Pregenerated sensors for CROCC (Homo sapiens)
Ensembl gene IDs: ENSG00000058453Ensembl transcript IDs: ENST00000375541.10, ENST00000445545.6, ENST00000465021.5, ENST00000465291.1, ENST00000466256.6, ENST00000494191.6, ENST00000498688.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCACCCGTCCTCAGCACTaGCAGCAGAGCGCCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GGEISGKPKSGPGPLTPATRPQH*QQSASS Trigger: TGAGGAGGCGCTCTGCTGGCAGTGCTGAGGACGGGT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| 3UTR-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCTGGACTGCAGGTGTTaGTGGGAAGCCTCTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GGEISGKPKSGPGPLTPALDCRC*WEASPG Trigger: GCCTGGAGAGGCTTCCCAGCAACACCTGCAGTCCAG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| 3UTR-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGGCTCTCCCCAATCCTaGCTACGGCTCAGCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GGEISGKPKSGPGPLTPAGSPQS*LRLSLS Trigger: TGAGAGGCTGAGCCGTAGCCAGGATTGGGGAGAGCC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| 3UTR-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTTTAATGATCTACAGTaGCTCATCCTAGAAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GGEISGKPKSGPGPLTPAFNDLQ*LILEEG Trigger: CCCCTCTTCTAGGATGAGCCACTGTAGATCATTAAA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR TCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGGGCCTCGCGGTCACTaGGGCCCAGGCGGCTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAGPRGH*GPGGCA Trigger: AGCGCAGCCGCCTGGGCCTCAGTGACCGCGAGGCCC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR TCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCCAGCTCAGCCCCCGTaGGGGTGCGGTCCAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAPAQPP*GCGPGG Trigger: GCCGCCTGGACCGCACCCTCACGGGGGCTGAGCTGG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCCAGCGCCTCCACTTaGCGCTGGGCCTCCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASSAST*RWASRR Trigger: CCGGCGGGAGGCCCAGCGGCAAGTGGAGGCGCTGGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCCCGCCCGCTCAGCTaGCGGGAGAGCTGCGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASRPLS*RESCAS Trigger: GCTAGCGCAGCTCTCCCGGCAGCTGAGCGGGCGGGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGCCTGCTCCAGCTCCTaGTCCCGCCCGCTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAACSSS*SRPLSC Trigger: GCAGCTGAGCGGGCGGGAGCAGGAGCTGGAGCAGGC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCCCAGGCGGCTGCGCTaGAGCTCCCCCTCAAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAPRRLR*SSPSSE Trigger: CTCGCTTGAGGGGGAGCTGCAGCGCAGCCGCCTGGG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAGGGTGCGCTCAGTCTaGGCCTGGGCGCTGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPARVRSV*AWALRS Trigger: GCTGCGCAGCGCCCAGGCGCAGACTGAGCGCACCCT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR TCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGGCAGGCTGGTGATCTaGGCGTCCTGGGCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAGRLVI*ASWARS Trigger: GGACCTGGCCCAGGACGCTCAGATCACCAGCCTGCC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTTCCCCGCTTCCTTCTaGGGGTGCGTCCCGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAFPASF*GCVPGR Trigger: CCTGCCCGGGACGCACCCGCAGAAGGAAGCGGGGAA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCACCCTCCTGCCGCTaGCGCAGCACCTCCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASPSCR*RSTSRS Trigger: GCTACGGGAGGTGCTGCGGCAGCGGCAGGAGGGTGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGCCGGGCTGTGGCTCTaGTCCAGCACCACCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAAGLWL*SSTTTC Trigger: GCAGGTGGTGGTGCTGGAGCAGAGCCACAGCCCGGC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGGCCGGCAGCAGGACTaGGCTCTCAGGCTGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAGRQQD*ALRLGE