RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRNKL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101343

Ensembl transcript IDs: ENST00000377327.8, ENST00000377340.6, ENST00000490910.5, ENST00000496549.5, ENST00000536226.2

Found 573 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCTTGCTCCTCAGGCTGCCACTCCATCCAGCGCTCAAACACCTaGCGGGCACCGGCAACGTTTCCCAACATTTCCTCCATGTACGTG +
Preference number: 1 (lower is better)
Translates to: QACSSGCHSIQRSNT*RAPATFPNISSMYV
Trigger: CACGTACATGGAGGAAATGTTGGGAAACGTTGCCGGTGCCCGGCAGGTGTTTGAGCGCTGGATGGAGTGGCAGCCTGAGGAGCAAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 90 bp AAATGGTGCGGGCCCGATCCACCTCTTTGTATCTCAGCTCAAAGTTaGTGTAGGAGTGCCAGGCTTGCTCCTCAGGCTGCCACTCCATCC +
Preference number: 1 (lower is better)
Translates to: KWCGPDPPLCISAQS*CRSARLAPQAATPS
Trigger: GGATGGAGTGGCAGCCTGAGGAGCAAGCCTGGCACTCCTACATCAACTTTGAGCTGAGATACAAAGAGGTGGATCGGGCCCGCACCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CCA 90 bp AGCGCTTCCAGTGCCTCTTCTCCTGAATGGGTGGGACATTGGCAATaGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGCGTCAC +
Preference number: 1 (lower is better)
Translates to: SASSASSPEWVGHWQ*PFHRLLSRLQLLRH
Trigger: GTGACGCAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCACCCATTCAGGAGAAGAGGCACTGGAAGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR GCA 90 bp TCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTTTCCTaGTGCTGTTTCTTCCACAGTTTGGCCATGGCCAGGAGTTTGAGG +
Preference number: 1 (lower is better)
Translates to: SSTSSSGWCSASSFS*CCFFHSLAMARSLR
Trigger: CCTCAAACTCCTGGCCATGGCCAAACTGTGGAAGAAACAGCAGCAGGAAAAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 90 bp GAGGCAGCGTTGTTATGGCCCGGTCCCAGATATTTCGAGCATGGTTaGCTTGGCGATTCTTCATTTCCATTTCTGCGTATTTCAGCCAGA +
Preference number: 1 (lower is better)
Translates to: EAALLWPGPRYFEHG*LGDSSFPFLRISAR
Trigger: TCTGGCTGAAATACGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGAAATATCTGGGACCGGGCCATAACAACGCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CCA 90 bp ACTCGAGGCAGCGTTGTTATGGCCCGGTCCCAGATATTTCGAGCATaGTTGACTTGGCGATTCTTCATTTCCATTTCTGCGTATTTCAGC +
Preference number: 1 (lower is better)
Translates to: TRGSVVMARSQIFRA*LTWRFFISISAYFS
Trigger: GCTGAAATACGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGAAATATCTGGGACCGGGCCATAACAACGCTGCCTCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CCA 90 bp AGCGTTGTTATGGCCCGGTCCCAGATATTTCGAGCATGGTTGACTTaGCGATTCTTCATTTCCATTTCTGCGTATTTCAGCCAGAGTGTA +
Preference number: 1 (lower is better)
Translates to: SVVMARSQIFRAWLT*RFFISISAYFSQSV
Trigger: TACACTCTGGCTGAAATACGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGAAATATCTGGGACCGGGCCATAACAACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR GCA 90 bp ATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTaGGTCACTTTCTACCAAGCGCAAGTAATCAAACCATGCATCATA +
Preference number: 1 (lower is better)
Translates to: IGNGPFIDFSHGFSF*VTFYQAQVIKPCII
Trigger: TATGATGCATGGTTTGATTACTTGCGCTTGGTAGAAAGTGACGCAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 90 bp TCCTCTCAGGATCCTTTGCCTCCAATTCTTCATAGAGTGCATAGTTaGTCCAAAGATAAATGTAGCGCTTCCAGTGCCTCTTCTCCTGAA +
Preference number: 1 (lower is better)
Translates to: SSQDPLPPILHRVHS*SKDKCSASSASSPE
Trigger: TTCAGGAGAAGAGGCACTGGAAGCGCTACATTTATCTTTGGATCAACTATGCACTCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR GCA 90 bp CTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTCTTCATAGAGTaGATAGTTGATCCAAAGATAAATGTAGCGCTTCCAGTGCCTCTT +
Preference number: 1 (lower is better)
Translates to: LSCPLRILCLQFFIE*IVDPKINVALPVPL
Trigger: AAGAGGCACTGGAAGCGCTACATTTATCTTTGGATCAACTATGCACTCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGGACAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 90 bp TCGCCTTCACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATaGTATCTTCAATACCCCGCCTATCACCAAACTTCTTCTCAAAGA +
Preference number: 1 (lower is better)
Translates to: SPSLLLRTGISVCSQ*YLQYPAYHQTSSQR
Trigger: TCTTTGAGAAGAAGTTTGGTGATAGGCGGGGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTGAAGGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 90 bp TATATGATTTCCAAAGCACCTCTGGCATGTCTAAACGTGGCTGACTaGTGGCTAATTCATAGATTGCCCGTGCTCTGTCAATATCACCAA +
Preference number: 1 (lower is better)
Translates to: YMISKAPLACLNVAD*WLIHRLPVLCQYHQ
Trigger: TTGGTGATATTGACAGAGCACGGGCAATCTATGAATTAGCCATCAGTCAGCCACGTTTAGACATGCCAGAGGTGCTTTGGAAATCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR GCA 90 bp TTCAGCTTCTGCGTCACTTTCTACCAAGCGCAAGTAATCAAACCATaGATCATAATTGTGTGGATTCGCCTTCACTTCTTCTTCGTACTG +
Preference number: 1 (lower is better)
Translates to: FSFCVTFYQAQVIKP*IIIVWIRLHFFFVL
Trigger: CAGTACGAAGAAGAAGTGAAGGCGAATCCACACAATTATGATGCATGGTTTGATTACTTGCGCTTGGTAGAAAGTGACGCAGAAGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 90 bp AAACTCTCAGATCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTaGGCAACGTATCAGCAAATACATTCATTCTTGTGCTACTCTTCA +
Preference number: 1 (lower is better)
Translates to: KLSDRLMQLNFCLRM*ATYQQIHSFLCYSS
Trigger: TGAAGAGTAGCACAAGAATGAATGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGATCTGAGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR CAA 90 bp TGGTGCTCAGCATCCTCCTTTTCCTGCTGCTGTTTCTTCCACAGTTaGGCCATGGCCAGGAGTTTGAGGTTAGGTTGGTTGGCAGCATCT +
Preference number: 2 (lower is better)
Translates to: WCSASSFSCCCFFHS*AMARSLRLGWLAAS
Trigger: AGATGCTGCCAACCAACCTAACCTCAAACTCCTGGCCATGGCCAAACTGTGGAAGAAACAGCAGCAGGAAAAGGAGGATGCTGAGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTATCGCTCATAAATGGTaGGGGCCCGATCCACCTCTT +
Preference number: 2 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLIAHKW*GPDPPL
Trigger: AAGAGGTGGATCGGGCCCGCACCATTTATGAGCGAT...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CAA 90 bp CGAGGCAGCGTTGTTATGGCCCGGTCCCAGATATTTCGAGCATGGTaGACTTGGCGATTCTTCATTTCCATTTCTGCGTATTTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: RGSVVMARSQIFRAW*TWRFFISISAYFSQ
Trigger: CTGGCTGAAATACGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGAAATATCTGGGACCGGGCCATAACAACGCTGCCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTAAGATGATGTTCTCCTaGTCACTCACTAGGCAGACC +
Preference number: 2 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLKMMFS*SLTRQT
Trigger: GGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTCAAACTCAACCACTCTaGAGAACTGATGAGCGCCTA +
Preference number: 2 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLQTQPL*RTDERL
Trigger: TAGGCGCTCATCAGTTCTCCAGAGTGGTTGAGTTTG...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCATCTCAGCTCAAAGTTaGTGTAGGAGTGCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLISAQS*CRSARL
Trigger: AAGCCTGGCACTCCTACATCAACTTTGAGCTGAGAT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCCATGAGTGGCAGAGCTaGGAAATGAACTCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLHEWQS*EMNSSL
Trigger: CAGACTTGAGTTCATTTCCCAGCTCTGCCACTCATG...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCACGTCCTCATCTGGATaGTGCTCAGCATCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVITSSSG*CSASSF
Trigger: AAAGGAGGATGCTGAGCACCATCCAGATGAGGACGT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CAA 90 bp CAGCGTTGTTATGGCCCGGTCCCAGATATTTCGAGCATGGTTGACTaGGCGATTCTTCATTTCCATTTCTGCGTATTTCAGCCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: QRCYGPVPDISSMVD*AILHFHFCVFQPEC
Trigger: ACACTCTGGCTGAAATACGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGAAATATCTGGGACCGGGCCATAACAACGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCATGGATCGAGCCCTTTaGATCTCCTTTAGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLMDRAL*ISFRLS
Trigger: AGAAAGCCTAAAGGAGATTCAAAGGGCTCGATCCAT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAAGCTTGCTCCTCAGGCTaGCACTCCATCCAGCGCTCA +
Preference number: 2 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQACSSG*HSIQRS
Trigger: TGAGCGCTGGATGGAGTGGCAGCCTGAGGAGCAAGC...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCGAAGACAACTCAAACTaGGCAAAGCTGATCCATACC +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIEDNSN*AKLIHT
Trigger: GGTATGGATCAGCTTTGCTCAGTTTGAGTTGTCTTC...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATGCTTGCTCCTCAGGCTaGCACTCCATCCAGCGCTCA +
Preference number: 2 (lower is better)
Translates to: SVNAVEFLLENVSNVSANACSSG*HSIQRS
Trigger: TGAGCGCTGGATGGAGTGGCAGCCTGAGGAGCAAGC...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCATCGCTCATAAATGGTaGGGGCCCGATCCACCTCTT +
Preference number: 2 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVIAHKW*GPDPPL
Trigger: AAGAGGTGGATCGGGCCCGCACCATTTATGAGCGAT...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTTTCTTAACATCAGGGTaGACGAGGACAAATCGCTCA +
Preference number: 2 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPIFLTSG*TRTNRS
Trigger: TGAGCGATTTGTCCTCGTGCACCCTGATGTTAAGAA...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTTGTTCTTTGGACATTTaGCTATGGAAGTTCCCAATG +
Preference number: 2 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLCSLDI*LWKFPM
Trigger: CATTGGGAACTTCCATAGGCAAATGTCCAAAGAACA...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCAAACTCAACCACTCTaGAGAACTGATGAGCGCCTA +
Preference number: 2 (lower is better)
Translates to: AVADARPVTKAVRLKTDFQTQPL*RTDERL
Trigger: TAGGCGCTCATCAGTTCTCCAGAGTGGTTGAGTTTG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCCGAGCATGGTTGACTTaGCGATTCTTCATTTCCATT +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLRAWLT*RFFISI
Trigger: AATGGAAATGAAGAATCGCCAAGTCAACCATGCTCG...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTCTTCTTGACTTTCTCTaGCATGAGTTTGTCTACTCT +
Preference number: 2 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLLLDFL*HEFVYS
Trigger: AGAGTAGACAAACTCATGCCAGAGAAAGTCAAGAAG...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCAGTTTGAGGTTAGGTTaGTTGGCAGCATCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVISLRLG*LAASSG
Trigger: TCCAGAAGATGCTGCCAACCAACCTAACCTCAAACT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGTTCATAGCACACACGTaGACAAGCCATTATTCTTTA +
Preference number: 2 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLFIAHT*TSHYSL
Trigger: TAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAA...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCCAAAGGCTATTAAGATaGTGTTCTCCTGCTCACTCA +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIQRLLR*CSPAHS
Trigger: TGAGTGAGCAGGAGAACATCATCTTAATAGCCTTTG...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCAGGGTGGGAGAGAAATaGATCTTTATGTTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIRVGEK*IFMFSC
Trigger: ACAGGAGAACATAAAGATTCATTTCTCTCCCACCCT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCTCTGTGATCTTCTGTTaGGGTGGAGGTGGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVSVIFC*GGGGRS
Trigger: GCTTCTTCCACCTCCACCTCAACAGAAGATCACAGA...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTATTTCGAGCATGGTTaGCTTGGCGATTCTTCATTT +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLYFEHG*LGDSSF
Trigger: AAATGAAGAATCGCCAAGTCAACCATGCTCGAAATA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCACTTCCTTCTTTTCCTaGAGACAACTCAAACTGAGC +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVITSFFS*RQLKLS
Trigger: GCTCAGTTTGAGTTGTCTTCAGGAAAAGAAGGAAGT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCAGCGCTCAAACACCTaGCGGGCACCGGCAACGTTT +
Preference number: 2 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKQRSNT*RAPATF
Trigger: AAACGTTGCCGGTGCCCGGCAGGTGTTTGAGCGCTG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCCTCTCAGGATCCTTTaGCTCCAATTCTTCATAGAG +
Preference number: 2 (lower is better)
Translates to: AVADARPVTKAVRLKTDFPLRIL*LQFFIE
Trigger: CTCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTAAGTTTGGACTCAGTTaGAAAAACAAATCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLKFGLS*KNKSSS
