGCGATGGCTTaGGGGAGATTATTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLAAAMA*GRLFAL
Trigger: CAAGGCAAATAATCTCCCCAAAGCCATCGCCGCTGC...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTGAAGACGGGCCAGACTaGAGGCTGAACCAATGGGGT +
Preference number: 5 (lower is better)
Translates to: PLGVQILWTWATSAQDRSEDGPD*RLNQWG
Trigger: ACCCCATTGGTTCAGCCTCAAGTCTGGCCCGTCTTC...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTAGGAAGTCTCTTTGGTaGCTGTGGGCTAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLRKSLW*LWASWS
Trigger: AGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCT...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAGCTGAGAACGTGCCATaGCACTCCAGCCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERAENVP*HSSLGK
Trigger: CTTGCCCAGGCTGGAGTGCAATGGCACGTTCTCAGC...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp CCGCTGGGAGTACAGATTTTGTGGACGTGGGCAACTTCAGCCCAAGACAGAAGTTCTGCCTGGAATGCCTaGTCCAGGATCCACTTCCCT +
Preference number: 5 (lower is better)
Translates to: PLGVQILWTWATSAQDRSSAWNA*SRIHFP
Trigger: AGGGAAGTGGATCCTGGACAAGGCATTCCAGGCAGA...ACTTCTGTCTTGGGCTGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AGCCACGTAAGATCTGACGCATCGCTGGGATTGGGGGCTGCTGTGGACACGGTGCACAGACAGCCTGCTTaGCACCAAATTCCATACTTA +
Preference number: 5 (lower is better)
Translates to: SHVRSDASLGLGAAVDTVHRQPA*HQIPYL
Trigger: TAAGTATGGAATTTGGTGCAAAGCAGGCTGTCTGTG...CACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTCAGATCTTACGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS GCA 90 bp GTAGAAATCCTTGAAGTCCTTGATCTCCCTGGAACCCTCGCAGGCTaGGAGACACTCGTAAAAGGCTTTGAAGAAGTCGGGAAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: VEILEVLDLPGTLAG*ETLVKGFEEVGKGQ
Trigger: CTGGCCCTTCCCGACTTCTTCAAAGCCTTTTACGAGTGTCTCGCAGCCTGCGAGGGTTCCAGGGAGATCAAGGACTTCAAGGATTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320954.11
ENST00000449224.1
ENST00000485310.1
CDS-3UTR CAA 90 bp TCAGGTGCAAGGATATGTGGCTGTTCACGAGCCGGCCCTAGACGGAAAACACTCAAATCCTTGAAGTCCTaGATCTCCCTGGAACCCTCG +
Preference number: 5 (lower is better)
Translates to: SGARICGCSRAGPRRKTLKSLKS*ISLEPS
Trigger: CGAGGGTTCCAGGGAGATCAAGGACTTCAAGGATTT...GAGTGTTTTCCGTCTAGGGCCGGCTCGTGAACAGCCACATATCCTTGCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp ATGACTGATAAAGGCTTTCACAGGTTCCTTCTGAGAGCACCCCCAACAATAAACGACGCATCGCTGGGATaGGGGGCTGCTGTGGACACG +
Preference number: 5 (lower is better)
Translates to: MTDKGFHRFLLRAPPTINDASLG*GAAVDT
Trigger: CGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTC...GTTTATTGTTGGGGGTGCTCTCAGAAGGAACCTGTGAAAGCCTTTATCAGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AGCCACGTAAGATCTGACGCATCGCTGGGATTGGGGGCTGCTGTGGACACGGTGAAAGTACTGACAATATaGACTGTACTATCACCCGGG +
Preference number: 5 (lower is better)
Translates to: SHVRSDASLGLGAAVDTVKVLTI*TVLSPG
Trigger: CCCGGGTGATAGTACAGTCAATATTGTCAGTACTTT...CACCGTGTCCACAGCAGCCCCCAATCCCAGCGATGCGTCAGATCTTACGTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp CCTTCTGAGAGCACCCCCAACAATAAACCAAGTGCATTCAGATCCCTGTCTCGATTCCTAAGGCAGCCCTaGTGGTCAGTGCTCGCAGTG +
Preference number: 5 (lower is better)
Translates to: PSESTPNNKPSAFRSLSRFLRQP*WSVLAV
Trigger: CACTGCGAGCACTGACCACAAGGGCTGCCTTAGGAA...TCGAGACAGGGATCTGAATGCACTTGGTTTATTGTTGGGGGTGCTCTCAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAGCAGCGGCGATGGCTTaGGGGAGATTATTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERAAAMA*GRLFAL
