RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CROT (Homo sapiens)

Ensembl gene IDs: ENSG00000005469

Ensembl transcript IDs: ENST00000331536.8, ENST00000412227.6, ENST00000419147.6, ENST00000442291.1, ENST00000469785.1, ENST00000479014.1, ENST00000488850.1

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGAGGACCTTACCCTGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLRTLPC*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAACAGGGTAAGGTCCT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
3UTR-3UTR TCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGACCCGGCTAAGTTTTTaGTCTTGTAGAGACAGGACC +
Preference number: 2 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLTRLSF*SCRDRT
Trigger: GGTCCTGTCTCTACAAGATCAAAAACTTAGCCGGGT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
3UTR-3UTR TCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTAGATGGACTCTACATTaGTGTCCAGAGAGAGGATTT +
Preference number: 2 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPARWTLH*CPERGF
Trigger: AAATCCTCTCTCTGGACATCAATGTAGAGTCCATCT...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
3UTR-3UTR TCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGAGATGGACTCTACATTaGTGTCCAGAGAGAGGATTT +
Preference number: 2 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRRWTLH*CPERGF
Trigger: AAATCCTCTCTCTGGACATCAATGTAGAGTCCATCT...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
3UTR-3UTR GCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGTGTCATAATTTGCATTaGTGCTGCATCAGAGGAGCT +
Preference number: 2 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRCHNLH*CCIRGA
Trigger: AGCTCCTCTGATGCAGCAGCAATGCAAATTATGACA...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
3UTR-3UTR GCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACTGTCATAATTTGCATTaGTGCTGCATCAGAGGAGCT +
Preference number: 2 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYCHNLH*CCIRGA
Trigger: AGCTCCTCTGATGCAGCAGCAATGCAAATTATGACA...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
3UTR CCA 72 bp CTCAACCGATCCTCCTGTCTCAGCCTTCAAGTAGCTTaGACTACAGGCACACATGCACCACCATACCCGGCT +
Preference number: 3 (lower is better)
Translates to: LNRSSCLSLQVA*TTGTHAPPYPA
Trigger: AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAGACAGGAGGATCGGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
3UTR-3UTR CAA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGCAGCCTTCAAGTAGCTaGGACTACAGGCACACATGC +
Preference number: 3 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLQPSSS*DYRHTC
Trigger: GCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTG...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
3UTR-3UTR CAA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTTCAAACATAACAGGCTaGTATCCCTGTGGTGAACAT +
Preference number: 3 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPASNITG*YPCGEH
Trigger: ATGTTCACCACAGGGATACAAGCCTGTTATGTTTGA...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
3UTR-3UTR CAA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGTTTGTAGATTTGGATaGTTGAGGCTTAAATACTGC +
Preference number: 3 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYVCRFG*LRLKYC
Trigger: GCAGTATTTAAGCCTCAACAATCCAAATCTACAAAC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTGCCGCAGCCTCAGCCTaGAGCAGCACCGGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAAAASA*SSTGSL
Trigger: GAGCGAGCCGGTGCTGCTGCAGGCTGAGGCTGCGGC...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGCCGCAGCCTCAGCCTaGAGCAGCACCGGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLAAASA*SSTGSL
Trigger: GAGCGAGCCGGTGCTGCTGCAGGCTGAGGCTGCGGC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGGATCCTGCATGGACTaGCACCACCTCACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLGSCMD*HHLTAS
Trigger: TGAAGCAGTGAGGTGGTGCCAGTCCATGCAGGATCC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGAATTCCTTCCCGCGTaGGATCCAAGAACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLEFLPA*DPRTLS
Trigger: AGAGAGGGTTCTTGGATCTCACGCGGGAAGGAATTC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419147.6
CDS-3UTR GCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTTTGACAGAAGGATCCTaGATGGACTGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPALTEGS*MDWHHL
Trigger: GAGGTGGTGCCAGTCCATGCAGGATCCTTCTGTCAA...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTAGGACCTTACCCTGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPARTLPC*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAACAGGGTAAGGTCCT...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTTTGTCTGAGAAGCTCTaGCGGGGTGACCAAACATCC +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPALSEKL*RGDQTS
Trigger: GGATGTTTGGTCACCCCGCCAGAGCTTCTCAGACAA...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGACAGGATTTCCAGGCTaGACAGGCCACAACAAACCT +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLTGFPG*TGHNKP
Trigger: AGGTTTGTTGTGGCCTGTTCAGCCTGGAAATCCTGT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTGCCGCAGCCTCAGCCTaGAGCAGCACCGGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: QICILTSSRIHPLKTPKVAAASA*SSTGSL
Trigger: GAGCGAGCCGGTGCTGCTGCAGGCTGAGGCTGCGGC...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR GCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTACCAAGAAGATGAACTaGTTGAGACTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPATKKMN*LRLPGA
Trigger: GGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGT...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGACCAAGAAGATGAACTaGTTGAGACTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLTKKMN*LRLPGA
Trigger: GGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGCACTACAATGTGGTTTaGGGAACGCCCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLHYNVV*GTPFTL
Trigger: GAGAGTGAAGGGCGTTCCCCAAACCACATTGTAGTG...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTCACAGCACTACAATGTaGTTTGGGGAACGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAHSTTM*FGERPS
Trigger: TGAAGGGCGTTCCCCAAACCACATTGTAGTGCTGTG...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTACCCCAGCGTACTGTTaGATCTCCAATAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPATPAYC*ISNKDG
Trigger: GCCATCCTTATTGGAGATCCAACAGTACGCTGGGGT...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGACCCCAGCGTACTGTTaGATCTCCAATAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLTPAYC*ISNKDG
Trigger: GCCATCCTTATTGGAGATCCAACAGTACGCTGGGGT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTGCCTCCCTGAGATACTaGGCTTTAGCTTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAASLRY*ALAWLM
Trigger: CATCAACCAAGCTAAAGCCCAGTATCTCAGGGAGGC...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTTGCTTCAACTGTGCATaGTCGCATAGTCTCTGTACG +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPACFNCA*SHSLCT
Trigger: CGTACAGAGACTATGCGATCATGCACAGTTGAAGCA...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTACCCGGCTAAGTTTTTaGTCTTGTAGAGACAGGACC +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPATRLSF*SCRDRT
Trigger: GGTCCTGTCTCTACAAGATCAAAAACTTAGCCGGGT...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGAGACTGCCAGGAGCCTaGTGCAACAATTGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLRLPGA*CNNCFE
Trigger: CTCAAAACAATTGTTGCAGCAGGCTCCTGGCAGTCT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGTGTTCAAAATGAGCTaGAGGACCCGCAAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLVFKMS*RTRKVD
Trigger: GTCAACTTTGCGGGTCCTGCAGCTCATTTTGAACAC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTGTGTTCAAAATGAGCTaGAGGACCCGCAAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAVFKMS*RTRKVD