Trigger: ACTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTT...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTTTCCAGCTTTCACACTaGCACATGCTTATTACAATT +
Preference number: 2 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLFQLSH*HMLITI
Trigger: AATTGTAATAAGCATGTGCCAGTGTGAAAGCTGGAA...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTCAGATATTTCGAGCATaGTTGACTTGGCGATTCTTC +
Preference number: 2 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPIQIFRA*LTWRFF
Trigger: GAAGAATCGCCAAGTCAACCATGCTCGAAATATCTG...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCGAGGCAGCGTTGTTATaGCCCGGTCCCAGATATTTC +
Preference number: 2 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTEAALL*PGPRYF
Trigger: GAAATATCTGGGACCGGGCCATAACAACGCTGCCTC...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTACTTCTTCTTCGTACTaGAATCTCCGTTTGCTCACA +
Preference number: 2 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPITSSSY*NLRLLT
Trigger: TGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGT...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTTCCCAATGCTCTTCTaGCTAATGACAGATTCTTCT +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLFPMLF*LMTDSS
Trigger: AGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CAA 90 bp TTGTGTGGATTCGCCTTCACTTCTTCTTCGTACTGGAATCTCCGTTaGCTCACAATGATATCTTCAATACCCCGCCTATCACCAAACTTC +
Preference number: 2 (lower is better)
Translates to: LCGFAFTSSSYWNLR*LTMISSIPRLSPNF
Trigger: GAAGTTTGGTGATAGGCGGGGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTGAAGGCGAATCCACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CAA 90 bp CTGTTTCTTCCACAGTTTGGCCATGGCCAGGAGTTTGAGGTTAGGTaGGTTGGCAGCATCTTCTGGAAAGATGTAATCAAAGTATTCTTC +
Preference number: 2 (lower is better)
Translates to: LFLPQFGHGQEFEVR*VGSIFWKDVIKVFF
Trigger: GAAGAATACTTTGATTACATCTTTCCAGAAGATGCTGCCAACCAACCTAACCTCAAACTCCTGGCCATGGCCAAACTGTGGAAGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTTTTGCTTGAGAATGTaGGCAACGTATCAGCAAATA +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLFCLRM*ATYQQI
Trigger: TATTTGCTGATACGTTGCTCACATTCTCAAGCAAAA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCCTAAAGCAGTCAGGCTaGAAACAGATTTTATCTCAA +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLLKQSG*KQILSQ
Trigger: TTGAGATAAAATCTGTTTTCAGCCTGACTGCTTTAG...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCAGTTCCAAAGAGGCTTaGTACACCTGTCTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVSSKEA*YTCLVL
Trigger: GAGGACAAGACAGGTGTATCAAGCCTCTTTGGAACT...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCAGGTGTTTCTACACATaGTCTAAACCAAGAGTAAGT +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLRCFYT*SKPRVS
Trigger: ACTTACTCTTGGTTTAGAGCATGTGTAGAAACACCT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCAAGTTTGGACTCAGTTaGAAAAACAAATCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLKFGLS*KNKSSS
Trigger: ACTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCATGAGTGGCAGAGCTaGGAAATGAACTCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVHEWQS*EMNSSL
Trigger: CAGACTTGAGTTCATTTCCCAGCTCTGCCACTCATG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTACAGTTCTAGTCCTTaGGCAGTGAACAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLYSSSP*AVNKEK
Trigger: TTTTTCTTTGTTCACTGCCCAAGGACTAGAACTGTA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCGATCTTCTGTTGAGGTaGAGGTGGAAGAAGCTCAAG +
Preference number: 2 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVDLLLR*RWKKLK
Trigger: CTTGAGCTTCTTCCACCTCCACCTCAACAGAAGATC...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAACAAATCGCTCATAAATaGTGCGGGCCCGATCCACCT +
Preference number: 2 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQQIAHK*CGPDPP
Trigger: AGGTGGATCGGGCCCGCACCATTTATGAGCGATTTG...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCACATTTCCTAATGCATaGTGTGGACAGACATTAGAA +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVITFPNA*CGQTLE
Trigger: TTCTAATGTCTGTCCACATCATGCATTAGGAAATGT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTTCATAGCACACACGTaGACAAGCCATTATTCTTTA +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIFIAHT*TSHYSL
Trigger: TAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCATTCTAGGAAGACTGTaGTTAAGTCACTTGCATTCT +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIILGRL*LSHLHS
Trigger: AGAATGCAAGTGACTTAATCACAGTCTTCCTAGAAT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCTACTTGTACCAGAACTaGTTAACTCGAGGCAGCGTT +
Preference number: 2 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVYLYQN*LTRGSV
Trigger: AACGCTGCCTCGAGTTAATCAGTTCTGGTACAAGTA...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCCATGAGTGGCAGAGCTaGGAAATGAACTCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTHEWQS*EMNSSL
Trigger: CAGACTTGAGTTCATTTCCCAGCTCTGCCACTCATG...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTGGCAACATTGCTACTaGAGATACATAATGTACAGA +
Preference number: 2 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIWQHCY*RYIMYR
Trigger: TCTGTACATTATGTATCTCCAGTAGCAATGTTGCCA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTCTACTATAGCACACTaGGAGATGTTTACTGGTACT +
Preference number: 2 (lower is better)
Translates to: AVADARPVTKAVRLKTDFSTIAH*EMFTGT
Trigger: AGTACCAGTAAACATCTCCCAGTGTGCTATAGTAGA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCAAGCACGCTCGTATATaGATCGAGCCCTTTGAATCT +
Preference number: 2 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVKHARI*IEPFES
Trigger: AGATTCAAAGGGCTCGATCCATATACGAGCGTGCTT...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGCAAATCGCTCATAAATaGTGCGGGCCCGATCCACCT +
Preference number: 2 (lower is better)
Translates to: FLKSSWASCFEILSRAYLQIAHK*CGPDPP
Trigger: AGGTGGATCGGGCCCGCACCATTTATGAGCGATTTG...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTTTTGCTTGAGAATGTaGGCAACGTATCAGCAAATA +
Preference number: 2 (lower is better)
Translates to: AVADARPVTKAVRLKTDFFCLRM*ATYQQI
Trigger: TATTTGCTGATACGTTGCTCACATTCTCAAGCAAAA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACCTCTACTCGAGAAGTaGTCTGACACCGCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQPLLEK*SDTAVA
Trigger: AGCTACTGCGGTGTCAGATCACTTCTCGAGTAGAGG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTCTGTGATCTTCTGTTaGGGTGGAGGTGGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: SVNAVEFLLENVSNVSANSVIFC*GGGGRS
Trigger: GCTTCTTCCACCTCCACCTCAACAGAAGATCACAGA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTAGGTGTTTCTACACATaGTCTAAACCAAGAGTAAGT +
Preference number: 2 (lower is better)
Translates to: AVADARPVTKAVRLKTDFRCFYT*SKPRVS
Trigger: ACTTACTCTTGGTTTAGAGCATGTGTAGAAACACCT...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTGCTTTCTTCCCATTGTaGGTATTTTATCCAGTTACT +
Preference number: 2 (lower is better)
Translates to: AVADARPVTKAVRLKTDFAFFPL*VFYPVT
Trigger: AGTAACTGGATAAAATACGCACAATGGGAAGAAAGC...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAACATGAGTGGCAGAGCTaGGAAATGAACTCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQHEWQS*EMNSSL
Trigger: CAGACTTGAGTTCATTTCCCAGCTCTGCCACTCATG...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAAGATCTTCTGTTGAGGTaGAGGTGGAAGAAGCTCAAG +
Preference number: 2 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQDLLLR*RWKKLK
Trigger: CTTGAGCTTCTTCCACCTCCACCTCAACAGAAGATC...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCGAGGCAGCGTTGTTATaGCCCGGTCCCAGATATTTC +
Preference number: 2 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIEAALL*PGPRYF
Trigger: GAAATATCTGGGACCGGGCCATAACAACGCTGCCTC...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAAAAGCACGCTCGTATATaGATCGAGCCCTTTGAATCT +
Preference number: 2 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQKHARI*IEPFES
Trigger: AGATTCAAAGGGCTCGATCCATATACGAGCGTGCTT...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCTTCATAGCACACACGTaGACAAGCCATTATTCTTTA +
Preference number: 2 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVFIAHT*TSHYSL
Trigger: TAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAA...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCTTTTGCTTGAGAATGTaGGCAACGTATCAGCAAATA +
Preference number: 2 (lower is better)
Translates to: ARALSISPRIVSNSANLIFCLRM*ATYQQI
Trigger: TATTTGCTGATACGTTGCTCACATTCTCAAGCAAAA...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGATGGATCGAGCCCTTTaGATCTCCTTTAGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: FLKSSWASCFEILSRAYLMDRAL*ISFRLS
Trigger: AGAAAGCCTAAAGGAGATTCAAAGGGCTCGATCCAT...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAATCTCAGCTCAAAGTTaGTGTAGGAGTGCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQISAQS*CRSARL
Trigger: AAGCCTGGCACTCCTACATCAACTTTGAGCTGAGAT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACATCCGTTTGCTCACAATaGTATCTTCAATACCCCGCC +
Preference number: 2 (lower is better)
Translates to: VNAVEFLLENVSNVSANTSVCSQ*YLQYPA
Trigger: GGCGGGGTATTGAAGATATCATTGTGAGCAAACGGA...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAAGTTCCAAAGAGGCTTaGTACACCTGTCTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQSSKEA*YTCLVL
Trigger: GAGGACAAGACAGGTGTATCAAGCCTCTTTGGAACT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTTCTTAACATCAGGGTaGACGAGGACAAATCGCTCA +
Preference number: 2 (lower is better)
Translates to: SVNAVEFLLENVSNVSANFLTSG*TRTNRS
Trigger: TGAGCGATTTGTCCTCGTGCACCCTGATGTTAAGAA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCAAGTTTGGACTCAGTTaGAAAAACAAATCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVKFGLS*KNKSSS
Trigger: ACTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTT...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACATGAGTGGCAGAGCTaGGAAATGAACTCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQHEWQS*EMNSSL
Trigger: CAGACTTGAGTTCATTTCCCAGCTCTGCCACTCATG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACAAACTCAACCACTCTaGAGAACTGATGAGCGCCTA +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQQTQPL*RTDERL
Trigger: TAGGCGCTCATCAGTTCTCCAGAGTGGTTGAGTTTG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGAATGGGTGGGACATTaGCAATGGCCCTTTCATAGA +
Preference number: 2 (lower is better)
Translates to: VNAVEFLLENVSNVSANTEWVGH*QWPFHR
Trigger: TCTATGAAAGGGCCATTGCCAATGTCCCACCCATTC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATACTTGTACCAGAACTaGTTAACTCGAGGCAGCGTT +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQYLYQN*LTRGSV
Trigger: AACGCTGCCTCGAGTTAATCAGTTCTGGTACAAGTA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCGCTTTCTTCCCATTGTaGGTATTTTATCCAGTTACT +
Preference number: 2 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTAFFPL*VFYPVT
Trigger: AGTAACTGGATAAAATACGCACAATGGGAAGAAAGC...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAACTTCATTTCCATTTCTaGGTATTTCAGCCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQLHFHF*VFQPEC
Trigger: ACACTCTGGCTGAAATACGCAGAAATGGAAATGAAG...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACCTCTCAGGATCCTTTaGCTCCAATTCTTCATAGAG +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQPLRIL*LQFFIE
Trigger: CTCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCGAGCATGGTTGACTTaGCGATTCTTCATTTCCATT +
Preference number: 2 (lower is better)
Translates to: SVNAVEFLLENVSNVSANRAWLT*RFFISI
Trigger: AATGGAAATGAAGAATCGCCAAGTCAACCATGCTCG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGAGGGTGGGAGAGAAATaGATCTTTATGTTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKRVGEK*IFMFSC
Trigger: ACAGGAGAACATAAAGATTCATTTCTCTCCCACCCT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR GCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACTCATACACTTTCCGTaGATGGGCAAAATAAGCATG +
Preference number: 2 (lower is better)
Translates to: VNAVEFLLENVSNVSANTLIHFP*MGKISM
Trigger: CATGCTTATTTTGCCCATGCACGGAAAGTGTATGAG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGACTTCTTCTTCGTACTaGAATCTCCGTTTGCTCACA +
