RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRP (Homo sapiens)

Ensembl gene IDs: ENSG00000132693

Ensembl transcript IDs: ENST00000255030.9, ENST00000368110.1, ENST00000368111.5, ENST00000368112.5, ENST00000437342.1, ENST00000473196.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACTTTACCTCCATTCTCAGGCGCTGAGGAGGGTGGAGCAGGCCTaGAATGCATATAGGGGAACAAAGGCCCAGAGACAGAGACGTGGG +
Preference number: 1 (lower is better)
Translates to: TLYLHSQALRRVEQA*NAYRGTKAQRQRRG
Trigger: CCCACGTCTCTGTCTCTGGGCCTTTGTTCCCCTATATGCATTGCAGGCCTGCTCCACCCTCCTCAGCGCCTGAGAATGGAGGTAAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255030.9
3UTR CCA 90 bp AACTATCCAACTATCCTCCAGATAGGGAGCTGGGGAGATGGGAGATaGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGT +
Preference number: 1 (lower is better)
Translates to: NYPTILQIGSWGDGR*APLTGHPVVHVHSC
Trigger: ACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCAGCTCCCTATCTGGAGGATAGTTGGATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
3UTR CCA 90 bp CCTCCACTTCCAGTTTGGCTTCTGTCCTCACAGTCTCTCTCCATGTaGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCCTCTC +
Preference number: 1 (lower is better)
Translates to: PPLPVWLLSSQSLSM*QTRWLLVVPGSRPL
Trigger: GAGAGGACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
3UTR GCA 90 bp AAGCAGATCTGCTCTGCTGGGGCAATTCTAATGGCCTTTCCAGTGTaGTTTGAGAAAGTGGAGGGACTGCGTGGTATTGCTGGGCTTCCC +
Preference number: 1 (lower is better)
Translates to: KQICSAGAILMAFPV*FEKVEGLRGIAGLP
Trigger: GGGAAGCCCAGCAATACCACGCAGTCCCTCCACTTTCTCAAAGCACACTGGAAAGGCCATTAGAATTGCCCCAGCAGAGCAGATCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255030.9
3UTR GCA 90 bp ACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATaGGGGGATGAAGAAAGAATTCACAGCCCCACAAGGTTCGTGTGG +
Preference number: 1 (lower is better)
Translates to: TLWFTSTLVAWVYWE*GDEERIHSPTRFVW
Trigger: CCACACGAACCTTGTGGGGCTGTGAATTCTTTCTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
3UTR CCA 90 bp CAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTaGGAATGCGGGGATGAAGAAAGAATTCACAGCCCCACAAGGTTC +
Preference number: 1 (lower is better)
Translates to: QDTLWFTSTLVAWVY*ECGDEERIHSPTRF
Trigger: GAACCTTGTGGGGCTGTGAATTCTTTCTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
3UTR CCA 90 bp TGTCCTCACAGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTaGTCCCAGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAG +
Preference number: 1 (lower is better)
Translates to: CPHSLSPCGKQDGYW*SQVHVLSAWKSSSK
Trigger: CTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACTGTGAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
3UTR CCA 90 bp TTCAGAGACTCCACGTGGTCAAGGCTCTGTTGTTTGTCAATCCCTTaGCTCCTCCACTTCCAGTTTGGCTTCTGTCCTCACAGTCTCTCT +
Preference number: 1 (lower is better)
Translates to: FRDSTWSRLCCLSIP*LLHFQFGFCPHSLS
Trigger: AGAGAGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGGAGCCAAGGGATTGACAAACAACAGAGCCTTGACCACGTGGAGTCTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR TCA 90 bp TATAGACCTGGGCAGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTaGTTCAGAGACTCCACGTGGTCAAGGCTCTGTTGTTTGTCAATC +
Preference number: 1 (lower is better)
Translates to: YRPGQSRCRSGSRQG*FRDSTWSRLCCLSI
Trigger: GATTGACAAACAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACTGCCCAGGTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR CCA 90 bp AAGGCTCTGTTGTTTGTCAATCCCTTGGCTCCTCCACTTCCAGTTTaGCTTCTGTCCTCACAGTCTCTCTCCATGTGGCAAACAAGATGG +
Preference number: 1 (lower is better)
Translates to: KALLFVNPLAPPLPV*LLSSQSLSMWQTRW
Trigger: CCATCTTGTTTGCCACATGGAGAGAGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGGAGCCAAGGGATTGACAAACAACAGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR-3UTR TCA 90 bp TGTCCTCACAGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGTCCATTCTCAGGCGCTaGGGAGGGTGGAGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: CPHSLSPCGKQDGYWWSQSILRR*GGWSRP
Trigger: AGGCCTGCTCCACCCTCCTCAGCGCCTGAGAATGGA...CTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACTGTGAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
3UTR-3UTR GCA 90 bp ATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGAGAAAGTGGAGGGACTaGGTGGTATTGCTGGGCTTC +
Preference number: 2 (lower is better)
Translates to: MGSSDRTPCGSRPLLWPGRKWRD*VVLLGF
Trigger: GAAGCCCAGCAATACCACGCAGTCCCTCCACTTTCT...CCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
3UTR-3UTR CCA 90 bp ATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGCCCACAAGGTTCGTGTaGAAAAGGGGAGGAGTTTCC +
Preference number: 2 (lower is better)
Translates to: MGSSDRTPCGSRPLLWPGPTRFV*KRGGVS
Trigger: GGAAACTCCTCCCCTTTTCCACACGAACCTTGTGGG...CCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
3UTR-3UTR CCA 90 bp TCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCCTAGGGAGCTGGGGAGATaGGAGATGGGCTCCTCTGAC +
Preference number: 2 (lower is better)
Translates to: SLSMWQTRWLLVVPGSRPRELGR*EMGSSD
Trigger: GTCAGAGGAGCCCATCTCCCATCTCCCCAGCTCCCT...AGGACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
3UTR-3UTR TCA 90 bp ATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTCAAGGCTCTGTTGGGAGATGGGCTCCTCTaGCAGGACACCCTGTGGTTC +
Preference number: 2 (lower is better)
Translates to: IWFQTRLIQRLHVVKALLGDGLL*QDTLWF
Trigger: GAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCC...CAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR-3UTR CCA 90 bp GACCTGGGCAGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTGATTCAGAGACTAGTGGAGGGACTGCGTaGTATTGCTGGGCTTCCCAT +
Preference number: 2 (lower is better)
Translates to: DLGSPGVDLVPDKADSETSGGTA*YCWASH
Trigger: ATGGGAAGCCCAGCAATACCACGCAGTCCCTCCACT...AGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACTGCCCAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
3UTR-3UTR CCA 90 bp GACCTGGGCAGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCCACAAGGTTCGTGTaGAAAAGGGGAGGAGTTTCC +
Preference number: 2 (lower is better)
Translates to: DLGSPGVDLVPDKADSETPTRFV*KRGGVS
Trigger: GGAAACTCCTCCCCTTTTCCACACGAACCTTGTGGG...AGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACTGCCCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR-3UTR CCA 90 bp CTGGTGGTCCCAGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATTCCACTCTTGTGGCCTaGGTATATTGGGAATGCGGG +
Preference number: 2 (lower is better)
Translates to: LVVPGSRPLSLEIQQQEDSTLVA*VYWECG
Trigger: CCCGCATTCCCAATATACCCAGGCCACAAGAGTGGA...ATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCTGGGACCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
3UTR-3UTR CCA 90 bp TTTGTCAATCCCTTGGCTCCTCCACTTCCAGTTTGGCTTCTGTCCTCACAGTCTTGGGGAGATGGGAGATaGGCTCCTCTGACAGGACAC +
Preference number: 2 (lower is better)
Translates to: FVNPLAPPLPVWLLSSQSWGDGR*APLTGH
Trigger: GTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCA...AGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGGAGCCAAGGGATTGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR-3UTR CCA 90 bp CTTTATTGGCTTATAGACCTGGGCAGTCCAGGTGTAGATCTGGTTCCAGACAAGTGCCCTCCTGCTTTCTaGGGGTCATGGGTGGGGAAT +
Preference number: 2 (lower is better)
Translates to: LYWLIDLGSPGVDLVPDKCPPAF*GSWVGN
Trigger: ATTCCCCACCCATGACCCCCAGAAAGCAGGAGGGCA...CTTGTCTGGAACCAGATCTACACCTGGACTGCCCAGGTCTATAAGCCAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255030.9
3UTR CAA 90 bp ATTCAGAGACTCCACGTGGTCAAGGCTCTGTTGTTTGTCAATCCCTaGGCTCCTCCACTTCCAGTTTGGCTTCTGTCCTCACAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: IQRLHVVKALLFVNP*APPLPVWLLSSQSL
Trigger: GAGAGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGGAGCCAAGGGATTGACAAACAACAGAGCCTTGACCACGTGGAGTCTCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR-3UTR TCA 90 bp ATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTCAAGGCTCTGTTGTTGGGAATGCGGGGATaGAGAAAGAATTCACAGCCC +
Preference number: 2 (lower is better)