Trigger: GTCAACTTTGCGGGTCCTGCAGCTCATTTTGAACAC...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTCTCTGGTGTTACATGTaGACTGCTATCCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPALWCYM*TAILHG
Trigger: TCCATGGAGGATAGCAGTCCACATGTAACACCAGAG...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGCTGCAACAATTGTTTTaGGATCACAGGGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLLQQLF*DHRELD
Trigger: GTCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAG...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGCAGGACCCGCAAAGTTaGCATTCAATTGTGATGGTA +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLQDPQS*HSIVMV
Trigger: TACCATCACAATTGAATGTCAACTTTGCGGGTCCTG...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTGCACAAAAAGTCAGCTaGACTAGCTTTTCCGCATCA +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAAQKVS*TSFSAS
Trigger: TGATGCGGAAAAGCTAGTTCAGCTGACTTTTTGTGC...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTGCTTGTAACATCTTTTaGTGCCGCTCACGAAGATTG +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAACNIF*CRSRRL
Trigger: CAATCTTCGTGAGCGGCAGCAAAAGATGTTACAAGC...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGAGCTCTTCTGGAAGTaGTATATCTCGTACCTTCTC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLELFWK*YISYLL
Trigger: GAGAAGGTACGAGATATACCACTTCCAGAAGAGCTC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGATAAACGTATCCGGGTaGAGCATCTTGTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLINVSG*SILFLV
Trigger: AACCAAGAACAAGATGCTTCACCCGGATACGTTTAT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTATAAACGTATCCGGGTaGAGCATCTTGTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAINVSG*SILFLV
Trigger: AACCAAGAACAAGATGCTTCACCCGGATACGTTTAT...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGATAGGCCAGCTGAAGTaGAAGCTGAATAAACGTATC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLIGQLK*KLNKRI
Trigger: GATACGTTTATTCAGCTTGCACTTCAGCTGGCCTAT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGTGTAACATCTTTTGCTaGCGCTCACGAAGATTGACA +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLCNIFC*RSRRLT
Trigger: TGTCAATCTTCGTGAGCGGCAGCAAAAGATGTTACA...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGTGTCATAATTTGCATTaGTGCTGCATCAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLCHNLH*CCIRGA
Trigger: AGCTCCTCTGATGCAGCAGCAATGCAAATTATGACA...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCGGCTCGCTCCCCCTTaGGCCTCAAAGGTGCGGGAA +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYRLAPP*ASKVRE
Trigger: TTCCCGCACCTTTGAGGCCCAAGGGGGAGCGAGCCG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331536.8
CDS-3UTR CCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGCTCAGAATAATCCTCTaGTGTTACATGTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLLRIIL*CYMWTA
Trigger: AGCAGTCCACATGTAACACCAGAGGATTATTCTGAG...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGAAGAGACCTAAAAGGTaGCGATCAAATCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLKRPKR*RSNPFP
Trigger: TGGAAAAGGATTTGATCGTCACCTTTTAGGTCTCTT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGCTTCCTCTTTTGCTATaGGTAAGAGACCTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLLPLLL*VRDLKG
Trigger: ACCTTTTAGGTCTCTTACTCATAGCAAAAGAGGAAG...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGGTAGCATGTTCTGGTaGCTGATTCAAGGTATTTTT +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLGSMFW*LIQGIF
Trigger: AAAAATACCTTGAATCAGTCACCAGAACATGCTACC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419147.6
CDS-3UTR GCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTGTGTTACATGTGGACTaGTATCCTCCATGGAATATA +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAVLHVD*YPPWNI
Trigger: TATATTCCATGGAGGATAGCAGTCCACATGTAACAC...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGCCATCAGGTTCACTATaGCACTTCTTGTGGATATAT +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLPSGSL*HFLWIY
Trigger: ATATATCCACAAGAAGTGCCATAGTGAACCTGATGG...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGCAAAGCCAAGTTCTCTaGATCAAGACCAATCAGATA +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLQSQVL*IKTNQI
Trigger: TATCTGATTGGTCTTGATCCAGAGAACTTGGCTTTG...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTGACTGCTATCCTCCATaGAATATACCAGTAAACTAC +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPADCYPP*NIPVNY
Trigger: GTAGTTTACTGGTATATTCCATGGAGGATAGCAGTC...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGAAAATGAGCTCTTCTaGAAGTGGTATATCTCGTAC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLENELF*KWYISY
Trigger: GTACGAGATATACCACTTCCAGAAGAGCTCATTTTC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGGGATCCTGCATGGACTaGCACCACCTCACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRGSCMD*HHLTAS
Trigger: TGAAGCAGTGAGGTGGTGCCAGTCCATGCAGGATCC...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGTCAAGCAATTTCTGGTaGAATTTTTCTCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLSSNFW*NFSPIP
Trigger: TGGGATTGGAGAAAAATTGCACCAGAAATTGCTTGA...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGTTCACCATAATCATTaGATCAAAAGGAGCATGATC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLVHHNH*IKRSMI
Trigger: GATCATGCTCCTTTTGATGCAATGATTATGGTGAAC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTGAAGCATCTTGTTCTTaGTTAGCTTTTTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAEASCS*LAFCQK
Trigger: CTTTTGGCAAAAAGCTAACCAAGAACAAGATGCTTC...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGTCCAATAAGGATGGCTaGAATAATCTCAGAATAATC +
Preference number: 4 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLSNKDG*NNLRII
Trigger: GATTATTCTGAGATTATTGCAGCCATCCTTATTGGA...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCACATCACAGCTCACTaGAGCCACAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYHITAH*SHNLLG
Trigger: GCCCAGGAGGTTGTGGCTGCAGTGAGCTGTGATGTG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGCACTACAATGTGGTTTaGGGAACGCCCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRHYNVV*GTPFTL
Trigger: GAGAGTGAAGGGCGTTCCCCAAACCACATTGTAGTG...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGCACAGCACTACAATGTaGTTTGGGGAACGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRHSTTM*FGERPS
Trigger: TGAAGGGCGTTCCCCAAACCACATTGTAGTGCTGTG...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGATCTCGTACCTTCTCTaGACCCTTCCATCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRISYLL*TLPSSF
Trigger: GAAGGAAGATGGAAGGGTTCAGAGAAGGTACGAGAT...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGACCCGGCTAAGTTTTTaGTCTTGTAGAGACAGGACC +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRTRLSF*SCRDRT
Trigger: GGTCCTGTCTCTACAAGATCAAAAACTTAGCCGGGT...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGCTGCCAGGAGCCTGCTaGAACAATTGTTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRLPGAC*NNCFEI
Trigger: GATCTCAAAACAATTGTTGCAGCAGGCTCCTGGCAG...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGAGACTGCCAGGAGCCTaGTGCAACAATTGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRRLPGA*CNNCFE
Trigger: CTCAAAACAATTGTTGCAGCAGGCTCCTGGCAGTCT...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCAGAAGGATCCTGCATaGACTGGCACCACCTCACTG +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYQKDPA*TGTTSL
Trigger: CAGTGAGGTGGTGCCAGTCCATGCAGGATCCTTCTG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGAACCATTGTGTACCATaGGAACTACCACTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRNHCVP*ELPLPG
