RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRTAC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000095713

Ensembl transcript IDs: ENST00000309155.3, ENST00000370591.6, ENST00000370597.8, ENST00000413387.5, ENST00000436034.1, ENST00000468549.1

Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGCACAAGCCCACTTTCCCACTCCCCTGCTGGACTCCATCCGCTaGTTCATGTCCCACCCCTGCTCAGCAGCTGGGCTCGCAGCTCTC +
Preference number: 1 (lower is better)
Translates to: AAQAHFPTPLLDSIR*FMSHPCSAAGLAAL
Trigger: GAGAGCTGCGAGCCCAGCTGCTGAGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAAAGTGGGCTTGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413387.5
3UTR CCA 90 bp CTACTGTCTAGGCAGCAGCACAAGCCCACTTTCCCACTCCCCTGCTaGACTCCATCCGCTGGTTCATGTCCCACCCCTGCTCAGCAGCTG +
Preference number: 1 (lower is better)
Translates to: LLSRQQHKPTFPLPC*TPSAGSCPTPAQQL
Trigger: CAGCTGCTGAGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAAAGTGGGCTTGTGCTGCTGCCTAGACAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413387.5
3UTR GCA 90 bp AGCGCCATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTaGCCAGCACAGGGCCTGGCCTTACGAGTCTCCCTAATTGTTAGC +
Preference number: 1 (lower is better)
Translates to: SAIRAATLSAVITAM*PAQGLALRVSLIVS
Trigger: GCTAACAATTAGGGAGACTCGTAAGGCCAGGCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGATGGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR GCA 90 bp TTAGACCCACTGGAATGTAAGCGCCATCAGGGCAGCGACCCTGTCTaGTGTGATCACAGCTATGTGCCCAGCACAGGGCCTGGCCTTACG +
Preference number: 1 (lower is better)
Translates to: LDPLECKRHQGSDPV*CDHSYVPSTGPGLT
Trigger: CGTAAGGCCAGGCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGATGGCGCTTACATTCCAGTGGGTCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR CCA 90 bp TGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATaGTCATTAGACCCACTGGAATGTAAGCGCCATCAGGGCAGCGAC +
Preference number: 1 (lower is better)
Translates to: CAVTPPPWAHLCPKI*SLDPLECKRHQGSD
Trigger: GTCGCTGCCCTGATGGCGCTTACATTCCAGTGGGTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR-3UTR CCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCCTGGACTCCATCCGCTaGTTCATGTCCCACCCCTGC +
Preference number: 2 (lower is better)
Translates to: IRAATLSAVITAMCPAQGLDSIR*FMSHPC
Trigger: GCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAG...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR-3UTR CCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTTTCCCACTCCCCTGCTaGACTCCATCCGCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPFPLPC*TPSAGS
Trigger: TGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAA...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACCTGGACTCCATCCGCTaGTTCATGTCCCACCCCTGC +
Preference number: 2 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDLDSIR*FMSHPC
Trigger: GCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAG...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR-3UTR CCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGTTCCCACTCCCCTGCTaGACTCCATCCGCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLFPLPC*TPSAGS
Trigger: TGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAA...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR-3UTR GCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATAGGCAGCGACCCTGTCTaGTGTGATCACAGCTATGTG +
Preference number: 2 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIGSDPV*CDHSYV
Trigger: CACATAGCTGTGATCACAGCAGACAGGGTCGCTGCC...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACAGTAATGTGCATGGATaGGCTTGGGGAGGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDSNVHG*AWGGSS
Trigger: GCTAGACCCTCCCCAAGCCCATCCATGCACATTACT...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR-3UTR GCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTTTCATGTCCCACCCCTaGTCAGCAGCTGGGCTCGCA +
Preference number: 2 (lower is better)
Translates to: PESGFELRTLKSSYFLCSFMSHP*SAAGLA
Trigger: TGCGAGCCCAGCTGCTGAGCAGGGGTGGGACATGAA...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
3UTR-3UTR CCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGTGCATGGATGGGCTTaGGGAGGGTCTAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: PESGFELRTLKSSYFLCSVHGWA*GGSSSQ
Trigger: CTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR-3UTR GCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCGGCAGCGACCCTGTCTaGTGTGATCACAGCTATGTG +
Preference number: 2 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFGSDPV*CDHSYV
Trigger: CACATAGCTGTGATCACAGCAGACAGGGTCGCTGCC...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR-3UTR CCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCGTGACACCACCTCCCTaGGCACATCTGTGTCCTAAG +
Preference number: 2 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFVTPPP*AHLCPK
Trigger: CTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCAC...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR CCA 72 bp AGGCAGCAGCACAAGCCCACTTTCCCACTCCCCTGCTaGACTCCATCCGCTGGTTCATGTCCCACCCCTGCT +
Preference number: 3 (lower is better)
Translates to: RQQHKPTFPLPC*TPSAGSCPTPA
Trigger: AGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAAAGTGGGCTTGTGCTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413387.5
3UTR GCA 72 bp CTGGAATGTAAGCGCCATCAGGGCAGCGACCCTGTCTaGTGTGATCACAGCTATGTGCCCAGCACAGGGCCT +
Preference number: 3 (lower is better)
Translates to: LECKRHQGSDPV*CDHSYVPSTGP
Trigger: AGGCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGATGGCGCTTACATTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
3UTR CCA 72 bp ACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATaGTCATTAGACCCACTGGAATGTAAGCGCCATCAG +
Preference number: 3 (lower is better)
Translates to: TPPPWAHLCPKI*SLDPLECKRHQ
Trigger: CTGATGGCGCTTACATTCCAGTGGGTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCGGATGGGGCCCACGCTaGCGCCTCGGCCCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGGWGPR*RLGPLY
Trigger: ATACAGGGGGCCGAGGCGTCAGCGTGGGCCCCATCC...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCTCACCACACCCCCTGTaGCCCGGCCCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGSPHPL*PGPQAP
Trigger: TGGAGCCTGAGGGCCGGGGCACAGGGGGTGTGGTGA...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp TTCCCACTCCCCTGCTGGACTCCATCCGCTGGTTCATGTCCCACCCCTGCTCAGGTCCGGCAAAGAGGCTaGCCACACCACGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: FPLPCWTPSAGSCPTPAQVRQRG*PHHGPR
Trigger: ACGTGGCCCGTGGTGTGGCCAGCCTCTTTGCCGGAC...CTGAGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR CCA 90 bp TTCCCACTCCCCTGCTGGACTCCATCCGCTGGTTCATGTCCCACCCCTGCTCAGCGCGGAAGAGGCGGTTaGCTGAGGAGCTGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: FPLPCWTPSAGSCPTPAQRGRGG*LRSCGR
Trigger: CCTACCGCAGCTCCTCAGCCAACCGCCTCTTCCGCG...CTGAGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR CCA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCAGGACCGGTGCAGCAGTaGCAGCTCCAGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPGPVQQ*QLQQRQ
Trigger: CTGCCGCTGCTGGAGCTGCCACTGCTGCACCGGTCC...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR TCA 90 bp TTCCCACTCCCCTGCTGGACTCCATCCGCTGGTTCATGTCCCACCCCTGCTCAGCATGGAGAACTTGGGTaGGGCGATGTCCCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: FPLPCWTPSAGSCPTPAQHGELG*GDVPEA
Trigger: CGCTTCCGGGACATCGCCTCACCCAAGTTCTCCATG...CTGAGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR GCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCTCCCCACGCAGGCTGTaGCATCCTCGTTGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGSPRRL*HPRWAR
Trigger: ACGAGCCCAACGAGGATGGCACAGCCTGCGTGGGGA...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCCGTCCACACCAGCACTaGCCGCAGCGTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGRPHQH*PQRPQR
Trigger: CCTTTGTGGACGCTGCGGCCAGTGCTGGTGTGGACG...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCTCACCACACCCCCTGTaGCCCGGCCCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGSPHPL*PGPQAP
Trigger: TGGAGCCTGAGGGCCGGGGCACAGGGGGTGTGGTGA...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCAGGCCCCAAACCGGGTaGGTGGCACCACTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGRPQTG*VAPLAA
Trigger: GGCTGCGAGTGGTGCCACGCACCCGGTTTGGGGCCT...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCACGTCCACACCAGCACTaGCCGCAGCGTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPRPHQH*PQRPQR
Trigger: CCTTTGTGGACGCTGCGGCCAGTGCTGGTGTGGACG...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR CCA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCAACACCTCGCCCATGCTaGTGGGGGTCGTCCACACCA +
Preference number: 4 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPTPRPC*WGSSTP
Trigger: TGGTGTGGACGACCCCCACCAGCATGGGCGAGGTGT...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR CCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCAGTTCATCTCCCCGCTaGCCACGTTCCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGSSSPR*PRSGSP
Trigger: TGGTGAGCCGGAACGTGGCCAGCGGGGAGATGAACT...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACCGGGGGCCCGGTGACTaGCCGAGAGTCCCCACGCAG +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDRGPGD*PRVPTQ
Trigger: CTGCGTGGGGACTCTCGGCCAGTCACCGGGCCCCCG...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCGGGGGCCCGGTGACTaGCCGAGAGTCCCCACGCAG +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLRGPGD*PRVPTQ
Trigger: CTGCGTGGGGACTCTCGGCCAGTCACCGGGCCCCCG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTGGACCGGTGCAGCAGTaGCAGCTCCAGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPGPVQQ*QLQQRQ
Trigger: CTGCCGCTGCTGGAGCTGCCACTGCTGCACCGGTCC...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACGGATGGGGCCCACGCTaGCGCCTCGGCCCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDGWGPR*RLGPLY