Translates to: IWFQTRLIQRLHVVKALLLGMRG*RKNSQP
Trigger: GGGCTGTGAATTCTTTCTTCATCCCCGCATTCCCAA...CAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR-3UTR GCA 90 bp TCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCCATGGGACTGCGTGGTATTaGTGGGCTTCCCATTTCAGG +
Preference number: 2 (lower is better)
Translates to: SSQLGNPAARRCLTPKVHGTAWY*WASHFR
Trigger: CCTGAAATGGGAAGCCCAGCAATACCACGCAGTCCC...ATGGACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
3UTR-3UTR CCA 90 bp CTGGTGGTCCCAGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATTCACGTCCACTCTTGTaGCCTGGGTATATTGGGAAT +
Preference number: 2 (lower is better)
Translates to: LVVPGSRPLSLEIQQQEDSRPLL*PGYIGN
Trigger: ATTCCCAATATACCCAGGCCACAAGAGTGGACGTGA...ATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCTGGGACCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
3UTR-3UTR TCA 90 bp CGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCCAAACACCTCAAATTCTaGTTCTTTTGGACCGTTTCC +
Preference number: 2 (lower is better)
Translates to: RPLSLEIQQQEDVSLPKSKHLKF*FFWTVS
Trigger: GGAAACGGTCCAAAAGAATCAGAATTTGAGGTGTTT...GGACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255030.9
3UTR CCA 72 bp ACTATCCTCCAGATAGGGAGCTGGGGAGATGGGAGATaGGCTCCTCTGACAGGACACCCTGTGGTTCACGTC +
Preference number: 3 (lower is better)
Translates to: TILQIGSWGDGR*APLTGHPVVHV
Trigger: GACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCAGCTCCCTATCTGGAGGATAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
3UTR TCA 72 bp TCCCAGACCAGACACTTTACCTCCATTCTCAGGCGCTaGGGAGGGTGGAGCAGGCCTGCAATGCATATAGGG +
Preference number: 3 (lower is better)
Translates to: SQTRHFTSILRR*GGWSRPAMHIG
Trigger: CCCTATATGCATTGCAGGCCTGCTCCACCCTCCTCAGCGCCTGAGAATGGAGGTAAAGTGTCTGGTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
3UTR CCA 72 bp CTGTCCTCACAGTCTCTCTCCATGTGGCAAACAAGATaGCTACTGGTGGTCCCAGGTTCACGTCCTCTCAGC +
Preference number: 3 (lower is better)
Translates to: LSSQSLSMWQTR*LLVVPGSRPLS
Trigger: GCTGAGAGGACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACTGTGAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
3UTR TCA 72 bp GGGCAGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTaGTTCAGAGACTCCACGTGGTCAAGGCTCTGTTGT +
Preference number: 3 (lower is better)
Translates to: GQSRCRSGSRQG*FRDSTWSRLCC
Trigger: ACAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR CCA 72 bp CTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTaGGAATGCGGGGATGAAGAAAGAATTCACAGCCCC +
Preference number: 3 (lower is better)
Translates to: LWFTSTLVAWVY*ECGDEERIHSP
Trigger: GGGGCTGTGAATTCTTTCTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
3UTR CCA 72 bp CACAGTCTCTCTCCATGTGGCAAACAAGATGGCTACTaGTGGTCCCAGGTTCACGTCCTCTCAGCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: HSLSPCGKQDGY*WSQVHVLSAWK
Trigger: TTTCCAAGCTGAGAGGACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
3UTR CCA 72 bp TCCACGTGGTCAAGGCTCTGTTGTTTGTCAATCCCTTaGCTCCTCCACTTCCAGTTTGGCTTCTGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: STWSRLCCLSIP*LLHFQFGFCPH
Trigger: GTGAGGACAGAAGCCAAACTGGAAGTGGAGGAGCCAAGGGATTGACAAACAACAGAGCCTTGACCACGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR TCA 72 bp CACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATaGAGAAAGAATTCACAGCCCCACAAGGTTCGTGTG +
Preference number: 3 (lower is better)
Translates to: HSCGLGILGMRG*RKNSQPHKVRV
Trigger: CACACGAACCTTGTGGGGCTGTGAATTCTTTCTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
3UTR GCA 72 bp TTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATaGGGGGATGAAGAAAGAATTCACAGCCCCACAAGG +
Preference number: 3 (lower is better)
Translates to: FTSTLVAWVYWE*GDEERIHSPTR
Trigger: CCTTGTGGGGCTGTGAATTCTTTCTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
3UTR CCA 72 bp TTGTTTGTCAATCCCTTGGCTCCTCCACTTCCAGTTTaGCTTCTGTCCTCACAGTCTCTCTCCATGTGGCAA +
Preference number: 3 (lower is better)
Translates to: LFVNPLAPPLPV*LLSSQSLSMWQ
Trigger: TTGCCACATGGAGAGAGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGGAGCCAAGGGATTGACAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR TCA 90 bp CCTGTGAATGTGGGCAATGCCCTCCTGCTTTCTGGGGGTCATGGGTGGGGAATTTCCATTCTCAGGCGCTaGGGAGGGTGGAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PVNVGNALLLSGGHGWGISILRR*GGWSRP
Trigger: AGGCCTGCTCCACCCTCCTCAGCGCCTGAGAATGGA...AATTCCCCACCCATGACCCCCAGAAAGCAGGAGGGCATTGCCCACATTCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR TCA 90 bp CCTGTGAATGTGGGCAATGCCCTCCTGCTTTCTGGGGGTCATGGGTGGGGAATTGGAGATGGGCTCCTCTaGCAGGACACCCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: PVNVGNALLLSGGHGWGIGDGLL*QDTLWF
Trigger: GAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCC...AATTCCCCACCCATGACCCCCAGAAAGCAGGAGGGCATTGCCCACATTCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR TCA 90 bp GACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGGAGATGGGCTCCTCTaGCAGGACACCCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: DTLWFTSTLVAWVYWECGGDGLL*QDTLWF
Trigger: GAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCC...CCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp AGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGAGGGAGCTGGGGAGATaGGAGATGGGCTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RWEMGSSDRTPCGSRPLLRELGR*EMGSSD
Trigger: GTCAGAGGAGCCCATCTCCCATCTCCCCAGCTCCCT...CAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGAGGGAGCTGGGGAGATaGGAGATGGGCTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PCGSRPLLWPGYIGNAGMRELGR*EMGSSD
Trigger: GTCAGAGGAGCCCATCTCCCATCTCCCCAGCTCCCT...CATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp GGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCACGTCCTGCTGCCAGTaGTACAAGGGCCTGAATTCA +
Preference number: 4 (lower is better)
Translates to: GRWAPLTGHPVVHVHSCGTSCCQ*YKGLNS
Trigger: TGAATTCAGGCCCTTGTATCACTGGCAGCAGGACGT...GCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR TCA 90 bp ATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGACGTCCTGCTGCCAGTaGTACAAGGGCCTGAATTCA +
Preference number: 4 (lower is better)
Translates to: MGSSDRTPCGSRPLLWPGTSCCQ*YKGLNS
Trigger: TGAATTCAGGCCCTTGTATCACTGGCAGCAGGACGT...CCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR CCA 90 bp GATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTTGGGGAGATGGGAGATaGGCTCCTCTGACAGGACAC +
Preference number: 4 (lower is better)
Translates to: DGRWAPLTGHPVVHVHSCWGDGR*APLTGH
Trigger: GTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCA...ACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp GGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGTGGGGAGATGGGAGATaGGCTCCTCTGACAGGACAC +
Preference number: 4 (lower is better)
Translates to: GHPVVHVHSCGLGILGMRWGDGR*APLTGH
Trigger: GTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCA...CCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp AGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGGTCTGGCCAAAAGCATaGGAGAGGCTGGTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RWEMGSSDRTPCGSRPLLVWPKA*ERLVKT
Trigger: GGTCTTGACCAGCCTCTCTCATGCTTTTGGCCAGAC...CAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR TCA 90 bp CCCAGCATAGTTAACGAGCTCCCAGACCAGACACTTTACCTCCATTCTCAGGCGGAACTCCACGATCCCTaGGGCGGACTCCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PSIVNELPDQTLYLHSQAELHDP*GGLPAC
Trigger: ACAAGCTGGGAGTCCGCCTCAGGGATCGTGGAGTTC...CGCCTGAGAATGGAGGTAAAGTGTCTGGTCTGGGAGCTCGTTAACTATGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR TCA 90 bp AGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCGAACTCCACGATCCCTaGGGCGGACTCCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SLSPCGKQDGYWWSQVHVELHDP*GGLPAC
Trigger: ACAAGCTGGGAGTCCGCCTCAGGGATCGTGGAGTTC...GACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR TCA 90 bp CTGGGGAGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCATTGGGAATGCGGGGATaGAGAAAGAATTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: LGRWEMGSSDRTPCGSRPLGMRG*RKNSQP