Trigger: TCCAGGGAGTGGTAGTTCCCATGGTACACAATGGTT...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGAAGCTCTGGCGGGGTaGCCAAACATCCTTCATGTA +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYEALAG*PNILHV
Trigger: TACATGAAGGATGTTTGGTCACCCCGCCAGAGCTTC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGGCCAACCAGACTTGTTaGGAGAACAAAATTTCCACC +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRANQTC*ENKIST
Trigger: GGTGGAAATTTTGTTCTCTCAACAAGTCTGGTTGGC...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp TTATCCCAGCAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTACCAAGAAGATGAACTaGTTGAGACTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LSQQICILTSSRIHPLKTTKKMN*LRLPGA
Trigger: GGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGT...AGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTGCTGGGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR GCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACTTGACAGAAGGATCCTaGATGGACTGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYLTEGS*MDWHHL
Trigger: GAGGTGGTGCCAGTCCATGCAGGATCCTTCTGTCAA...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCTTGACAGAAGGATCCTaGATGGACTGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLLTEGS*MDWHHL
Trigger: GAGGTGGTGCCAGTCCATGCAGGATCCTTCTGTCAA...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTGAGATCACAGGGAACTaGACTAAGTCGGTGACTGTC +
Preference number: 4 (lower is better)
Translates to: QICILTSSRIHPLKTPKVEITGN*TKSVTV
Trigger: GACAGTCACCGACTTAGTCCAGTTCCCTGTGATCTC...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR CCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGTTGAGTCCCTTCCTTTaGAGGCCAGTAGTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRLSPFL*RPVVFK
Trigger: TTTGAACACTACTGGCCTCCAAAGGAAGGGACTCAA...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGGAGCTCTTCTGGAAGTaGTATATCTCGTACCTTCTC +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRELFWK*YISYLL
Trigger: GAGAAGGTACGAGATATACCACTTCCAGAAGAGCTC...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACACAGGATTTCCAGGCTaGACAGGCCACAACAAACCT +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYTGFPG*TGHNKP
Trigger: AGGTTTGTTGTGGCCTGTTCAGCCTGGAAATCCTGT...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp TTATCCCAGCAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTAGACTGCCAGGAGCCTaGTGCAACAATTGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LSQQICILTSSRIHPLKTRLPGA*CNNCFE
Trigger: CTCAAAACAATTGTTGCAGCAGGCTCCTGGCAGTCT...AGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTGCTGGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR GCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCACCAAGAAGATGAACTaGTTGAGACTGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLTKKMN*LRLPGA
Trigger: GGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGT...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR GCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGTGTAACATCTTTTGCTaGCGCTCACGAAGATTGACA +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRCNIFC*RSRRLT
Trigger: TGTCAATCTTCGTGAGCGGCAGCAAAAGATGTTACA...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGAGATCACAGGGAACTaGACTAAGTCGGTGACTGTC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYEITGN*TKSVTV
Trigger: GACAGTCACCGACTTAGTCCAGTTCCCTGTGATCTC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCACCCCAGCGTACTGTTaGATCTCCAATAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLTPAYC*ISNKDG
Trigger: GCCATCCTTATTGGAGATCCAACAGTACGCTGGGGT...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGCCTCCCTGAGATACTaGGCTTTAGCTTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYASLRY*ALAWLM
Trigger: CATCAACCAAGCTAAAGCCCAGTATCTCAGGGAGGC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAGGATCCTGCATGGACTaGCACCACCTCACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTGSCMD*HHLTAS
Trigger: TGAAGCAGTGAGGTGGTGCCAGTCCATGCAGGATCC...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACACAGAAGGATCCTGCATaGACTGGCACCACCTCACTG +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTQKDPA*TGTTSL
Trigger: CAGTGAGGTGGTGCCAGTCCATGCAGGATCCTTCTG...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCGAGATCACAGGGAACTaGACTAAGTCGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLEITGN*TKSVTV
Trigger: CACAGTCACCGACTTAGTCCAGTTCCCTGTGATCTC...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTCTGCAACAATTGTTTTaGGATCACAGGGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: QICILTSSRIHPLKTPKVLQQLF*DHRELD
Trigger: GTCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAG...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR TCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGAGAGAATCCTGGTACTaGAATGTTCGTTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRRESWY*NVRSSV
Trigger: AACTGAAGAACGAACATTTCAGTACCAGGATTCTCT...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGGTTGACATTCAATTGTaGTGGTATACGAACATCCAG +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRVDIQL*WYTNIQ
Trigger: CTGGATGTTCGTATACCATCACAATTGAATGTCAAC...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAGAAGCTCTGGCGGGGTaGCCAAACATCCTTCATGTA +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTEALAG*PNILHV
Trigger: TACATGAAGGATGTTTGGTCACCCCGCCAGAGCTTC...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACATCTCGTACCTTCTCTaGACCCTTCCATCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYISYLL*TLPSSF
Trigger: GAAGGAAGATGGAAGGGTTCAGAGAAGGTACGAGAT...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCATCTCGTACCTTCTCTaGACCCTTCCATCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLISYLL*TLPSSF
Trigger: GAAGGAAGATGGAAGGGTTCAGAGAAGGTACGAGAT...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACTGCTTCAACTGTGCATaGTCGCATAGTCTCTGTACG +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYCFNCA*SHSLCT
Trigger: CGTACAGAGACTATGCGATCATGCACAGTTGAAGCA...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGCAAATGGTTTCACTTaGATTCCTTCCCGCGTGAGA +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYANGFT*IPSRVR
Trigger: TCTCACGCGGGAAGGAATTCAAGTGAAACCATTTGC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419147.6
CDS-3UTR GCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCAGACTGCCAGGAGCCTaGTGCAACAATTGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLRLPGA*CNNCFE
Trigger: CTCAAAACAATTGTTGCAGCAGGCTCCTGGCAGTCT...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACATTGTCTGAGAAGCTCTaGCGGGGTGACCAAACATCC +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTLSEKL*RGDQTS
Trigger: GGATGTTTGGTCACCCCGCCAGAGCTTCTCAGACAA...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGCTATGGCACTTCTTGTaGATATATGTCAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRLWHFL*IYVSCL
Trigger: CAGACAACTGACATATATCCACAAGAAGTGCCATAG...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGCCATCAGGTTCACTATaGCACTTCTTGTGGATATAT +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRPSGSL*HFLWIY
Trigger: ATATATCCACAAGAAGTGCCATAGTGAACCTGATGG...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCTCTGGTGTTACATGTaGACTGCTATCCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYLWCYM*TAILHG
Trigger: TCCATGGAGGATAGCAGTCCACATGTAACACCAGAG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCCTCTGGTGTTACATGTaGACTGCTATCCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLLWCYM*TAILHG
Trigger: TCCATGGAGGATAGCAGTCCACATGTAACACCAGAG...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGTCCGTAAAGAGTTCTaGAACAGGAAGACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYVRKEF*NRKTFL