Trigger: ATACAGGGGGCCGAGGCGTCAGCGTGGGCCCCATCC...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGCTCACACAGGTAGCCTaGGCCCCCGTCGATGATCCT +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLLTQVA*APVDDP
Trigger: AGGATCATCGACGGGGGCTCAGGCTACCTGTGTGAG...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCAATGAGGGGGTCTCCGTaGTCTCTACGGATGACGCGG +
Preference number: 4 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPMRGSP*SLRMTR
Trigger: CCGCGTCATCCGTAGAGAGCACGGAGACCCCCTCAT...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR GCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGATCTACGAGGACCGGTaGAGCAGTGGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLIYEDR*SSGSSS
Trigger: GCTGGAGCTGCCACTGCTGCACCGGTCCTCGTAGAT...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGTTCATGTCCCACCCCTaGTCAGCAGCTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLFMSHP*SAAGLA
Trigger: TGCGAGCCCAGCTGCTGAGCAGGGGTGGGACATGAA...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCACTTGTCGGTGTACGTaGCCACCCCCGAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGTCRCT*PPPRRH
Trigger: ATGCCTTCTCGGGGGTGGCCACGTACACCGACAAGT...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCGTCCGGCAAAGAGGCTaGCCACACCACGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGVRQRG*PHHGPR
Trigger: ACGTGGCCCGTGGTGTGGCCAGCCTCTTTGCCGGAC...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCTGCTGGGAGAATCCTTaGCCACACTCCAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGCWENP*PHSSGA
Trigger: AGCCCCACTGGAGTGTGGCCAAGGATTCTCCCAGCA...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGCTGGACTCCATCCGCTaGTTCATGTCCCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLLDSIR*FMSHPC
Trigger: GCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAG...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGCCCCTGTATATTTGCTaGCCCCAGCCTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLPLYIC*PQPQQP
Trigger: TGGCTGCTGAGGCTGGGGTCAGCAAATATACAGGGG...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCACCCCTGTATATTTGCTaGCCCCAGCCTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPPLYIC*PQPQQP
Trigger: TGGCTGCTGAGGCTGGGGTCAGCAAATATACAGGGG...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR TCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATACTGAGCCCCCGTCGATaGTCCTCAGGTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKILSPRR*SSGGPH
Trigger: GTGGGGCCCACCTGAGGATCATCGACGGGGGCTCAG...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACCTGAGCCCCCGTCGATaGTCCTCAGGTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDLSPRR*SSGGPH
Trigger: GTGGGGCCCACCTGAGGATCATCGACGGGGGCTCAG...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAGTGGGGCTGGGTCCTaGAGTGTGTCCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPSGAGS*SVSSSR
Trigger: CCGGGATGAGGACACACTTCAGGACCCAGCCCCACT...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCCTGTGCCATCCTCGTTaGGCTCGTAGCCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGLCHPR*ARSPDC
Trigger: GCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAG...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCGTCAGGAGGCAGAACTaGGTTGGTGACTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGVRRQN*VGDCSE
Trigger: TTCACTGCAGTCACCAACTCAGTTCTGCCTCCTGAC...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR TCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACCGATGTCGCAGGCTGTaGCCCCGATGGCGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDRCRRL*PRWRSP
Trigger: AGGGGAACGCCATCGGGGTCACAGCCTGCGACATCG...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACCAGCAGCCACATCTCTaGGCGCCAGAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDQQPHL*APECPG
Trigger: CCCGGGGCATTCTGGCGCTCAGAGATGTGGCTGCTG...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCGAGGATCTCCAGCACTaGGTTCATCTCCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGEDLQH*VHLPAG
Trigger: GCCAGCGGGGAGATGAACTCAGTGCTGGAGATCCTC...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCATGAGGGGGTCTCCGTaGTCTCTACGGATGACGCGG +
Preference number: 4 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGMRGSP*SLRMTR
Trigger: CCGCGTCATCCGTAGAGAGCACGGAGACCCCCTCAT...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTCCCCAGGCCAAAGTGTaGCACGGGCTCCATCTCACA +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPPQAKV*HGLHLT
Trigger: TGTGAGATGGAGCCCGTGGCACACTTTGGCCTGGGG...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGACGTCACCTCCACACTaGTGGCTTCATCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLTSPPH*WLHPSP
Trigger: TGGGGAAGGATGAAGCCAGCAGTGTGGAGGTGACGT...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCTCCTCATACTTCCTGTaGAGTGACACCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGSSYFL*SDTTSL
Trigger: CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGA...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATACCTCGCCCATGCTGGTaGGGGTCGTCCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIPRPCW*GSSTPA
Trigger: TGCTGGTGTGGACGACCCCCACCAGCATGGGCGAGG...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCGCGGAAGAGGCGGTTaGCTGAGGAGCTGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLRGRGG*LRSCGR
Trigger: CCTACCGCAGCTCCTCAGCCAACCGCCTCTTCCGCG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGGCCATGGACTCTCCATaGGACAAGATGAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLAMDSP*DKMRSS
Trigger: GCTGGACCTCATCTTGTCCCATGGAGAGTCCATGGC...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCGACTGCACTTCTTGTTaGTCCGGCACCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGDCTSC*SGTCSF
Trigger: GAAGCTACAGGTGCCGGACCAACAAGAAGTGCAGTC...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCGTGCATGGATGGGCTTaGGGAGGGTCTAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGVHGWA*GGSSSQ
Trigger: CTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCAGTAATGTGCATGGATaGGCTTGGGGAGGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGSNVHG*AWGGSS
Trigger: GCTAGACCCTCCCCAAGCCCATCCATGCACATTACT...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCACTGGATGCATTCATTaGTGTCTCCAGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGTGCIH*CLQWGW
Trigger: CCAGCCCCACTGGAGACACCAATGAATGCATCCAGT...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR GCA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCAGGACCTTCCCATGGGTaGTCATTTGCAGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPGPSHG*SFADRG
Trigger: GCCTCTATCTGCAAATGAGCACCCATGGGAAGGTCC...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR GCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATCCCCACGCAGGCTGTaGCATCCTCGTTGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKISPRRL*HPRWAR
Trigger: ACGAGCCCAACGAGGATGGCACAGCCTGCGTGGGGA...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACACACCTCGCCCATGCTaGTGGGGGTCGTCCACACCA +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDTPRPC*WGSSTP
Trigger: TGGTGTGGACGACCCCCACCAGCATGGGCGAGGTGT...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCCCAAACCGGGTGCGTaGCACCACTCGCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLPKPGA*HHSQPV
Trigger: AACTGGCTGCGAGTGGTGCCACGCACCCGGTTTGGG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCTGTGCCATCCTCGTTaGGCTCGTAGCCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLLCHPR*ARSPDC
Trigger: GCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGAGTAATGTGCATGGATaGGCTTGGGGAGGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLSNVHG*AWGGSS
Trigger: GCTAGACCCTCCCCAAGCCCATCCATGCACATTACT...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCAGCGCGTAGTAGGGTaGGCTGCGCTCATCGACCGC +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSQRVVG*AALIDR
Trigger: GCGGTCGATGAGCGCAGCTCACCCTACTACGCGCTG...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR TCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCACCACGGGCCACGTTaGCCTCATCGCTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLHHGPR*PHRSGC
Trigger: ACATCCTGAGCGATGAGGTCAACGTGGCCCGTGGTG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACCATGGAGAACTTGGGTaGGGCGATGTCCCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDHGELG*GDVPEA
Trigger: CGCTTCCGGGACATCGCCTCACCCAAGTTCTCCATG...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCTCACACAGGTAGCCTaGGCCCCCGTCGATGATCCT +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLLTQVA*APVDDP
Trigger: AGGATCATCGACGGGGGCTCAGGCTACCTGTGTGAG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGAGCTTCCATAGGTGTTaGCACATACGGGCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLSFHRC*HIRACL
Trigger: GAGACAAGCCCGTATGTGTCAACACCTATGGAAGCT...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTCCACCGACCCCAGATTaGGATCTCCATCTACGAGGA +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPPPTPD*DLHLRG
Trigger: TCCTCGTAGATGGAGATCTCAATCTGGGGTCGGTGG...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCAGCGTCCACAAAGGTaGCATCGCCCCGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLQRPQR*HRPGCG
Trigger: TCCACAACCGGGGCGATGGCACCTTTGTGGACGCTG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATACCCCAGGCCAAAGTGTaGCACGGGCTCCATCTCACA +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIPQAKV*HGLHLT
Trigger: TGTGAGATGGAGCCCGTGGCACACTTTGGCCTGGGG...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGATCTACGAGGACCGGTaGAGCAGTGGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLIYEDR*SSGSSS
Trigger: GCTGGAGCTGCCACTGCTGCACCGGTCCTCGTAGAT...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTGGCAGCGACCCTGTCTaGTGTGATCACAGCTATGTG +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPGSDPV*CDHSYV