Trigger: CAAGGCAAATAATCTCCCCAAAGCCATCGCCGCTGC...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGCTCCAGTTCTCACCGTaGTATGCCCGCACTGCTCGG +
Preference number: 5 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRLQFSP*YARTAR
Trigger: CCGAGCAGTGCGGGCATACAACGGTGAGAACTGGAG...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCAGTGGGTGCTAGAATaGGTACAAGTCAGACCAAGT +
Preference number: 5 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLQWVLE*VQVRPS
Trigger: ACTTGGTCTGACTTGTACCAATTCTAGCACCCACTG...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS CCA 90 bp TTTCGTCATCAGGATGCTTCAGTAGAAAGGTGTGAGCAGCGGCGATaGCTTTGGGGAGATTATTTGCGGTGCACGAGTTCCCCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: FRHQDASVERCEQRR*LWGDYLRCTSSPLS
Trigger: GCTTAAAGGGGAACTCGTGCACCGCAAATAATCTCCCCAAAGCCATCGCCGCTGCTCACACCTTTCTACTGAAGCATCCTGATGACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485310.1
CDS-3UTR CAA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAAGGAAGTCTCTTTGGTaGCTGTGGGCTAGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERRKSLW*LWASWS
Trigger: AGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCT...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp CTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTCCCTTTCACTTTGGACCAACCGTTGTAATTTaGGAGATGCAAAGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LTPDDMQLERRGLPFHFGPTVVI*EMQSGA
Trigger: TGCCCCACTTTGCATCTCCAAAATTACAACGGTTGG...TCCAAAGTGAAAGGGAAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACGGGGGCTTTTCCTTCCCAGGCTATaGCAGGAAAAGTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: DRKGRLTPDDMQLERRGLFLPRL*QEKSCF
Trigger: GAAACAAGACTTTTCCTGCAATAGCCTGGGAAGGAA...AAGCCCCCGTCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GTTCAAACCCTCCAGTGGTTCCCATCTCACTTAGCAGAAGCCAAGGCCCTCCACGTTTTTCTCAGTGCCTaGCTACAAACTGTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: VQTLQWFPSHLAEAKALHVFLSA*LQTVLQ
Trigger: CTGCAACACAGTTTGTAGCAAGGCACTGAGAAAAAC...GTGGAGGGCCTTGGCTTCTGCTAAGTGAGATGGGAACCACTGGAGGGTTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS TCA 90 bp TTCCTCTTCATCATTTCGTCATCAGGATGCTTCAGTAGAAAGGTGTaGGCAGCGGCGATGGCTTTGGGGAGATTATTTGCGGTGCACGAG +
Preference number: 5 (lower is better)
Translates to: FLFIISSSGCFSRKV*AAAMALGRLFAVHE
Trigger: CTCGTGCACCGCAAATAATCTCCCCAAAGCCATCGCCGCTGCTCACACCTTTCTACTGAAGCATCCTGATGACGAAATGATGAAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485310.1
CDS GCA 90 bp CTGCTGCATGACCTTGTCATTCTGATCAAAGAGCAGATAGCTGACTaGACAGGGGGCTGCATTCTTCAGGTCGTTCACTGCTATGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLHDLVILIKEQIAD*TGGCILQVVHCYGK
Trigger: CTTTCCATAGCAGTGAACGACCTGAAGAATGCAGCCCCCTGTGCAGTCAGCTATCTGCTCTTTGATCAGAATGACAAGGTCATGCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449224.1
CDS CCA 90 bp TTCCTGAACGCCAAGAGGAAGTCTCTTTGGTTGCTGTGGGCTAGCTaGTCTCCTCCAGTTCCAAGAGGTCATCCACATATTCCACAACTT +
Preference number: 5 (lower is better)
Translates to: FLNAKRKSLWLLWAS*SPPVPRGHPHIPQL
Trigger: AAGTTGTGGAATATGTGGATGACCTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTTGGCGTTCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS CCA 90 bp AGGACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAAGTCTCTTTaGTTGCTGTGGGCTAGCTGGTCTCCTCCAGTTCCAAGAGGTCAT +