Trigger: GAGGAAGGTCTTCCTGTTCCAGAACTCTTTACGGAC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCGTCCGTAAAGAGTTCTaGAACAGGAAGACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLVRKEF*NRKTFL
Trigger: GAGGAAGGTCTTCCTGTTCCAGAACTCTTTACGGAC...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACAACCATTGTGTACCATaGGAACTACCACTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYNHCVP*ELPLPG
Trigger: TCCAGGGAGTGGTAGTTCCCATGGTACACAATGGTT...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCAACCATTGTGTACCATaGGAACTACCACTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLNHCVP*ELPLPG
Trigger: TCCAGGGAGTGGTAGTTCCCATGGTACACAATGGTT...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGCCAACCAGACTTGTTaGGAGAACAAAATTTCCACC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYANQTC*ENKIST
Trigger: GGTGGAAATTTTGTTCTCTCAACAAGTCTGGTTGGC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGCAAACCTGTCATCTCTaGTATGGTAGAAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRQTCHL*YGRKIH
Trigger: ATGGATTTTTCTACCATATCAGAGATGACAGGTTTG...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGCACAAAAAGTCAGCTaGACTAGCTTTTCCGCATCA +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYAQKVS*TSFSAS
Trigger: TGATGCGGAAAAGCTAGTTCAGCTGACTTTTTGTGC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp ATTCCCTTTCTCCATTGTACTACGAAAATATTTCTATGCCACCTATGTGACATGCCCGAATCCACCCACTaGAAACTCCCAAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: IPFLHCTTKIFLCHLCDMPESTH*KLPKLS
Trigger: ACTTAACTTTGGGAGTTTTCAGTGGGTGGATTCGGG...CATGTCACATAGGTGGCATAGAAATATTTTCGTAGTACAATGGAGAAAGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR GCA 90 bp ATTCCCTTTCTCCATTGTACTACGAAAATATTTCTATGCCACCTATGTGACATGCTGCCAGGAGCCTGCTaGAACAATTGTTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: IPFLHCTTKIFLCHLCDMLPGAC*NNCFEI
Trigger: GATCTCAAAACAATTGTTGCAGCAGGCTCCTGGCAG...CATGTCACATAGGTGGCATAGAAATATTTTCGTAGTACAATGGAGAAAGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACTTGAGTCCCTTCCTTTaGAGGCCAGTAGTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYLSPFL*RPVVFK
Trigger: TTTGAACACTACTGGCCTCCAAAGGAAGGGACTCAA...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACACACTACAATGTGGTTTaGGGAACGCCCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTHYNVV*GTPFTL
Trigger: GAGAGTGAAGGGCGTTCCCCAAACCACATTGTAGTG...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACACACAGCACTACAATGTaGTTTGGGGAACGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTHSTTM*FGERPS
Trigger: TGAAGGGCGTTCCCCAAACCACATTGTAGTGCTGTG...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCGAGCTCTTCTGGAAGTaGTATATCTCGTACCTTCTC +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLELFWK*YISYLL
Trigger: GAGAAGGTACGAGATATACCACTTCCAGAAGAGCTC...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAGCCTCCCTGAGATACTaGGCTTTAGCTTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTASLRY*ALAWLM
Trigger: CATCAACCAAGCTAAAGCCCAGTATCTCAGGGAGGC...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp TTATCCCAGCAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTTGTTTTCCTTCAGCATaGTCTACAGATTACCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSQQICILTSSRIHPLKTCFPSA*STDYLQ
Trigger: CTGCAGGTAATCTGTAGACCATGCTGAAGGAAAACA...AGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTGCTGGGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR TCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCATAAACGTATCCGGGTaGAGCATCTTGTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLINVSG*SILFLV
Trigger: AACCAAGAACAAGATGCTTCACCCGGATACGTTTAT...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACATGCTTCAACTGTGCATaGTCGCATAGTCTCTGTACG +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTCFNCA*SHSLCT
Trigger: CGTACAGAGACTATGCGATCATGCACAGTTGAAGCA...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTTACAACCTCATCCTCTaGTTCATAGTAGAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: QICILTSSRIHPLKTPKVYNLIL*FIVEKY
Trigger: GTACTTCTCTACTATGAATCAGAGGATGAGGTTGTA...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR TCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCACCTCATTCATTAGATaGCTAGCACCTGTCATCTCT +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLTSFIR*LAPVIS
Trigger: AGAGATGACAGGTGCTAGTCATCTAATGAATGAGGT...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR GCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAGTGTTCAAAATGAGCTaGAGGACCCGCAAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTVFKMS*RTRKVD
Trigger: GTCAACTTTGCGGGTCCTGCAGCTCATTTTGAACAC...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR GCA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGTCCAATAAGGATGGCTaGAATAATCTCAGAATAATC +
Preference number: 4 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRSNKDG*NNLRII
Trigger: GATTATTCTGAGATTATTGCAGCCATCCTTATTGGA...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCTCAGAATAATCCTCTaGTGTTACATGTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYLRIIL*CYMWTA
Trigger: AGCAGTCCACATGTAACACCAGAGGATTATTCTGAG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCCTCAGAATAATCCTCTaGTGTTACATGTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLLRIIL*CYMWTA
Trigger: AGCAGTCCACATGTAACACCAGAGGATTATTCTGAG...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACACTGCAACAATTGTTTTaGGATCACAGGGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTLQQLF*DHRELD
Trigger: GTCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAG...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGTTGACATTCAATTGTaGTGGTATACGAACATCCAG +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYVDIQL*WYTNIQ
Trigger: CTGGATGTTCGTATACCATCACAATTGAATGTCAAC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCGTTGACATTCAATTGTaGTGGTATACGAACATCCAG +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLVDIQL*WYTNIQ
Trigger: CTGGATGTTCGTATACCATCACAATTGAATGTCAAC...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACACAGGACCCGCAAAGTTaGCATTCAATTGTGATGGTA +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTQDPQS*HSIVMV
Trigger: TACCATCACAATTGAATGTCAACTTTGCGGGTCCTG...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACAAGAGACCTAAAAGGTaGCGATCAAATCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYKRPKR*RSNPFP
Trigger: TGGAAAAGGATTTGATCGTCACCTTTTAGGTCTCTT...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCAAGAGACCTAAAAGGTaGCGATCAAATCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLKRPKR*RSNPFP
Trigger: TGGAAAAGGATTTGATCGTCACCTTTTAGGTCTCTT...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCTTCCTCTTTTGCTATaGGTAAGAGACCTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYLPLLL*VRDLKG
Trigger: ACCTTTTAGGTCTCTTACTCATAGCAAAAGAGGAAG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCCTTCCTCTTTTGCTATaGGTAAGAGACCTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLLPLLL*VRDLKG
Trigger: ACCTTTTAGGTCTCTTACTCATAGCAAAAGAGGAAG...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAGCCAACCAGACTTGTTaGGAGAACAAAATTTCCACC +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTANQTC*ENKIST
Trigger: GGTGGAAATTTTGTTCTCTCAACAAGTCTGGTTGGC...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTTCTATGCCACCTATGTaGCATGTCTATTTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: QICILTSSRIHPLKTPKVSMPPM*HVYFSV
Trigger: AACACTAAAATAGACATGTCACATAGGTGGCATAGA...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR TCA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTCTAAGGCAATGCTTTTaGATTATACAACCTCATCCT +