Trigger: CACATAGCTGTGATCACAGCAGACAGGGTCGCTGCC...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCCTCGCCCATGCTGGTaGGGGTCGTCCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSPRPCW*GSSTPA
Trigger: TGCTGGTGTGGACGACCCCCACCAGCATGGGCGAGG...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGAACGGTAACATCCTaGACATGCCGGGGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLGTVTS*TCRGQR
Trigger: GCGCTGACCCCGGCATGTCCAGGATGTTACCGTTCC...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCTGGACTCCATCCGCTaGTTCATGTCCCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLLDSIR*FMSHPC
Trigger: GCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCGTGACACCACCTCCCTaGGCACATCTGTGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGVTPPP*AHLCPK
Trigger: CTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCAC...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTGTGACACCACCTCCCTaGGCACATCTGTGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPVTPPP*AHLCPK
Trigger: CTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCAC...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTCATTGGTGTCTCCAGTaGGGCTGGGTCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPHWCLQ*GWVLKC
Trigger: ACACTTCAGGACCCAGCCCCACTGGAGACACCAATG...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR CCA 90 bp TTCCCACTCCCCTGCTGGACTCCATCCGCTGGTTCATGTCCCACCCCTGCTCAGCACACGAATGGGAACTaGATGCATTCATTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: FPLPCWTPSAGSCPTPAQHTNGN*MHSLVS
Trigger: AGACACCAATGAATGCATCCAGTTCCCATTCGTGTG...CTGAGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR TCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATACTTTGCCATCACGGTTaGAGTCAGCCAGGGCGACAC +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKILCHHG*SQPGRH
Trigger: GTGTCGCCCTGGCTGACTTCAACCGTGATGGCAAAG...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATACTCCATGGGACAAGATaGGGTCCAGCATCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKILHGTR*GPASRL
Trigger: GAGACGGGATGCTGGACCTCATCTTGTCCCATGGAG...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCAGTGGGGCTGGGTCCTaGAGTGTGTCCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSSGAGS*SVSSSR
Trigger: CCGGGATGAGGACACACTTCAGGACCCAGCCCCACT...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCGTAGTAGGGTGAGCTaGGCTCATCGACCGCGATGT +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLRSRVS*AHRPRC
Trigger: ACATCGCGGTCGATGAGCGCAGCTCACCCTACTACG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR GCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTGGGGGCCATTCCAGTTaGCATAGACGATGTCCACTT +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPGGHSS*HRRCPL
Trigger: AAGTGGACATCGTCTATGGCAACTGGAATGGCCCCC...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATCCGGCTCACCATCTTaGCATCTGGCCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKISGSPS*HLATSP
Trigger: AGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGGA...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCATGGGTTCAGCCCGCTaGGACCCCTCAGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSMGSAR*DPSVMG
Trigger: GCCCATCACTGAGGGGTCCCAGCGGGCTGAACCCAT...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTACTTCAGAACCAGGTTaGGTCCATTGTACCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPTSEPG*VHCTPP
Trigger: TGGCGGGGTACAATGGACCCAACCTGGTTCTGAAGT...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATAAGGGCATGGAGAACTTaGGTGAGGCGATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIRAWRT*VRRCPG
Trigger: TCCGGGACATCGCCTCACCCAAGTTCTCCATGCCCT...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCCCAAACCGGGTGCGTaGCACCACTCGCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSPKPGA*HHSQPV
Trigger: AACTGGCTGCGAGTGGTGCCACGCACCCGGTTTGGG...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACTTGGCCACACTCCAGTaGGGCTGGGTCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDLATLQ*GWVLKC
Trigger: ACACTTCAGGACCCAGCCCCACTGGAGTGTGGCCAA...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGCACACGAATGGGAACTaGATGCATTCATTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLHTNGN*MHSLVS
Trigger: GGACACCAATGAATGCATCCAGTTCCCATTCGTGTG...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCATCGAGGGCACACGAATaGGAACTGGATGCATTCATT +
Preference number: 4 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPSRAHE*ELDAFI
Trigger: AATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGA...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR CCA 90 bp CCTTCACTACTGAGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTTCCACTGTGCCATCCTCGTTaGGCTCGTAGCCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: PSLLRLVVSIFCGVTSFPLCHPR*ARSPDC
Trigger: GCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAG...TGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCTCAGTAGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR TCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCAGGGTCCATTTCAATaGGGGCATCAGGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLQGPFQ*GHQGPH
Trigger: ATGTGGGCCCTGATGCCCTCATTGAAATGGACCCTG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATACAGGGTCCATTTCAATaGGGGCATCAGGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIQGPFQ*GHQGPH
Trigger: ATGTGGGCCCTGATGCCCTCATTGAAATGGACCCTG...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTCAGCAGCCACATCTCTaGGCGCCAGAATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSQQPHL*APECPG
Trigger: CCCGGGGCATTCTGGCGCTCAGAGATGTGGCTGCTG...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCAAGACGGACAGCGGCTaGGCCATGGACTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSKTDSG*AMDSPW
Trigger: CCATGGAGAGTCCATGGCTCAGCCGCTGTCCGTCTT...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACACGTCACCTCCACACTaGTGGCTTCATCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDTSPPH*WLHPSP
Trigger: TGGGGAAGGATGAAGCCAGCAGTGTGGAGGTGACGT...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CAAGCCTTCACTACTGAGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTGCTCGTAGCCCCGACTaGACTTCTTGTTGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: QAFTTEAGREHILWRYIIARSPD*TSCWSG
Trigger: GCCGGACCAACAAGAAGTGCAGTCGGGGCTACGAGC...AATGATGTAACGCCACAGAATATGCTCACGACCAGCCTCAGTAGTGAAGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACTTCACCAGCCGCTTCTaGGCCCGGTCATACTTCAGA +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDFTSRF*ARSYFR
Trigger: TCTGAAGTATGACCGGGCCCAGAAGCGGCTGGTGAA...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACCCATCGCCCCGGTTGTaGAAAAGGAAGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDPSPRL*KRKLGP
Trigger: TGGGCCTAACTTCCTTTTCCACAACCGGGGCGATGG...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATCTCCAGCTCCTaGTCATTGTCAAAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPKISSS*SLSKSA
Trigger: CGCCGACTTTGACAATGACCAGGAGCTGGAGATCTT...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATCGATGATCCTCAGGTaGGCCCCACTCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKISMILR*APLFLV
Trigger: CACCAAGAAGAGTGGGGCCCACCTGAGGATCATCGA...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCAGTTCATCTCCCCGCTaGCCACGTTCCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSSSSPR*PRSGSP
Trigger: TGGTGAGCCGGAACGTGGCCAGCGGGGAGATGAACT...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCGTGCATGGATGGGCTTaGGGAGGGTCTAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSVHGWA*GGSSSQ
Trigger: CTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCGGTTATTGCGGAACTTaGACAACTTGTCGGTGTACG +
Preference number: 4 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGGYCGT*TTCRCT
Trigger: CGTACACCGACAAGTTGTTCAAGTTCCGCAATAACC...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGGTTGACAAAGCCCAGTaGGAGGCACTTGTTTTTATT +
Preference number: 4 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLVDKAQ*EALVFI
Trigger: AATAAAAACAAGTGCCTCTCACTGGGCTTTGTCAAC...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATAGGACCTTCCCATGGGTaGTCATTTGCAGATAGAGGC +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIGPSHG*SFADRG
Trigger: GCCTCTATCTGCAAATGAGCACCCATGGGAAGGTCC...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATCCTCATACTTCCTGTaGAGTGACACCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKISSYFL*SDTTSL
Trigger: CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGA...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCATCCCCATTTTGCAGATaGGATAATGGATGGCTAACA +
Preference number: 4 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPSPFCR*DNGWLT
Trigger: TGTTAGCCATCCATTATCGCATCTGCAAAATGGGGA...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR GCA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCATGTGCCAGGTTTTGTaGCAAGTGTCTTACATACAT +
Preference number: 4 (lower is better)
Translates to: IRAATLSAVITAMCPAQGMCQVL*QVSYIH
Trigger: ATGTATGTAAGACACTTGGCACAAAACCTGGCACAT...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCAGGGCATGGAGAACTTaGGTGAGGCGATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSRAWRT*VRRCPG
Trigger: TCCGGGACATCGCCTCACCCAAGTTCTCCATGCCCT...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACTGGCCATTTTCCTGCTaGGAGAATCCTTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDWPFSC*ENPWPH
Trigger: GTGTGGCCAAGGATTCTCCCAGCAGGAAAATGGCCA...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATAGACTGCACTTCTTGTTaGTCCGGCACCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIDCTSC*SGTCSF
Trigger: GAAGCTACAGGTGCCGGACCAACAAGAAGTGCAGTC...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCACTGTGTCCTAAGATATaGTCATTAGACCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPLCPKI*SLDPLE