Preference number: 2 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKTSSSY*NLRLLT
Trigger: TGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGAACAAACAATTTACTaGGCACTTACTATGCACCCA +
Preference number: 2 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKEQTIY*ALTMHP
Trigger: TGGGTGCATAGTAAGTGCTCAGTAAATTGTTTGTTC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTTCATAGCACACACGTaGACAAGCCATTATTCTTTA +
Preference number: 2 (lower is better)
Translates to: SVNAVEFLLENVSNVSANFIAHT*TSHYSL
Trigger: TAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTATTTCGAGCATGGTTaGCTTGGCGATTCTTCATTT +
Preference number: 2 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIYFEHG*LGDSSF
Trigger: AAATGAAGAATCGCCAAGTCAACCATGCTCGAAATA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR GCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACTTCATTTCCATTTCTaGGTATTTCAGCCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: VNAVEFLLENVSNVSANTLHFHF*VFQPEC
Trigger: ACACTCTGGCTGAAATACGCAGAAATGGAAATGAAG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATAAGTTTGGACTCAGTTaGAAAAACAAATCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SVNAVEFLLENVSNVSANKFGLS*KNKSSS
Trigger: ACTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAACATTTCCTAATGCATaGTGTGGACAGACATTAGAA +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQTFPNA*CGQTLE
Trigger: TTCTAATGTCTGTCCACATCATGCATTAGGAAATGT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAACATTTCCTAATGCATaGTGTGGACAGACATTAGAA +
Preference number: 2 (lower is better)
Translates to: VNAVEFLLENVSNVSANTTFPNA*CGQTLE
Trigger: TTCTAATGTCTGTCCACATCATGCATTAGGAAATGT...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGACATTTCCTAATGCATaGTGTGGACAGACATTAGAA +
Preference number: 2 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKTFPNA*CGQTLE
Trigger: TTCTAATGTCTGTCCACATCATGCATTAGGAAATGT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTTTTGCTTGAGAATGTaGGCAACGTATCAGCAAATA +
Preference number: 2 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKFCLRM*ATYQQI
Trigger: TATTTGCTGATACGTTGCTCACATTCTCAAGCAAAA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR GCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAAGGTGTTTCTACACATaGTCTAAACCAAGAGTAAGT +
Preference number: 2 (lower is better)
Translates to: VNAVEFLLENVSNVSANTRCFYT*SKPRVS
Trigger: ACTTACTCTTGGTTTAGAGCATGTGTAGAAACACCT...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAAAGTTTGGACTCAGTTaGAAAAACAAATCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: VNAVEFLLENVSNVSANTKFGLS*KNKSSS
Trigger: ACTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTT...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTGGCAACATTGCTACTaGAGATACATAATGTACAGA +
Preference number: 2 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKWQHCY*RYIMYR
Trigger: TCTGTACATTATGTATCTCCAGTAGCAATGTTGCCA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATACAGTTCTAGTCCTTaGGCAGTGAACAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQYSSSP*AVNKEK
Trigger: TTTTTCTTTGTTCACTGCCCAAGGACTAGAACTGTA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTTCCAGCTTTCACACTaGCACATGCTTATTACAATT +
Preference number: 2 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKFQLSH*HMLITI
Trigger: AATTGTAATAAGCATGTGCCAGTGTGAAAGCTGGAA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR GCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATTTCACACTGGCACATaGTTATTACAATTCTACCTT +
Preference number: 2 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQFHTGT*LLQFYL
Trigger: AAGGTAGAATTGTAATAAGCATGTGCCAGTGTGAAA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR GCA 72 bp TCCTCAGGCTGCCACTCCATCCAGCGCTCAAACACCTaGCGGGCACCGGCAACGTTTCCCAACATTTCCTCC +
Preference number: 3 (lower is better)
Translates to: SSGCHSIQRSNT*RAPATFPNISS
Trigger: GGAGGAAATGTTGGGAAACGTTGCCGGTGCCCGGCAGGTGTTTGAGCGCTGGATGGAGTGGCAGCCTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 72 bp GGGCCCGATCCACCTCTTTGTATCTCAGCTCAAAGTTaGTGTAGGAGTGCCAGGCTTGCTCCTCAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: GPDPPLCISAQS*CRSARLAPQAA
Trigger: GGCAGCCTGAGGAGCAAGCCTGGCACTCCTACATCAACTTTGAGCTGAGATACAAAGAGGTGGATCGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 72 bp CCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTaGTCTGACACCGCAGTAGCTGATGCTCGTCCAGTG +
Preference number: 3 (lower is better)
Translates to: PAHSLGRPLLEK*SDTAVADARPV
Trigger: CACTGGACGAGCATCAGCTACTGCGGTGTCAGATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR GCA 72 bp CATCAGGGTGCACGAGGACAAATCGCTCATAAATGGTaGGGGCCCGATCCACCTCTTTGTATCTCAGCTCAA +
Preference number: 3 (lower is better)
Translates to: HQGARGQIAHKW*GPDPPLCISAQ
Trigger: TTGAGCTGAGATACAAAGAGGTGGATCGGGCCCGCACCATTTATGAGCGATTTGTCCTCGTGCACCCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR GCA 72 bp CTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTaGTCACTCACTAGGCAGACCTCTACTCGAGAAGTG +
Preference number: 3 (lower is better)
Translates to: LGEPKAIKMMFS*SLTRQTSTREV
Trigger: CACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR TCA 72 bp TCCAAAGCACCTCTGGCATGTCTAAACGTGGCTGACTaGTGGCTAATTCATAGATTGCCCGTGCTCTGTCAA +
Preference number: 3 (lower is better)
Translates to: SKAPLACLNVAD*WLIHRLPVLCQ
Trigger: TTGACAGAGCACGGGCAATCTATGAATTAGCCATCAGTCAGCCACGTTTAGACATGCCAGAGGTGCTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR GCA 72 bp GGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTaGGTCACTTTCTACCAAGCGCAAGTAATCAAACCA +
Preference number: 3 (lower is better)
Translates to: GPFIDFSHGFSF*VTFYQAQVIKP
Trigger: TGGTTTGATTACTTGCGCTTGGTAGAAAGTGACGCAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CCA 72 bp AGCGTTGTTATGGCCCGGTCCCAGATATTTCGAGCATaGTTGACTTGGCGATTCTTCATTTCCATTTCTGCG +
Preference number: 3 (lower is better)
Translates to: SVVMARSQIFRA*LTWRFFISISA
Trigger: CGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGAAATATCTGGGACCGGGCCATAACAACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CCA 72 bp GATAAATGTAGCGCTTCCAGTGCCTCTTCTCCTGAATaGGTGGGACATTGGCAATGGCCCTTTCATAGACTT +
Preference number: 3 (lower is better)
Translates to: DKCSASSASSPE*VGHWQWPFHRL
Trigger: AAGTCTATGAAAGGGCCATTGCCAATGTCCCACCCATTCAGGAGAAGAGGCACTGGAAGCGCTACATTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp AAGCGGGCATACTTGATCCAGTTCTTAACATCAGGGTGCACGAGGACAAATCGCTCGAGCATGGTTGACTaGGCGATTCTTCATTTCCAT +
Preference number: 3 (lower is better)
Translates to: KRAYLIQFLTSGCTRTNRSSMVD*AILHFH
Trigger: ATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGA...GCGATTTGTCCTCGTGCACCCTGATGTTAAGAACTGGATCAAGTATGCCCGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTGCCCGATCCACCTCTTaGTATCTCAGCTCAAAGTTG +
Preference number: 3 (lower is better)
Translates to: AVADARPVTKAVRLKTDFARSTS*YLSSKL
Trigger: CAACTTTGAGCTGAGATACAAAGAGGTGGATCGGGC...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGAAAGTTTGGACTCAGTaGGAAAAACAAATCCAGCAG +
Preference number: 3 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLKVWTQ*EKQIQQ
Trigger: CTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTTT...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTCTTGGGCATCTTGTTTaGAAATTCTGTCCAGGGCAT +
Preference number: 3 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPILGHLV*KFCPGH
Trigger: ATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAG...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTCCTCTCAGGATCCTTaGCCTCCAATTCTTCATAGA +
Preference number: 3 (lower is better)
Translates to: KMMFSCSLTRQTSTREVISSQDP*PPILHR
Trigger: TCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGGA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTTTGTTCTTTGGACATTaGCCTATGGAAGTTCCCAAT +
Preference number: 3 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLLFFGH*PMEVPN
Trigger: ATTGGGAACTTCCATAGGCAAATGTCCAAAGAACAA...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCAAAGTTTGGACTCAGTaGGAAAAACAAATCCAGCAG +
Preference number: 3 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLKVWTQ*EKQIQQ
Trigger: CTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTTT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCTTGGGCATCTTGTTTaGAAATTCTGTCCAGGGCAT +
Preference number: 3 (lower is better)
Translates to: AVADARPVTKAVRLKTDFLGHLV*KFCPGH
Trigger: ATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTCCTCTCAGGATCCTTaGCCTCCAATTCTTCATAGA +
Preference number: 3 (lower is better)
Translates to: AVADARPVTKAVRLKTDFSSQDP*PPILHR
Trigger: TCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGGA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCATATTTCGAGCATGGTaGACTTGGCGATTCTTCATT +
Preference number: 3 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIIFRAW*TWRFFI
Trigger: AATGAAGAATCGCCAAGTCAACCATGCTCGAAATAT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTTACTGGAATCTCCGTTaGCTCACAATGATATCTTCA +
Preference number: 3 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPIYWNLR*LTMISS
Trigger: TGAAGATATCATTGTGAGCAAACGGAGATTCCAGTA...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 72 bp TTGTTATGGCCCGGTCCCAGATATTTCGAGCATGGTTaGCTTGGCGATTCTTCATTTCCATTTCTGCGTATT +
Preference number: 3 (lower is better)
Translates to: LLWPGPRYFEHG*LGDSSFPFLRI
Trigger: AATACGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGAAATATCTGGGACCGGGCCATAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTAAAGTTTGGACTCAGTaGGAAAAACAAATCCAGCAG +
Preference number: 3 (lower is better)
Translates to: AVADARPVTKAVRLKTDFKVWTQ*EKQIQQ
Trigger: CTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTTT...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTACTGGAATCTCCGTTaGCTCACAATGATATCTTCA +
Preference number: 3 (lower is better)
Translates to: AVADARPVTKAVRLKTDFYWNLR*LTMISS
Trigger: TGAAGATATCATTGTGAGCAAACGGAGATTCCAGTA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 72 bp CTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATaGTATCTTCAATACCCCGCCTATCACCAAACTTCT +
Preference number: 3 (lower is better)
Translates to: LLLRTGISVCSQ*YLQYPAYHQTS
Trigger: AGAAGTTTGGTGATAGGCGGGGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 72 bp GATCCTTTGCCTCCAATTCTTCATAGAGTGCATAGTTaGTCCAAAGATAAATGTAGCGCTTCCAGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: DPLPPILHRVHS*SKDKCSASSAS
Trigger: AGAGGCACTGGAAGCGCTACATTTATCTTTGGATCAACTATGCACTCTATGAAGAATTGGAGGCAAAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR GCA 72 bp TGCGTCACTTTCTACCAAGCGCAAGTAATCAAACCATaGATCATAATTGTGTGGATTCGCCTTCACTTCTTC +
Preference number: 3 (lower is better)
Translates to: CVTFYQAQVIKP*IIIVWIRLHFF
Trigger: GAAGAAGTGAAGGCGAATCCACACAATTATGATGCATGGTTTGATTACTTGCGCTTGGTAGAAAGTGACGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR GCA 72 bp CCTCTCAGGATCCTTTGCCTCCAATTCTTCATAGAGTaGATAGTTGATCCAAAGATAAATGTAGCGCTTCCA +
Preference number: 3 (lower is better)
Translates to: PLRILCLQFFIE*IVDPKINVALP
Trigger: TGGAAGCGCTACATTTATCTTTGGATCAACTATGCACTCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGGCCCGATCCACCTCTTaGTATCTCAGCTCAAAGTTG +
Preference number: 3 (lower is better)
Translates to: FLKSSWASCFEILSRAYLARSTS*YLSSKL
Trigger: CAACTTTGAGCTGAGATACAAAGAGGTGGATCGGGC...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR GCA 72 bp AGCATGGTTGACTTGGCGATTCTTCATTTCCATTTCTaGGTATTTCAGCCAGAGTGTAATATTTCGGTAGTC +
Preference number: 3 (lower is better)
Translates to: SMVDLAILHFHF*VFQPECNISVV
Trigger: GACTACCGAAATATTACACTCTGGCTGAAATACGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCTCAAAGCGGGCATACTaGATCCAGTTCTTAACATCA +
Preference number: 3 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTSKRAY*IQFLTS
Trigger: TGATGTTAAGAACTGGATCAAGTATGCCCGCTTTGA...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGAGTTTGAGGTTAGGTaGGTTGGCAGCATCTTCTGG +