Trigger: GGGCTGTGAATTCTTTCTTCATCCCCGCATTCCCAA...TGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp ACTGGTGGTCCCAGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGAGGAGATGGGCTCCTCTaGCAGGACACCCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: TGGPRFTSSQLGNPAARRGDGLL*QDTLWF
Trigger: GAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCC...TCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCTGGGACCACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGAGTGGAGGGACTGCGTaGTATTGCTGGGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PCGSRPLLWPGYIGNAGMSGGTA*YCWASH
Trigger: ATGGGAAGCCCAGCAATACCACGCAGTCCCTCCACT...CATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp TGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCCACAAGGTTCGTGTaGAAAAGGGGAGGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: WEMGSSDRTPCGSRPLLWPTRFV*KRGGVS
Trigger: GGAAACTCCTCCCCTTTTCCACACGAACCTTGTGGG...CCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CTGGTGGTCCCAGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATAGGGAGCTGGGGAGATaGGAGATGGGCTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LVVPGSRPLSLEIQQQEDRELGR*EMGSSD
Trigger: GTCAGAGGAGCCCATCTCCCATCTCCCCAGCTCCCT...ATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCTGGGACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp TCTGTCCTCACAGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGGAGCTGGGGAGATaGGAGATGGGCTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SVLTVSLHVANKMATGGPRELGR*EMGSSD
Trigger: GTCAGAGGAGCCCATCTCCCATCTCCCCAGCTCCCT...GGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACTGTGAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
3UTR CAA 72 bp CAGTGTGCTTTGAGAAAGTGGAGGGACTGCGTGGTATaGCTGGGCTTCCCATTTCAGGAGACCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QCALRKWRDCVV*LGFPFQETWAQ
Trigger: CTGGGCCCAGGTCTCCTGAAATGGGAAGCCCAGCAATACCACGCAGTCCCTCCACTTTCTCAAAGCACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR TCA 90 bp GGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGCTTTCCAGTGTGCTTTaGGAAAGTGGAGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: GHPVVHVHSCGLGILGMRLSSVL*ESGGTA
Trigger: CGCAGTCCCTCCACTTTCTCAAAGCACACTGGAAAG...CCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR GCA 90 bp ATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGGTGAACACTTCGCCTTaGACTTCATACTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: MGSSDRTPCGSRPLLWPGVNTSP*TSYFSA
Trigger: GGCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCAC...CCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR GCA 90 bp GGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGAGAAAGTGGAGGGACTaGGTGGTATTGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GHPVVHVHSCGLGILGMRRKWRD*VVLLGF
Trigger: GAAGCCCAGCAATACCACGCAGTCCCTCCACTTTCT...CCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp GGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGTCCACTCTTGTGGCCTaGGTATATTGGGAATGCGGG +
Preference number: 4 (lower is better)
Translates to: GHPVVHVHSCGLGILGMRSTLVA*VYWECG
Trigger: CCCGCATTCCCAATATACCCAGGCCACAAGAGTGGA...CCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp GACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGTCCACTCTTGTGGCCTaGGTATATTGGGAATGCGGG +
Preference number: 4 (lower is better)
Translates to: DTLWFTSTLVAWVYWECGSTLVA*VYWECG
Trigger: CCCGCATTCCCAATATACCCAGGCCACAAGAGTGGA...CCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp TCTGTCCTCACAGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCTGGGGAGATGGGAGATaGGCTCCTCTGACAGGACAC +
Preference number: 4 (lower is better)
Translates to: SVLTVSLHVANKMATGGPWGDGR*APLTGH
Trigger: GTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCA...GGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACTGTGAGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CCCAGCATAGTTAACGAGCTCCCAGACCAGACACTTTACCTCCATTCTCAGGCGCTCCAGATAGGGAGCTaGGGAGATGGGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: PSIVNELPDQTLYLHSQALQIGS*GDGRWA
Trigger: AGCCCATCTCCCATCTCCCCAGCTCCCTATCTGGAG...CGCCTGAGAATGGAGGTAAAGTGTCTGGTCTGGGAGCTCGTTAACTATGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp GGAGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTCCTCCACTTCCAGTTTaGCTTCTGTCCTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: GDGRWAPLTGHPVVHVHSPPLPV*LLSSQS
Trigger: AGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGG...AGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CTGGGGAGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCAATGGTGTTAATCTCATaGGTCGAGGACAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: LGRWEMGSSDRTPCGSRPMVLIS*VEDSSV
Trigger: CACGGAACTGTCCTCGACCCATGAGATTAACACCAT...TGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368110.1
3UTR CAA 72 bp TCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTaGTGGCCTGGGTATATTGGGAATGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SSDRTPCGSRPL*WPGYIGNAGMK
Trigger: CTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp TGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGAAGGTCTGGCCAAAAGCATaGGAGAGGCTGGTCAAGACC +
Preference number: 4 (lower is better)
Translates to: CGSRPLLWPGYIGNAGMKVWPKA*ERLVKT
Trigger: GGTCTTGACCAGCCTCTCTCATGCTTTTGGCCAGAC...CTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR TCA 90 bp ACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATACAGCTGGGGTTTGGTaGACACTTCGCCTTGCACTT +
Preference number: 4 (lower is better)
Translates to: TLWFTSTLVAWVYWECGDTAGVW*TLRLAL
Trigger: AAGTGCAAGGCGAAGTGTTCACCAAACCCCAGCTGT...ATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp TTGGTCCTGCTAGGAACACGTAACTATCCAACTATCCTCCAGATAGGGAGCTGGGGAGATGGGCTCCTCTaGCAGGACACCCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVLLGTRNYPTILQIGSWGDGLL*QDTLWF
Trigger: GAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCC...CCAGCTCCCTATCTGGAGGATAGTTGGATAGTTACGTGTTCCTAGCAGGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp ATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGAAGCATGAGAGAGGCTaGTCAAGACCAAGAAACACA +
Preference number: 4 (lower is better)
Translates to: MGSSDRTPCGSRPLLWPGKHERG*SRPRNT
Trigger: TGTGTTTCTTGGTCTTGACCAGCCTCTCTCATGCTT...CCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR CCA 90 bp AGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGGTGGCCTGGGTATATTaGGAATGCGGGGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: RWEMGSSDRTPCGSRPLLVAWVY*ECGDEE
Trigger: TTCTTCATCCCCGCATTCCCAATATACCCAGGCCAC...CAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp TGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGTCACGTCCACTCTTGTaGCCTGGGTATATTGGGAAT +
Preference number: 4 (lower is better)
Translates to: WEMGSSDRTPCGSRPLLWSRPLL*PGYIGN
Trigger: ATTCCCAATATACCCAGGCCACAAGAGTGGACGTGA...CCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp ATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTCAAGGCTCTGTTGCTCCAGATAGGGAGCTaGGGAGATGGGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: IWFQTRLIQRLHVVKALLLQIGS*GDGRWA
Trigger: AGCCCATCTCCCATCTCCCCAGCTCCCTATCTGGAG...CAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR TCA 90 bp TCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCCTCTACGTCCTGCTGCCAGTaGTACAAGGGCCTGAATTCA +
Preference number: 4 (lower is better)
Translates to: SLHVANKMATGGPRFTSSTSCCQ*YKGLNS
Trigger: TGAATTCAGGCCCTTGTATCACTGGCAGCAGGACGT...AGAGGACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000368112.5
CDS-3UTR TCA 90 bp ATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTCAAGGCTCTGTTGGTCTGGCCAAAAGCATaGGAGAGGCTGGTCAAGACC +
Preference number: 4 (lower is better)
Translates to: IWFQTRLIQRLHVVKALLVWPKA*ERLVKT