Trigger: CTCTCCCAGCCTGAGAGCCCAGTCCTGCTGCCGGCC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAGCTGGGCCGGGCTGTaGCTCTGCTCCAGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASWAGL*LCSSTT Trigger: GGTGGTGCTGGAGCAGAGCCACAGCCCGGCCCAGCT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGCATCCACCTCCAGCTaGGCCGGGCTGTGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAASTSS*AGLWLC Trigger: GCAGAGCCACAGCCCGGCCCAGCTGGAGGTGGATGC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR TCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTGTCCCGGGTGCTGTTaGGGCTGGCACTGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPACPGCC*GWHCSG Trigger: CCCAGAGCAGTGCCAGCCTCAACAGCACCCGGGACA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR TCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTTCTCAGCTTCCAGCTaGGCCAGGGCGCGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAFSASS*ARARCR Trigger: CCTGCAGCGCGCCCTGGCTCAGCTGGAAGCTGAGAA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAGCTGCCGGGAGAGCTaGGCTAGCTGCTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASCRES*ASCSCS Trigger: GCTGCAGGAGCAGCTAGCGCAGCTCTCCCGGCAGCT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGCCGCCCATCCACACTaGGCCGGGCTTCCTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAAAHPH*AGLPHS Trigger: AGAGTGAGGAAGCCCGGCGCAGTGTGGATGGGCGGC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGCTCGCCCAGGGAGCTaGTCTGCTTCCGTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAARPGS*SASVPQ Trigger: CTGAGGCACGGAAGCAGAGCAGCTCCCTGGGCGAGC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGACGGTGTTCAGGGCTaGAGCCTCACCCTCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPADGVQG*SLTLLP Trigger: CGGCAGGAGGGTGAGGCTGCAGCCCTGAACACCGTC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCGCCCACGCATGTCCTaGACCTGCAGCTGGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPARPRMS*TCSWRL Trigger: CAAGCGCCAGCTGCAGGTCCAGGACATGCGTGGGCG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGGCAGGTCCTGGAGATaGTGGCTGGGACCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAGRSWR*WLGPRA Trigger: AGCCCTGGGTCCCAGCCACCATCTCCAGGACCTGCC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR TCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAGGTGCTGGGGCTGTTaGGCCCTTCCCCGCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPARCWGC*ALPRFL Trigger: AAGGAAGCGGGGAAGGGCTCAACAGCCCCAGCACCT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCAGAGCGTTCACGGTaGTCCGGTCCTGCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASERSR*SGPAPA Trigger: GGCAGGAGCAGGACCGGAGCACCGTGAACGCTCTGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGCTACCTGGAGCTCCTaGCGCATCACCTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAATWSS*RITSRL Trigger: CAGCCTGGAGGTGATGCGGCAGGAGCTCCAGGTAGC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCGCTCTCGGTGGCCTaGAGGCTCCTCTCCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASLSVA*RLLSSV Trigger: CACACTGGAGAGGAGCCTGCAGGCCACCGAGAGCGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGCCTCAGATAATGCCTaGCGGGCGGCATCCAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAASDNA*RAASSR Trigger: ACGGCTGGATGCCGCCCGGCAGGCATTATCTGAGGC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCCAGCACCACCACCTaGGCCTCCAGCTGCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASSTTT*ASSCWI Trigger: GATCCAGCAGCTGGAGGCGCAGGTGGTGGTGCTGGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCCAGCTGCTGCTGCTaGGCATCCACCTCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASSCCC*ASTSSW Trigger: CCAGCTGGAGGTGGATGCGCAGCAGCAGCAGCTGGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTGCTGCAGCTCCAGCTaGTGCTGCTGCGCATCCACC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPACCSSS*CCCAST