Preference number: 3 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKEFEVR*VGSIFW
Trigger: CCAGAAGATGCTGCCAACCAACCTAACCTCAAACTC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR TCA 72 bp TTTCTCTGGCATGAGTTTGTCTACTCTCTCCTTATCTaGAGCTGTTCCAAATTCTTCTTCAAAACTTCGCCA +
Preference number: 3 (lower is better)
Translates to: FLWHEFVYSLLI*SCSKFFFKTSP
Trigger: TGGCGAAGTTTTGAAGAAGAATTTGGAACAGCTTCAGATAAGGAGAGAGTAGACAAACTCATGCCAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATCGAGCATGGTTGACTaGGCGATTCTTCATTTCCAT +
Preference number: 3 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQSSMVD*AILHFH
Trigger: ATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATAAAGTTTGGACTCAGTaGGAAAAACAAATCCAGCAG +
Preference number: 3 (lower is better)
Translates to: SVNAVEFLLENVSNVSANKVWTQ*EKQIQQ
Trigger: CTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTTT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR TCA 72 bp GACTTAAGTCTTAGTCCAGAATTTCCCAAATTTATGTaGACATGGGACATCATTTTTCATAGCACACACGTG +
Preference number: 3 (lower is better)
Translates to: DLSLSPEFPKFM*TWDIIFHSTHV
Trigger: CACGTGTGTGCTATGAAAAATGATGTCCCATGTTCACATAAATTTGGGAAATTCTGGACTAAGACTTAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR TCA 72 bp GATCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTaGGCAACGTATCAGCAAATACATTCATTCTTGTGC +
Preference number: 3 (lower is better)
Translates to: DRLMQLNFCLRM*ATYQQIHSFLC
Trigger: GCACAAGAATGAATGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAATATTTCGAGCATGGTaGACTTGGCGATTCTTCATT +
Preference number: 3 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQIFRAW*TWRFFI
Trigger: AATGAAGAATCGCCAAGTCAACCATGCTCGAAATAT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR-3UTR CAA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGAATGCAGTTGAATTTTaGCTTGAGAATGTGAGCAAC +
Preference number: 3 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKNAVEF*LENVSN
Trigger: GTTGCTCACATTCTCAAGCAAAAATTCAACTGCATT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACAATATCACCAAGGATaGTCTCTAATTCAGCGAATT +
Preference number: 3 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQQYHQG*SLIQRI
Trigger: AATTCGCTGAATTAGAGACAATCCTTGGTGATATTG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGCCTTGCGGCAGCGCGTaGAGTGCGGCGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLPCGSA*SAASWS
Trigger: GCTCCAGGACGCCGCACTCCACGCGCTGCCGCAAGG...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCCGGCAGCGCGTGGAGTaGGGCGTCCTGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIRQRVE*GVLELR
Trigger: CCGCAGCTCCAGGACGCCGCACTCCACGCGCTGCCG...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGCTGCGCGTCCTCCTTaGGGCAGCGCGTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLAARPP*GSAWSA
Trigger: CGCACTCCACGCGCTGCCGCAAGGAGGACGCGCAGC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGCACCGTTTCCATGGTaGCCAGGCTGCGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLAPFPW*PGCASS
Trigger: GGAGGACGCGCAGCCTGGTCACCATGGAAACGGTGC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCACGCAAGGACTGCGGTaGAGGGCGTCCAGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLTQGLR*RASRAH
Trigger: ATGCGCCCTGGACGCCCTGCACCGCAGTCCTTGCGT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCCCAGGCGAGGACGAGTaGCTCTGTCGAGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIPGEDE*LCRAVA
Trigger: CGCCACGGCTCGACAGAGCCACTCGTCCTCGCCTGG...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR CCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTCCAGGCGAGGACGAGTaGCTCTGTCGAGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPIPGEDE*LCRAVA
Trigger: CGCCACGGCTCGACAGAGCCACTCGTCCTCGCCTGG...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490910.5
CDS-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCCTTGCGGCAGCGCGTaGAGTGCGGCGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFPCGSA*SAASWS
Trigger: GCTCCAGGACGCCGCACTCCACGCGCTGCCGCAAGG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCAGCGACGCAAGGACTaGGGTGCAGGGCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFQRRKD*GAGRPG
Trigger: CCCTGGACGCCCTGCACCGCAGTCCTTGCGTCGCTG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR GCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCGGCAGCGCGTGGAGTaGGGCGTCCTGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVRQRVE*GVLELR
Trigger: CCGCAGCTCCAGGACGCCGCACTCCACGCGCTGCCG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGGAGGCCGCCATGTCTaGAGCAGTCGACCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLGGRHV*SSRPLD
Trigger: GTCCAGAGGTCGACTGCTGCAGACATGGCGGCCTCC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCACTTTGGGAATCCGCTaGTTCCCGGCCGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLTLGIR*FPAAVE
Trigger: CTCCACCGCGGCCGGGAAGCAGCGGATTCCCAAAGT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGTCAGCCTCCGGAACTaGGATGACCAGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLVSLRN*DDQART
Trigger: CGTCCTCGCCTGGTCATCCCAGTTCCGGAGGCTGAC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR GCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCGCTGCGCGTCCTCCTTaGGGCAGCGCGTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVAARPP*GSAWSA
Trigger: CGCACTCCACGCGCTGCCGCAAGGAGGACGCGCAGC...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTGTCAGCCTCCGGAACTaGGATGACCAGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPIVSLRN*DDQART
Trigger: CGTCCTCGCCTGGTCATCCCAGTTCCGGAGGCTGAC...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490910.5
CDS-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTGGAGGCCGCCATGTCTaGAGCAGTCGACCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFGGRHV*SSRPLD
Trigger: GTCCAGAGGTCGACTGCTGCAGACATGGCGGCCTCC...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTACTTTGGGAATCCGCTaGTTCCCGGCCGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFTLGIR*FPAAVE
Trigger: CTCCACCGCGGCCGGGAAGCAGCGGATTCCCAAAGT...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR GCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTCAGCGCTCAAACACCTaGCGGGCACCGGCAACGTTT +
Preference number: 4 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPIQRSNT*RAPATF
Trigger: AAACGTTGCCGGTGCCCGGCAGGTGTTTGAGCGCTG...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTGGCTCTGTCGAGCCGTaGCGCCTGTTTTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLGSVEP*RLFLST
Trigger: TGTTGACAAAAACAGGCGCCACGGCTCGACAGAGCC...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490910.5
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCCAGGCGAGGACGAGTaGCTCTGTCGAGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVPGEDE*LCRAVA
Trigger: CGCCACGGCTCGACAGAGCCACTCGTCCTCGCCTGG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR TCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCCTCCGGAACTGGGATaGCCAGGCGAGGACGAGTGG +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVPPELG*PGEDEW
Trigger: CCACTCGTCCTCGCCTGGTCATCCCAGTTCCGGAGG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR TCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCGCACCGTTTCCATGGTaGCCAGGCTGCGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVAPFPW*PGCASS
Trigger: GGAGGACGCGCAGCCTGGTCACCATGGAAACGGTGC...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCTCTCGCTTGAGCCGTaGCGGAGGCGGCACCGTTTC +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVLSLEP*RRRHRF
Trigger: GAAACGGTGCCGCCTCCGTCACGGCTCAAGCGAGAG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCCTCTCGCTTGAGCCGTaGCGGAGGCGGCACCGTTTC +
Preference number: 4 (lower is better)
Translates to: ARALSISPRIVSNSANLILSLEP*RRRHRF
Trigger: GAAACGGTGCCGCCTCCGTCACGGCTCAAGCGAGAG...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGCGGCAGCGCGTGGAGTaGGGCGTCCTGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: FLKSSWASCFEILSRAYLRQRVE*GVLELR
Trigger: CCGCAGCTCCAGGACGCCGCACTCCACGCGCTGCCG...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCAGCGCTCAAACACCTaGCGGGCACCGGCAACGTTT +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFQRSNT*RAPATF
Trigger: AAACGTTGCCGGTGCCCGGCAGGTGTTTGAGCGCTG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGATCGCTCATAAATGGTaGGGGCCCGATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLIAHKW*GPDPPL
Trigger: AAGAGGTGGATCGGGCCCGCACCATTTATGAGCGAT...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCGCAGCAGTCGACCTCTaGACACCTGTCCCCGGCACG +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVAAVDL*TPVPGT
Trigger: CGTGCCGGGGACAGGTGTCCAGAGGTCGACTGCTGC...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGGAGGCAGCGTTGTTATaGCCCGGTCCCAGATATTTC +
Preference number: 4 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLEAALL*PGPRYF
Trigger: GAAATATCTGGGACCGGGCCATAACAACGCTGCCTC...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGCAAATCGCTCATAAATaGTGCGGGCCCGATCCACCT +
Preference number: 4 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLQIAHK*CGPDPP
Trigger: AGGTGGATCGGGCCCGCACCATTTATGAGCGATTTG...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTCTTCTCCTGAATGGGTaGGACATTGGCAATGGCCCT +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLLLLNG*DIGNGP
Trigger: AGGGCCATTGCCAATGTCCCACCCATTCAGGAGAAG...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCCCTCTACTCGAGAAGTaGTCTGACACCGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLPLLEK*SDTAVA
Trigger: AGCTACTGCGGTGTCAGATCACTTCTCGAGTAGAGG...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCGGCAGCGCGTGGAGTaGGGCGTCCTGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKRQRVE*GVLELR
Trigger: CCGCAGCTCCAGGACGCCGCACTCCACGCGCTGCCG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCGGAGGCCGCCATGTCTaGAGCAGTCGACCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVGGRHV*SSRPLD
Trigger: GTCCAGAGGTCGACTGCTGCAGACATGGCGGCCTCC...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCATCGCTCATAAATGGTaGGGGCCCGATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLIAHKW*GPDPPL
Trigger: AAGAGGTGGATCGGGCCCGCACCATTTATGAGCGAT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTCACCTTGGCCACTTTaGGAATCCGCTGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFSPWPL*ESAASR
Trigger: CCGGGAAGCAGCGGATTCCCAAAGTGGCCAAGGTGA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTCTGTGATCTTCTGTTaGGGTGGAGGTGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLSVIFC*GGGGRS
Trigger: GCTTCTTCCACCTCCACCTCAACAGAAGATCACAGA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAAACGCAAGGACTGCGGTaGAGGGCGTCCAGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQTQGLR*RASRAH
Trigger: ATGCGCCCTGGACGCCCTGCACCGCAGTCCTTGCGT...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490910.5
CDS-3UTR GCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAGCTGCGCGTCCTCCTTaGGGCAGCGCGTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQAARPP*GSAWSA
Trigger: CGCACTCCACGCGCTGCCGCAAGGAGGACGCGCAGC...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCATCGCTCATAAATGGTaGGGGCCCGATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIIAHKW*GPDPPL
Trigger: AAGAGGTGGATCGGGCCCGCACCATTTATGAGCGAT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACCTTGCGGCAGCGCGTaGAGTGCGGCGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQPCGSA*SAASWS
Trigger: GCTCCAGGACGCCGCACTCCACGCGCTGCCGCAAGG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCCAAATCGCTCATAAATaGTGCGGGCCCGATCCACCT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIQIAHK*CGPDPP
Trigger: AGGTGGATCGGGCCCGCACCATTTATGAGCGATTTG...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGGAATGGGTGGGACATTaGCAATGGCCCTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLEWVGH*QWPFHR
Trigger: TCTATGAAAGGGCCATTGCCAATGTCCCACCCATTC...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGCAAACTCAACCACTCTaGAGAACTGATGAGCGCCTA +