Trigger: GGTCTTGACCAGCCTCTCTCATGCTTTTGGCCAGAC...CAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR TCA 90 bp CATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTTCAGGACCCACAGCTGGGGTCTGGCCAAAAGCATaGGAGAGGCTGGTCAAGACC +
Preference number: 4 (lower is better)
Translates to: HNSILGKTVVGPSGPTAGVWPKA*ERLVKT
Trigger: GGTCTTGACCAGCCTCTCTCATGCTTTTGGCCAGAC...CCCAGCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCAAGGATTGAGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368111.5
CDS-3UTR TCA 90 bp TGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGAAGACAGCTGGGGTTTGGTaGACACTTCGCCTTGCACTT +
Preference number: 4 (lower is better)
Translates to: CGSRPLLWPGYIGNAGMKTAGVW*TLRLAL
Trigger: AAGTGCAAGGCGAAGTGTTCACCAAACCCCAGCTGT...CTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp ACTGGTGGTCCCAGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGAACAGCTGGGGTTTGGTaGACACTTCGCCTTGCACTT +
Preference number: 4 (lower is better)
Translates to: TGGPRFTSSQLGNPAARRTAGVW*TLRLAL
Trigger: AAGTGCAAGGCGAAGTGTTCACCAAACCCCAGCTGT...TCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCTGGGACCACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp AGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCACAGCTGGGGTTTGGTaGACACTTCGCCTTGCACTT +
Preference number: 4 (lower is better)
Translates to: SLSPCGKQDGYWWSQVHVTAGVW*TLRLAL
Trigger: AAGTGCAAGGCGAAGTGTTCACCAAACCCCAGCTGT...GACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp CCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGTTGGGAATGCGGGGATaGAGAAAGAATTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PLTGHPVVHVHSCGLGILLGMRG*RKNSQP
Trigger: GGGCTGTGAATTCTTTCTTCATCCCCGCATTCCCAA...CAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR GCA 90 bp ATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTCAAGGCTCTGTTGGGGACTGCGTGGTATTaGTGGGCTTCCCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: IWFQTRLIQRLHVVKALLGTAWY*WASHFR
Trigger: CCTGAAATGGGAAGCCCAGCAATACCACGCAGTCCC...CAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp TGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGAAGACAACAGCTTCTCCATaGTCACGTCCTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CGSRPLLWPGYIGNAGMKTTASP*SRPAAS
Trigger: ACTGGCAGCAGGACGTGACCATGGAGAAGCTGTTGT...CTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR CCA 90 bp CTGGTGGTCCCAGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATACAACAGCTTCTCCATaGTCACGTCCTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LVVPGSRPLSLEIQQQEDTTASP*SRPAAS
Trigger: ACTGGCAGCAGGACGTGACCATGGAGAAGCTGTTGT...ATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCTGGGACCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000368112.5
CDS-3UTR CCA 90 bp TGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGAAGCATGAGAGAGGCTaGTCAAGACCAAGAAACACA +
Preference number: 4 (lower is better)
Translates to: WEMGSSDRTPCGSRPLLWKHERG*SRPRNT
Trigger: TGTGTTTCTTGGTCTTGACCAGCCTCTCTCATGCTT...CCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR CCA 90 bp ATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGAAGTATCCGACTCTTTaGGAAACACAAAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: MGSSDRTPCGSRPLLWPGKYPTL*ETQKPS
Trigger: GGAAGGCTTTTGTGTTTCCCAAAGAGTCGGATACTT...CCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR CCA 90 bp ACTTTACCTCCATTCTCAGGCGCTGAGGAGGGTGGAGCAGGCCTGCAATGCATAACTGCGTGGTATTGCTaGGCTTCCCATTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TLPPFSGAEEGGAGLQCITAWYC*ASHFRR
Trigger: TCTCCTGAAATGGGAAGCCCAGCAATACCACGCAGT...TATGCATTGCAGGCCTGCTCCACCCTCCTCAGCGCCTGAGAATGGAGGTAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp TCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCCTCCCACAAGGTTCGTGTaGAAAAGGGGAGGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SLSMWQTRWLLVVPGSRPPTRFV*KRGGVS
Trigger: GGAAACTCCTCCCCTTTTCCACACGAACCTTGTGGG...AGGACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp AGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCTCCACTCTTGTGGCCTaGGTATATTGGGAATGCGGG +
Preference number: 4 (lower is better)
Translates to: SLSPCGKQDGYWWSQVHVSTLVA*VYWECG
Trigger: CCCGCATTCCCAATATACCCAGGCCACAAGAGTGGA...GACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp GGGAATGCGGGGATGAAGAAAGAATTCACAGCCCCACAAGGTTCGTGTGGAAAACTCCAGATAGGGAGCTaGGGAGATGGGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: GNAGMKKEFTAPQGSCGKLQIGS*GDGRWA
Trigger: AGCCCATCTCCCATCTCCCCAGCTCCCTATCTGGAG...TTTTCCACACGAACCTTGTGGGGCTGTGAATTCTTTCTTCATCCCCGCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp AGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTTCAGAGACTCCACGTaGTCAAGGCTCTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: RWEMGSSDRTPCGSRPLLFRDST*SRLCCL
Trigger: CAAACAACAGAGCCTTGACCACGTGGAGTCTCTGAA...CAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR TCA 90 bp TGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGAGTGATACAAGGGCCTaGATTCACTCCTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: WEMGSSDRTPCGSRPLLWSDTRA*IHSFGK
Trigger: TTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACT...CCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp TGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGTCGTTAACGGTGCTTTaGGGGATACATAGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: WEMGSSDRTPCGSRPLLWSLTVL*GIHRKY
Trigger: ATACTTCCTATGTATCCCTCAAAGCACCGTTAACGA...CCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR TCA 90 bp ACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGGGCCCAGCAGTTCTATaGCATGATGATGAGCACTCT +
Preference number: 4 (lower is better)
Translates to: TGHPVVHVHSCGLGILGMGPAVL*HDDEHS
Trigger: AGAGTGCTCATCATCATGTCATAGAACTGCTGGGCC...CATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR TCA 90 bp TGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGAAGTTGGGAATGCGGGGATaGAGAAAGAATTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: CGSRPLLWPGYIGNAGMKLGMRG*RKNSQP
Trigger: GGGCTGTGAATTCTTTCTTCATCCCCGCATTCCCAA...CTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR GCA 90 bp ACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGTGAACACTTCGCCTTaGACTTCATACTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TLWFTSTLVAWVYWECGDVNTSP*TSYFSA
Trigger: GGCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCAC...ATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR GCA 90 bp GGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCTGGGTATATTGGGAATaGGGGGATGAAGAAAGAATT +
Preference number: 4 (lower is better)
Translates to: GRWAPLTGHPVVHVHSCGWVYWE*GDEERI
Trigger: AATTCTTTCTTCATCCCCGCATTCCCAATATACCCA...GCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp ATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGCTGAATTCACTCCTTTaGAAAAGATGTATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: MGSSDRTPCGSRPLLWPGLNSLL*KRCIRL
Trigger: CAGCCGAATACATCTTTTCCAAAGGAGTGAATTCAG...CCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp TGTCAATCCCTTGGCTCCTCCACTTCCAGTTTGGCTTCTGTCCTCACAGTCTCTACAACAGCTTCTCCATaGTCACGTCCTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CQSLGSSTSSLASVLTVSTTASP*SRPAAS
Trigger: ACTGGCAGCAGGACGTGACCATGGAGAAGCTGTTGT...AGAGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGGAGCCAAGGGATTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp GGAGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTAAGTATCCGACTCTTTaGGAAACACAAAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GDGRWAPLTGHPVVHVHSKYPTL*ETQKPS
Trigger: GGAAGGCTTTTGTGTTTCCCAAAGAGTCGGATACTT...AGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR CCA 90 bp CTAGGAACACGTAACTATCCAACTATCCTCCAGATAGGGAGCTGGGGAGATGGGTCTCCCACCAGGGACTaGCTTCCTTCAAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LGTRNYPTILQIGSWGDGSPTRD*LPSKFP