Preference number: 4 (lower is better)
Translates to: QICILTSSRIHPLKTPKVLRQCF*IIQPHP
Trigger: AGGATGAGGTTGTATAATTCAAAAGCATTGCCTTAG...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR GCA 90 bp TTATCCCAGCAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTTCAAGCAATTTCTGGTaGAATTTTTCTCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: LSQQICILTSSRIHPLKTSSNFW*NFSPIP
Trigger: TGGGATTGGAGAAAAATTGCACCAGAAATTGCTTGA...AGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTGCTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR GCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGTGTTACATGTGGACTaGTATCCTCCATGGAATATA +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYVLHVD*YPPWNI
Trigger: TATATTCCATGGAGGATAGCAGTCCACATGTAACAC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAGCTTGTAACATCTTTTaGTGCCGCTCACGAAGATTG +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTACNIF*CRSRRL
Trigger: CAATCTTCGTGAGCGGCAGCAAAAGATGTTACAAGC...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR GCA 90 bp TTATCCCAGCAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTTTATCCCAGCAAATCTaGATTTTAACAAGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: LSQQICILTSSRIHPLKTLSQQI*ILTSSR
Trigger: TCGGGAACTTGTTAAAATGCAGATTTGCTGGGATAA...AGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTGCTGGGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCTATGGCACTTCTTGTaGATATATGTCAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYLWHFL*IYVSCL
Trigger: CAGACAACTGACATATATCCACAAGAAGTGCCATAG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCCTATGGCACTTCTTGTaGATATATGTCAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLLWHFL*IYVSCL
Trigger: CAGACAACTGACATATATCCACAAGAAGTGCCATAG...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGACTGCTATCCTCCATaGAATATACCAGTAAACTAC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYDCYPP*NIPVNY
Trigger: GTAGTTTACTGGTATATTCCATGGAGGATAGCAGTC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGAAAATGAGCTCTTCTaGAAGTGGTATATCTCGTAC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYENELF*KWYISY
Trigger: GTACGAGATATACCACTTCCAGAAGAGCTCATTTTC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCGAAAATGAGCTCTTCTaGAAGTGGTATATCTCGTAC +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLENELF*KWYISY
Trigger: GTACGAGATATACCACTTCCAGAAGAGCTCATTTTC...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp ATTCCCTTTCTCCATTGTACTACGAAAATATTTCTATGCCACCTATGTGACATGAGAGAATCCTGGTACTaGAATGTTCGTTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: IPFLHCTTKIFLCHLCDMRESWY*NVRSSV
Trigger: AACTGAAGAACGAACATTTCAGTACCAGGATTCTCT...CATGTCACATAGGTGGCATAGAAATATTTTCGTAGTACAATGGAGAAAGGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCAAACCTGTCATCTCTaGTATGGTAGAAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYQTCHL*YGRKIH
Trigger: ATGGATTTTTCTACCATATCAGAGATGACAGGTTTG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR TCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACAGCTGTATCATATCATaGAAAGCACAAAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYSCIIS*KAQKVS
Trigger: GCTGACTTTTTGTGCTTTTCATGATATGATACAGCT...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACGTTCACCATAATCATTaGATCAAAAGGAGCATGATC +
Preference number: 4 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYVHHNH*IKRSMI
Trigger: GATCATGCTCCTTTTGATGCAATGATTATGGTGAAC...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR GCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCGTTCACCATAATCATTaGATCAAAAGGAGCATGATC +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLVHHNH*IKRSMI
Trigger: GATCATGCTCCTTTTGATGCAATGATTATGGTGAAC...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR GCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAATAGGCCAGCTGAAGTaGAAGCTGAATAAACGTATC +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTIGQLK*KLNKRI
Trigger: GATACGTTTATTCAGCTTGCACTTCAGCTGGCCTAT...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR GCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACATGTAACATCTTTTGCTaGCGCTCACGAAGATTGACA +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTCNIFC*RSRRLT
Trigger: TGTCAATCTTCGTGAGCGGCAGCAAAAGATGTTACA...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCGAAGCATCTTGTTCTTaGTTAGCTTTTTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLEASCS*LAFCQK
Trigger: CTTTTGGCAAAAAGCTAACCAAGAACAAGATGCTTC...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR TCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAAGCACCTGTCATCTCTaGTATGGTAGAAAAATCCAT +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTSTCHL*YGRKIH
Trigger: ATGGATTTTTCTACCATATCAGAGATGACAGGTGCT...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR GCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAGTGTTACATGTGGACTaGTATCCTCCATGGAATATA +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTVLHVD*YPPWNI
Trigger: TATATTCCATGGAGGATAGCAGTCCACATGTAACAC...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACACCATCAGGTTCACTATaGCACTTCTTGTGGATATAT +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTPSGSL*HFLWIY
Trigger: ATATATCCACAAGAAGTGCCATAGTGAACCTGATGG...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACACAAAGCCAAGTTCTCTaGATCAAGACCAATCAGATA +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTQSQVL*IKTNQI
Trigger: TATCTGATTGGTCTTGATCCAGAGAACTTGGCTTTG...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAGACTGCTATCCTCCATaGAATATACCAGTAAACTAC +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTDCYPP*NIPVNY
Trigger: GTAGTTTACTGGTATATTCCATGGAGGATAGCAGTC...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CCA 90 bp ATTCCCTTTCTCCATTGTACTACGAAAATATTTCTATGCCACCTATGTGACATGTTCAAGCTAGTCACCTaGACAAAATGTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: IPFLHCTTKIFLCHLCDMFKLVT*TKCFPS
Trigger: TGAAGGAAAACATTTTGTCCAGGTGACTAGCTTGAA...CATGTCACATAGGTGGCATAGAAATATTTTCGTAGTACAATGGAGAAAGGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR TCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACATTCATACATGAAATGTaGAGTCTTGCTGACATTAGG +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTFIHEM*SLADIR
Trigger: CCTAATGTCAGCAAGACTTCACATTTCATGTATGAA...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR GCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACATCAAGCAATTTCTGGTaGAATTTTTCTCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTSSNFW*NFSPIP
Trigger: TGGGATTGGAGAAAAATTGCACCAGAAATTGCTTGA...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR GCA 90 bp ATTCCCTTTCTCCATTGTACTACGAAAATATTTCTATGCCACCTATGTGACATGACGAAAATATTTCTATaGCACCTATGTGACATGTCT +
Preference number: 4 (lower is better)
Translates to: IPFLHCTTKIFLCHLCDMTKIFL*HLCDMS
Trigger: AGACATGTCACATAGGTGGCATAGAAATATTTTCGT...CATGTCACATAGGTGGCATAGAAATATTTTCGTAGTACAATGGAGAAAGGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR GCA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACATCCAATAAGGATGGCTaGAATAATCTCAGAATAATC +
Preference number: 4 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTSNKDG*NNLRII
Trigger: GATTATTCTGAGATTATTGCAGCCATCCTTATTGGA...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTAAGAAGATGAACTGCTaGAGACTGCCAGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAKKMNC*RLPGAC
Trigger: GCAGGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTT...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGCACTACAATGTGGTTaGGGGAACGCCCTTCACTCT +
Preference number: 5 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLALQCG*GNALHS