Preference number: 4 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLQTQPL*RTDERL
Trigger: TAGGCGCTCATCAGTTCTCCAGAGTGGTTGAGTTTG...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CAA 72 bp AGCAAAGCTGATCCATACCTTGACATGCTGCGTCCGTaGAAGCAACCGCCGGTAAAGGTTTCGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SKADPYLDMLRP*KQPPVKVSCSF
Trigger: GAAAGAACACGAAACCTTTACCGGCGGTTGCTTCAACGGACGCAGCATGTCAAGGTATGGATCAGCTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCCTCCGGAACTGGGATaGCCAGGCGAGGACGAGTGG +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANPPELG*PGEDEW
Trigger: CCACTCGTCCTCGCCTGGTCATCCCAGTTCCGGAGG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCTCTCGCTTGAGCCGTaGCGGAGGCGGCACCGTTTC +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANLSLEP*RRRHRF
Trigger: GAAACGGTGCCGCCTCCGTCACGGCTCAAGCGAGAG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTCTGTGATCTTCTGTTaGGGTGGAGGTGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVISVIFC*GGGGRS
Trigger: GCTTCTTCCACCTCCACCTCAACAGAAGATCACAGA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTATGGATCGAGCCCTTTaGATCTCCTTTAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLMDRAL*ISFRLS
Trigger: AGAAAGCCTAAAGGAGATTCAAAGGGCTCGATCCAT...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGATGGATCGAGCCCTTTaGATCTCCTTTAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLMDRAL*ISFRLS
Trigger: AGAAAGCCTAAAGGAGATTCAAAGGGCTCGATCCAT...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTTACTTGTACCAGAACTaGTTAACTCGAGGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLYLYQN*LTRGSV
Trigger: AACGCTGCCTCGAGTTAATCAGTTCTGGTACAAGTA...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp AAGCGGGCATACTTGATCCAGTTCTTAACATCAGGGTGCACGAGGACAAATCGCATCTCAGCTCAAAGTTaGTGTAGGAGTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KRAYLIQFLTSGCTRTNRISAQS*CRSARL
Trigger: AAGCCTGGCACTCCTACATCAACTTTGAGCTGAGAT...GCGATTTGTCCTCGTGCACCCTGATGTTAAGAACTGGATCAAGTATGCCCGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTGAAGACAACTCAAACTaGGCAAAGCTGATCCATACC +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLEDNSN*AKLIHT
Trigger: GGTATGGATCAGCTTTGCTCAGTTTGAGTTGTCTTC...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCCTCTACTCGAGAAGTaGTCTGACACCGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFPLLEK*SDTAVA
Trigger: AGCTACTGCGGTGTCAGATCACTTCTCGAGTAGAGG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGGCTTTGTTTTTCACTaGCCTTTGACCTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLGFVFH*PLTSRL
Trigger: CAAGCGAGAGGTCAAAGGTCAGTGAAAAACAAAGCC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496549.5
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCAGCGACGCAAGGACTaGGGTGCAGGGCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKQRRKD*GAGRPG
Trigger: CCCTGGACGCCCTGCACCGCAGTCCTTGCGTCGCTG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTATCGCTCATAAATGGTaGGGGCCCGATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFIAHKW*GPDPPL
Trigger: AAGAGGTGGATCGGGCCCGCACCATTTATGAGCGAT...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTCCTCATCTGGATGGTaGTCAGCATCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVISSSGW*SASSFS
Trigger: GGAAAAGGAGGATGCTGAGCACCATCCAGATGAGGA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCTTCTCCTGAATGGGTaGGACATTGGCAATGGCCCT +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFLLLNG*DIGNGP
Trigger: AGGGCCATTGCCAATGTCCCACCCATTCAGGAGAAG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTGACCCATCATCAGTCTaGACCTTTCTTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLDPSSV*TFLLFL
Trigger: CAAGAAGAGAAGAAAGGTCCAGACTGATGATGGGTC...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTAGTTTGAGGTTAGGTTaGTTGGCAGCATCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLSLRLG*LAASSG
Trigger: TCCAGAAGATGCTGCCAACCAACCTAACCTCAAACT...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCCTCCGGAACTGGGATaGCCAGGCGAGGACGAGTGG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKPPELG*PGEDEW
Trigger: CCACTCGTCCTCGCCTGGTCATCCCAGTTCCGGAGG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAGCACCGTTTCCATGGTaGCCAGGCTGCGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQAPFPW*PGCASS
Trigger: GGAGGACGCGCAGCCTGGTCACCATGGAAACGGTGC...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGCACCGTTTCCATGGTaGCCAGGCTGCGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKAPFPW*PGCASS
Trigger: GGAGGACGCGCAGCCTGGTCACCATGGAAACGGTGC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCCTCTCGCTTGAGCCGTaGCGGAGGCGGCACCGTTTC +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVILSLEP*RRRHRF
Trigger: GAAACGGTGCCGCCTCCGTCACGGCTCAAGCGAGAG...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTCTGTGATCTTCTGTTaGGGTGGAGGTGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFSVIFC*GGGGRS
Trigger: GCTTCTTCCACCTCCACCTCAACAGAAGATCACAGA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTACTTGTACCAGAACTaGTTAACTCGAGGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLYLYQN*LTRGSV
Trigger: AACGCTGCCTCGAGTTAATCAGTTCTGGTACAAGTA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCATCTCAGCTCAAAGTTaGTGTAGGAGTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIISAQS*CRSARL
Trigger: AAGCCTGGCACTCCTACATCAACTTTGAGCTGAGAT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTAGGGTGGGAGAGAAATaGATCTTTATGTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLRVGEK*IFMFSC
Trigger: ACAGGAGAACATAAAGATTCATTTCTCTCCCACCCT...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGACGCAAGGACTGCGGTaGAGGGCGTCCAGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKTQGLR*RASRAH
Trigger: ATGCGCCCTGGACGCCCTGCACCGCAGTCCTTGCGT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTTCTTAACATCAGGGTaGACGAGGACAAATCGCTCA +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLFLTSG*TRTNRS
Trigger: TGAGCGATTTGTCCTCGTGCACCCTGATGTTAAGAA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCCCTCTCAGGATCCTTTaGCTCCAATTCTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLPLRIL*LQFFIE
Trigger: CTCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGG...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGTTCATAGATTGCCCGTaGTCTGTCAATATCACCAAG +
Preference number: 4 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLFIDCP*SVNITK
Trigger: CTTGGTGATATTGACAGAGCACGGGCAATCTATGAA...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCGTATTCTTCCCAGCCTaGATCAGACCCATCATCAGT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIVFFPA*IRPIIS
Trigger: ACTGATGATGGGTCTGATGCAGGCTGGGAAGAATAC...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTCCTCATCTGGATGGTaGTCAGCATCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFSSSGW*SASSFS
Trigger: GGAAAAGGAGGATGCTGAGCACCATCCAGATGAGGA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCAAGATGATGTTCTCCTaGTCACTCACTAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIKMMFS*SLTRQT
Trigger: GGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCGAGCCGTGGCGCCCTaGAAGGGAGTAAGAACGGAG +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANRAVAP*KGVRTE
Trigger: CTCCGTTCTTACTCCCTTGCAGGGCGCCACGGCTCG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377340.6
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATGTCAGCCTCCGGAACTaGGATGACCAGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANVSLRN*DDQART
Trigger: CGTCCTCGCCTGGTCATCCCAGTTCCGGAGGCTGAC...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGCAGCAGTCGACCTCTaGACACCTGTCCCCGGCACG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKAAVDL*TPVPGT
Trigger: CGTGCCGGGGACAGGTGTCCAGAGGTCGACTGCTGC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAGCAGCAGTCGACCTCTaGACACCTGTCCCCGGCACG +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQAAVDL*TPVPGT
Trigger: CGTGCCGGGGACAGGTGTCCAGAGGTCGACTGCTGC...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCCTTTGTTTTTCACCTTaGCCACTTTGGGAATCCGCT +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLLCFSP*PLWESA
Trigger: AGCGGATTCCCAAAGTGGCCAAGGTGAAAAACAAAG...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTACTTCTTCTTCGTACTaGAATCTCCGTTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLTSSSY*NLRLLT
Trigger: TGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGT...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCGTGGGACATTGGCAATaGCCCTTTCATAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIVGHWQ*PFHRLL
Trigger: GAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCGAATGGGTGGGACATTaGCAATGGCCCTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIEWVGH*QWPFHR
Trigger: TCTATGAAAGGGCCATTGCCAATGTCCCACCCATTC...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGACCCATCATCAGTCTaGACCTTTCTTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLDPSSV*TFLLFL
Trigger: CAAGAAGAGAAGAAAGGTCCAGACTGATGATGGGTC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCAGTTTGAGGTTAGGTTaGTTGGCAGCATCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLSLRLG*LAASSG
Trigger: TCCAGAAGATGCTGCCAACCAACCTAACCTCAAACT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTAGCGAATTTAATCCATaGGGTACAATTTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLSEFNP*GTIFRS
Trigger: GGACCTGAAAATTGTACCTCATGGATTAAATTCGCT...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp AAGCGGGCATACTTGATCCAGTTCTTAACATCAGGGTGCACGAGGACAAATCGCCTAAACGTGGCTGACTaGTGGCTAATTCATAGATTG +
Preference number: 4 (lower is better)
Translates to: KRAYLIQFLTSGCTRTNRLNVAD*WLIHRL
Trigger: CAATCTATGAATTAGCCATCAGTCAGCCACGTTTAG...GCGATTTGTCCTCGTGCACCCTGATGTTAAGAACTGGATCAAGTATGCCCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCACTTCCTTCTTTTCCTaGAGACAACTCAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLTSFFS*RQLKLS
Trigger: GCTCAGTTTGAGTTGTCTTCAGGAAAAGAAGGAAGT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTTACTCTCTCCTTATCTaGAGCTGTTCCAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLYSLLI*SCSKFF
Trigger: GAAGAATTTGGAACAGCTTCAGATAAGGAGAGAGTA...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCCTCTACTCGAGAAGTaGTCTGACACCGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVPLLEK*SDTAVA
Trigger: AGCTACTGCGGTGTCAGATCACTTCTCGAGTAGAGG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGACTTTGGGAATCCGCTaGTTCCCGGCCGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKTLGIR*FPAAVE
Trigger: CTCCACCGCGGCCGGGAAGCAGCGGATTCCCAAAGT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR GCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTCTTCATTTCCATTTCTaGGTATTTCAGCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLLHFHF*VFQPEC
Trigger: ACACTCTGGCTGAAATACGCAGAAATGGAAATGAAG...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCAGCGCTCAAACACCTaGCGGGCACCGGCAACGTTT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANQRSNT*RAPATF
Trigger: AAACGTTGCCGGTGCCCGGCAGGTGTTTGAGCGCTG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTTCTTAACATCAGGGTaGACGAGGACAAATCGCTCA +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIFLTSG*TRTNRS
Trigger: TGAGCGATTTGTCCTCGTGCACCCTGATGTTAAGAA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTTCATAGATTGCCCGTaGTCTGTCAATATCACCAAG +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLFIDCP*SVNITK
Trigger: CTTGGTGATATTGACAGAGCACGGGCAATCTATGAA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCCTTTGTTTTTCACCTTaGCCACTTTGGGAATCCGCT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVILCFSP*PLWESA
Trigger: AGCGGATTCCCAAAGTGGCCAAGGTGAAAAACAAAG...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTGATCTTCTGTTGAGGTaGAGGTGGAAGAAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFDLLLR*RWKKLK
Trigger: CTTGAGCTTCTTCCACCTCCACCTCAACAGAAGATC...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCCAAATCGCTCATAAATaGTGCGGGCCCGATCCACCT +
Preference number: 4 (lower is better)