Trigger: TGGGAACTTTGAAGGAAGCCAGTCCCTGGTGGGAGA...CCCATCTCCCCAGCTCCCTATCTGGAGGATAGTTGGATAGTTACGTGTTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CCA 90 bp AGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTCCCACAAGGTTCGTGTaGAAAAGGGGAGGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SPGVDLVPDKADSETPRGPTRFV*KRGGVS
Trigger: GGAAACTCCTCCCCTTTTCCACACGAACCTTGTGGG...ACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CCA 90 bp TGGGCAATGCCCTCCTGCTTTCTGGGGGTCATGGGTGGGGAATTAAATAGAAGATCCACTCTTGTGGCCTaGGTATATTGGGAATGCGGG +
Preference number: 4 (lower is better)
Translates to: WAMPSCFLGVMGGELNRRSTLVA*VYWECG
Trigger: CCCGCATTCCCAATATACCCAGGCCACAAGAGTGGA...TCTTCTATTTAATTCCCCACCCATGACCCCCAGAAAGCAGGAGGGCATTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp TTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAATGGGGAGATGGGAGATaGGCTCCTCTGACAGGACAC +
Preference number: 4 (lower is better)
Translates to: FTSSQLGNPAARRCLTPKWGDGR*APLTGH
Trigger: GTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCA...TTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CTGGTGGTCCCAGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATATGTGGCAAACAAGATaGCTACTGGTGGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVVPGSRPLSLEIQQQEDMWQTR*LLVVPG
Trigger: ACCTGGGACCACCAGTAGCCATCTTGTTTGCCACAT...ATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCTGGGACCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTTCAGGACCCACAGCTGGGTGGGAAGACTGTAGTTaGTCCTTCAGGACCCACAGC +
Preference number: 4 (lower is better)
Translates to: HNSILGKTVVGPSGPTAGWEDCS*SFRTHS
Trigger: GCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCA...CCCAGCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCAAGGATTGAGTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368111.5
CDS-3UTR TCA 90 bp CCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGTCGTTAACGGTGCTTTaGGGGATACATAGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: PCGSRPLLWPGYIGNAGMSLTVL*GIHRKY
Trigger: ATACTTCCTATGTATCCCTCAAAGCACCGTTAACGA...CATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR GCA 90 bp ACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGGTGAACACTTCGCCTTaGACTTCATACTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TGHPVVHVHSCGLGILGMVNTSP*TSYFSA
Trigger: GGCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCAC...CATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR GCA 90 bp TGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGAAGAAAGCAGATCTGCTCTaGTGGGGCAATTCTAATGGC +
Preference number: 4 (lower is better)
Translates to: CGSRPLLWPGYIGNAGMKKADLL*WGNSNG
Trigger: GCCATTAGAATTGCCCCAGCAGAGCAGATCTGCTTT...CTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp TGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCTGAATTCACTCCTTTaGAAAAGATGTATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: WEMGSSDRTPCGSRPLLWLNSLL*KRCIRL
Trigger: CAGCCGAATACATCTTTTCCAAAGGAGTGAATTCAG...CCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp ACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCCCCACAAGGTTCGTGTaGAAAAGGGGAGGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: TSSQLGNPAARRCLTPKVPTRFV*KRGGVS
Trigger: GGAAACTCCTCCCCTTTTCCACACGAACCTTGTGGG...GACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp AGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCCCTCCACTTCCAGTTTaGCTTCTGTCCTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: RFTSSQLGNPAARRCLTPPPLPV*LLSSQS
Trigger: AGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGG...GGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp AGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTCCTCCACTTCCAGTTTaGCTTCTGTCCTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: SPGVDLVPDKADSETPRGPPLPV*LLSSQS
Trigger: AGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGG...ACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
3UTR CAA 72 bp AGGCTGATTCAGAGACTCCACGTGGTCAAGGCTCTGTaGTTTGTCAATCCCTTGGCTCCTCCACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RLIQRLHVVKAL*FVNPLAPPLPV
Trigger: AACTGGAAGTGGAGGAGCCAAGGGATTGACAAACAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR TCA 90 bp ACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATAGTGATACAAGGGCCTaGATTCACTCCTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TLWFTSTLVAWVYWECGDSDTRA*IHSFGK
Trigger: TTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACT...ATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp CCCAGCATAGTTAACGAGCTCCCAGACCAGACACTTTACCTCCATTCTCAGGCGGTTAATCTCATCTGGTaGCAGCACAAAGTCCCACAT +
Preference number: 4 (lower is better)
Translates to: PSIVNELPDQTLYLHSQAVNLIW*QHKVPH
Trigger: ATGTGGGACTTTGTGCTGTCACCAGATGAGATTAAC...CGCCTGAGAATGGAGGTAAAGTGTCTGGTCTGGGAGCTCGTTAACTATGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp GATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTTGTCTTGTCTCTTGGTaGCATACGAGAAAATACTGT +
Preference number: 4 (lower is better)
Translates to: DGRWAPLTGHPVVHVHSCCLVSW*HTRKYC
Trigger: ACAGTATTTTCTCGTATGCCACCAAGAGACAAGACA...ACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp CTTTATTGGCTTATAGACCTGGGCAGTCCAGGTGTAGATCTGGTTCCAGACAAGTCTCCCACCAGGGACTaGCTTCCTTCAAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LYWLIDLGSPGVDLVPDKSPTRD*LPSKFP
Trigger: TGGGAACTTTGAAGGAAGCCAGTCCCTGGTGGGAGA...CTTGTCTGGAACCAGATCTACACCTGGACTGCCCAGGTCTATAAGCCAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CCA 90 bp GGGAATGCGGGGATGAAGAAAGAATTCACAGCCCCACAAGGTTCGTGTGGAAAAGTGGCCTGGGTATATTaGGAATGCGGGGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: GNAGMKKEFTAPQGSCGKVAWVY*ECGDEE
Trigger: TTCTTCATCCCCGCATTCCCAATATACCCAGGCCAC...TTTTCCACACGAACCTTGTGGGGCTGTGAATTCTTTCTTCATCCCCGCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CTAGGAACACGTAACTATCCAACTATCCTCCAGATAGGGAGCTGGGGAGATGGGTCACGTCCACTCTTGTaGCCTGGGTATATTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LGTRNYPTILQIGSWGDGSRPLL*PGYIGN
Trigger: ATTCCCAATATACCCAGGCCACAAGAGTGGACGTGA...CCCATCTCCCCAGCTCCCTATCTGGAGGATAGTTGGATAGTTACGTGTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp ACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCATGTGGCAAACAAGATaGCTACTGGTGGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TSSQLGNPAARRCLTPKVMWQTR*LLVVPG
Trigger: ACCTGGGACCACCAGTAGCCATCTTGTTTGCCACAT...GACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp GACCTGGGCAGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTGATTCAGAGACTTGTTTGTCAATCCCTTaGCTCCTCCACTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: DLGSPGVDLVPDKADSETCLSIP*LLHFQF
Trigger: AAACTGGAAGTGGAGGAGCCAAGGGATTGACAAACA...AGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACTGCCCAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CCA 90 bp AGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTTTCAGAGACTCCACGTaGTCAAGGCTCTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: SPGVDLVPDKADSETPRGFRDST*SRLCCL
Trigger: CAAACAACAGAGCCTTGACCACGTGGAGTCTCTGAA...ACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CCA 90 bp CATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTTCAGGACCCACAGCTGGGATGGTGTTAATCTCATaGGTCGAGGACAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: HNSILGKTVVGPSGPTAGMVLIS*VEDSSV
Trigger: CACGGAACTGTCCTCGACCCATGAGATTAACACCAT...CCCAGCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCAAGGATTGAGTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368111.5
CDS-3UTR TCA 90 bp TCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCCTAGTGATACAAGGGCCTaGATTCACTCCTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLSMWQTRWLLVVPGSRPSDTRA*IHSFGK
Trigger: TTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACT...AGGACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp TGTCCTCACAGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGAGTGATACAAGGGCCTaGATTCACTCCTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: CPHSLSPCGKQDGYWWSQSDTRA*IHSFGK