Trigger: AGAGTGAAGGGCGTTCCCCAAACCACATTGTAGTGC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTTGCCGCTCACGAAGATaGACAGAAGGATCCTGCATG +
Preference number: 5 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPACRSRR*TEGSCM
Trigger: CATGCAGGATCCTTCTGTCAATCTTCGTGAGCGGCA...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTCAGCCTTCAAGTAGCTaGGACTACAGGCACACATGC +
Preference number: 5 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAQPSSS*DYRHTC
Trigger: GCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTG...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCCGGCTCGCTCCCCCTaGGGCCTCAAAGGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYPARSP*GLKGAG
Trigger: TCCCGCACCTTTGAGGCCCAAGGGGGAGCGAGCCGG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331536.8
CDS-3UTR CAA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGCAGGACCCGCAAAGTaGACATTCAATTGTGATGGT +
Preference number: 5 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLAGPAK*TFNCDG
Trigger: ACCATCACAATTGAATGTCAACTTTGCGGGTCCTGC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTGCAGGACCCGCAAAGTaGACATTCAATTGTGATGGT +
Preference number: 5 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAAGPAK*TFNCDG
Trigger: ACCATCACAATTGAATGTCAACTTTGCGGGTCCTGC...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGATTGAGTCCCTTCCTTaGGAGGCCAGTAGTGTTCAA +
Preference number: 5 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLIESLP*EASSVQ
Trigger: TTGAACACTACTGGCCTCCAAAGGAAGGGACTCAAT...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTTGCAAATGGTTTCACTaGAATTCCTTCCCGCGTGAG +
Preference number: 5 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPACKWFH*NSFPRE
Trigger: CTCACGCGGGAAGGAATTCAAGTGAAACCATTTGCA...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419147.6
CDS CCA 90 bp TTTTGCTGCCGCTCACGAAGATTGACAGAAGGATCCTGCATGGACTaGCACCACCTCACTGCTTCAACTGTGCATGATCGCATAGTCTCT +
Preference number: 5 (lower is better)
Translates to: FCCRSRRLTEGSCMD*HHLTASTVHDRIVS
Trigger: AGAGACTATGCGATCATGCACAGTTGAAGCAGTGAGGTGGTGCCAGTCCATGCAGGATCCTTCTGTCAATCTTCGTGAGCGGCAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS-3UTR CAA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGCTGCAACAATTGTTTaGAGATCACAGGGAACTGGA +
Preference number: 5 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLAATIV*RSQGTG
Trigger: TCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAGC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGCAGGACCTTACCCTGTaGCCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRQDLTL*PRLVSN
Trigger: GTTTGAGACCAGCCTGGGCAACAGGGTAAGGTCCTG...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS GCA 90 bp CAGTACACCAAGAAGATGAACTGCTTGAGACTGCCAGGAGCCTGCTaGAACAATTGTTTTGAGATCACAGGGAACTGGACTAAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: QYTKKMNCLRLPGAC*NNCFEITGNWTKSV
Trigger: CACCGACTTAGTCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAGCAGGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000412227.6
ENST00000419147.6
ENST00000442291.1
CDS-3UTR CAA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGTCACTATGGCACTTCTaGTGGATATATGTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLSLWHF*WIYVSC
Trigger: ACAACTGACATATATCCACAAGAAGTGCCATAGTGA...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS TCA 90 bp AGGATCCTGCATGGACTGGCACCACCTCACTGCTTCAACTGTGCATaGTCGCATAGTCTCTGTACGGCCATGATAAAAATGTCTTGTCAT +
Preference number: 5 (lower is better)
Translates to: RILHGLAPPHCFNCA*SHSLCTAMIKMSCH
Trigger: ATGACAAGACATTTTTATCATGGCCGTACAGAGACTATGCGATCATGCACAGTTGAAGCAGTGAGGTGGTGCCAGTCCATGCAGGATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS GCA 90 bp AACCAGTACACCAAGAAGATGAACTGCTTGAGACTGCCAGGAGCCTaGTGCAACAATTGTTTTGAGATCACAGGGAACTGGACTAAGTCG +
Preference number: 5 (lower is better)
Translates to: NQYTKKMNCLRLPGA*CNNCFEITGNWTKS
Trigger: CGACTTAGTCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAGCAGGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGTGTACTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000412227.6
ENST00000419147.6
ENST00000442291.1
CDS GCA 90 bp GCAACAACCAGGGTGTCCATGAAGTCTGTAATAGGCCAGCTGAAGTaGAAGCTGAATAAACGTATCCGGGTGAAGCATCTTGTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: ATTRVSMKSVIGQLK*KLNKRIRVKHLVLG
Trigger: ACCAAGAACAAGATGCTTCACCCGGATACGTTTATTCAGCTTGCACTTCAGCTGGCCTATTACAGACTTCATGGACACCCTGGTTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS-3UTR CAA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTTGGGCTTTAGCTTGGTaGATGTCATTTAAAACTTTC +
Preference number: 5 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPAWALAW*MSFKTF
Trigger: GAAAGTTTTAAATGACATCAACCAAGCTAAAGCCCA...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGTGGGCTTTAGCTTGGTaGATGTCATTTAAAACTTTC +
Preference number: 5 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLWALAW*MSFKTF
Trigger: GAAAGTTTTAAATGACATCAACCAAGCTAAAGCCCA...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGTGCCGCTCACGAAGATaGACAGAAGGATCCTGCATG +
Preference number: 5 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRCRSRR*TEGSCM
Trigger: CATGCAGGATCCTTCTGTCAATCTTCGTGAGCGGCA...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp CTCAGCCTTCAAGTAGCTTGGACTACAGGCACACATGCACCACCATACCCGGCTAATAGCCAACCAGACTaGTTGAGAGAACAAAATTTC +
Preference number: 5 (lower is better)
Translates to: LSLQVAWTTGTHAPPYPANSQPD*LREQNF
Trigger: GAAATTTTGTTCTCTCAACAAGTCTGGTTGGCTATT...AGCCGGGTATGGTGGTGCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp AGGGTCTCACGCTCTTGCCCAGGCTATAGCATAAGGGCACATCACAGCTCACTGGTTTGTAGATTTGGATaGTTGAGGCTTAAATACTGC +
Preference number: 5 (lower is better)
Translates to: RVSRSCPGYSIRAHHSSLVCRFG*LRLKYC
Trigger: GCAGTATTTAAGCCTCAACAATCCAAATCTACAAAC...CAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGCGTGAGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGCAGCCTTCAAGTAGCTaGGACTACAGGCACACATGC +
Preference number: 5 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRQPSSS*DYRHTC
Trigger: GCATGTGTGCCTGTAGTCCAAGCTACTTGAAGGCTG...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS CCA 90 bp TCCTCACTAGTTAATGCTGCAATCCCAGGTCCATCAGGTTCACTATaGCACTTCTTGTGGATATATGTCAGTTGTCTGAGAAGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SSLVNAAIPGPSGSL*HFLWIYVSCLRSSG
Trigger: GCCAGAGCTTCTCAGACAACTGACATATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGATTGCAGCATTAACTAGTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS-3UTR CAA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACCAGGACCTTACCCTGTaGCCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYQDLTL*PRLVSN
Trigger: GTTTGAGACCAGCCTGGGCAACAGGGTAAGGTCCTG...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS TCA 90 bp GTGTTCAAAATGAGCTGCAGGACCCGCAAAGTTGACATTCAATTGTaGTGGTATACGAACATCCAGATAGGCAACATTCAGCCACCACTC +
Preference number: 5 (lower is better)
Translates to: VFKMSCRTRKVDIQL*WYTNIQIGNIQPPL
Trigger: GAGTGGTGGCTGAATGTTGCCTATCTGGATGTTCGTATACCATCACAATTGAATGTCAACTTTGCGGGTCCTGCAGCTCATTTTGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS-3UTR CAA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTAAGAAGATGAACTGCTaGAGACTGCCAGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QICILTSSRIHPLKTPKVKKMNC*RLPGAC
Trigger: GCAGGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTT...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS TCA 90 bp TTGGAGGCCAGTAGTGTTCAAAATGAGCTGCAGGACCCGCAAAGTTaGCATTCAATTGTGATGGTATACGAACATCCAGATAGGCAACAT +