Trigger: GGTGGATGCGCAGCAGCAGCAGCTGGAGCTGCAGCA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCACCGAAGCTCCTCATTaGAACGCCGCAGGGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPATEAPH*NAAGPR Trigger: GCGAGGCCCTGCGGCGTTCCAATGAGGAGCTTCGGT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAGGAGCTCATTTCTCTaGGGGGCCGGAGGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPARSSFL*GAGGWG Trigger: TCCCCACCCTCCGGCCCCCCAGAGAAATGAGCTCCT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR TCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTGGCAAGCTTCAGGCTaGTGCGCTCGCTCTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAWQASG*CARSLP Trigger: AGGCAGAGAGCGAGCGCATCAGCCTGAAGCTTGCCA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR TCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCCAGCATCTTCATCTaGCGCCGGAGCTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASSIFI*RRSSCS Trigger: GCTGCAGGAGCTCCGGCGTCAGATGAAGATGCTGGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR TCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTGTCCAGCGTCCTCCTaGGGGCTACACGGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPACPASS*GLHGPS Trigger: AGAAGGACCGTGTAGCCCTCAGGAGGACGCTGGACA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAGCTGGTTCTCCTCCTaGAGCGACAGCAGCGATGCC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASWFSS*SDSSDA Trigger: GGCATCGCTGCTGTCGCTGCAGGAGGAGAACCAGCT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGGTTGCTCTTCTCCCTaGTCAGGAGCTCGTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAGCSSP*SGARWR Trigger: GCGCCAACGAGCTCCTGAGCAGGGAGAAGAGCAACC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCTCCAGCTCCCGCCATaGTGCCTCCTTTTCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPALQLPP*CLLFTL Trigger: CAGCGTGAAAAGGAGGCAGCATGGCGGGAGCTGGAG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCAAGCGAGCGCCGCTaGAGCTCCAGCTTGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASSERR*SSSLTV Trigger: CACTGTCAAGCTGGAGCTGCAGCGGCGCTCGCTTGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAGCCGCCGCTCGTCTTaGAGCTTCTGGACGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASRRSS*SFWTVF Trigger: GAACACCGTCCAGAAGCTGCAAGACGAGCGGCGGCT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCCCAAGCCTTTCTCCTaGCACAGGACGCTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAPKPFS*HRTLLS Trigger: GGAGAGCAGCGTCCTGTGCCAGGAGAAAGGCTTGGG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCGTCCCGTTCTCTCTaGGCACTCCGCAGCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASSRSL*ALRSSC Trigger: GCAAGAGCTGCGGAGTGCCCAGAGAGAACGGGACGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTTGCTGATCTTCTCCTaGCTGGCCCGGAGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPALLIFS*LARSSL Trigger: GAGCGAGCTCCGGGCCAGCCAGGAGAAGATCAGCAA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCTAGTTGTCTATGGCTaGGCTCAAGCTCCCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPALVVYG*AQAPGA Trigger: TGCGCCGGGAGCTTGAGCGCAGCCATAGACAACTAG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGGTCCGAAGCTCTTCTaGCTCGCGAAGACAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAGPKLF*LAKTGV Trigger: GACTCCTGTCTTCGCGAGGCAGAAGAGCTTCGGACC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCTTCGAAGCTCCTGCTaGAGCTGGCCCTTCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPALRSSC*SWPFSV Trigger: CACACTGAAGGGCCAGCTGCAGCAGGAGCTTCGAAG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCTCCTTCGAAGCTCCTaGTGCAGCTGGCCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPALLRSS*CSWPFS Trigger: ACTGAAGGGCCAGCTGCAGCAGGAGCTTCGAAGGAG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTGCTCTAGTTGTCTATaGCTGCGCTCAAGCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPACSSCL*LRSSSR Trigger: CCGGGAGCTTGAGCGCAGCCATAGACAACTAGAGCA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGCATCCAGCCGTTCCTaGAGTACTTGGCGGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAASSRS*STWRSC Trigger: ACATGACCGCCAAGTACTCCAGGAACGGCTGGATGC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTCGTCTTGCAGCTTCTaGACGGTGTTCAGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPASSCSF*TVFRAA Trigger: TGCAGCCCTGAACACCGTCCAGAAGCTGCAAGACGA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTGTACTGGAGAATCTTaGCCTGCAGCCGCTGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPACTGES*PAAAAQ Trigger: TTGTGCAGCGGCTGCAGGGCAAGATTCTCCAGTACA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAGAGACAAGGCCTGCTaGTTCTCACTCTCTGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPARDKAC*FSLSAR Trigger: CCTAGCAGAGAGTGAGAAGCAGCAGGCCTTGTCTCT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGGGGTGTTCTCCAGATaGCAGCAGGAGCTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAGVFSR*QQELIS Trigger: AGAAATGAGCTCCTGCTGGCATCTGGAGAACACCCC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTTTTCTTCCTCCAGCTaGGCGACAAGGCGGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAFSSSS*ATRRFR Trigger: TCTGAACCGCCTTGTCGCCCAGCTGGAGGAAGAAAA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR GCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTTCAGAGACAAGGCCTaGTGCTTCTCACTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAFRDKA*CFSLSA Trigger: AGCAGAGAGTGAGAAGCAGCAGGCCTTGTCTCTGAA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCTGCTCTCCAGTGTCTaGATAACCGTCTCTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPALLSSV*ITVSSV Trigger: GACACTAGAGACGGTTATCCAGACACTGGAGAGCAG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CCA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCACCTCTTCTTGTACTaGAGAATCTTGCCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGEISGKPKSGPGPLTPAHLFLY*RILPCS Trigger: GCTGCAGGGCAAGATTCTCCAGTACAAGAAGAGGTG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS GCA 90 bp | AGGCCCAGGCGGCTGCGCTGCAGCTCCCCCTCAAGCGAGCGCCGCTaGAGCTCCAGCTTGACAGTGCGGCTCTCGGAGGCGTCCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: RPRRLRCSSPSSERR*SSSLTVRLSEASRT Trigger: GGTTCTGGACGCCTCCGAGAGCCGCACTGTCAAGCTGGAGCTGCAGCGGCGCTCGCTTGAGGGGGAGCTGCAGCGCAGCCGCCTGGGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375541.10 ENST00000465021.5 |
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| CDS-3UTR CAA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCGGCCAGCCTCAGCCTaGGTCAGCGCCTCGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GGEISGKPKSGPGPLTPARPASA*VSASAT Trigger: GGTGGCCGAGGCGCTGACCAAGGCTGAGGCTGGCCG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS CCA 90 bp | CCATCCCTCCATGGCCCGCTGGGTCACTGGAAGGCTCAGGGCTCCTaGGGGAGGGGGTTATGGGCCCTGGGCTGGCTGGGCCATCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLHGPLGHWKAQGS*GRGLWALGWLGHQL Trigger: GAGCTGATGGCCCAGCCAGCCCAGGGCCCATAACCCCCTCCCCCAGGAGCCCTGAGCCTTCCAGTGACCCAGCGGGCCATGGAGGGATGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465291.1 |
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| CDS-3UTR CAA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAGCTCCCCGGCCTCCTaGCCCACAGCTGTCCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGEISGKPKSGPGPLTPASSPAS*PTAVRA Trigger: GGCACGGACAGCTGTGGGCAAGGAGGCCGGGGAGCT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS GCA 90 bp | CCTCCTGCAGGTAAGGAAACTGAGGCCCCCAAGAGGGCAGTGGCCTaGCCCAGGGCTCCTAGCTGCCAAGTGGCAGAGCAGGGCCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPAGKETEAPKRAVA*PRAPSCQVAEQGPA Trigger: GGCCGGGCCCTGCTCTGCCACTTGGCAGCTAGGAGCCCTGGGGCAGGCCACTGCCCTCTTGGGGGCCTCAGTTTCCTTACCTGCAGGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494191.6 |