Trigger: TTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACT...CTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACTGTGAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp AGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCTCGTTAACGGTGCTTTaGGGGATACATAGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SLSPCGKQDGYWWSQVHVSLTVL*GIHRKY
Trigger: ATACTTCCTATGTATCCCTCAAAGCACCGTTAACGA...GACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000368112.5
CDS-3UTR TCA 90 bp ATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTCAAGGCTCTGTTGGTTAATCTCATCTGGTaGCAGCACAAAGTCCCACAT +
Preference number: 4 (lower is better)
Translates to: IWFQTRLIQRLHVVKALLVNLIW*QHKVPH
Trigger: ATGTGGGACTTTGTGCTGTCACCAGATGAGATTAAC...CAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR GCA 90 bp ACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCGTGAACACTTCGCCTTaGACTTCATACTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TSSQLGNPAARRCLTPKVVNTSP*TSYFSA
Trigger: GGCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCAC...GACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGCTGAATTCACTCCTTTaGAAAAGATGTATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PLTGHPVVHVHSCGLGILLNSLL*KRCIRL
Trigger: CAGCCGAATACATCTTTTCCAAAGGAGTGAATTCAG...CAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp CGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCCAAGCATGAGAGAGGCTaGTCAAGACCAAGAAACACA +
Preference number: 4 (lower is better)
Translates to: RPLSLEIQQQEDVSLPKSKHERG*SRPRNT
Trigger: TGTGTTTCTTGGTCTTGACCAGCCTCTCTCATGCTT...GGACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000368112.5
CDS-3UTR CCA 90 bp CATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTTCAGGACCCACAGCTGGGAAGCATGAGAGAGGCTaGTCAAGACCAAGAAACACA +
Preference number: 4 (lower is better)
Translates to: HNSILGKTVVGPSGPTAGKHERG*SRPRNT
Trigger: TGTGTTTCTTGGTCTTGACCAGCCTCTCTCATGCTT...CCCAGCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCAAGGATTGAGTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368111.5
CDS-3UTR CCA 90 bp TCCTGCTTTCTGGGGGTCATGGGTGGGGAATTAAATAGAAGATCAGCGCTTCCTTGTGCTTTGAGAAAGTaGAGGGACTGCGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: SCFLGVMGGELNRRSALPCALRK*RDCVVL
Trigger: CAATACCACGCAGTCCCTCCACTTTCTCAAAGCACA...AGGAAGCGCTGATCTTCTATTTAATTCCCCACCCATGACCCCCAGAAAGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CCA 90 bp TCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCCATGTGGCCTGGGTATATTaGGAATGCGGGGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: SSQLGNPAARRCLTPKVHVAWVY*ECGDEE
Trigger: TTCTTCATCCCCGCATTCCCAATATACCCAGGCCAC...ATGGACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp CATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTTCAGGACCCACAGCTGGGAGTGATACAAGGGCCTaGATTCACTCCTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HNSILGKTVVGPSGPTAGSDTRA*IHSFGK
Trigger: TTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACT...CCCAGCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCAAGGATTGAGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368111.5
CDS-3UTR TCA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTACGTCCTGCTGCCAGTaGTACAAGGGCCTGAATTCA +
Preference number: 4 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGTSCCQ*YKGLNS
Trigger: TGAATTCAGGCCCTTGTATCACTGGCAGCAGGACGT...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368111.5
ENST00000368112.5
CDS-3UTR TCA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTACAGCTGGGGTTTGGTaGACACTTCGCCTTGCACTT +
Preference number: 4 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGTAGVW*TLRLAL
Trigger: AAGTGCAAGGCGAAGTGTTCACCAAACCCCAGCTGT...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368111.5
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp TGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGAAGAAACACCTCAAATTCTaGTTCTTTTGGACCGTTTCC +
Preference number: 4 (lower is better)
Translates to: CGSRPLLWPGYIGNAGMKKHLKF*FFWTVS
Trigger: GGAAACGGTCCAAAAGAATCAGAATTTGAGGTGTTT...CTTCATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR GCA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTAGGGTGGAGCAGGCCTaGAATGCATATAGGGGAACA +
Preference number: 4 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGRVEQA*NAYRGT
Trigger: TGTTCCCCTATATGCATTGCAGGCCTGCTCCACCCT...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR GCA 90 bp AGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCTGGGTATATTGGGAATaGGGGGATGAAGAAAGAATT +
Preference number: 4 (lower is better)
Translates to: SLSPCGKQDGYWWSQVHVWVYWE*GDEERI
Trigger: AATTCTTTCTTCATCCCCGCATTCCCAATATACCCA...GACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp TCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCCTCTGAATTCACTCCTTTaGAAAAGATGTATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLSMWQTRWLLVVPGSRPLNSLL*KRCIRL
Trigger: CAGCCGAATACATCTTTTCCAAAGGAGTGAATTCAG...AGGACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CCA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTACAACAGCTTCTCCATaGTCACGTCCTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGTTASP*SRPAAS
Trigger: ACTGGCAGCAGGACGTGACCATGGAGAAGCTGTTGT...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368111.5
ENST00000368112.5
CDS-3UTR CCA 90 bp CATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTTCAGGACCCACAGCTGGGAAGTATCCGACTCTTTaGGAAACACAAAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HNSILGKTVVGPSGPTAGKYPTL*ETQKPS
Trigger: GGAAGGCTTTTGTGTTTCCCAAAGAGTCGGATACTT...CCCAGCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCAAGGATTGAGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368111.5
CDS-3UTR CCA 90 bp CCCAGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTTGTACAAATGTGTACTaGAGCTACTGTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: PRFTSSQLGNPAARRCLTCTNVY*SYCDFR
Trigger: CCTGAAGTCACAGTAGCTCCAGTACACATTTGTACA...AGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CCA 90 bp TTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAATCACGTCCACTCTTGTaGCCTGGGTATATTGGGAAT +
Preference number: 4 (lower is better)
Translates to: FTSSQLGNPAARRCLTPKSRPLL*PGYIGN
Trigger: ATTCCCAATATACCCAGGCCACAAGAGTGGACGTGA...TTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR GCA 90 bp AGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTTGGGTATATTGGGAATaGGGGGATGAAGAAAGAATT +
Preference number: 4 (lower is better)
Translates to: SPGVDLVPDKADSETPRGWVYWE*GDEERI
Trigger: AATTCTTTCTTCATCCCCGCATTCCCAATATACCCA...ACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CCA 90 bp CATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTTCAGGACCCACAGCTGGGCTGAATTCACTCCTTTaGAAAAGATGTATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: HNSILGKTVVGPSGPTAGLNSLL*KRCIRL
Trigger: CAGCCGAATACATCTTTTCCAAAGGAGTGAATTCAG...CCCAGCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCAAGGATTGAGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368111.5
CDS-3UTR CCA 90 bp ACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCAAGTATCCGACTCTTTaGGAAACACAAAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TSSQLGNPAARRCLTPKVKYPTL*ETQKPS
Trigger: GGAAGGCTTTTGTGTTTCCCAAAGAGTCGGATACTT...GACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000368112.5
CDS-3UTR CCA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTATGTGGCAAACAAGATaGCTACTGGTGGTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGMWQTR*LLVVPG
Trigger: ACCTGGGACCACCAGTAGCCATCTTGTTTGCCACAT...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR GCA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTGTGAACACTTCGCCTTaGACTTCATACTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGVNTSP*TSYFSA
Trigger: GGCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCAC...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368111.5