Trigger: TTCCAGTGGGTCTAATGACCATATCTTAGGACACAG...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR TCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGCTGGGACCCCTCAGTaGTGGGCAGAAACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSAGTPQ*WAETRA
Trigger: TGCTCTGGTTTCTGCCCATCACTGAGGGGTCCCAGC...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR TCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTAAGACGGACAGCGGCTaGGCCATGGACTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSKTDSG*AMDSPW
Trigger: CCATGGAGAGTCCATGGCTCAGCCGCTGTCCGTCTT...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGAGCTTCCATAGGTGTTaGCACATACGGGCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLSFHRC*HIRACL
Trigger: GAGACAAGCCCGTATGTGTCAACACCTATGGAAGCT...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCAGGCCCCAAACCGGGTaGGTGGCACCACTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFRPQTG*VAPLAA
Trigger: GGCTGCGAGTGGTGCCACGCACCCGGTTTGGGGCCT...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATACAATGGCCATTTTCCTaGTGGGAGAATCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIQWPFS*WENPWP
Trigger: TGGCCAAGGATTCTCCCAGCAGGAAAATGGCCATTG...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR GCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGCTCGTAGCCCCGACTaGACTTCTTGTTGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSARSPD*TSCWSG
Trigger: GCCGGACCAACAAGAAGTGCAGTCGGGGCTACGAGC...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp ACTACTGAGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTTCCAAAGAGTTTCCACGCAGGCTGTaGCATCCTCGTTGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: TTEAGREHILWRYIISKEFPRRL*HPRWAR
Trigger: ACGAGCCCAACGAGGATGGCACAGCCTGCGTGGAAA...CTCTTTGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCTCAGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR CCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGGACAGGGGAGGGCATaGAGAACTTGGGTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSGQGRA*RTWVRR
Trigger: TCGCCTCACCCAAGTTCTCCATGCCCTCCCCTGTCC...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACAAGATCTCCAGCTCCTaGTCATTGTCAAAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDKISSS*SLSKSA
Trigger: CGCCGACTTTGACAATGACCAGGAGCTGGAGATCTT...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACGGTTATTGCGGAACTTaGACAACTTGTCGGTGTACG +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDGYCGT*TTCRCT
Trigger: CGTACACCGACAAGTTGTTCAAGTTCCGCAATAACC...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTCTTTGCCATCACGGTTaGAGTCAGCCAGGGCGACAC +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSLCHHG*SQPGRH
Trigger: GTGTCGCCCTGGCTGACTTCAACCGTGATGGCAAAG...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCGCGACACCTCGCCCATaGTGGTGGGGGTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFATPRP*WWGSST
Trigger: TGTGGACGACCCCCACCAGCATGGGCGAGGTGTCGC...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGCGAATGGGAACTGGATaGATTCATTGGTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLRMGTG*IHWCPC
Trigger: GCATGGACACCAATGAATGCATCCAGTTCCCATTCG...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATCAAAGTCCCCATCATaGTCCACATCAGTAACTGCC +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKISKSPS*STSVTA
Trigger: GGCAGTTACTGATGTGGACCATGATGGGGACTTTGA...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTCCCGGGAGAGGTCACTaGCCTCAGGGTCCATTTCAA +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSPGRGH*PQGPFQ
Trigger: TTGAAATGGACCCTGAGGCCAGTGACCTCTCCCGGG...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGTCGAGGGCACACGAATaGGAACTGGATGCATTCATT +
Preference number: 4 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLSRAHE*ELDAFI
Trigger: AATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGA...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CAAGCCTTCACTACTGAGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTAGCTTCCATAGGTGTTaGCACATACGGGCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: QAFTTEAGREHILWRYIISFHRC*HIRACL
Trigger: GAGACAAGCCCGTATGTGTCAACACCTATGGAAGCT...AATGATGTAACGCCACAGAATATGCTCACGACCAGCCTCAGTAGTGAAGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR TCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTCCACCGACCCCAGATTaGGATCTCCATCTACGAGGA +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSPPTPD*DLHLRG
Trigger: TCCTCGTAGATGGAGATCTCAATCTGGGGTCGGTGG...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTCCATCGCCCCGGTTGTaGAAAAGGAAGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSPSPRL*KRKLGP
Trigger: TGGGCCTAACTTCCTTTTCCACAACCGGGGCGATGG...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGCCATGGACTCTCCATaGGACAAGATGAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSAMDSP*DKMRSS
Trigger: GCTGGACCTCATCTTGTCCCATGGAGAGTCCATGGC...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTTCGATGATCCTCAGGTaGGCCCCACTCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSSMILR*APLFLV
Trigger: CACCAAGAAGAGTGGGGCCCACCTGAGGATCATCGA...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACACTGGATGCATTCATTaGTGTCCATGCAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDTGCIH*CPCNGH
Trigger: ATGGCCATTGCATGGACACCAATGAATGCATCCAGT...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp CTACTGAGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTTCCAAAGAGTGACTGCACTTCTTGTTaGTCCGGCACCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLRLVVSIFCGVTSFPKSDCTSC*SGTCSF
Trigger: GAAGCTACAGGTGCCGGACCAACAAGAAGTGCAGTC...ACTCTTTGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCTCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR TCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCCACCACGGGCCACGTTaGCCTCATCGCTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFHHGPR*PHRSGC
Trigger: ACATCCTGAGCGATGAGGTCAACGTGGCCCGTGGTG...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCCAGCGTCCACAAAGGTaGCATCGCCCCGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFQRPQR*HRPGCG
Trigger: TCCACAACCGGGGCGATGGCACCTTTGTGGACGCTG...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGGGGGCCATTCCAGTTaGCATAGACGATGTCCACTT +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSGGHSS*HRRCPL
Trigger: AAGTGGACATCGTCTATGGCAACTGGAATGGCCCCC...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATAATTCATTGGTGTCCATaGAATGGCCATTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIIHWCP*NGHFPA
Trigger: AGCAGGAAAATGGCCATTGCATGGACACCAATGAAT...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR GCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCTTCATGTCCCACCCCTaGTCAGCAGCTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFFMSHP*SAAGLA
Trigger: TGCGAGCCCAGCTGCTGAGCAGGGGTGGGACATGAA...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCGGACAGGGGAGGGCATaGAGAACTTGGGTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFGQGRA*RTWVRR
Trigger: TCGCCTCACCCAAGTTCTCCATGCCCTCCCCTGTCC...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCCTCCATGGGACAAGATaGGGTCCAGCATCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFLHGTR*GPASRL
Trigger: GAGACGGGATGCTGGACCTCATCTTGTCCCATGGAG...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCGCAGCCAGTTGTTGTTaGAGCCCTGATTGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFAASCC*SPDCPG
Trigger: TCCGGGGCAATCAGGGCTTCAACAACAACTGGCTGC...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCTCCGGCTCACCATCTTaGCATCTGGCCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFSGSPS*HLATSP
Trigger: AGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGGA...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCCCCGGGAGAGGTCACTaGCCTCAGGGTCCATTTCAA +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFPGRGH*PQGPFQ
Trigger: TTGAAATGGACCCTGAGGCCAGTGACCTCTCCCGGG...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp AGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTTCCAAAGAGTGTTCTGTCGAGGGCACACGAATaGGAACTGGATGCATTCATT +
Preference number: 4 (lower is better)
Translates to: RLVVSIFCGVTSFPKSVLSRAHE*ELDAFI
Trigger: AATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGA...CAGAACACTCTTTGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR CCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCTTCCCACTCCCCTGCTaGACTCCATCCGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFFPLPC*TPSAGS
Trigger: TGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAA...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTAGGCATTATTGGTGTTaGGGAAGTAGATCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSRHYWC*GSRSPP
Trigger: GGGAGGAGATCTACTTCCTCAACACCAATAATGCCT...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR GCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCTCCCCATTTTGCAGATaGGATAATGGATGGCTAACA +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSSPFCR*DNGWLT
Trigger: TGTTAGCCATCCATTATCGCATCTGCAAAATGGGGA...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGTGTCCTAAGATATaGTCATTAGACCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSLCPKI*SLDPLE
Trigger: TTCCAGTGGGTCTAATGACCATATCTTAGGACACAG...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp AATAGATCTATGTTTTATAACAAGCCTTCACTACTGAGGCTGGTCGTGAGCATACATTGGTGTCTCCAGTaGGGCTGGGTCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: NRSMFYNKPSLLRLVVSIHWCLQ*GWVLKC
Trigger: ACACTTCAGGACCCAGCCCCACTGGAGACACCAATG...TATGCTCACGACCAGCCTCAGTAGTGAAGGCTTGTTATAAAACATAGATCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR CCA 90 bp CTACTGAGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTTCCAAAGAGTCACACGAATGGGAACTaGATGCATTCATTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLRLVVSIFCGVTSFPKSHTNGN*MHSLVS