Preference number: 5 (lower is better)
Translates to: RTKNLCFLNAKRKSL*LLWASWSPPVPRGH
Trigger: ATGACCTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp AGCCACATTTCTGCACTCTACACTCTCTACTCAACTTGTTTTTCAGTGGGTGCTTGCCCACGACTCTGCTaGGTCTCCCTGCTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: SHISALYTLYSTCFSVGACPRLC*VSLLFP
Trigger: AGGAAAGAGCAGGGAGACCAAGCAGAGTCGTGGGCA...AGCACCCACTGAAAAACAAGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGACTGGGAGTACAGATTTaGTGGACGTGGGCAACTTCA +
Preference number: 5 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERLGVQI*WTWATS
Trigger: TGAAGTTGCCCACGTCCACAAAATCTGTACTCCCAG...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp CTGGGCTGTTGGGAAAAGGACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAAACGAAAGCCAGCTATTaGTGTGGGGACAGTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LGCWEKDKESVFPERQEETKASY*CGDSVR
Trigger: CCTGACACTGTCCCCACACAAATAGCTGGCTTTCGT...TTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGTCCTTTTCCCAACAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAAACGGTCTTTGGAGTTaGGCCTACTGGCTGCCACCC +
Preference number: 5 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTNGLWS*AYWLPP
Trigger: GGGTGGCAGCCAGTAGGCCAAACTCCAAAGACCGTT...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS CCA 90 bp AATCTGTGTTTCCTGAACGCCAAGAGGAAGTCTCTTTGGTTGCTGTaGGCTAGCTGGTCTCCTCCAGTTCCAAGAGGTCATCCACATATT +
Preference number: 5 (lower is better)
Translates to: NLCFLNAKRKSLWLL*ASWSPPVPRGHPHI
Trigger: AATATGTGGATGACCTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTTGGCGTTCAGGAAACACAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGATGCAGCAGAATTGCTaGAACCCAAGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRMQQNC*NPRGGG
Trigger: ACCTCCGCCTCTTGGGTTCAAGCAATTCTGCTGCAT...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp AGGTGTGAAGATAGGAAAGGCAGGCTCACCCCTGATGACATGCAGTTAGAGAGAAGAGAACTCTCCACTTaGATTTGCAGCCAGAACCTC +
Preference number: 5 (lower is better)
Translates to: RCEDRKGRLTPDDMQLERRELST*ICSQNL
Trigger: GAGGTTCTGGCTGCAAATCAAAGTGGAGAGTTCTCT...TCTCTCTAACTGCATGTCATCAGGGGTGAGCCTGCCTTTCCTATCTTCACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGGAACACCACACTCTCTaGGTTTTCTCTGACCTTAAG +
Preference number: 5 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPEHHTL*VFSDLK
Trigger: CTTAAGGTCAGAGAAAACCAAGAGAGTGTGGTGTTC...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGCATCAGCAACGGTCTTaGGAGTTTGGCCTACTGGCT +
Preference number: 5 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRHQQRS*EFGLLA
Trigger: AGCCAGTAGGCCAAACTCCAAAGACCGTTGCTGATG...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS GCA 90 bp CTGCTGCATGACCTTGTCATTCTGATCAAAGAGCAGATAGCTGACTaGACAGGGGGCTGCATTCTTCAGGTCGTTCAACTTATAATAGGC +
Preference number: 5 (lower is better)
Translates to: LLHDLVILIKEQIAD*TGGCILQVVQLIIG
Trigger: GCCTATTATAAGTTGAACGACCTGAAGAATGCAGCCCCCTGTGCAGTCAGCTATCTGCTCTTTGATCAGAATGACAAGGTCATGCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GGTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAAATCCTTGAAGTCCTaGATCTCCCTGGAACCCTCG +
Preference number: 5 (lower is better)
Translates to: GKKGSYEHGEDKCEHEEDKSLKS*ISLEPS