Translates to: ARALSISPRIVSNSANLIQIAHK*CGPDPP
Trigger: AGGTGGATCGGGCCCGCACCATTTATGAGCGATTTG...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCAAATCGCTCATAAATaGTGCGGGCCCGATCCACCT +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVQIAHK*CGPDPP
Trigger: AGGTGGATCGGGCCCGCACCATTTATGAGCGATTTG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTGAATGGGTGGGACATTaGCAATGGCCCTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFEWVGH*QWPFHR
Trigger: TCTATGAAAGGGCCATTGCCAATGTCCCACCCATTC...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCTTCTCCTGAATGGGTaGGACATTGGCAATGGCCCT +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVLLLNG*DIGNGP
Trigger: AGGGCCATTGCCAATGTCCCACCCATTCAGGAGAAG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCGCCTCTTCTCCTGAATaGGTGGGACATTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVASSPE*VGHWQW
Trigger: CCATTGCCAATGTCCCACCCATTCAGGAGAAGAGGC...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR CAA 72 bp CCACAGTTTGGCCATGGCCAGGAGTTTGAGGTTAGGTaGGTTGGCAGCATCTTCTGGAAAGATGTAATCAAA +
Preference number: 4 (lower is better)
Translates to: PQFGHGQEFEVR*VGSIFWKDVIK
Trigger: TTTGATTACATCTTTCCAGAAGATGCTGCCAACCAACCTAACCTCAAACTCCTGGCCATGGCCAAACTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTGGGTAACGCCGTGCTaGCTAGCAGCGACGCAAGGA +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKWVTPC*LAATQG
Trigger: TCCTTGCGTCGCTGCTAGTCAGCACGGCGTTACCCA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATGGGTAACGCCGTGCTaGCTAGCAGCGACGCAAGGA +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQWVTPC*LAATQG
Trigger: TCCTTGCGTCGCTGCTAGTCAGCACGGCGTTACCCA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCTCTGTGATCTTCTGTTaGGGTGGAGGTGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ARALSISPRIVSNSANLISVIFC*GGGGRS
Trigger: GCTTCTTCCACCTCCACCTCAACAGAAGATCACAGA...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTACTTCCTTCTTTTCCTaGAGACAACTCAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPITSFFS*RQLKLS
Trigger: GCTCAGTTTGAGTTGTCTTCAGGAAAAGAAGGAAGT...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCAGGATTCACTCTCATCGACGTCCTCATCTGGATGGTGCTCAGCATCCTCCTTACATTTCCTAATGCATaGTGTGGACAGACATTAGAA +
Preference number: 4 (lower is better)
Translates to: SGFTLIDVLIWMVLSILLTFPNA*CGQTLE
Trigger: TTCTAATGTCTGTCCACATCATGCATTAGGAAATGT...AAGGAGGATGCTGAGCACCATCCAGATGAGGACGTCGATGAGAGTGAATCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGAACAAACAATTTACTaGGCACTTACTATGCACCCA +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLEQTIY*ALTMHP
Trigger: TGGGTGCATAGTAAGTGCTCAGTAAATTGTTTGTTC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGCTTGCTCCTCAGGCTaGCACTCCATCCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKACSSG*HSIQRS
Trigger: TGAGCGCTGGATGGAGTGGCAGCCTGAGGAGCAAGC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGCTTGCTCCTCAGGCTaGCACTCCATCCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTACSSG*HSIQRS
Trigger: TGAGCGCTGGATGGAGTGGCAGCCTGAGGAGCAAGC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAGCTTGCTCCTCAGGCTaGCACTCCATCCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQACSSG*HSIQRS
Trigger: TGAGCGCTGGATGGAGTGGCAGCCTGAGGAGCAAGC...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTCGAGCATGGTTGACTTaGCGATTCTTCATTTCCATT +
Preference number: 4 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPIRAWLT*RFFISI
Trigger: AATGGAAATGAAGAATCGCCAAGTCAACCATGCTCG...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCCAGATATTTCGAGCATaGTTGACTTGGCGATTCTTC +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIQIFRA*LTWRFF
Trigger: GAAGAATCGCCAAGTCAACCATGCTCGAAATATCTG...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTTTGGACATTTGCCTATaGAAGTTCCCAATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPILDICL*KFPMLF
Trigger: GAAGAGCATTGGGAACTTCCATAGGCAAATGTCCAA...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCCTTCTTGACTTTCTCTaGCATGAGTTTGTCTACTCT +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLLLDFL*HEFVYS
Trigger: AGAGTAGACAAACTCATGCCAGAGAAAGTCAAGAAG...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGTGGCAACATTGCTACTaGAGATACATAATGTACAGA +
Preference number: 4 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLWQHCY*RYIMYR
Trigger: TCTGTACATTATGTATCTCCAGTAGCAATGTTGCCA...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CAA 72 bp TATGGCCCGGTCCCAGATATTTCGAGCATGGTTGACTaGGCGATTCTTCATTTCCATTTCTGCGTATTTCAG +
Preference number: 4 (lower is better)
Translates to: YGPVPDISSMVD*AILHFHFCVFQ
Trigger: CTGAAATACGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGAAATATCTGGGACCGGGCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CAA 72 bp GTTGTTATGGCCCGGTCCCAGATATTTCGAGCATGGTaGACTTGGCGATTCTTCATTTCCATTTCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: VVMARSQIFRAW*TWRFFISISAY
Trigger: ATACGCAGAAATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGAAATATCTGGGACCGGGCCATAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTATTTCGAGCATGGTTaGCTTGGCGATTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIYFEHG*LGDSSF
Trigger: AAATGAAGAATCGCCAAGTCAACCATGCTCGAAATA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCAGTTCCAAAGAGGCTTaGTACACCTGTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVSSKEA*YTCLVL
Trigger: GAGGACAAGACAGGTGTATCAAGCCTCTTTGGAACT...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCAGTTCCAAAGAGGCTTaGTACACCTGTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ARALSISPRIVSNSANLISSKEA*YTCLVL
Trigger: GAGGACAAGACAGGTGTATCAAGCCTCTTTGGAACT...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTACTCTCTCCTTATCTaGAGCTGTTCCAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIYSLLI*SCSKFF
Trigger: GAAGAATTTGGAACAGCTTCAGATAAGGAGAGAGTA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTTCATAGCACACACGTaGACAAGCCATTATTCTTTA +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLFIAHT*TSHYSL
Trigger: TAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGCTTTCTTCCCATTGTaGGTATTTTATCCAGTTACT +
Preference number: 4 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLAFFPL*VFYPVT
Trigger: AGTAACTGGATAAAATACGCACAATGGGAAGAAAGC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTCTTCATTTCCATTTCTaGGTATTTCAGCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPILHFHF*VFQPEC
Trigger: ACACTCTGGCTGAAATACGCAGAAATGGAAATGAAG...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCTCATACACTTTCCGTaGATGGGCAAAATAAGCATG +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFLIHFP*MGKISM
Trigger: CATGCTTATTTTGCCCATGCACGGAAAGTGTATGAG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTTCATAGATTGCCCGTaGTCTGTCAATATCACCAAG +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFFIDCP*SVNITK
Trigger: CTTGGTGATATTGACAGAGCACGGGCAATCTATGAA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCTCCTCATCTGGATGGTaGTCAGCATCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTSSSGW*SASSFS
Trigger: GGAAAAGGAGGATGCTGAGCACCATCCAGATGAGGA...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCAAGATGATGTTCTCCTaGTCACTCACTAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVKMMFS*SLTRQT
Trigger: GGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTCACCTTGGCCACTTTaGGAATCCGCTGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKSPWPL*ESAASR
Trigger: CCGGGAAGCAGCGGATTCCCAAAGTGGCCAAGGTGA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATCACCTTGGCCACTTTaGGAATCCGCTGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQSPWPL*ESAASR
Trigger: CCGGGAAGCAGCGGATTCCCAAAGTGGCCAAGGTGA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCGATCTTCTGTTGAGGTaGAGGTGGAAGAAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVDLLLR*RWKKLK
Trigger: CTTGAGCTTCTTCCACCTCCACCTCAACAGAAGATC...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCGTGGGACATTGGCAATaGCCCTTTCATAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: ARALSISPRIVSNSANLIVGHWQ*PFHRLL
Trigger: GAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCGAATGGGTGGGACATTaGCAATGGCCCTTTCATAGA +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVEWVGH*QWPFHR
Trigger: TCTATGAAAGGGCCATTGCCAATGTCCCACCCATTC...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTTCCCAATGCTCTTCTaGCTAATGACAGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIFPMLF*LMTDSS
Trigger: AGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTTGGACATTTGCCTATaGAAGTTCCCAATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFLDICL*KFPMLF
Trigger: GAAGAGCATTGGGAACTTCCATAGGCAAATGTCCAA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp AAGCGGGCATACTTGATCCAGTTCTTAACATCAGGGTGCACGAGGACAAATCGCTGGCAACATTGCTACTaGAGATACATAATGTACAGA +
Preference number: 4 (lower is better)
Translates to: KRAYLIQFLTSGCTRTNRWQHCY*RYIMYR
Trigger: TCTGTACATTATGTATCTCCAGTAGCAATGTTGCCA...GCGATTTGTCCTCGTGCACCCTGATGTTAAGAACTGGATCAAGTATGCCCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTCTACTATAGCACACTaGGAGATGTTTACTGGTACT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVISTIAH*EMFTGT
Trigger: AGTACCAGTAAACATCTCCCAGTGTGCTATAGTAGA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
3UTR CAA 72 bp TTCGCCTTCACTTCTTCTTCGTACTGGAATCTCCGTTaGCTCACAATGATATCTTCAATACCCCGCCTATCA +
Preference number: 4 (lower is better)
Translates to: FAFTSSSYWNLR*LTMISSIPRLS
Trigger: TGATAGGCGGGGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTGAAGGCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
3UTR CAA 72 bp GAGGAATTAGTTCCAAAGAGGCTTGATACACCTGTCTaGTCCTCTCAGGATCCTTTGCCTCCAATTCTTCAT +
Preference number: 4 (lower is better)
Translates to: EELVPKRLDTPV*SSQDPLPPILH
Trigger: ATGAAGAATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGGAACTAATTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACGGAACTTGCAGGACTaGCCTTTGACCTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTRNLQD*PLTSRL
Trigger: CAAGCGAGAGGTCAAAGGTCAGTCCTGCAAGTTCCG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000377340.6
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCGGAACTTGCAGGACTaGCCTTTGACCTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKRNLQD*PLTSRL
Trigger: CAAGCGAGAGGTCAAAGGTCAGTCCTGCAAGTTCCG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000377340.6
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATGCTAGAAATCGGCTCTaGGAGCTCACCGAAACCACA +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANARNRL*ELTETT
Trigger: TGTGGTTTCGGTGAGCTCTCAGAGCCGATTTCTAGC...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR TCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAATCTGTGATCTTCTGTTaGGGTGGAGGTGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQSVIFC*GGGGRS
Trigger: GCTTCTTCCACCTCCACCTCAACAGAAGATCACAGA...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTATTTCGAGCATGGTTaGCTTGGCGATTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFYFEHG*LGDSSF
Trigger: AAATGAAGAATCGCCAAGTCAACCATGCTCGAAATA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCTACTTGTACCAGAACTaGTTAACTCGAGGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVYLYQN*LTRGSV
Trigger: AACGCTGCCTCGAGTTAATCAGTTCTGGTACAAGTA...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTACTCTCTCCTTATCTaGAGCTGTTCCAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFYSLLI*SCSKFF
Trigger: GAAGAATTTGGAACAGCTTCAGATAAGGAGAGAGTA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTGAACAAACAATTTACTaGGCACTTACTATGCACCCA +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFEQTIY*ALTMHP
Trigger: TGGGTGCATAGTAAGTGCTCAGTAAATTGTTTGTTC...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTTTCATAGCACACACGTaGACAAGCCATTATTCTTTA +
Preference number: 4 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPIFIAHT*TSHYSL
Trigger: TAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAA...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTGCTTTCTTCCCATTGTaGGTATTTTATCCAGTTACT +