Preference number: 5 (lower is better)
Translates to: LEASSVQNELQDPQS*HSIVMVYEHPDRQH
Trigger: ATGTTGCCTATCTGGATGTTCGTATACCATCACAATTGAATGTCAACTTTGCGGGTCCTGCAGCTCATTTTGAACACTACTGGCCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS-3UTR CAA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGGCTGCAACAATTGTTTaGAGATCACAGGGAACTGGA +
Preference number: 5 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRAATIV*RSQGTG
Trigger: TCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAGC...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCTGCCGCTCACGAAGATaGACAGAAGGATCCTGCATG +
Preference number: 5 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLCRSRR*TEGSCM
Trigger: CATGCAGGATCCTTCTGTCAATCTTCGTGAGCGGCA...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS CCA 90 bp TCCTCACTAGTTAATGCTGCAATCCCAGGTCCATCAGGTTCACTATaGCACTTCTTGTGGATATATGTCAGTTGTCTTATGGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: SSLVNAAIPGPSGSL*HFLWIYVSCLMEDE
Trigger: TTCATCTTCCATAAGACAACTGACATATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGATTGCAGCATTAACTAGTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469785.1
CDS-3UTR CAA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTGCTGCAACAATTGTTTaGAGATCACAGGGAACTGGA +
Preference number: 5 (lower is better)
Translates to: QICILTSSRIHPLKTPKVAATIV*RSQGTG
Trigger: TCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAGC...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR CAA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAAAGAAGATGAACTGCTaGAGACTGCCAGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTKKMNC*RLPGAC
Trigger: GCAGGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTT...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCGCAGGACCCGCAAAGTaGACATTCAATTGTGATGGT +
Preference number: 5 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLAGPAK*TFNCDG
Trigger: ACCATCACAATTGAATGTCAACTTTGCGGGTCCTGC...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCATTGAGTCCCTTCCTTaGGAGGCCAGTAGTGTTCAA +
Preference number: 5 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLIESLP*EASSVQ
Trigger: TTGAACACTACTGGCCTCCAAAGGAAGGGACTCAAT...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAGCACTACAATGTGGTTaGGGGAACGCCCTTCACTCT +
Preference number: 5 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTALQCG*GNALHS
Trigger: AGAGTGAAGGGCGTTCCCCAAACCACATTGTAGTGC...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCGCTGCAACAATTGTTTaGAGATCACAGGGAACTGGA +
Preference number: 5 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLAATIV*RSQGTG
Trigger: TCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAGC...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGAATAGCCAACCAGACTaGTTGAGAGAACAAAATTTC +
Preference number: 5 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRNSQPD*LREQNF
Trigger: GAAATTTTGTTCTCTCAACAAGTCTGGTTGGCTATT...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp TGGTCTTTCCCATCAAACATAACAGGCTTGTATCCCTGTGGTGAACATAGAAGGGTTTGTAGATTTGGATaGTTGAGGCTTAAATACTGC +
Preference number: 5 (lower is better)
Translates to: WSFPSNITGLYPCGEHRRVCRFG*LRLKYC
Trigger: GCAGTATTTAAGCCTCAACAATCCAAATCTACAAAC...CCTTCTATGTTCACCACAGGGATACAAGCCTGTTATGTTTGATGGGAAAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTACTCAAGGCTCAAAATaGAGAACAAAGGAATCCGGA +
Preference number: 5 (lower is better)
Translates to: QICILTSSRIHPLKTPKVTQGSK*RTKESG
Trigger: TCCGGATTCCTTTGTTCTCAATTTTGAGCCTTGAGT...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS CCA 90 bp AGAAAAGGAAATCAAGTTATAGGATTTGTCACCCCAGCGTACTGTTaGATCTCCAATAAGGATGGCTGCAATAATCTCAGAATAATCCTC +
Preference number: 5 (lower is better)
Translates to: RKGNQVIGFVTPAYC*ISNKDGCNNLRIIL
Trigger: GAGGATTATTCTGAGATTATTGCAGCCATCCTTATTGGAGATCCAACAGTACGCTGGGGTGACAAATCCTATAACTTGATTTCCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
ENST00000479014.1
CDS-3UTR CAA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACTCAAACATAACAGGCTaGTATCCCTGTGGTGAACAT +
Preference number: 5 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYSNITG*YPCGEH
Trigger: ATGTTCACCACAGGGATACAAGCCTGTTATGTTTGA...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS CCA 90 bp AATGCTGCAATCCCAGGTCCATCAGGTTCACTATGGCACTTCTTGTaGATATATGTCAGTTGTCTTATGGAAGATGAAAAGAAGATTAAA +
Preference number: 5 (lower is better)
Translates to: NAAIPGPSGSLWHFL*IYVSCLMEDEKKIK
Trigger: TTTAATCTTCTTTTCATCTTCCATAAGACAACTGACATATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGATTGCAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469785.1
CDS-3UTR CAA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCTCACTATGGCACTTCTaGTGGATATATGTCAGTTGT +
Preference number: 5 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLSLWHF*WIYVSC
Trigger: ACAACTGACATATATCCACAAGAAGTGCCATAGTGA...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp CAAATCTGCATTTTAACAAGTTCCCGAATCCACCCACTGAAAACTCCCAAAGTTACTAAGGCAATGCTTTaGAATTATACAACCTCATCC +
Preference number: 5 (lower is better)
Translates to: QICILTSSRIHPLKTPKVTKAML*NYTTSS
Trigger: GGATGAGGTTGTATAATTCAAAAGCATTGCCTTAGT...AACTTTGGGAGTTTTCAGTGGGTGGATTCGGGAACTTGTTAAAATGCAGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412227.6
CDS-3UTR CAA 90 bp CCTGACACAATTGAAGGTAAAGCCATATCTGTAGATAATGCTAAGAAACACCTCTGGGCTTTAGCTTGGTaGATGTCATTTAAAACTTTC +
Preference number: 5 (lower is better)
Translates to: PDTIEGKAISVDNAKKHLWALAW*MSFKTF
Trigger: GAAAGTTTTAAATGACATCAACCAAGCTAAAGCCCA...GAGGTGTTTCTTAGCATTATCTACAGATATGGCTTTACCTTCAATTGTGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp AAGATGGACTCTACATTGATGTCCAGAGAGAGGATTTATAACCCATGTAAGTACTTCTTGGTTAGCTTTTaGCCAAAAGATGTAAAGGCA +
Preference number: 5 (lower is better)
Translates to: KMDSTLMSRERIYNPCKYFLVSF*PKDVKA
Trigger: TGCCTTTACATCTTTTGGCAAAAAGCTAACCAAGAA...GTACTTACATGGGTTATAAATCCTCTCTCTGGACATCAATGTAGAGTCCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS-3UTR CAA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACATGTAACCTGACACAATaGAAGGTAAAGCCATATCTG +
Preference number: 5 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTCNLTQ*KVKPYL
Trigger: CAGATATGGCTTTACCTTCAATTGTGTCAGGTTACA...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACATTCTTGGTTAGCTTTTaGCCAAAAGATGTAAAGGCA +
Preference number: 5 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTFLVSF*PKDVKA
Trigger: TGCCTTTACATCTTTTGGCAAAAAGCTAACCAAGAA...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS-3UTR CAA 90 bp CAGGACTTTATTTCATCTGGATATTCATACATGAAATGTGAAGTCTTGCTGACAAATAGCCAACCAGACTaGTTGAGAGAACAAAATTTC +
Preference number: 5 (lower is better)
Translates to: QDFISSGYSYMKCEVLLTNSQPD*LREQNF
Trigger: GAAATTTTGTTCTCTCAACAAGTCTGGTTGGCTATT...TGTCAGCAAGACTTCACATTTCATGTATGAATATCCAGATGAAATAAAGTCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442291.1
CDS CCA 72 bp GCCTGCTGCAACAATTGTTTTGAGATCACAGGGAACTaGACTAAGTCGGTGACTGTCCGTCCTCACCGCCCG +
Preference number: 6 (lower is better)
Translates to: ACCNNCFEITGN*TKSVTVRPHRP
Trigger: CGGGCGGTGAGGACGGACAGTCACCGACTTAGTCCAGTTCCCTGTGATCTCAAAACAATTGTTGCAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000412227.6
ENST00000419147.6
CDS CCA 72 bp CGCTCACGAAGATTGACAGAAGGATCCTGCATGGACTaGCACCACCTCACTGCTTCAACTGTGCATGATCGC +
Preference number: 6 (lower is better)
Translates to: RSRRLTEGSCMD*HHLTASTVHDR
Trigger: GCGATCATGCACAGTTGAAGCAGTGAGGTGGTGCCAGTCCATGCAGGATCCTTCTGTCAATCTTCGTGAGCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS GCA 72 bp TTTTGCTGCCGCTCACGAAGATTGACAGAAGGATCCTaGATGGACTGGCACCACCTCACTGCTTCAACTGTG +