ENST00000368112.5
ENST00000437342.1
CDS-3UTR TCA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTTCGTTAACGGTGCTTTaGGGGATACATAGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGSLTVL*GIHRKY
Trigger: ATACTTCCTATGTATCCCTCAAAGCACCGTTAACGA...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368111.5
ENST00000368112.5
CDS-3UTR CCA 90 bp GTTCTTGGCAGTAACAACATATTTATACCTAGTGCTTCATTTTGCTCTGGAAAATGTACAAATGTGTACTaGAGCTACTGTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: VLGSNNIFIPSASFCSGKCTNVY*SYCDFR
Trigger: CCTGAAGTCACAGTAGCTCCAGTACACATTTGTACA...TTTTCCAGAGCAAAATGAAGCACTAGGTATAAATATGTTGTTACTGCCAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CAA 90 bp CTGGGGAGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCAGGCCACAGCTGGGGTTaGGTGAACACTTCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LGRWEMGSSDRTPCGSRPGHSWG*VNTSPC
Trigger: GCAAGGCGAAGTGTTCACCAAACCCCAGCTGTGGCC...TGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp GGAGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTGGCCACAGCTGGGGTTaGGTGAACACTTCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: GDGRWAPLTGHPVVHVHSGHSWG*VNTSPC
Trigger: GCAAGGCGAAGTGTTCACCAAACCCCAGCTGTGGCC...AGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp CCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGGGCCACAGCTGGGGTTaGGTGAACACTTCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: PCGSRPLLWPGYIGNAGMGHSWG*VNTSPC
Trigger: GCAAGGCGAAGTGTTCACCAAACCCCAGCTGTGGCC...CATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp ATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGGGTTCACGTCCACTCTaGTGGCCTGGGTATATTGGG +
Preference number: 5 (lower is better)
Translates to: MGSSDRTPCGSRPLLWPGGSRPL*WPGYIG
Trigger: CCCAATATACCCAGGCCACAAGAGTGGACGTGAACC...CCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp GGAGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTGGTTCACGTCCACTCTaGTGGCCTGGGTATATTGGG +
Preference number: 5 (lower is better)
Translates to: GDGRWAPLTGHPVVHVHSGSRPL*WPGYIG
Trigger: CCCAATATACCCAGGCCACAAGAGTGGACGTGAACC...AGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp CTGGGGAGATGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACACACAGTGAAGGCTTaGAGAGGCTTCGTTAACGGT +
Preference number: 5 (lower is better)
Translates to: LGRWEMGSSDRTPCGSRPHTVKA*RGFVNG
Trigger: ACCGTTAACGAAGCCTCTCAAAGCCTTCACTGTGTG...TGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCATCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR CAA 90 bp GACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGAGGGACTGCGTGGTATaGCTGGGCTTCCCATTTCAG +
Preference number: 5 (lower is better)
Translates to: DTLWFTSTLVAWVYWECGRDCVV*LGFPFQ
Trigger: CTGAAATGGGAAGCCCAGCAATACCACGCAGTCCCT...CCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CAA 90 bp CCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGGGTTCACGTCCACTCTaGTGGCCTGGGTATATTGGG +
Preference number: 5 (lower is better)
Translates to: PCGSRPLLWPGYIGNAGMGSRPL*WPGYIG
Trigger: CCCAATATACCCAGGCCACAAGAGTGGACGTGAACC...CATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp TGGGAGATGGGCTCCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCACACAGTGAAGGCTTaGAGAGGCTTCGTTAACGGT +
Preference number: 5 (lower is better)
Translates to: WEMGSSDRTPCGSRPLLWHTVKA*RGFVNG
Trigger: ACCGTTAACGAAGCCTCTCAAAGCCTTCACTGTGTG...CCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGGAGCCCATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
CDS-3UTR CAA 90 bp ATCTGGTTCCAGACAAGGCTGATTCAGAGACTCCACGTGGTCAAGGCTCTGTTGGGCCACAGCTGGGGTTaGGTGAACACTTCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: IWFQTRLIQRLHVVKALLGHSWG*VNTSPC
Trigger: GCAAGGCGAAGTGTTCACCAAACCCCAGCTGTGGCC...CAACAGAGCCTTGACCACGTGGAGTCTCTGAATCAGCCTTGTCTGGAACCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CAA 90 bp CCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGGGTGAACACTTCGCCTaGCACTTCATACTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: PCGSRPLLWPGYIGNAGMGEHFA*HFILQC
Trigger: GCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCACC...CATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp CCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGGATGGTGGTCAAGGCTCTGTaGTTTGTCAATCCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PCGSRPLLWPGYIGNAGMVVKAL*FVNPLA
Trigger: AGCCAAGGGATTGACAAACAACAGAGCCTTGACCAC...CATCCCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CAA 90 bp CCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGTTGTTTGTCAATCCCTaGGCTCCTCCACTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: PLTGHPVVHVHSCGLGILLFVNP*APPLPV
Trigger: AACTGGAAGTGGAGGAGCCAAGGGATTGACAAACAA...CAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CAA 90 bp GACCTGGGCAGTCCAGGTGTAGATCTGGTTCCAGACAAGGCTGATTCAGAGACTGTGGTCAAGGCTCTGTaGTTTGTCAATCCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: DLGSPGVDLVPDKADSETVVKAL*FVNPLA
Trigger: AGCCAAGGGATTGACAAACAACAGAGCCTTGACCAC...AGTCTCTGAATCAGCCTTGTCTGGAACCAGATCTACACCTGGACTGCCCAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS CCA 90 bp AAGCCTTCCTCGACATGTCTGTCTGGCCAAAAGCATGAGAGAGGCTaGTCAAGACCAAGAAACACAACAGCTTCTCCATGGTCACGTCCT +
Preference number: 5 (lower is better)
Translates to: KPSSTCLSGQKHERG*SRPRNTTASPWSRP
Trigger: AGGACGTGACCATGGAGAAGCTGTTGTGTTTCTTGGTCTTGACCAGCCTCTCTCATGCTTTTGGCCAGACAGACATGTCGAGGAAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368111.5
ENST00000368112.5
CDS-3UTR CAA 90 bp GACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGCGGGCCTGAATTCACTCCTTaGGAAAAGATGTATTCGGCT +
Preference number: 5 (lower is better)
Translates to: DTLWFTSTLVAWVYWECGPEFTP*EKMYSA
Trigger: AGCCGAATACATCTTTTCCAAAGGAGTGAATTCAGG...CCCGCATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp CATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTTCAGGACCCACAGCTGGGCACACAGTGAAGGCTTaGAGAGGCTTCGTTAACGGT +
Preference number: 5 (lower is better)
Translates to: HNSILGKTVVGPSGPTAGHTVKA*RGFVNG
Trigger: ACCGTTAACGAAGCCTCTCAAAGCCTTCACTGTGTG...CCCAGCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCAAGGATTGAGTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368111.5
CDS-3UTR CAA 90 bp CATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTTCAGGACCCACAGCTGGGGGTGAACACTTCGCCTaGCACTTCATACTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: HNSILGKTVVGPSGPTAGGEHFA*HFILQC
Trigger: GCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCACC...CCCAGCTGTGGGTCCTGAAGGACCAACTACAGTCTTCCCAAGGATTGAGTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368111.5
CDS-3UTR CAA 90 bp TGTCAATCCCTTGGCTCCTCCACTTCCAGTTTGGCTTCTGTCCTCACAGTCTCTGGTGAACACTTCGCCTaGCACTTCATACTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: CQSLGSSTSSLASVLTVSGEHFA*HFILQC
Trigger: GCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCACC...AGAGACTGTGAGGACAGAAGCCAAACTGGAAGTGGAGGAGCCAAGGGATTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CAA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTGGCCACAGCTGGGGTTaGGTGAACACTTCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGGHSWG*VNTSPC
Trigger: GCAAGGCGAAGTGTTCACCAAACCCCAGCTGTGGCC...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368111.5
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp ACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGGGAATGTTGTTTGTCAATCCCTaGGCTCCTCCACTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: TGHPVVHVHSCGLGILGMLFVNP*APPLPV
Trigger: AACTGGAAGTGGAGGAGCCAAGGGATTGACAAACAA...CATTCCCAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CAA 90 bp CCTCTGACAGGACACCCTGTGGTTCACGTCCACTCTTGTGGCCTGGGTATATTGCCTGAATTCACTCCTTaGGAAAAGATGTATTCGGCT +
Preference number: 5 (lower is better)
Translates to: PLTGHPVVHVHSCGLGILPEFTP*EKMYSA