Trigger: AGACACCAATGAATGCATCCAGTTCCCATTCGTGTG...ACTCTTTGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCTCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR GCA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCATGTGCCAGGTTTTGTaGCAAGTGTCTTACATACAT +
Preference number: 4 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSMCQVL*QVSYIH
Trigger: ATGTATGTAAGACACTTGGCACAAAACCTGGCACAT...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CCA 90 bp AATAGATCTATGTTTTATAACAAGCCTTCACTACTGAGGCTGGTCGTGAGCATAACTGGATGCATTCATTaGTGTCTCCAGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NRSMFYNKPSLLRLVVSITGCIH*CLQWGW
Trigger: CCAGCCCCACTGGAGACACCAATGAATGCATCCAGT...TATGCTCACGACCAGCCTCAGTAGTGAAGGCTTGTTATAAAACATAGATCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR TCA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGTTGACAAAGCCCAGTaGGAGGCACTTGTTTTTATT +
Preference number: 4 (lower is better)
Translates to: PESGFELRTLKSSYFLCSVDKAQ*EALVFI
Trigger: AATAAAAACAAGTGCCTCTCACTGGGCTTTGTCAAC...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR TCA 90 bp CTACTGAGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTTCCAAAGAGTTTAGGAGTATTACCATaGTATCAGAAAATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLRLVVSIFCGVTSFPKSLGVLP*YQKMAG
Trigger: CCCTGCCATTTTCTGATATCATGGTAATACTCCTAA...ACTCTTTGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCTCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR CCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCTTGGTGTCCATGCAATaGCCATTTTCCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFLVSMQ*PFSCWE
Trigger: CTCCCAGCAGGAAAATGGCCATTGCATGGACACCAA...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CCA 90 bp AGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTTCCAAAGAGTGTTCTGTTCCAAAGAGTGTTCTaGCTACAGGAGCATTCTATT +
Preference number: 4 (lower is better)
Translates to: RLVVSIFCGVTSFPKSVLFQRVF*LQEHSI
Trigger: AATAGAATGCTCCTGTAGCCAGAACACTCTTTGGAA...CAGAACACTCTTTGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR GCA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCGTCCACATCAGTAACTaGCACACCATAGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFVHISN*HTIVEL
Trigger: CAGCTCAACTATGGTGTGGCAGTTACTGATGTGGAC...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR GCA 90 bp AGATCTATGTTTTATAACAAGCCTTCACTACTGAGGCTGGTCGTGAGCATATTCATTTTCCAAGGAGATTaGAGAGACCAAGTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RSMFYNKPSLLRLVVSIFIFQGD*RDQVAR
Trigger: CCTTGCTACTTGGTCTCTGCAATCTCCTTGGAAAAT...GAATATGCTCACGACCAGCCTCAGTAGTGAAGGCTTGTTATAAAACATAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS TCA 90 bp GACCCCGATGGCGTTCCCCTGCCGGTCCCGCAGCGCGTAGTAGGGTaGGCTGCGCTCATCGACCGCGATGTTCACCAGCCGCTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: DPDGVPLPVPQRVVG*AALIDRDVHQPLLG
Trigger: GCCCAGAAGCGGCTGGTGAACATCGCGGTCGATGAGCGCAGCTCACCCTACTACGCGCTGCGGGACCGGCAGGGGAACGCCATCGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS GCA 90 bp CGATGGCGTTCCCCTGCCGGTCCCGCAGCGCGTAGTAGGGTGAGCTaGGCTCATCGACCGCGATGTTCACCAGCCGCTTCTGGGCCCGGT +
Preference number: 5 (lower is better)
Translates to: RWRSPAGPAARSRVS*AHRPRCSPAASGPG
Trigger: ACCGGGCCCAGAAGCGGCTGGTGAACATCGCGGTCGATGAGCGCAGCTCACCCTACTACGCGCTGCGGGACCGGCAGGGGAACGCCATCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS CCA 90 bp GCTTTATACAACTCCACTCGAGCGCGCCCGGTCTTATGTAAAGGCTaGCGGAGGCCCGCAGCCAATGGCGCGGCAGCTGGAGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: ALYNSTRARPVLCKG*RRPAANGAAAGAGG
Trigger: GCCCCCGGCTCCAGCTGCCGCGCCATTGGCTGCGGGCCTCCGCCAGCCTTTACATAAGACCGGGCGCGCTCGAGTGGAGTTGTATAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370591.6
CDS CCA 90 bp CCGGTGACTGGCCGAGAGTCCCCACGCAGGCTGTGCCATCCTCGTTaGGCTCGTAGCCCCGACTGCACTTCTTGTTGGTCCGGCACCTGT +
Preference number: 5 (lower is better)
Translates to: PVTGRESPRRLCHPR*ARSPDCTSCWSGTC
Trigger: ACAGGTGCCGGACCAACAAGAAGTGCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAGCCTGCGTGGGGACTCTCGGCCAGTCACCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp TTCCCACTCCCCTGCTGGACTCCATCCGCTGGTTCATGTCCCACCCCTGCTCAGAAGGCGTCGCCGGGATaGAGCTCCTCGATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: FPLPCWTPSAGSCPTPAQKASPG*SSSMRG
Trigger: CCCCCTCATCGAGGAGCTCAATCCCGGCGACGCCTT...CTGAGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS GCA 90 bp CTTAACCACCGACCCCAGATTGAGATCTCCATCTACGAGGACCGGTaGAGCAGTGGCAGCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LNHRPQIEISIYEDR*SSGSSSSGSSSGSG
Trigger: GCCACTGCCGCTGCTGCTGCCGCTGCTGGAGCTGCCACTGCTGCACCGGTCCTCGTAGATGGAGATCTCAATCTGGGGTCGGTGGTTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS CCA 90 bp GTTCATCTCCCCGCTGGCCACGTTCCGGCTCACCATCTTGCCATCTaGCCACGTCACCTCCACACTGCTGGCTTCATCCTTCCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VHLPAGHVPAHHLAI*PRHLHTAGFILPQA
Trigger: GGCCTGGGGAAGGATGAAGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGGAACGTGGCCAGCGGGGAGATGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS TCA 90 bp GTGCCACGGGCTCCATCTCACACAGGTAGCCTGAGCCCCCGTCGATaGTCCTCAGGTGGGCCCCACTCTTCTTGGTGTAGAGCACGACCT +
Preference number: 5 (lower is better)
Translates to: VPRAPSHTGSLSPRR*SSGGPHSSWCRARP
Trigger: AGGTCGTGCTCTACACCAAGAAGAGTGGGGCCCACCTGAGGATCATCGACGGGGGCTCAGGCTACCTGTGTGAGATGGAGCCCGTGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp TTCCCACTCCCCTGCTGGACTCCATCCGCTGGTTCATGTCCCACCCCTGCTCAGTTCCGGCTCACCATCTaGCCATCTGGCCACGTCACC +
Preference number: 5 (lower is better)
Translates to: FPLPCWTPSAGSCPTPAQFRLTI*PSGHVT
Trigger: GGTGACGTGGCCAGATGGCAAGATGGTGAGCCGGAA...CTGAGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS TCA 90 bp CCACAGAGCGTCCGGCAAAGAGGCTGGCCACACCACGGGCCACGTTaGCCTCATCGCTCAGGATGTCTTCCCACCGGTTATTGCGGAACT +
Preference number: 5 (lower is better)
Translates to: PQSVRQRGWPHHGPR*PHRSGCLPTGYCGT
Trigger: AGTTCCGCAATAACCGGTGGGAAGACATCCTGAGCGATGAGGTCAACGTGGCCCGTGGTGTGGCCAGCCTCTTTGCCGGACGCTCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS TCA 90 bp GCCATCTGGCCACGTCACCTCCACACTGCTGGCTTCATCCTTCCCTaGGGGGCAGAAGGAGAGAGCATCAGCAGCAGAGGAGAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: AIWPRHLHTAGFILP*GAEGESISSRGEQE
Trigger: CTCCTGCTCTCCTCTGCTGCTGATGCTCTCTCCTTCTGCCCCTCAGGGAAGGATGAAGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468549.1
CDS GCA 90 bp GCACTGAGTTCATCTCCCCGCTGGCCACGTTCCGGCTCACCATCTTaGCATCTGGCCACGTCACCTCCACACTGCTGGCTTCATCCTTCC +
Preference number: 5 (lower is better)
Translates to: ALSSSPRWPRSGSPS*HLATSPPHCWLHPS
Trigger: GGAAGGATGAAGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGGAACGTGGCCAGCGGGGAGATGAACTCAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
ENST00000468549.1
CDS TCA 90 bp GGCCATTCCAGTTGCCATAGACGATGTCCACTTTGCCATCACGGTTaGAGTCAGCCAGGGCGACACCTCGCCCATGCTGGTGGGGGTCGT +
Preference number: 5 (lower is better)
Translates to: GHSSCHRRCPLCHHG*SQPGRHLAHAGGGR
Trigger: ACGACCCCCACCAGCATGGGCGAGGTGTCGCCCTGGCTGACTTCAACCGTGATGGCAAAGTGGACATCGTCTATGGCAACTGGAATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CCA 90 bp CACCTAAAAAGGCCACTTGAGCCACGCAGGCTGTGCCATCCTCGTTaGGCTCGTAGCCCCGACTGCACTTCTTGTTGGTCCGGCACCTGT +
Preference number: 5 (lower is better)
Translates to: HLKRPLEPRRLCHPR*ARSPDCTSCWSGTC
Trigger: ACAGGTGCCGGACCAACAAGAAGTGCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAGCCTGCGTGGCTCAAGTGGCCTTTTTAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309155.3
ENST00000370591.6
CDS-3UTR CAA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCAACACCACGGGCCACGTaGACCTCATCGCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPTPRAT*TSSLRM
Trigger: CATCCTGAGCGATGAGGTCAACGTGGCCCGTGGTGT...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR CAA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGTTCCGGCTCACCATCTaGCCATCTGGCCACGTCACC +
Preference number: 5 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLFRLTI*PSGHVT
Trigger: GGTGACGTGGCCAGATGGCAAGATGGTGAGCCGGAA...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS CCA 90 bp GGCAGAACTGAGTTGGTGACTGCAGTGAACATGGGTTCAGCCCGCTaGGACCCCTCAGTGATGGGCAGAAACCAGAGCAGCAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GRTELVTAVNMGSAR*DPSVMGRNQSSSRN
Trigger: GTTCCTGCTGCTGCTCTGGTTTCTGCCCATCACTGAGGGGTCCCAGCGGGCTGAACCCATGTTCACTGCAGTCACCAACTCAGTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS CCA 90 bp GACCAAGTAGCAAGGTTCTTTCCACGCAGGCTGTGCCATCCTCGTTaGGCTCGTAGCCCCGACTGCACTTCTTGTTGGTCCGGCACCTGT +
Preference number: 5 (lower is better)
Translates to: DQVARFFPRRLCHPR*ARSPDCTSCWSGTC
Trigger: ACAGGTGCCGGACCAACAAGAAGTGCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAGCCTGCGTGGAAAGAACCTTGCTACTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR CAA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCTACTTCAGAACCAGGTaGGGTCCATTGTACCCCGCC +
Preference number: 5 (lower is better)
Translates to: IRAATLSAVITAMCPAQGYFRTR*GPLYPA
Trigger: GGCGGGGTACAATGGACCCAACCTGGTTCTGAAGTA...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CAA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCCGGAACTTGAACAACTaGTCGGTGTACGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: IRAATLSAVITAMCPAQGRNLNN*SVYVAT
Trigger: GGTGGCCACGTACACCGACAAGTTGTTCAAGTTCCG...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCACTTTGCCATCACGGTaGAAGTCAGCCAGGGCGACA +
Preference number: 5 (lower is better)
Translates to: IRAATLSAVITAMCPAQGTLPSR*KSARAT