Preference number: 4 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPIAFFPL*VFYPVT
Trigger: AGTAACTGGATAAAATACGCACAATGGGAAGAAAGC...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTGTTCTTTGGACATTTaGCTATGGAAGTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFCSLDI*LWKFPM
Trigger: CATTGGGAACTTCCATAGGCAAATGTCCAAAGAACA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCAGGTGTTTCTACACATaGTCTAAACCAAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIRCFYT*SKPRVS
Trigger: ACTTACTCTTGGTTTAGAGCATGTGTAGAAACACCT...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCAAGATGATGTTCTCCTaGTCACTCACTAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTKMMFS*SLTRQT
Trigger: GGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGGCTCTGTCGAGCCGTaGCGCCTGTTTTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTGSVEP*RLFLST
Trigger: TGTTGACAAAAACAGGCGCCACGGCTCGACAGAGCC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000490910.5
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCTTCTCCTGAATGGGTaGGACATTGGCAATGGCCCT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANLLLNG*DIGNGP
Trigger: AGGGCCATTGCCAATGTCCCACCCATTCAGGAGAAG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTCTTCTTGACTTTCTCTaGCATGAGTTTGTCTACTCT +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFLLDFL*HEFVYS
Trigger: AGAGTAGACAAACTCATGCCAGAGAAAGTCAAGAAG...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCCAAACTCAACCACTCTaGAGAACTGATGAGCGCCTA +
Preference number: 4 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTQTQPL*RTDERL
Trigger: TAGGCGCTCATCAGTTCTCCAGAGTGGTTGAGTTTG...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGCTAGAAATCGGCTCTaGGAGCTCACCGAAACCACA +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKARNRL*ELTETT
Trigger: TGTGGTTTCGGTGAGCTCTCAGAGCCGATTTCTAGC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGCTAGAAATCGGCTCTaGGAGCTCACCGAAACCACA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTARNRL*ELTETT
Trigger: TGTGGTTTCGGTGAGCTCTCAGAGCCGATTTCTAGC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR TCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAATCCGTTTGCTCACAATaGTATCTTCAATACCCCGCC +
Preference number: 4 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQSVCSQ*YLQYPA
Trigger: GGCGGGGTATTGAAGATATCATTGTGAGCAAACGGA...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCTAAACGTGGCTGACTaGTGGCTAATTCATAGATTG +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVLNVAD*WLIHRL
Trigger: CAATCTATGAATTAGCCATCAGTCAGCCACGTTTAG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTACATTTCCTAATGCATaGTGTGGACAGACATTAGAA +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFTFPNA*CGQTLE
Trigger: TTCTAATGTCTGTCCACATCATGCATTAGGAAATGT...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCCTCTACTCGAGAAGTaGTCTGACACCGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKPLLEK*SDTAVA
Trigger: AGCTACTGCGGTGTCAGATCACTTCTCGAGTAGAGG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCCAAAGGCTATTAAGATaGTGTTCTCCTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: ARALSISPRIVSNSANLIQRLLR*CSPAHS
Trigger: TGAGTGAGCAGGAGAACATCATCTTAATAGCCTTTG...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCATCGCTCATAAATGGTaGGGGCCCGATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIIAHKW*GPDPPL
Trigger: AAGAGGTGGATCGGGCCCGCACCATTTATGAGCGAT...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCTTCATAGATTGCCCGTaGTCTGTCAATATCACCAAG +
Preference number: 4 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVFIDCP*SVNITK
Trigger: CTTGGTGATATTGACAGAGCACGGGCAATCTATGAA...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTTTCACACTGGCACATaGTTATTACAATTCTACCTT +
Preference number: 4 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIFHTGT*LLQFYL
Trigger: AAGGTAGAATTGTAATAAGCATGTGCCAGTGTGAAA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGAGGCAGCGTTGTTATaGCCCGGTCCCAGATATTTC +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTEAALL*PGPRYF
Trigger: GAAATATCTGGGACCGGGCCATAACAACGCTGCCTC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGAGGCAGCGTTGTTATaGCCCGGTCCCAGATATTTC +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKEAALL*PGPRYF
Trigger: GAAATATCTGGGACCGGGCCATAACAACGCTGCCTC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACAAATCGCTCATAAATaGTGCGGGCCCGATCCACCT +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTQIAHK*CGPDPP
Trigger: AGGTGGATCGGGCCCGCACCATTTATGAGCGATTTG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCACTTCTTCTTCGTACTaGAATCTCCGTTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVTSSSY*NLRLLT
Trigger: TGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGT...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCTTCTCCTGAATGGGTaGGACATTGGCAATGGCCCT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKLLLNG*DIGNGP
Trigger: AGGGCCATTGCCAATGTCCCACCCATTCAGGAGAAG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCGCCTCTTCTCCTGAATaGGTGGGACATTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIASSPE*VGHWQW
Trigger: CCATTGCCAATGTCCCACCCATTCAGGAGAAGAGGC...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAGCCTCTTCTCCTGAATaGGTGGGACATTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQASSPE*VGHWQW
Trigger: CCATTGCCAATGTCCCACCCATTCAGGAGAAGAGGC...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGCCTCTTCTCCTGAATaGGTGGGACATTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTASSPE*VGHWQW
Trigger: CCATTGCCAATGTCCCACCCATTCAGGAGAAGAGGC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTAAGTTTGGACTCAGTTaGAAAAACAAATCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: AVADARPVTKAVRLKTDFKFGLS*KNKSSS
Trigger: ACTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTT...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAATACTTGTACCAGAACTaGTTAACTCGAGGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQYLYQN*LTRGSV
Trigger: AACGCTGCCTCGAGTTAATCAGTTCTGGTACAAGTA...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATATCTCAGCTCAAAGTTaGTGTAGGAGTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANISAQS*CRSARL
Trigger: AAGCCTGGCACTCCTACATCAACTTTGAGCTGAGAT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCTACTCTCTCCTTATCTaGAGCTGTTCCAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVYSLLI*SCSKFF
Trigger: GAAGAATTTGGAACAGCTTCAGATAAGGAGAGAGTA...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCCTTCATTTCCATTTCTaGGTATTTCAGCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVLHFHF*VFQPEC
Trigger: ACACTCTGGCTGAAATACGCAGAAATGGAAATGAAG...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCCTCATACACTTTCCGTaGATGGGCAAAATAAGCATG +
Preference number: 4 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTLIHFP*MGKISM
Trigger: CATGCTTATTTTGCCCATGCACGGAAAGTGTATGAG...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAACCTCTCAGGATCCTTTaGCTCCAATTCTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQPLRIL*LQFFIE
Trigger: CTCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGG...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCTGTTCTTTGGACATTTaGCTATGGAAGTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVCSLDI*LWKFPM
Trigger: CATTGGGAACTTCCATAGGCAAATGTCCAAAGAACA...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCTGTTCTTTGGACATTTaGCTATGGAAGTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVCSLDI*LWKFPM
Trigger: CATTGGGAACTTCCATAGGCAAATGTCCAAAGAACA...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATGTATTCTTCCCAGCCTaGATCAGACCCATCATCAGT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANVFFPA*IRPIIS
Trigger: ACTGATGATGGGTCTGATGCAGGCTGGGAAGAATAC...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGGTATTCTTCCCAGCCTaGATCAGACCCATCATCAGT +
Preference number: 4 (lower is better)
Translates to: FLKSSWASCFEILSRAYLVFFPA*IRPIIS
Trigger: ACTGATGATGGGTCTGATGCAGGCTGGGAAGAATAC...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACATCCTCATCTGGATGGTaGTCAGCATCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTSSSGW*SASSFS
Trigger: GGAAAAGGAGGATGCTGAGCACCATCCAGATGAGGA...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATGTGGGACATTGGCAATaGCCCTTTCATAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANVGHWQ*PFHRLL
Trigger: GAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAACGTCCTCATCTGGATaGTGCTCAGCATCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQTSSSG*CSASSF
Trigger: AAAGGAGGATGCTGAGCACCATCCAGATGAGGACGT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCACGTCCTCATCTGGATaGTGCTCAGCATCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVITSSSG*CSASSF
Trigger: AAAGGAGGATGCTGAGCACCATCCAGATGAGGACGT...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGACGTCCTCATCTGGATaGTGCTCAGCATCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKTSSSG*CSASSF
Trigger: AAAGGAGGATGCTGAGCACCATCCAGATGAGGACGT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCATGAGTGGCAGAGCTaGGAAATGAACTCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANHEWQS*EMNSSL
Trigger: CAGACTTGAGTTCATTTCCCAGCTCTGCCACTCATG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCAAACTCAACCACTCTaGAGAACTGATGAGCGCCTA +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANQTQPL*RTDERL
Trigger: TAGGCGCTCATCAGTTCTCCAGAGTGGTTGAGTTTG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCTCTACTATAGCACACTaGGAGATGTTTACTGGTACT +
Preference number: 4 (lower is better)
Translates to: ARALSISPRIVSNSANLISTIAH*EMFTGT
Trigger: AGTACCAGTAAACATCTCCCAGTGTGCTATAGTAGA...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATATGGATCGAGCCCTTTaGATCTCCTTTAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANMDRAL*ISFRLS
Trigger: AGAAAGCCTAAAGGAGATTCAAAGGGCTCGATCCAT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGATCTCAGCTCAAAGTTaGTGTAGGAGTGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKISAQS*CRSARL
Trigger: AAGCCTGGCACTCCTACATCAACTTTGAGCTGAGAT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTCCGTTTGCTCACAATaGTATCTTCAATACCCCGCC +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKSVCSQ*YLQYPA
Trigger: GGCGGGGTATTGAAGATATCATTGTGAGCAAACGGA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATCCGTTTGCTCACAATaGTATCTTCAATACCCCGCC +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQSVCSQ*YLQYPA
Trigger: GGCGGGGTATTGAAGATATCATTGTGAGCAAACGGA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTCCGTTTGCTCACAATaGTATCTTCAATACCCCGCC +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVISVCSQ*YLQYPA
Trigger: GGCGGGGTATTGAAGATATCATTGTGAGCAAACGGA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGAGTTCCAAAGAGGCTTaGTACACCTGTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKSSKEA*YTCLVL
Trigger: GAGGACAAGACAGGTGTATCAAGCCTCTTTGGAACT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAAGTTCCAAAGAGGCTTaGTACACCTGTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTSSKEA*YTCLVL
Trigger: GAGGACAAGACAGGTGTATCAAGCCTCTTTGGAACT...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATGAAGACAACTCAAACTaGGCAAAGCTGATCCATACC +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANEDNSN*AKLIHT
Trigger: GGTATGGATCAGCTTTGCTCAGTTTGAGTTGTCTTC...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCGAACAAACAATTTACTaGGCACTTACTATGCACCCA +
Preference number: 4 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTEQTIY*ALTMHP
Trigger: TGGGTGCATAGTAAGTGCTCAGTAAATTGTTTGTTC...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCTTTTGCTTGAGAATGTaGGCAACGTATCAGCAAATA +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVFCLRM*ATYQQI
Trigger: TATTTGCTGATACGTTGCTCACATTCTCAAGCAAAA...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCCTAAAGCAGTCAGGCTaGAAACAGATTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVLKQSG*KQILSQ