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| CDS-3UTR CAA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCGACCGAAGCTCCTCATaGGAACGCCGCAGGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGEISGKPKSGPGPLTPADRSSS*ERRRAS Trigger: CGAGGCCCTGCGGCGTTCCAATGAGGAGCTTCGGTC...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CAA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCAAGGTGCTGGGGCTGTaGAGCCCTTCCCCGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGEISGKPKSGPGPLTPAKVLGL*SPSPLP Trigger: AGGAAGCGGGGAAGGGCTCAACAGCCCCAGCACCTT...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CAA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTTGTCCCGGGTGCTGTaGAGGCTGGCACTGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGEISGKPKSGPGPLTPALSRVL*RLALLW Trigger: CCAGAGCAGTGCCAGCCTCAACAGCACCCGGGACAA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CAA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCAGCCGCCGCTCGTCTaGCAGCTTCTGGACGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGEISGKPKSGPGPLTPAQPPLV*QLLDGV Trigger: AACACCGTCCAGAAGCTGCAAGACGAGCGGCGGCTG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CAA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTTCTCCCGCTCCACCTaGTCCAGCGTCCTCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGEISGKPKSGPGPLTPAFSRST*SSVLLR Trigger: CCTCAGGAGGACGCTGGACAAGGTGGAGCGGGAGAA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS-3UTR CAA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCTTGTACTGGAGAATCTaGCCCTGCAGCCGCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GGEISGKPKSGPGPLTPALYWRI*PCSRCT Trigger: TGTGCAGCGGCTGCAGGGCAAGATTCTCCAGTACAA...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS TCA 90 bp | ATACAAGGGAGTGATAAGGGCTATGACGGGGACACGCCAGGGCCGTaGAAGTGCCAAGGAGCAGCAGTGGGCTGGCCTGGGGGTCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IQGSDKGYDGDTPGP*KCQGAAVGWPGGPN Trigger: GTTCGGACCCCCAGGCCAGCCCACTGCTGCTCCTTGGCACTTTCACGGCCCTGGCGTGTCCCCGTCATAGCCCTTATCACTCCCTTGTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498688.5 |
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| CDS-3UTR CAA 90 bp | GGCGGAGAGATCTCTGGGAAGCCGAAGTCAGGGCCTGGGCCTCTGACCCCTGCCCTCTCGCTGACCGCATaGTACTTAATGGCGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGEISGKPKSGPGPLTPALSLTA*YLMASS Trigger: TGAGCTCGCCATTAAGTACAATGCGGTCAGCGAGAG...GGCAGGGGTCAGAGGCCCAGGCCCTGACTTCGGCTTCCCAGAGATCTCTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS GCA 72 bp | CGGCTGCGCTGCAGCTCCCCCTCAAGCGAGCGCCGCTaGAGCTCCAGCTTGACAGTGCGGCTCTCGGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLRCSSPSSERR*SSSLTVRLSEA Trigger: CGCCTCCGAGAGCCGCACTGTCAAGCTGGAGCTGCAGCGGCGCTCGCTTGAGGGGGAGCTGCAGCGCAGCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375541.10 ENST00000465021.5 |
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| CDS CCA 72 bp | CATGGCCCGCTGGGTCACTGGAAGGCTCAGGGCTCCTaGGGGAGGGGGTTATGGGCCCTGGGCTGGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HGPLGHWKAQGS*GRGLWALGWLG Trigger: GCCCAGCCAGCCCAGGGCCCATAACCCCCTCCCCCAGGAGCCCTGAGCCTTCCAGTGACCCAGCGGGCCATG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465291.1 |
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| CDS TCA 72 bp | GCTCCCCCTCAAGCGAGCGCCGCTGCAGCTCCAGCTTaGCAGTGCGGCTCTCGGAGGCGTCCAGAACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: APPQASAAAAPA*QCGSRRRPEPP Trigger: AGGAGGTTCTGGACGCCTCCGAGAGCCGCACTGTCAAGCTGGAGCTGCAGCGGCGCTCGCTTGAGGGGGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375541.10 ENST00000465021.5 |