Trigger: TGTCGCCCTGGCTGACTTCAACCGTGATGGCAAAGT...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTGAGGGCATGGAGAACTaGGGTGAGGCGATGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPEGMEN*GEAMSR
Trigger: CCGGGACATCGCCTCACCCAAGTTCTCCATGCCCTC...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp ATCAGGGCAGCGACCCTGTCTGCTGTGATCACAGCTATGTGCCCAGCACAGGGCTCCAGCTCCTGGTCATaGTCAAAGTCGGCGGTGATG +
Preference number: 5 (lower is better)
Translates to: IRAATLSAVITAMCPAQGSSSWS*SKSAVM
Trigger: CATCACCGCCGACTTTGACAATGACCAGGAGCTGGA...GCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTCGGCCCCCTGTATATTaGCTGACCCCAGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPRPPVY*LTPASA
Trigger: TGCTGAGGCTGGGGTCAGCAAATATACAGGGGGCCG...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCATCCAGCTCCTGGTCATaGTCAAAGTCGGCGGTGATG +
Preference number: 5 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPSSSWS*SKSAVM
Trigger: CATCACCGCCGACTTTGACAATGACCAGGAGCTGGA...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR CAA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACAAGGCGTCGCCGGGATaGAGCTCCTCGATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDKASPG*SSSMRG
Trigger: CCCCCTCATCGAGGAGCTCAATCCCGGCGACGCCTT...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS TCA 90 bp CCAGAATGCCCCGGGAGAGGTCACTGGCCTCAGGGTCCATTTCAATaGGGGCATCAGGGCCCACATTACCGTAGGCGTAATTGGCAATGT +
Preference number: 5 (lower is better)
Translates to: PECPGRGHWPQGPFQ*GHQGPHYRRRNWQC
Trigger: ACATTGCCAATTACGCCTACGGTAATGTGGGCCCTGATGCCCTCATTGAAATGGACCCTGAGGCCAGTGACCTCTCCCGGGGCATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CCA 90 bp CCAGCACTGGCCGCAGCGTCCACAAAGGTGCCATCGCCCCGGTTGTaGAAAAGGAAGTTAGGCCCATTCTCATTGTCGCAGAAGATATCC +
Preference number: 5 (lower is better)
Translates to: PALAAASTKVPSPRL*KRKLGPFSLSQKIS
Trigger: GGATATCTTCTGCGACAATGAGAATGGGCCTAACTTCCTTTTCCACAACCGGGGCGATGGCACCTTTGTGGACGCTGCGGCCAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCGTGCCATCGCCCCGGTaGTGGAAAAGGAAGTTAGGC +
Preference number: 5 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGVPSPR*WKRKLG
Trigger: GCCTAACTTCCTTTTCCACAACCGGGGCGATGGCAC...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACGAGGGCATGGAGAACTaGGGTGAGGCGATGTCCCGG +
Preference number: 5 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDEGMEN*GEAMSR
Trigger: CCGGGACATCGCCTCACCCAAGTTCTCCATGCCCTC...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGTTGACACATACGGGCTaGTCTCGAGGGCACACGAAT +
Preference number: 5 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLLTHTG*SRGHTN
Trigger: ATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAA...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS CCA 90 bp TCCATAGGTGTTGACACATACGGGCTTGTCTCGAGGGCACACGAATaGGAACTGGATGCATTCATTGGTGTCTCCAGTGGGGCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SIGVDTYGLVSRAHE*ELDAFIGVSSGAGS
Trigger: GGACCCAGCCCCACTGGAGACACCAATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAACACCTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413387.5
ENST00000436034.1
CDS-3UTR CAA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATAACCAGGTTGGGTCCATaGTACCCCGCCACGACGATC +
Preference number: 5 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKITRLGP*YPATTI
Trigger: GATCGTCGTGGCGGGGTACAATGGACCCAACCTGGT...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CAA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTCGGAACTTGAACAACTaGTCGGTGTACGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPRNLNN*SVYVAT
Trigger: GGTGGCCACGTACACCGACAAGTTGTTCAAGTTCCG...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGACACCACGGGCCACGTaGACCTCATCGCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLTPRAT*TSSLRM
Trigger: CATCCTGAGCGATGAGGTCAACGTGGCCCGTGGTGT...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp CTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACTTTGCCATCACGGTaGAAGTCAGCCAGGGCGACA +
Preference number: 5 (lower is better)
Translates to: LRTLKSSYFLCSDTTSLGTLPSR*KSARAT
Trigger: TGTCGCCCTGGCTGACTTCAACCGTGATGGCAAAGT...GCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATACCCATGGGTGCTCATTaGCAGATAGAGGCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKIPMGAH*QIEAVG
Trigger: CCCCACCGCCTCTATCTGCAAATGAGCACCCATGGG...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS TCA 90 bp ATAGTTGAGCTGGGTGGGATTACTGTCATAGTCAGGAGGCAGAACTaGGTTGGTGACTGCAGTGAACATGGGTTCAGCCCGCTGGGACCC +
Preference number: 5 (lower is better)
Translates to: IVELGGITVIVRRQN*VGDCSEHGFSPLGP
Trigger: GGGTCCCAGCGGGCTGAACCCATGTTCACTGCAGTCACCAACTCAGTTCTGCCTCCTGACTATGACAGTAATCCCACCCAGCTCAACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS TCA 90 bp GACTGCACTTCTTGTTGGTCCGGCACCTGTAGCTTCCATAGGTGTTaGCACATACGGGCTTGTCTCGAGGGCACACGAATGGGAACTGGA +
Preference number: 5 (lower is better)
Translates to: DCTSCWSGTCSFHRC*HIRACLEGTRMGTG
Trigger: TCCAGTTCCCATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAACACCTATGGAAGCTACAGGTGCCGGACCAACAAGAAGTGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
ENST00000436034.1
CDS-3UTR CAA 90 bp GTGCATGGATGGGCTTGGGGAGGGTCTAGCTCCCAGGCCTTTACATCCCTACTGCGGTTATTGCGGAACTaGAACAACTTGTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: VHGWAWGGSSSQAFTSLLRLLRN*NNLSVY
Trigger: GTACACCGACAAGTTGTTCAAGTTCCGCAATAACCG...CAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCACCCAGTGAGAGGCACTaGTTTTTATTGAGCCTTTAC +
Preference number: 5 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPPSERH*FLLSLY
Trigger: GTAAAGGCTCAATAAAAACAAGTGCCTCTCACTGGG...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS GCA 90 bp CGCCACGACGATCTCAAAGTCCCCATCATGGTCCACATCAGTAACTaGCACACCATAGTTGAGCTGGGTGGGATTACTGTCATAGTCAGG +
Preference number: 5 (lower is better)
Translates to: RHDDLKVPIMVHISN*HTIVELGGITVIVR
Trigger: CCTGACTATGACAGTAATCCCACCCAGCTCAACTATGGTGTGGCAGTTACTGATGTGGACCATGATGGGGACTTTGAGATCGTCGTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS-3UTR CAA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTTTAGGCCCATTCTCATaGTCGCAGAAGATATCCGAG +
Preference number: 5 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPLGPFS*SQKISE
Trigger: CTCGGATATCTTCTGCGACAATGAGAATGGGCCTAA...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp TTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCGTGCCATCGCCCCGGTaGTGGAAAAGGAAGTTAGGC +
Preference number: 5 (lower is better)
Translates to: FELRTLKSSYFLCSDTTSVPSPR*WKRKLG
Trigger: GCCTAACTTCCTTTTCCACAACCGGGGCGATGGCAC...GGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTCTGCTGGGAGAATCCTaGGCCACACTCCAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: PESGFELRTLKSSYFLCSLLGES*ATLQWG
Trigger: GCCCCACTGGAGTGTGGCCAAGGATTCTCCCAGCAG...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CAA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACTTGACACATACGGGCTaGTCTCGAGGGCACACGAAT +
Preference number: 5 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDLTHTG*SRGHTN
Trigger: ATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAA...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp CAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATTGAGATCTCCAACTATGTGCCAGGTTTaGTGCCAAGTGTCTTACATA +
Preference number: 5 (lower is better)
Translates to: QQLGSQLSLTTDPRLRSPTMCQV*CQVSYI
Trigger: TATGTAAGACACTTGGCACAAAACCTGGCACATAGT...TGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413387.5
CDS-3UTR CAA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTCGGCCCCCTGTATATTaGCTGACCCCAGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PESGFELRTLKSSYFLCSRPPVY*LTPASA
Trigger: TGCTGAGGCTGGGGTCAGCAAATATACAGGGGGCCG...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTCCCATGGGTGCTCATTaGCAGATAGAGGCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PESGFELRTLKSSYFLCSPMGAH*QIEAVG
Trigger: CCCCACCGCCTCTATCTGCAAATGAGCACCCATGGG...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTCCCAGTGAGAGGCACTaGTTTTTATTGAGCCTTTAC +
Preference number: 5 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPPSERH*FLLSLY
Trigger: GTAAAGGCTCAATAAAAACAAGTGCCTCTCACTGGG...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS CCA 90 bp TCCATAGGTGTTGACACATACGGGCTTGTCTCGAGGGCACACGAATaGGAACTGGATGCATTCATTGGTGTCCATGCAATGGCCATTTTC +
Preference number: 5 (lower is better)
Translates to: SIGVDTYGLVSRAHE*ELDAFIGVHAMAIF
Trigger: GAAAATGGCCATTGCATGGACACCAATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAACACCTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS-3UTR CAA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACCGGTTATTGCGGAACTaGAACAACTTGTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDRLLRN*NNLSVY
Trigger: GTACACCGACAAGTTGTTCAAGTTCCGCAATAACCG...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp CATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATCTTCCCACCGGTTATaGCGGAACTTGAACAACTTG +
Preference number: 5 (lower is better)
Translates to: HTSCAVTPPPWAHLCPKISSHRL*RNLNNL
Trigger: CAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGA...TATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp GAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGTCTTCCCACCGGTTATaGCGGAACTTGAACAACTTG +
Preference number: 5 (lower is better)
Translates to: ELRTLKSSYFLCSDTTSLSSHRL*RNLNNL
Trigger: CAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGA...CAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp GCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTAAGATATGGTCATTAGACAACTGGATGCATTCATaGGTGTCCATGCAATGGCCA +
Preference number: 5 (lower is better)
Translates to: AVTPPPWAHLCPKIWSLDNWMHS*VSMQWP