Preference number: 6 (lower is better)
Translates to: FCCRSRRLTEGS*MDWHHLTASTV
Trigger: CACAGTTGAAGCAGTGAGGTGGTGCCAGTCCATGCAGGATCCTTCTGTCAATCTTCGTGAGCGGCAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS CAA 90 bp GTTAATGCTGCAATCCCAGGTCCATCAGGTTCACTATGGCACTTCTaGTGGATATATGTCAGTTGTCTGAGAAGCTCTGGCGGGGTGACC +
Preference number: 6 (lower is better)
Translates to: VNAAIPGPSGSLWHF*WIYVSCLRSSGGVT
Trigger: GGTCACCCCGCCAGAGCTTCTCAGACAACTGACATATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGATTGCAGCATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS TCA 72 bp CTTTTCCGCATCAGTCTCGGGACAGGATTTCCAGGCTaGACAGGCCACAACAAACCTGTCATCTCTGATATG +
Preference number: 6 (lower is better)
Translates to: LFRISLGTGFPG*TGHNKPVISDM
Trigger: CATATCAGAGATGACAGGTTTGTTGTGGCCTGTTCAGCCTGGAAATCCTGTCCCGAGACTGATGCGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331536.8
ENST00000419147.6
CDS CCA 72 bp AAGACAAAAGCTCGGCCTCGACACAGCACTACAATGTaGTTTGGGGAACGCCCTTCACTCTCAGTCCTAAAA +
Preference number: 6 (lower is better)
Translates to: KTKARPRHSTTM*FGERPSLSVLK
Trigger: TTTTAGGACTGAGAGTGAAGGGCGTTCCCCAAACCACATTGTAGTGCTGTGTCGAGGCCGAGCTTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
ENST00000488850.1
CDS CCA 72 bp ATCCCAGGTCCATCAGGTTCACTATGGCACTTCTTGTaGATATATGTCAGTTGTCTGAGAAGCTCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: IPGPSGSLWHFL*IYVSCLRSSGG
Trigger: CCCGCCAGAGCTTCTCAGACAACTGACATATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS TCA 72 bp CATGGACTGGCACCACCTCACTGCTTCAACTGTGCATaGTCGCATAGTCTCTGTACGGCCATGATAAAAATG +
Preference number: 6 (lower is better)
Translates to: HGLAPPHCFNCA*SHSLCTAMIKM
Trigger: CATTTTTATCATGGCCGTACAGAGACTATGCGATCATGCACAGTTGAAGCAGTGAGGTGGTGCCAGTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS GCA 72 bp ACCAAGAAGATGAACTGCTTGAGACTGCCAGGAGCCTaGTGCAACAATTGTTTTGAGATCACAGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: TKKMNCLRLPGA*CNNCFEITGNW
Trigger: CCAGTTCCCTGTGATCTCAAAACAATTGTTGCAGCAGGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000412227.6
ENST00000419147.6
ENST00000442291.1
CDS GCA 72 bp AGGGTGTCCATGAAGTCTGTAATAGGCCAGCTGAAGTaGAAGCTGAATAAACGTATCCGGGTGAAGCATCTT +
Preference number: 6 (lower is better)
Translates to: RVSMKSVIGQLK*KLNKRIRVKHL
Trigger: AAGATGCTTCACCCGGATACGTTTATTCAGCTTGCACTTCAGCTGGCCTATTACAGACTTCATGGACACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS CCA 72 bp AAAAGCTCGGCCTCGACACAGCACTACAATGTGGTTTaGGGAACGCCCTTCACTCTCAGTCCTAAAATAATT +
Preference number: 6 (lower is better)
Translates to: KSSASTQHYNVV*GTPFTLSPKII
Trigger: AATTATTTTAGGACTGAGAGTGAAGGGCGTTCCCCAAACCACATTGTAGTGCTGTGTCGAGGCCGAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
ENST00000488850.1
CDS CAA 72 bp CTACCACTCCCTGGACTCGTAAATAGCCAACCAGACTaGTTGAGAGAACAAAATTTCCACCTCCTCCGCTTT +
Preference number: 6 (lower is better)
Translates to: LPLPGLVNSQPD*LREQNFHLLRF
Trigger: AAAGCGGAGGAGGTGGAAATTTTGTTCTCTCAACAAGTCTGGTTGGCTATTTACGAGTCCAGGGAGTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS GCA 72 bp ATCACAATAGGAAACCAGTACACCAAGAAGATGAACTaGTTGAGACTGCCAGGAGCCTGCTGCAACAATTGT +
Preference number: 6 (lower is better)
Translates to: ITIGNQYTKKMN*LRLPGACCNNC
Trigger: ACAATTGTTGCAGCAGGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGTGTACTGGTTTCCTATTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000412227.6
ENST00000419147.6
ENST00000442291.1
CDS CAA 90 bp TATGCCAAAGAGTTATACTTCCTCTTTCTAATTGAGTCCCTTCCTTaGGAGGCCAGTAGTGTTCAAAATGAGCTGCAGGACCCGCAAAGT +
Preference number: 6 (lower is better)
Translates to: YAKELYFLFLIESLP*EASSVQNELQDPQS
Trigger: ACTTTGCGGGTCCTGCAGCTCATTTTGAACACTACTGGCCTCCAAAGGAAGGGACTCAATTAGAAAGAGGAAGTATAACTCTTTGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
ENST00000488850.1
CDS CCA 72 bp GTTAATGCTGCAATCCCAGGTCCATCAGGTTCACTATaGCACTTCTTGTGGATATATGTCAGTTGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: VNAAIPGPSGSL*HFLWIYVSCLR
Trigger: TCTCAGACAACTGACATATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGATTGCAGCATTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS CAA 72 bp ACAATAGGAAACCAGTACACCAAGAAGATGAACTGCTaGAGACTGCCAGGAGCCTGCTGCAACAATTGTTTT +
Preference number: 6 (lower is better)
Translates to: TIGNQYTKKMNC*RLPGACCNNCF
Trigger: AAAACAATTGTTGCAGCAGGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGTGTACTGGTTTCCTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000412227.6
ENST00000419147.6
ENST00000442291.1
CDS CAA 72 bp GAGTTATACTTCCTCTTTCTAATTGAGTCCCTTCCTTaGGAGGCCAGTAGTGTTCAAAATGAGCTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: ELYFLFLIESLP*EASSVQNELQD
Trigger: GTCCTGCAGCTCATTTTGAACACTACTGGCCTCCAAAGGAAGGGACTCAATTAGAAAGAGGAAGTATAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
ENST00000488850.1
CDS CCA 72 bp GTTAATGCTGCAATCCCAGGTCCATCAGGTTCACTATaGCACTTCTTGTGGATATATGTCAGTTGTCTTATG +
Preference number: 6 (lower is better)
Translates to: VNAAIPGPSGSL*HFLWIYVSCLM
Trigger: CATAAGACAACTGACATATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGATTGCAGCATTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469785.1
CDS CAA 90 bp GATAAAATCACAATAGGAAACCAGTACACCAAGAAGATGAACTGCTaGAGACTGCCAGGAGCCTGCTGCAACAATTGTTTTGAGATCACA +
Preference number: 6 (lower is better)
Translates to: DKITIGNQYTKKMNC*RLPGACCNNCFEIT
Trigger: TGTGATCTCAAAACAATTGTTGCAGCAGGCTCCTGGCAGTCTCAAGCAGTTCATCTTCTTGGTGTACTGGTTTCCTATTGTGATTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000412227.6
ENST00000419147.6
ENST00000442291.1
CDS TCA 72 bp AGTAGTGTTCAAAATGAGCTGCAGGACCCGCAAAGTTaGCATTCAATTGTGATGGTATACGAACATCCAGAT +
Preference number: 6 (lower is better)
Translates to: SSVQNELQDPQS*HSIVMVYEHPD
Trigger: ATCTGGATGTTCGTATACCATCACAATTGAATGTCAACTTTGCGGGTCCTGCAGCTCATTTTGAACACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS GCA 72 bp TTATTATGCTTTGCAAAAGCTTGTAACATCTTTTGCTaGCGCTCACGAAGATTGACAGAAGGATCCTGCATG +
Preference number: 6 (lower is better)
Translates to: LLCFAKACNIFC*RSRRLTEGSCM
Trigger: CATGCAGGATCCTTCTGTCAATCTTCGTGAGCGGCAGCAAAAGATGTTACAAGCTTTTGCAAAGCATAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
CDS CCA 72 bp AATCAAGTTATAGGATTTGTCACCCCAGCGTACTGTTaGATCTCCAATAAGGATGGCTGCAATAATCTCAGA +
Preference number: 6 (lower is better)
Translates to: NQVIGFVTPAYC*ISNKDGCNNLR
Trigger: TCTGAGATTATTGCAGCCATCCTTATTGGAGATCCAACAGTACGCTGGGGTGACAAATCCTATAACTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
ENST00000479014.1
CDS CAA 90 bp GTTAATGCTGCAATCCCAGGTCCATCAGGTTCACTATGGCACTTCTaGTGGATATATGTCAGTTGTCTTATGGAAGATGAAAAGAAGATT +
Preference number: 6 (lower is better)
Translates to: VNAAIPGPSGSLWHF*WIYVSCLMEDEKKI
Trigger: AATCTTCTTTTCATCTTCCATAAGACAACTGACATATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGATTGCAGCATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469785.1
CDS CAA 72 bp TTTCTTATATTCTTCTTGATTTGCAAATGGTTTCACTaGAATTCCTTCCCGCGTGAGATCCAAGAACCCTCT +
Preference number: 6 (lower is better)
Translates to: FLIFFLICKWFH*NSFPREIQEPS
Trigger: AGAGGGTTCTTGGATCTCACGCGGGAAGGAATTCAAGTGAAACCATTTGCAAATCAAGAAGAATATAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419147.6
CDS GCA 72 bp CTCATCCACATAATAACTGATGTTCACCATAATCATTaGATCAAAAGGAGCATGATCACAATTACAGCCAAA +
Preference number: 6 (lower is better)
Translates to: LIHIITDVHHNH*IKRSMITITAK
Trigger: TTTGGCTGTAATTGTGATCATGCTCCTTTTGATGCAATGATTATGGTGAACATCAGTTATTATGTGGATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331536.8
ENST00000419147.6
ENST00000442291.1
ENST00000479014.1