Trigger: AGCCGAATACATCTTTTCCAAAGGAGTGAATTCAGG...CAATATACCCAGGCCACAAGAGTGGACGTGAACCACAGGGTGTCCTGTCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp GGGAATGCGGGGATGAAGAAAGAATTCACAGCCCCACAAGGTTCGTGTGGAAAAGGTGAACACTTCGCCTaGCACTTCATACTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: GNAGMKKEFTAPQGSCGKGEHFA*HFILQC
Trigger: GCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCACC...TTTTCCACACGAACCTTGTGGGGCTGTGAATTCTTTCTTCATCCCCGCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp AGTCTCTCTCCATGTGGCAAACAAGATGGCTACTGGTGGTCCCAGGTTCACGTCCCTGAATTCACTCCTTaGGAAAAGATGTATTCGGCT +
Preference number: 5 (lower is better)
Translates to: SLSPCGKQDGYWWSQVHVPEFTP*EKMYSA
Trigger: AGCCGAATACATCTTTTCCAAAGGAGTGAATTCAGG...GACGTGAACCTGGGACCACCAGTAGCCATCTTGTTTGCCACATGGAGAGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp CGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCCGAGAATCTCATTGTCTaGTCTCTTGGTGGCATACGA +
Preference number: 5 (lower is better)
Translates to: RPLSLEIQQQEDVSLPKSENLIV*SLGGIR
Trigger: TCGTATGCCACCAAGAGACAAGACAATGAGATTCTC...GGACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CAA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTGGTTCACGTCCACTCTaGTGGCCTGGGTATATTGGG +
Preference number: 5 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGGSRPL*WPGYIG
Trigger: CCCAATATACCCAGGCCACAAGAGTGGACGTGAACC...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255030.9
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp AGGTTCACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCGAGAATCTCATTGTCTaGTTGCCAGTGATACAAGGG +
Preference number: 5 (lower is better)
Translates to: RFTSSQLGNPAARRCLTPENLIV*LPVIQG
Trigger: CCCTTGTATCACTGGCAACAAGACAATGAGATTCTC...GGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGTGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437342.1
CDS TCA 90 bp ACCAAGAAACACAACAGCTTCTCCATGGTCACGTCCTGCTGCCAGTaGTACAAGGGCCTGAATTCACTCCTTTGGAAAAGATGTATTCGG +
Preference number: 5 (lower is better)
Translates to: TKKHNSFSMVTSCCQ*YKGLNSLLWKRCIR
Trigger: CCGAATACATCTTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACTGGCAGCAGGACGTGACCATGGAGAAGCTGTTGTGTTTCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368111.5
ENST00000368112.5
CDS-3UTR CAA 90 bp CCCAGCATAGTTAACGAGCTCCCAGACCAGACACTTTACCTCCATTCTCAGGCGAATATGAGAATCTCATaGTCTTGTCTCTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PSIVNELPDQTLYLHSQANMRIS*SCLLVA
Trigger: TGCCACCAAGAGACAAGACAATGAGATTCTCATATT...CGCCTGAGAATGGAGGTAAAGTGTCTGGTCTGGGAGCTCGTTAACTATGCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS-3UTR CAA 90 bp ACGTCCTCTCAGCTTGGAAATCCAGCAGCAAGAAGATGTCTCACTCCCAAAGTCAATCTCATTGTCTTGTaGCCAGTGATACAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: TSSQLGNPAARRCLTPKVNLIVL*PVIQGP
Trigger: AGGCCCTTGTATCACTGGCAACAAGACAATGAGATT...GACTTTGGGAGTGAGACATCTTCTTGCTGCTGGATTTCCAAGCTGAGAGGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437342.1
CDS-3UTR CAA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTGGTGAACACTTCGCCTaGCACTTCATACTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGGEHFA*HFILQC
Trigger: GCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCACC...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368111.5
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp CTTTATTGGCTTATAGACCTGGGCAGTCCAGGTGTAGATCTGGTTCCAGACAAGCCTGAATTCACTCCTTaGGAAAAGATGTATTCGGCT +
Preference number: 5 (lower is better)
Translates to: LYWLIDLGSPGVDLVPDKPEFTP*EKMYSA
Trigger: AGCCGAATACATCTTTTCCAAAGGAGTGAATTCAGG...CTTGTCTGGAACCAGATCTACACCTGGACTGCCCAGGTCTATAAGCCAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS-3UTR CAA 90 bp AGATGTCTCACTCCCAAAGTCCATAACTCAATCCTTGGGAAGACTGTAGTTGGTCCTGAATTCACTCCTTaGGAAAAGATGTATTCGGCT +
Preference number: 5 (lower is better)
Translates to: RCLTPKVHNSILGKTVVGPEFTP*EKMYSA
Trigger: AGCCGAATACATCTTTTCCAAAGGAGTGAATTCAGG...ACCAACTACAGTCTTCCCAAGGATTGAGTTATGGACTTTGGGAGTGAGACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368111.5
ENST00000368112.5
ENST00000437342.1
CDS-3UTR CAA 90 bp AAACAAAACACCTCAAATTCTGATTCTTTTGGACCGTTTCCCAGCATAGTTAACCACACAGTGAAGGCTTaGAGAGGCTTCGTTAACGGT +
Preference number: 5 (lower is better)
Translates to: KQNTSNSDSFGPFPSIVNHTVKA*RGFVNG
Trigger: ACCGTTAACGAAGCCTCTCAAAGCCTTCACTGTGTG...GTTAACTATGCTGGGAAACGGTCCAAAAGAATCAGAATTTGAGGTGTTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS GCA 72 bp CAGGGCCACAGCTGGGGTTTGGTGAACACTTCGCCTTaGACTTCATACTTCAGTGCCCGCCAGTTCAGGACA +
Preference number: 6 (lower is better)
Translates to: QGHSWGLVNTSP*TSYFSARQFRT
Trigger: TGTCCTGAACTGGCGGGCACTGAAGTATGAAGTGCAAGGCGAAGTGTTCACCAAACCCCAGCTGTGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368111.5
ENST00000368112.5
ENST00000437342.1
ENST00000473196.1
CDS CAA 90 bp GGTCACGTCCTGCTGCCAGTGATACAAGGGCCTGAATTCACTCCTTaGGAAAAGATGTATTCGGCTGAAAGTTCAGGGGCTAGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: GHVLLPVIQGPEFTP*EKMYSAESSGARSP
Trigger: AGGACTTCTAGCCCCTGAACTTTCAGCCGAATACATCTTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACTGGCAGCAGGACGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368111.5
ENST00000368112.5
CDS TCA 72 bp CACAACAGCTTCTCCATGGTCACGTCCTGCTGCCAGTaGTACAAGGGCCTGAATTCACTCCTTTGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: HNSFSMVTSCCQ*YKGLNSLLWKR
Trigger: TCTTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACTGGCAGCAGGACGTGACCATGGAGAAGCTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368111.5
ENST00000368112.5
CDS CAA 72 bp CTGCTGCCAGTGATACAAGGGCCTGAATTCACTCCTTaGGAAAAGATGTATTCGGCTGAAAGTTCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: LLPVIQGPEFTP*EKMYSAESSGA
Trigger: AGCCCCTGAACTTTCAGCCGAATACATCTTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACTGGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255030.9
ENST00000368110.1
ENST00000368111.5
ENST00000368112.5
CDS CAA 90 bp CTCATTGTCTTGTTGCCAGTGATACAAGGGCCTGAATTCACTCCTTaGGAAAAGATGTATTCGGCTGAAAGTTCAGGGGCTAGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: LIVLLPVIQGPEFTP*EKMYSAESSGARSP
Trigger: AGGACTTCTAGCCCCTGAACTTTCAGCCGAATACATCTTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACTGGCAACAAGACAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437342.1
CDS CAA 72 bp TTGTTGCCAGTGATACAAGGGCCTGAATTCACTCCTTaGGAAAAGATGTATTCGGCTGAAAGTTCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: LLPVIQGPEFTP*EKMYSAESSGA
Trigger: AGCCCCTGAACTTTCAGCCGAATACATCTTTTCCAAAGGAGTGAATTCAGGCCCTTGTATCACTGGCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437342.1
CDS TCA 72 bp ACTCCCAGCTTGTACAAATGTGTACTGGAGCTACTGTaGCTTCAGGAACCTCGAATAATATTTCAGACCCAC +
Preference number: 6 (lower is better)
Translates to: TPSLYKCVLELL*LQEPRIIFQTH
Trigger: GTGGGTCTGAAATATTATTCGAGGTTCCTGAAGTCACAGTAGCTCCAGTACACATTTGTACAAGCTGGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255030.9
ENST00000437342.1
CDS CAA 90 bp CCTATATCCTTAGACCAAAATATGAGAATCTCATTGTCTTGTCTCTaGGTGGCATACGAGAAAATACTGTACCCACGGGTCGAGGACAGT +
Preference number: 6 (lower is better)
Translates to: PISLDQNMRISLSCL*VAYEKILYPRVEDS
Trigger: ACTGTCCTCGACCCGTGGGTACAGTATTTTCTCGTATGCCACCAAGAGACAAGACAATGAGATTCTCATATTTTGGTCTAAGGATATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS CAA 90 bp ACTGTATCCTATATCCTTAGACCAAAATATGAGAATCTCATTGTCTaGTCTCTTGGTGGCATACGAGAAAATACTGTACCCACGGGTCGA +
Preference number: 6 (lower is better)
Translates to: TVSYILRPKYENLIV*SLGGIRENTVPTGR
Trigger: TCGACCCGTGGGTACAGTATTTTCTCGTATGCCACCAAGAGACAAGACAATGAGATTCTCATATTTTGGTCTAAGGATATAGGATACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255030.9
CDS CAA 72 bp TATATCCTTAGACCAAAATATGAGAATCTCATTGTCTaGTCTCTTGGTGGCATACGAGAAAATACTGTACCC +
Preference number: 6 (lower is better)
Translates to: YILRPKYENLIV*SLGGIRENTVP
Trigger: GGGTACAGTATTTTCTCGTATGCCACCAAGAGACAAGACAATGAGATTCTCATATTTTGGTCTAAGGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255030.9