Trigger: TGGCCATTGCATGGACACCAATGAATGCATCCAGTT...GTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CAA 90 bp AGTCCTCATACTTCCTGTGCAGTGACACCACCTCCCTGGGCACATCTGTGTCCTACTATGTGCCAGGTTTaGTGCCAAGTGTCTTACATA +
Preference number: 5 (lower is better)
Translates to: SPHTSCAVTPPPWAHLCPTMCQV*CQVSYI
Trigger: TATGTAAGACACTTGGCACAAAACCTGGCACATAGT...AGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp AGGCTGGTCGTGAGCATATTCTGTGGCGTTACATCATTTCCAAAGAGTGTTCTGTTGACACATACGGGCTaGTCTCGAGGGCACACGAAT +
Preference number: 5 (lower is better)
Translates to: RLVVSIFCGVTSFPKSVLLTHTG*SRGHTN
Trigger: ATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAA...CAGAACACTCTTTGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR CAA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTACCACCGACCCCAGATaGAGATCTCCATCTACGAGG +
Preference number: 5 (lower is better)
Translates to: PESGFELRTLKSSYFLCSTTDPR*RSPSTR
Trigger: CCTCGTAGATGGAGATCTCAATCTGGGGTCGGTGGT...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS GCA 90 bp CAAAGAGTGTTCTGGCTACAGGAGCATTCTATTTTCCAAGGAGATTaGAGAGACCAAGTAGCAAGGTTCTTTCCACGCAGGCTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: QRVFWLQEHSIFQGD*RDQVARFFPRRLCH
Trigger: ATGGCACAGCCTGCGTGGAAAGAACCTTGCTACTTGGTCTCTGCAATCTCCTTGGAAAATAGAATGCTCCTGTAGCCAGAACACTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS-3UTR CAA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTGGAGGCAGAACTGAGTaGGTGACTGCAGTGAACATG +
Preference number: 5 (lower is better)
Translates to: PESGFELRTLKSSYFLCSGGRTE*VTAVNM
Trigger: CATGTTCACTGCAGTCACCAACTCAGTTCTGCCTCC...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370597.8
CDS-3UTR CAA 90 bp CCTGAATCAGGATTTGAACTCAGGACACTAAAGTCCTCATACTTCCTGTGCAGTTTAGGCCCATTCTCATaGTCGCAGAAGATATCCGAG +
Preference number: 5 (lower is better)
Translates to: PESGFELRTLKSSYFLCSLGPFS*SQKISE
Trigger: CTCGGATATCTTCTGCGACAATGAGAATGGGCCTAA...ACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS-3UTR CAA 90 bp GTGCCAAGTGTCTTACATACATTTAATCTAATCTCCACACTAACCCCAAGATTCACCACCGACCCCAGATaGAGATCTCCATCTACGAGG +
Preference number: 5 (lower is better)
Translates to: VPSVLHTFNLISTLTPRFTTDPR*RSPSTR
Trigger: CCTCGTAGATGGAGATCTCAATCTGGGGTCGGTGGT...GAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS TCA 72 bp GGCGTTCCCCTGCCGGTCCCGCAGCGCGTAGTAGGGTaGGCTGCGCTCATCGACCGCGATGTTCACCAGCCG +
Preference number: 6 (lower is better)
Translates to: GVPLPVPQRVVG*AALIDRDVHQP
Trigger: CGGCTGGTGAACATCGCGGTCGATGAGCGCAGCTCACCCTACTACGCGCTGCGGGACCGGCAGGGGAACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS CCA 72 bp CGGTTGAAGTCAGCCAGGGCGACACCTCGCCCATGCTaGTGGGGGTCGTCCACACCAGCACTGGCCGCAGCG +
Preference number: 6 (lower is better)
Translates to: RLKSARATPRPC*WGSSTPALAAA
Trigger: CGCTGCGGCCAGTGCTGGTGTGGACGACCCCCACCAGCATGGGCGAGGTGTCGCCCTGGCTGACTTCAACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CCA 72 bp TTGAAGTCAGCCAGGGCGACACCTCGCCCATGCTGGTaGGGGTCGTCCACACCAGCACTGGCCGCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: LKSARATPRPCW*GSSTPALAAAS
Trigger: GGACGCTGCGGCCAGTGCTGGTGTGGACGACCCCCACCAGCATGGGCGAGGTGTCGCCCTGGCTGACTTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CAA 72 bp GTGCCCCGGCCCTCAGGCTCCAAGGCGTCGCCGGGATaGAGCTCCTCGATGAGGGGGTCTCCGTGCTCTCTA +
Preference number: 6 (lower is better)
Translates to: VPRPSGSKASPG*SSSMRGSPCSL
Trigger: TAGAGAGCACGGAGACCCCCTCATCGAGGAGCTCAATCCCGGCGACGCCTTGGAGCCTGAGGGCCGGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS GCA 72 bp TCCCCTGCCGGTCCCGCAGCGCGTAGTAGGGTGAGCTaGGCTCATCGACCGCGATGTTCACCAGCCGCTTCT +
Preference number: 6 (lower is better)
Translates to: SPAGPAARSRVS*AHRPRCSPAAS
Trigger: AGAAGCGGCTGGTGAACATCGCGGTCGATGAGCGCAGCTCACCCTACTACGCGCTGCGGGACCGGCAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS GCA 72 bp TCACGGTTGAAGTCAGCCAGGGCGACACCTCGCCCATaGTGGTGGGGGTCGTCCACACCAGCACTGGCCGCA +
Preference number: 6 (lower is better)
Translates to: SRLKSARATPRP*WWGSSTPALAA
Trigger: TGCGGCCAGTGCTGGTGTGGACGACCCCCACCAGCATGGGCGAGGTGTCGCCCTGGCTGACTTCAACCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CCA 72 bp AACTCCACTCGAGCGCGCCCGGTCTTATGTAAAGGCTaGCGGAGGCCCGCAGCCAATGGCGCGGCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: NSTRARPVLCKG*RRPAANGAAAG
Trigger: TCCAGCTGCCGCGCCATTGGCTGCGGGCCTCCGCCAGCCTTTACATAAGACCGGGCGCGCTCGAGTGGAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370591.6
CDS CCA 72 bp GGCCGAGAGTCCCCACGCAGGCTGTGCCATCCTCGTTaGGCTCGTAGCCCCGACTGCACTTCTTGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: GRESPRRLCHPR*ARSPDCTSCWS
Trigger: GGACCAACAAGAAGTGCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAGCCTGCGTGGGGACTCTCGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS GCA 72 bp TCGCCGGGATTGAGCTCCTCGATGAGGGGGTCTCCGTaGTCTCTACGGATGACGCGGAAGAGGCGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: SPGLSSSMRGSP*SLRMTRKRRLA
Trigger: AGCCAACCGCCTCTTCCGCGTCATCCGTAGAGAGCACGGAGACCCCCTCATCGAGGAGCTCAATCCCGGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CAA 90 bp GCCACAGAGCGTCCGGCAAAGAGGCTGGCCACACCACGGGCCACGTaGACCTCATCGCTCAGGATGTCTTCCCACCGGTTATTGCGGAAC +
Preference number: 6 (lower is better)
Translates to: ATERPAKRLATPRAT*TSSLRMSSHRLLRN
Trigger: GTTCCGCAATAACCGGTGGGAAGACATCCTGAGCGATGAGGTCAACGTGGCCCGTGGTGTGGCCAGCCTCTTTGCCGGACGCTCTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS TCA 72 bp AAAGTGTGCCACGGGCTCCATCTCACACAGGTAGCCTaGGCCCCCGTCGATGATCCTCAGGTGGGCCCCACT +
Preference number: 6 (lower is better)
Translates to: KVCHGLHLTQVA*APVDDPQVGPT
Trigger: AGTGGGGCCCACCTGAGGATCATCGACGGGGGCTCAGGCTACCTGTGTGAGATGGAGCCCGTGGCACACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS GCA 72 bp GTGAGGCGATGTCCCGGAAGCGGACCTTCCCATGGGTaGTCATTTGCAGATAGAGGCGGTGGGGGCCATTCC +
Preference number: 6 (lower is better)
Translates to: VRRCPGSGPSHG*SFADRGGGGHS
Trigger: GGAATGGCCCCCACCGCCTCTATCTGCAAATGAGCACCCATGGGAAGGTCCGCTTCCGGGACATCGCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS GCA 72 bp TCATCTCCCCGCTGGCCACGTTCCGGCTCACCATCTTaGCATCTGGCCACGTCACCTCCACACTGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: SSPRWPRSGSPS*HLATSPPHCWL
Trigger: AAGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGGAACGTGGCCAGCGGGGAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
ENST00000468549.1
CDS CCA 72 bp CTTAGCTCCCCTGGCAAAGGCCCCAAACCGGGTGCGTaGCACCACTCGCAGCCAGTTGTTGTTGAAGCCCTG +
Preference number: 6 (lower is better)
Translates to: LSSPGKGPKPGA*HHSQPVVVEAL
Trigger: CAGGGCTTCAACAACAACTGGCTGCGAGTGGTGCCACGCACCCGGTTTGGGGCCTTTGCCAGGGGAGCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CCA 72 bp AGGCCACTTGAGCCACGCAGGCTGTGCCATCCTCGTTaGGCTCGTAGCCCCGACTGCACTTCTTGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: RPLEPRRLCHPR*ARSPDCTSCWS
Trigger: GGACCAACAAGAAGTGCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAGCCTGCGTGGCTCAAGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309155.3
ENST00000370591.6
CDS CAA 72 bp TTCATCTCCCCGCTGGCCACGTTCCGGCTCACCATCTaGCCATCTGGCCACGTCACCTCCACACTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: FISPLATFRLTI*PSGHVTSTLLA
Trigger: AGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGGAACGTGGCCAGCGGGGAGATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
ENST00000468549.1
CDS CAA 90 bp GCTCAGCAGCTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATaGAGATCTCCATCTACGAGGACCGGTGCAGCAGTGGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: AQQLGSQLSLTTDPR*RSPSTRTGAAVAAP
Trigger: TGGAGCTGCCACTGCTGCACCGGTCCTCGTAGATGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS TCA 72 bp GTCCGGCAAAGAGGCTGGCCACACCACGGGCCACGTTaGCCTCATCGCTCAGGATGTCTTCCCACCGGTTAT +
Preference number: 6 (lower is better)
Translates to: VRQRGWPHHGPR*PHRSGCLPTGY
Trigger: ATAACCGGTGGGAAGACATCCTGAGCGATGAGGTCAACGTGGCCCGTGGTGTGGCCAGCCTCTTTGCCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CCA 72 bp CTGCGCTCATCGACCGCGATGTTCACCAGCCGCTTCTaGGCCCGGTCATACTTCAGAACCAGGTTGGGTCCA +
Preference number: 6 (lower is better)
Translates to: LRSSTAMFTSRF*ARSYFRTRLGP
Trigger: TGGACCCAACCTGGTTCTGAAGTATGACCGGGCCCAGAAGCGGCTGGTGAACATCGCGGTCGATGAGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS CAA 72 bp GATGTCCCGGAAGCGGACCTTCCCATGGGTGCTCATTaGCAGATAGAGGCGGTGGGGGCCATTCCAGTTGCC +
Preference number: 6 (lower is better)
Translates to: DVPEADLPMGAH*QIEAVGAIPVA
Trigger: GGCAACTGGAATGGCCCCCACCGCCTCTATCTGCAAATGAGCACCCATGGGAAGGTCCGCTTCCGGGACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CAA 90 bp AGCACTGAGTTCATCTCCCCGCTGGCCACGTTCCGGCTCACCATCTaGCCATCTGGCCACGTCACCTCCACACTGCTGGCTTCATCCTTC +
Preference number: 6 (lower is better)
Translates to: STEFISPLATFRLTI*PSGHVTSTLLASSF
Trigger: GAAGGATGAAGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGGAACGTGGCCAGCGGGGAGATGAACTCAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
ENST00000468549.1
CDS TCA 72 bp TGTACGTGGCCACCCCCGAGAAGGCATTATTGGTGTTaGGGAAGTAGATCTCCTCCCGGCCGTCCCCGTCGA +
Preference number: 6 (lower is better)
Translates to: CTWPPPRRHYWC*GSRSPPGRPRR
Trigger: TCGACGGGGACGGCCGGGAGGAGATCTACTTCCTCAACACCAATAATGCCTTCTCGGGGGTGGCCACGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS TCA 72 bp GCTCCATCTCACACAGGTAGCCTGAGCCCCCGTCGATaGTCCTCAGGTGGGCCCCACTCTTCTTGGTGTAGA +
Preference number: 6 (lower is better)
Translates to: APSHTGSLSPRR*SSGGPHSSWCR
Trigger: TCTACACCAAGAAGAGTGGGGCCCACCTGAGGATCATCGACGGGGGCTCAGGCTACCTGTGTGAGATGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS TCA 72 bp CCACGTCACCTCCACACTGCTGGCTTCATCCTTCCCTaGGGGGCAGAAGGAGAGAGCATCAGCAGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: PRHLHTAGFILP*GAEGESISSRG