Trigger: CGAGGGTTCCAGGGAGATCAAGGACTTCAAGGATTT...GTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp GTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAATGCAGCAGAATTGCTaGAACCCAAGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: VRKAAMNMGKTSVNMRKTMQQNC*NPRGGG
Trigger: ACCTCCGCCTCTTGGGTTCAAGCAATTCTGCTGCAT...TGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS-3UTR CAA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGATTGCAGGAAAAGTCTaGTTTCCCAAACGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKIAGKV*FPKRCA
Trigger: GGCACAGCGTTTGGGAAACAAGACTTTTCCTGCAAT...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AGTCAGTCACTTTTAAATACATGGGTGTACACAAACCTCCCCTCAGCCCTTCGCCTCTTCCTTCTGCCCTaGTCCACTAAAGTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: SQSLLNTWVYTNLPSALRLFLLP*STKVFH
Trigger: GTGAAAAACTTTAGTGGACAAGGGCAGAAGGAAGAG...GCGAAGGGCTGAGGGGAGGTTTGTGTACACCCATGTATTTAAAAGTGACTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGACTCTCCACTTTGATTaGCAGCCAGAACCTCCCATT +
Preference number: 5 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRTLHFD*QPEPPI
Trigger: AATGGGAGGTTCTGGCTGCAAATCAAAGTGGAGAGT...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp ACTGAAGTCACTTGCCTTCAAATGTACCCACACTCCCAGAGAACTTCTCACAGCACACAAGTGGCTTATTaGGAGAAGGGAATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: TEVTCLQMYPHSQRTSHSTQVAY*EKGMRL
Trigger: CAACCTCATTCCCTTCTCCAAATAAGCCACTTGTGT...GCTGTGAGAAGTTCTCTGGGAGTGTGGGTACATTTGAAGGCAAGTGACTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AGCCACATTTCTGCACTCTACACTCTCTACTCAACTTGTTTTTCAGTGGGTGCTGGTTTCATGGTAGGTTaGGAAGACCCAGCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: SHISALYTLYSTCFSVGAGFMVG*EDPAQF
Trigger: AAACTGGGCTGGGTCTTCCAAACCTACCATGAAACC...AGCACCCACTGAAAAACAAGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGATTTATTCCTATGTATaGGCTATCTCTTTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPIYSYV*AISFSL
Trigger: CAGGGAGAAAGAGATAGCCAATACATAGGAATAAAT...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GCTGCTCTTGATTCTTATTTCTGGGGTAGCAGTGGGTCAGTCAAGGCAAAGCCGTATCTGTTGGCCAAATaGCTTAATTCCTTCCTATTC +
Preference number: 5 (lower is better)
Translates to: AALDSYFWGSSGSVKAKPYLLAK*LNSFLF
Trigger: GAATAGGAAGGAATTAAGCAATTTGGCCAACAGATA...CGGCTTTGCCTTGACTGACCCACTGCTACCCCAGAAATAAGAATCAAGAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GATGCAAAGTGGGGCAAAAGCCACATTTCTGCACTCTACACTCTCTACTCAACTCATGGCTCTTTTCTGTaGCTTCTCAGTAATACTCAG +
Preference number: 5 (lower is better)
Translates to: DAKWGKSHISALYTLYSTHGSFL*LLSNTQ
Trigger: CTGAGTATTACTGAGAAGCAACAGAAAAGAGCCATG...AGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCTTTTGCCCCACTTTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGCAATGCATAAAACCTTaGGCTGAGGCTTACTTAAGG +
Preference number: 5 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRQCIKP*AEAYLR
Trigger: CCTTAAGTAAGCCTCAGCCAAAGGTTTTATGCATTG...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGGATGAAGACTCTGGAATCTATCTaGTATCTGTTGGCCAAATTG +
Preference number: 5 (lower is better)
Translates to: AAMNMGKTSVNMRKTGMKTLESI*YLLAKL
Trigger: CAATTTGGCCAACAGATACAAGATAGATTCCAGAGT...CTTCATCCCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS CCA 90 bp ATACATGGTAGCCACAAATTTCTCAACCGGATAGCCTCCTATAACTaGGGTGAGGTTCTCTTCACACTGTATTTTGCATTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: IHGSHKFLNRIASYN*GEVLFTLYFAFQNF