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| CDS GCA 72 bp | CCGCTCGTCTTGCAGCTTCTGGACGGTGTTCAGGGCTaGAGCCTCACCCTCCTGCCGCTGCCGCAGCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLVLQLLDGVQG*SLTLLPLPQHL Trigger: CAGGTGCTGCGGCAGCGGCAGGAGGGTGAGGCTGCAGCCCTGAACACCGTCCAGAAGCTGCAAGACGAGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465021.5 |
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| CDS CAA 72 bp | AGCTCCCCCTCAAGCGAGCGCCGCTGCAGCTCCAGCTaGACAGTGCGGCTCTCGGAGGCGTCCAGAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSSERRCSSS*TVRLSEASRTS Trigger: GGAGGTTCTGGACGCCTCCGAGAGCCGCACTGTCAAGCTGGAGCTGCAGCGGCGCTCGCTTGAGGGGGAGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375541.10 ENST00000465021.5 |
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| CDS CCA 72 bp | ACACGCCAGGGCCGTGAAAGTGCCAAGGAGCAGCAGTaGGCTGGCCTGGGGGTCCGAACATGGTCCCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TRQGRESAKEQQ*AGLGVRTWSPV Trigger: GACTGGGGACCATGTTCGGACCCCCAGGCCAGCCCACTGCTGCTCCTTGGCACTTTCACGGCCCTGGCGTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498688.5 |
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| CDS CAA 72 bp | TGGGACCCAGGGCTGCATTCTAAGGTGCTGGGGCTGTaGAGCCCTTCCCCGCTTCCTTCTGCGGGTGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WDPGLHSKVLGL*SPSPLPSAGAS Trigger: GGACGCACCCGCAGAAGGAAGCGGGGAAGGGCTCAACAGCCCCAGCACCTTAGAATGCAGCCCTGGGTCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375541.10 |
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| CDS TCA 72 bp | AGTGATAAGGGCTATGACGGGGACACGCCAGGGCCGTaGAAGTGCCAAGGAGCAGCAGTGGGCTGGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SDKGYDGDTPGP*KCQGAAVGWPG Trigger: CCCAGGCCAGCCCACTGCTGCTCCTTGGCACTTTCACGGCCCTGGCGTGTCCCCGTCATAGCCCTTATCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498688.5 |
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| CDS CAA 72 bp | CTCTCTGCCTTCTTCACAGCAGACCGAAGCTCCTCATaGGAACGCCGCAGGGCCTCGCGCTCCTTGGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LSAFFTADRSSS*ERRRASRSLAP Trigger: GGGTGCCAAGGAGCGCGAGGCCCTGCGGCGTTCCAATGAGGAGCTTCGGTCTGCTGTGAAGAAGGCAGAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375541.10 ENST00000445545.6 |
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| CDS TCA 72 bp | CTGGGCTGGCTGGGCCATCAGCTCCACTGGAATTGCTaGGCACTCATACTAGGGATGAAGTTGGGGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGWLGHQLHWNC*ALILGMKLGSR Trigger: CCGGGACCCCAACTTCATCCCTAGTATGAGTGCTCAGCAATTCCAGTGGAGCTGATGGCCCAGCCAGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465291.1 |
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| CDS CAA 72 bp | TCTTGGCTGTGCTCTGTGTCCCTCTCGCTGACCGCATaGTACTTAATGGCGAGCTCATCGCGCTCGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SWLCSVSLSLTA*YLMASSSRSAR Trigger: CCGTGCCGAGCGCGATGAGCTCGCCATTAAGTACAATGCGGTCAGCGAGAGGGACACAGAGCACAGCCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445545.6 |
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| CDS TCA 72 bp | GGAGGATCGCTTGAGTCTGGGAGTTCCAGGTTACAGTaGGCTGTGATGGACCAATTGTGCCCCAGCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGSLESGSSRLQ*AVMDQLCPSLL Trigger: GAGCAGGCTGGGGCACAATTGGTCCATCACAGCTCACTGTAACCTGGAACTCCCAGACTCAAGCGATCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466256.6 |
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| CDS GCA 72 bp | CTCATAGAGCTCACTAACCCGCCACAGCACCCTGACTaGAGAGTCTTTCTTTCTACCCATCTTACAGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LIELTNPPQHPD*RVFLSTHLTDE Trigger: CTCATCTGTAAGATGGGTAGAAAGAAAGACTCTGCAGTCAGGGTGCTGTGGCGGGTTAGTGAGCTCTATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494191.6 |
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