Trigger: TCCTCTGCTGCTGATGCTCTCTCCTTCTGCCCCTCAGGGAAGGATGAAGCCAGCAGTGTGGAGGTGACGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468549.1
CDS GCA 72 bp AGGCTGTGCCATCCTCGTTGGGCTCGTAGCCCCGACTaGACTTCTTGTTGGTCCGGCACCTGTAGCTTCCAT +
Preference number: 6 (lower is better)
Translates to: RLCHPRWARSPD*TSCWSGTCSFH
Trigger: ATGGAAGCTACAGGTGCCGGACCAACAAGAAGTGCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
ENST00000436034.1
CDS CCA 72 bp GCAAGGTTCTTTCCACGCAGGCTGTGCCATCCTCGTTaGGCTCGTAGCCCCGACTGCACTTCTTGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: ARFFPRRLCHPR*ARSPDCTSCWS
Trigger: GGACCAACAAGAAGTGCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAGCCTGCGTGGAAAGAACCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS CAA 72 bp CTGGGCTCGCAGCTCTCCTTAACCACCGACCCCAGATaGAGATCTCCATCTACGAGGACCGGTGCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: LGSQLSLTTDPR*RSPSTRTGAAV
Trigger: CACTGCTGCACCGGTCCTCGTAGATGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370597.8
ENST00000413387.5
CDS CAA 90 bp CGGGCCACGTTGACCTCATCGCTCAGGATGTCTTCCCACCGGTTATaGCGGAACTTGAACAACTTGTCGGTGTACGTGGCCACCCCCGAG +
Preference number: 6 (lower is better)
Translates to: RATLTSSLRMSSHRL*RNLNNLSVYVATPE
Trigger: CTCGGGGGTGGCCACGTACACCGACAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGACATCCTGAGCGATGAGGTCAACGTGGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS TCA 72 bp CCCGGGAGAGGTCACTGGCCTCAGGGTCCATTTCAATaGGGGCATCAGGGCCCACATTACCGTAGGCGTAAT +
Preference number: 6 (lower is better)
Translates to: PGRGHWPQGPFQ*GHQGPHYRRRN
Trigger: ATTACGCCTACGGTAATGTGGGCCCTGATGCCCTCATTGAAATGGACCCTGAGGCCAGTGACCTCTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CCA 72 bp GCCGCAGCGTCCACAAAGGTGCCATCGCCCCGGTTGTaGAAAAGGAAGTTAGGCCCATTCTCATTGTCGCAG +
Preference number: 6 (lower is better)
Translates to: AAASTKVPSPRL*KRKLGPFSLSQ
Trigger: CTGCGACAATGAGAATGGGCCTAACTTCCTTTTCCACAACCGGGGCGATGGCACCTTTGTGGACGCTGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CAA 72 bp CTGGCCGCAGCGTCCACAAAGGTGCCATCGCCCCGGTaGTGGAAAAGGAAGTTAGGCCCATTCTCATTGTCG +
Preference number: 6 (lower is better)
Translates to: LAAASTKVPSPR*WKRKLGPFSLS
Trigger: CGACAATGAGAATGGGCCTAACTTCCTTTTCCACAACCGGGGCGATGGCACCTTTGTGGACGCTGCGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS TCA 72 bp CGCTCAGGATGTCTTCCCACCGGTTATTGCGGAACTTaGACAACTTGTCGGTGTACGTGGCCACCCCCGAGA +
Preference number: 6 (lower is better)
Translates to: RSGCLPTGYCGT*TTCRCTWPPPR
Trigger: TCTCGGGGGTGGCCACGTACACCGACAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGACATCCTGAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS TCA 72 bp AGTTGCCATAGACGATGTCCACTTTGCCATCACGGTTaGAGTCAGCCAGGGCGACACCTCGCCCATGCTGGT +
Preference number: 6 (lower is better)
Translates to: SCHRRCPLCHHG*SQPGRHLAHAG
Trigger: ACCAGCATGGGCGAGGTGTCGCCCTGGCTGACTTCAACCGTGATGGCAAAGTGGACATCGTCTATGGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CAA 72 bp TCGCTCAGGATGTCTTCCCACCGGTTATTGCGGAACTaGAACAACTTGTCGGTGTACGTGGCCACCCCCGAG +
Preference number: 6 (lower is better)
Translates to: SLRMSSHRLLRN*NNLSVYVATPE
Trigger: CTCGGGGGTGGCCACGTACACCGACAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGACATCCTGAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CAA 90 bp ACACCAGCACTGGCCGCAGCGTCCACAAAGGTGCCATCGCCCCGGTaGTGGAAAAGGAAGTTAGGCCCATTCTCATTGTCGCAGAAGATA +
Preference number: 6 (lower is better)
Translates to: TPALAAASTKVPSPR*WKRKLGPFSLSQKI
Trigger: TATCTTCTGCGACAATGAGAATGGGCCTAACTTCCTTTTCCACAACCGGGGCGATGGCACCTTTGTGGACGCTGCGGCCAGTGCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS TCA 72 bp CTGGGTGGGATTACTGTCATAGTCAGGAGGCAGAACTaGGTTGGTGACTGCAGTGAACATGGGTTCAGCCCG +
Preference number: 6 (lower is better)
Translates to: LGGITVIVRRQN*VGDCSEHGFSP
Trigger: CGGGCTGAACCCATGTTCACTGCAGTCACCAACTCAGTTCTGCCTCCTGACTATGACAGTAATCCCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS TCA 72 bp TCTTGTTGGTCCGGCACCTGTAGCTTCCATAGGTGTTaGCACATACGGGCTTGTCTCGAGGGCACACGAATG +
Preference number: 6 (lower is better)
Translates to: SCWSGTCSFHRC*HIRACLEGTRM
Trigger: CATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAACACCTATGGAAGCTACAGGTGCCGGACCAACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
ENST00000436034.1
CDS CCA 72 bp GTTGACACATACGGGCTTGTCTCGAGGGCACACGAATaGGAACTGGATGCATTCATTGGTGTCTCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: VDTYGLVSRAHE*ELDAFIGVSSG
Trigger: CCCACTGGAGACACCAATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413387.5
ENST00000436034.1
CDS CAA 72 bp CCCCGGTTGTGGAAAAGGAAGTTAGGCCCATTCTCATaGTCGCAGAAGATATCCGAGGCACTGCTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: PRLWKRKLGPFS*SQKISEALLLR
Trigger: CCTCAGCAGCAGTGCCTCGGATATCTTCTGCGACAATGAGAATGGGCCTAACTTCCTTTTCCACAACCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CAA 90 bp TCGCTCAGGATGTCTTCCCACCGGTTATTGCGGAACTTGAACAACTaGTCGGTGTACGTGGCCACCCCCGAGAAGGCATTATTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: SLRMSSHRLLRNLNN*SVYVATPEKALLVL
Trigger: CAACACCAATAATGCCTTCTCGGGGGTGGCCACGTACACCGACAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGACATCCTGAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CAA 90 bp TTGACCTCATCGCTCAGGATGTCTTCCCACCGGTTATTGCGGAACTaGAACAACTTGTCGGTGTACGTGGCCACCCCCGAGAAGGCATTA +
Preference number: 6 (lower is better)
Translates to: LTSSLRMSSHRLLRN*NNLSVYVATPEKAL
Trigger: TAATGCCTTCTCGGGGGTGGCCACGTACACCGACAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGACATCCTGAGCGATGAGGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS GCA 72 bp ATGCATTCATTGGTGTCCATGCAATGGCCATTTTCCTaGTGGGAGAATCCTTGGCCACACTCCAGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: MHSLVSMQWPFS*WENPWPHSSGA
Trigger: AGCCCCACTGGAGTGTGGCCAAGGATTCTCCCAGCAGGAAAATGGCCATTGCATGGACACCAATGAATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000468549.1
CDS GCA 72 bp CGGGCTTGTCTCGAGGGCACACGAATGGGAACTGGATaGATTCATTGGTGTCCATGCAATGGCCATTTTCCT +
Preference number: 6 (lower is better)
Translates to: RACLEGTRMGTG*IHWCPCNGHFP
Trigger: AGGAAAATGGCCATTGCATGGACACCAATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGAGACAAGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS CAA 72 bp ATGTCTTCCCACCGGTTATTGCGGAACTTGAACAACTaGTCGGTGTACGTGGCCACCCCCGAGAAGGCATTA +
Preference number: 6 (lower is better)
Translates to: MSSHRLLRNLNN*SVYVATPEKAL
Trigger: TAATGCCTTCTCGGGGGTGGCCACGTACACCGACAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CAA 72 bp TTGACCTCATCGCTCAGGATGTCTTCCCACCGGTTATaGCGGAACTTGAACAACTTGTCGGTGTACGTGGCC +
Preference number: 6 (lower is better)
Translates to: LTSSLRMSSHRL*RNLNNLSVYVA
Trigger: GGCCACGTACACCGACAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGACATCCTGAGCGATGAGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
ENST00000413387.5
CDS CCA 72 bp CATACGGGCTTGTCTCGAGGGCACACGAATGGGAACTaGATGCATTCATTGGTGTCCATGCAATGGCCATTT +
Preference number: 6 (lower is better)
Translates to: HTGLSRGHTNGN*MHSLVSMQWPF
Trigger: AAATGGCCATTGCATGGACACCAATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGAGACAAGCCCGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS CCA 72 bp GTTGACACATACGGGCTTGTCTCGAGGGCACACGAATaGGAACTGGATGCATTCATTGGTGTCCATGCAATG +
Preference number: 6 (lower is better)
Translates to: VDTYGLVSRAHE*ELDAFIGVHAM
Trigger: CATTGCATGGACACCAATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309155.3
ENST00000370591.6
ENST00000370597.8
CDS CAA 90 bp CCAAAGAGTGTTCTGGCTACAGGAGCATTCTATTTTCCAAGGAGATaGCAGAGACCAAGTAGCAAGGTTCTTTCCACGCAGGCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: PKSVLATGAFYFPRR*QRPSSKVLSTQAVP
Trigger: TGGCACAGCCTGCGTGGAAAGAACCTTGCTACTTGGTCTCTGCAATCTCCTTGGAAAATAGAATGCTCCTGTAGCCAGAACACTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS CCA 72 bp GCCTTCACTACTGAGGCTGGTCGTGAGCATATTCTGTaGCGTTACATCATTTCCAAAGAGTGTTCTGGCTAC +
Preference number: 6 (lower is better)
Translates to: AFTTEAGREHIL*RYIISKECSGY
Trigger: GTAGCCAGAACACTCTTTGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCTCAGTAGTGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS CAA 90 bp TTGAGCACTGTTCTAAGTGCTAGGGAAATGGTGAACAAGACAGATTaGAGGTCCCTCCTCTCTGGAGCAATGCTGTCCAATAGACCTGTC +
Preference number: 6 (lower is better)
Translates to: LSTVLSAREMVNKTD*RSLLSGAMLSNRPV
Trigger: GACAGGTCTATTGGACAGCATTGCTCCAGAGAGGAGGGACCTCAAATCTGTCTTGTTCACCATTTCCCTAGCACTTAGAACAGTGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468549.1
CDS GCA 72 bp TTCTGGCTACAGGAGCATTCTATTTTCCAAGGAGATTaGAGAGACCAAGTAGCAAGGTTCTTTCCACGCAGG +
Preference number: 6 (lower is better)
Translates to: FWLQEHSIFQGD*RDQVARFFPRR
Trigger: CCTGCGTGGAAAGAACCTTGCTACTTGGTCTCTGCAATCTCCTTGGAAAATAGAATGCTCCTGTAGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS CAA 72 bp GTTCTGGCTACAGGAGCATTCTATTTTCCAAGGAGATaGCAGAGACCAAGTAGCAAGGTTCTTTCCACGCAG +
Preference number: 6 (lower is better)
Translates to: VLATGAFYFPRR*QRPSSKVLSTQ
Trigger: CTGCGTGGAAAGAACCTTGCTACTTGGTCTCTGCAATCTCCTTGGAAAATAGAATGCTCCTGTAGCCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1
CDS CAA 72 bp GTTCTAAGTGCTAGGGAAATGGTGAACAAGACAGATTaGAGGTCCCTCCTCTCTGGAGCAATGCTGTCCAAT +
Preference number: 6 (lower is better)
Translates to: VLSAREMVNKTD*RSLLSGAMLSN
Trigger: ATTGGACAGCATTGCTCCAGAGAGGAGGGACCTCAAATCTGTCTTGTTCACCATTTCCCTAGCACTTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468549.1
CDS CCA 72 bp TATTCTGTGGCGTTACATCATTTCCAAAGAGTGTTCTaGCTACAGGAGCATTCTATTTTCCAAGGAGATTGC +
Preference number: 6 (lower is better)
Translates to: YSVALHHFQRVF*LQEHSIFQGDC
Trigger: GCAATCTCCTTGGAAAATAGAATGCTCCTGTAGCCAGAACACTCTTTGGAAATGATGTAACGCCACAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436034.1