Trigger: GAAGTTCTGGAATGCAAAATACAGTGTGAAGAGAACCTCACCCCAGTTATAGGAGGCTATCCGGTTGAGAAATTTGTGGCTACCATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000485310.1
CDS-3UTR CAA 90 bp GGTAAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACGAAGGTATTAGTATGTaGCATATGTCGGTATGTGCT +
Preference number: 5 (lower is better)
Translates to: GKKGSYEHGEDKCEHEEDEGISM*HMSVCA
Trigger: AGCACATACCGACATATGCAACATACTAATACCTTC...GTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp GATGCAAAGTGGGGCAAAAGCCACATTTCTGCACTCTACACTCTCTACTCAACTTCTTCACACTGTATTTaGCATTCCAGAACTTCTACA +
Preference number: 5 (lower is better)
Translates to: DAKWGKSHISALYTLYSTSSHCI*HSRTST
Trigger: TGTAGAAGTTCTGGAATGCAAAATACAGTGTGAAGA...AGTTGAGTAGAGAGTGTAGAGTGCAGAAATGTGGCTTTTGCCCCACTTTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS-3UTR CAA 90 bp AAGAAAGGCAGCTATGAACATGGGGAAGACAAGTGTGAACATGAGGAAGACAGGTCTATCTTGTATCTGTaGGCCAAATTGCTTAATTCC +
Preference number: 5 (lower is better)
Translates to: KKGSYEHGEDKCEHEEDRSILYL*AKLLNS
Trigger: GGAATTAAGCAATTTGGCCAACAGATACAAGATAGA...CCTGTCTTCCTCATGTTCACACTTGTCTTCCCCATGTTCATAGCTGCCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS CAA 90 bp ACCTCGCGGCTGGGCTGGGACTGGCGGAAGGCTGGCAGGCCCTGCTaGCAGCGCTTGAGGCAGTGCGCGCGGCGCAGCAGGCCCCCGAAG +
Preference number: 6 (lower is better)
Translates to: TSRLGWDWRKAGRPC*QRLRQCARRSRPPK
Trigger: CTTCGGGGGCCTGCTGCGCCGCGCGCACTGCCTCAAGCGCTGCAAGCAGGGCCTGCCAGCCTTCCGCCAGTCCCAGCCCAGCCGCGAGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS CCA 72 bp CGGCGCTGGAAGTCCGCCAGCACCTCGCGGCTGGGCTaGGACTGGCGGAAGGCTGGCAGGCCCTGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: RRWKSASTSRLG*DWRKAGRPCLQ
Trigger: CTGCAAGCAGGGCCTGCCAGCCTTCCGCCAGTCCCAGCCCAGCCGCGAGGTGCTGGCGGACTTCCAGCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS CAA 72 bp GTCCCGTGGGAAGCTGCGGAAGCTGTAGCGTTCGTATaGGGCGCGCCCGGCGCGCAGCGCGCAGGCCACGCA +
Preference number: 6 (lower is better)
Translates to: VPWEAAEAVAFV*GAPGAQRAGHA
Trigger: TGCGTGGCCTGCGCGCTGCGCGCCGGGCGCGCCCAATACGAACGCTACAGCTTCCGCAGCTTCCCACGGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS CAA 90 bp CATCAGCTCGTCCCGTGGGAAGCTGCGGAAGCTGTAGCGTTCGTATaGGGCGCGCCCGGCGCGCAGCGCGCAGGCCACGCACAGCAGCGC +
Preference number: 6 (lower is better)
Translates to: HQLVPWEAAEAVAFV*GAPGAQRAGHAQQR
Trigger: GCGCTGCTGTGCGTGGCCTGCGCGCTGCGCGCCGGGCGCGCCCAATACGAACGCTACAGCTTCCGCAGCTTCCCACGGGACGAGCTGATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS GCA 72 bp CTTGAAGTCCTTGATCTCCCTGGAACCCTCGCAGGCTaGGAGACACTCGTAAAAGGCTTTGAAGAAGTCGGG +
Preference number: 6 (lower is better)
Translates to: LEVLDLPGTLAG*ETLVKGFEEVG
Trigger: CCCGACTTCTTCAAAGCCTTTTACGAGTGTCTCGCAGCCTGCGAGGGTTCCAGGGAGATCAAGGACTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320954.11
ENST00000449224.1
ENST00000485310.1
CDS CCA 72 bp CAGGATGCTTCAGTAGAAAGGTGTGAGCAGCGGCGATaGCTTTGGGGAGATTATTTGCGGTGCACGAGTTCC +
Preference number: 6 (lower is better)
Translates to: QDASVERCEQRR*LWGDYLRCTSS
Trigger: GGAACTCGTGCACCGCAAATAATCTCCCCAAAGCCATCGCCGCTGCTCACACCTTTCTACTGAAGCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485310.1
CDS CCA 72 bp TTCCTGAACGCCAAGAGGAAGTCTCTTTGGTTGCTGTaGGCTAGCTGGTCTCCTCCAGTTCCAAGAGGTCAT +
Preference number: 6 (lower is better)
Translates to: FLNAKRKSLWLL*ASWSPPVPRGH
Trigger: ATGACCTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTTGGCGTTCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS CCA 72 bp GCTTCAGTAGAAAGGTGTGAGCAGCGGCGATGGCTTTaGGGAGATTATTTGCGGTGCACGAGTTCCCCTTTA +
Preference number: 6 (lower is better)
Translates to: ASVERCEQRRWL*GDYLRCTSSPL
Trigger: TAAAGGGGAACTCGTGCACCGCAAATAATCTCCCCAAAGCCATCGCCGCTGCTCACACCTTTCTACTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485310.1
CDS CAA 72 bp CTGTGTTTCCTGAACGCCAAGAGGAAGTCTCTTTGGTaGCTGTGGGCTAGCTGGTCTCCTCCAGTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: LCFLNAKRKSLW*LWASWSPPVPR
Trigger: TCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTTGGCGTTCAGGAAACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS CAA 90 bp AGGGCCAGCTCCATGTCTGTGATGGATGTTCTCCAGTTCTCACCGTaGTATGCCCGCACTGCTCGGATGAACAGGCTTTCATATGACTTG +
Preference number: 6 (lower is better)
Translates to: RASSMSVMDVLQFSP*YARTARMNRLSYDL
Trigger: CAAGTCATATGAAAGCCTGTTCATCCGAGCAGTGCGGGCATACAACGGTGAGAACTGGAGAACATCCATCACAGACATGGAGCTGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320954.11
ENST00000449224.1
ENST00000485310.1
CDS GCA 72 bp GACCTTGTCATTCTGATCAAAGAGCAGATAGCTGACTaGACAGGGGGCTGCATTCTTCAGGTCGTTCACTGC +
Preference number: 6 (lower is better)
Translates to: DLVILIKEQIAD*TGGCILQVVHC
Trigger: GCAGTGAACGACCTGAAGAATGCAGCCCCCTGTGCAGTCAGCTATCTGCTCTTTGATCAGAATGACAAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449224.1
CDS CCA 72 bp GCCAAGAGGAAGTCTCTTTGGTTGCTGTGGGCTAGCTaGTCTCCTCCAGTTCCAAGAGGTCATCCACATATT +
Preference number: 6 (lower is better)
Translates to: AKRKSLWLLWAS*SPPVPRGHPHI
Trigger: AATATGTGGATGACCTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS CCA 72 bp AATCTGTGTTTCCTGAACGCCAAGAGGAAGTCTCTTTaGTTGCTGTGGGCTAGCTGGTCTCCTCCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: NLCFLNAKRKSL*LLWASWSPPVP
Trigger: TGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTTGGCGTTCAGGAAACACAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS CAA 72 bp TCCATGTCTGTGATGGATGTTCTCCAGTTCTCACCGTaGTATGCCCGCACTGCTCGGATGAACAGGCTTTCA +
Preference number: 6 (lower is better)
Translates to: SMSVMDVLQFSP*YARTARMNRLS
Trigger: TGAAAGCCTGTTCATCCGAGCAGTGCGGGCATACAACGGTGAGAACTGGAGAACATCCATCACAGACATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320954.11
ENST00000449224.1
ENST00000485310.1
CDS CAA 90 bp ACAAAGAATCTGTGTTTCCTGAACGCCAAGAGGAAGTCTCTTTGGTaGCTGTGGGCTAGCTGGTCTCCTCCAGTTCCAAGAGGTCATCCA +
Preference number: 6 (lower is better)
Translates to: TKNLCFLNAKRKSLW*LWASWSPPVPRGHP
Trigger: TGGATGACCTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAAAGAGACTTCCTCTTGGCGTTCAGGAAACACAGATTCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000449224.1
CDS GCA 72 bp GACCTTGTCATTCTGATCAAAGAGCAGATAGCTGACTaGACAGGGGGCTGCATTCTTCAGGTCGTTCAACTT +
Preference number: 6 (lower is better)
Translates to: DLVILIKEQIAD*TGGCILQVVQL
Trigger: AAGTTGAACGACCTGAAGAATGCAGCCCCCTGTGCAGTCAGCTATCTGCTCTTTGATCAGAATGACAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320954.11
CDS CCA 72 bp AGCCACAAATTTCTCAACCGGATAGCCTCCTATAACTaGGGTGAGGTTCTCTTCACACTGTATTTTGCATTC +
Preference number: 6 (lower is better)
Translates to: SHKFLNRIASYN*GEVLFTLYFAF
Trigger: GAATGCAAAATACAGTGTGAAGAGAACCTCACCCCAGTTATAGGAGGCTATCCGGTTGAGAAATTTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320954.11
ENST00000485310.1