Trigger: TTGAGATAAAATCTGTTTTCAGCCTGACTGCTTTAG...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAAAGGGTGGGAGAGAAATaGATCTTTATGTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQRVGEK*IFMFSC
Trigger: ACAGGAGAACATAAAGATTCATTTCTCTCCCACCCT...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAACTCATACACTTTCCGTaGATGGGCAAAATAAGCATG +
Preference number: 4 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQLIHFP*MGKISM
Trigger: CATGCTTATTTTGCCCATGCACGGAAAGTGTATGAG...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGCCTCTCAGGATCCTTTaGCTCCAATTCTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: FLKSSWASCFEILSRAYLPLRIL*LQFFIE
Trigger: CTCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGG...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGTATTCTTCCCAGCCTaGATCAGACCCATCATCAGT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKVFFPA*IRPIIS
Trigger: ACTGATGATGGGTCTGATGCAGGCTGGGAAGAATAC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAAAGATGATGTTCTCCTaGTCACTCACTAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTKMMFS*SLTRQT
Trigger: GGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAGATCTTCTGTTGAGGTaGAGGTGGAAGAAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQDLLLR*RWKKLK
Trigger: CTTGAGCTTCTTCCACCTCCACCTCAACAGAAGATC...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGATCTTCTGTTGAGGTaGAGGTGGAAGAAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKDLLLR*RWKKLK
Trigger: CTTGAGCTTCTTCCACCTCCACCTCAACAGAAGATC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCGATCTTCTGTTGAGGTaGAGGTGGAAGAAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIDLLLR*RWKKLK
Trigger: CTTGAGCTTCTTCCACCTCCACCTCAACAGAAGATC...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATAAGCACGCTCGTATATaGATCGAGCCCTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANKHARI*IEPFES
Trigger: AGATTCAAAGGGCTCGATCCATATACGAGCGTGCTT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAGTGGGACATTGGCAATaGCCCTTTCATAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQVGHWQ*PFHRLL
Trigger: GAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACAAACTCAACCACTCTaGAGAACTGATGAGCGCCTA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTQTQPL*RTDERL
Trigger: TAGGCGCTCATCAGTTCTCCAGAGTGGTTGAGTTTG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCCAAACTCAACCACTCTaGAGAACTGATGAGCGCCTA +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIQTQPL*RTDERL
Trigger: TAGGCGCTCATCAGTTCTCCAGAGTGGTTGAGTTTG...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCTACAGTTCTAGTCCTTaGGCAGTGAACAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVYSSSP*AVNKEK
Trigger: TTTTTCTTTGTTCACTGCCCAAGGACTAGAACTGTA...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCTTCCAGCTTTCACACTaGCACATGCTTATTACAATT +
Preference number: 4 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVFQLSH*HMLITI
Trigger: AATTGTAATAAGCATGTGCCAGTGTGAAAGCTGGAA...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCTTCCAGCTTTCACACTaGCACATGCTTATTACAATT +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVFQLSH*HMLITI
Trigger: AATTGTAATAAGCATGTGCCAGTGTGAAAGCTGGAA...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGATGGATCGAGCCCTTTaGATCTCCTTTAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKMDRAL*ISFRLS
Trigger: AGAAAGCCTAAAGGAGATTCAAAGGGCTCGATCCAT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCTAAACGTGGCTGACTaGTGGCTAATTCATAGATTG +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANLNVAD*WLIHRL
Trigger: CAATCTATGAATTAGCCATCAGTCAGCCACGTTTAG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGAAGACAACTCAAACTaGGCAAAGCTGATCCATACC +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTEDNSN*AKLIHT
Trigger: GGTATGGATCAGCTTTGCTCAGTTTGAGTTGTCTTC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACTTCCTTCTTTTCCTaGAGACAACTCAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANTSFFS*RQLKLS
Trigger: GCTCAGTTTGAGTTGTCTTCAGGAAAAGAAGGAAGT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCAAAGGCTATTAAGATaGTGTTCTCCTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANQRLLR*CSPAHS
Trigger: TGAGTGAGCAGGAGAACATCATCTTAATAGCCTTTG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTTCTTAACATCAGGGTaGACGAGGACAAATCGCTCA +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKFLTSG*TRTNRS
Trigger: TGAGCGATTTGTCCTCGTGCACCCTGATGTTAAGAA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACCTCTCAGGATCCTTTaGCTCCAATTCTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTPLRIL*LQFFIE
Trigger: CTCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCTTTCACACTGGCACATaGTTATTACAATTCTACCTT +
Preference number: 4 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVFHTGT*LLQFYL
Trigger: AAGGTAGAATTGTAATAAGCATGTGCCAGTGTGAAA...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACTTTGTTTTTCACCTTaGCCACTTTGGGAATCCGCT +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQLCFSP*PLWESA
Trigger: AGCGGATTCCCAAAGTGGCCAAGGTGAAAAACAAAG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAAAGCACGCTCGTATATaGATCGAGCCCTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTKHARI*IEPFES
Trigger: AGATTCAAAGGGCTCGATCCATATACGAGCGTGCTT...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAAAGCACGCTCGTATATaGATCGAGCCCTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQKHARI*IEPFES
Trigger: AGATTCAAAGGGCTCGATCCATATACGAGCGTGCTT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCAAGCACGCTCGTATATaGATCGAGCCCTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIKHARI*IEPFES
Trigger: AGATTCAAAGGGCTCGATCCATATACGAGCGTGCTT...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCAGATATTTCGAGCATaGTTGACTTGGCGATTCTTC +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANQIFRA*LTWRFF
Trigger: GAAGAATCGCCAAGTCAACCATGCTCGAAATATCTG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACTTCTTCTTCGTACTaGAATCTCCGTTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANTSSSY*NLRLLT
Trigger: TGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGACCCATCATCAGTCTaGACCTTTCTTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTDPSSV*TFLLFL
Trigger: CAAGAAGAGAAGAAAGGTCCAGACTGATGATGGGTC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCGACCCATCATCAGTCTaGACCTTTCTTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIDPSSV*TFLLFL
Trigger: CAAGAAGAGAAGAAAGGTCCAGACTGATGATGGGTC...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGAGTTTGAGGTTAGGTTaGTTGGCAGCATCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKSLRLG*LAASSG
Trigger: TCCAGAAGATGCTGCCAACCAACCTAACCTCAAACT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTATTTCGAGCATGGTTaGCTTGGCGATTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANYFEHG*LGDSSF
Trigger: AAATGAAGAATCGCCAAGTCAACCATGCTCGAAATA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATAGCGAATTTAATCCATaGGGTACAATTTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANSEFNP*GTIFRS
Trigger: GGACCTGAAAATTGTACCTCATGGATTAAATTCGCT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGAGCGAATTTAATCCATaGGGTACAATTTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FLKSSWASCFEILSRAYLSEFNP*GTIFRS
Trigger: GGACCTGAAAATTGTACCTCATGGATTAAATTCGCT...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCTAAACGTGGCTGACTaGTGGCTAATTCATAGATTG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKLNVAD*WLIHRL
Trigger: CAATCTATGAATTAGCCATCAGTCAGCCACGTTTAG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACTAAACGTGGCTGACTaGTGGCTAATTCATAGATTG +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTLNVAD*WLIHRL
Trigger: CAATCTATGAATTAGCCATCAGTCAGCCACGTTTAG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAACTTCCTTCTTTTCCTaGAGACAACTCAAACTGAGC +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQTSFFS*RQLKLS
Trigger: GCTCAGTTTGAGTTGTCTTCAGGAAAAGAAGGAAGT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACAAAGGCTATTAAGATaGTGTTCTCCTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTQRLLR*CSPAHS
Trigger: TGAGTGAGCAGGAGAACATCATCTTAATAGCCTTTG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCAAAGGCTATTAAGATaGTGTTCTCCTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKQRLLR*CSPAHS
Trigger: TGAGTGAGCAGGAGAACATCATCTTAATAGCCTTTG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAAGGGTGGGAGAGAAATaGATCTTTATGTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQRVGEK*IFMFSC
Trigger: ACAGGAGAACATAAAGATTCATTTCTCTCCCACCCT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCCTCATACACTTTCCGTaGATGGGCAAAATAAGCATG +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVILIHFP*MGKISM
Trigger: CATGCTTATTTTGCCCATGCACGGAAAGTGTATGAG...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCTCATACACTTTCCGTaGATGGGCAAAATAAGCATG +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKLIHFP*MGKISM
Trigger: CATGCTTATTTTGCCCATGCACGGAAAGTGTATGAG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTGTTCTTTGGACATTTaGCTATGGAAGTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANCSLDI*LWKFPM
Trigger: CATTGGGAACTTCCATAGGCAAATGTCCAAAGAACA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTTCATAGATTGCCCGTaGTCTGTCAATATCACCAAG +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIFIDCP*SVNITK
Trigger: CTTGGTGATATTGACAGAGCACGGGCAATCTATGAA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCGAGCATGGTTGACTTaGCGATTCTTCATTTCCATT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKRAWLT*RFFISI
Trigger: AATGGAAATGAAGAATCGCCAAGTCAACCATGCTCG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACGAGCATGGTTGACTTaGCGATTCTTCATTTCCATT +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQRAWLT*RFFISI
Trigger: AATGGAAATGAAGAATCGCCAAGTCAACCATGCTCG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACGAGCATGGTTGACTTaGCGATTCTTCATTTCCATT +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTRAWLT*RFFISI
Trigger: AATGGAAATGAAGAATCGCCAAGTCAACCATGCTCG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCCGAGCATGGTTGACTTaGCGATTCTTCATTTCCATT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIRAWLT*RFFISI
Trigger: AATGGAAATGAAGAATCGCCAAGTCAACCATGCTCG...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACAGATATTTCGAGCATaGTTGACTTGGCGATTCTTC +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQQIFRA*LTWRFF
Trigger: GAAGAATCGCCAAGTCAACCATGCTCGAAATATCTG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACAGATATTTCGAGCATaGTTGACTTGGCGATTCTTC +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTQIFRA*LTWRFF
Trigger: GAAGAATCGCCAAGTCAACCATGCTCGAAATATCTG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAACTTCTTCTTCGTACTaGAATCTCCGTTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTTSSSY*NLRLLT
Trigger: TGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGT...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGTTCCCAATGCTCTTCTaGCTAATGACAGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLKSSWASCFEILSRAYLFPMLF*LMTDSS
Trigger: AGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAA...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTTGGACATTTGCCTATaGAAGTTCCCAATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKLDICL*KFPMLF
Trigger: GAAGAGCATTGGGAACTTCCATAGGCAAATGTCCAA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATTGGACATTTGCCTATaGAAGTTCCCAATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQLDICL*KFPMLF
Trigger: GAAGAGCATTGGGAACTTCCATAGGCAAATGTCCAA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAAAAGTTTGGACTCAGTTaGAAAAACAAATCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQKFGLS*KNKSSS
Trigger: ACTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTT...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CCA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAATTCCAGCTTTCACACTaGCACATGCTTATTACAATT +
Preference number: 4 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQFQLSH*HMLITI
Trigger: AATTGTAATAAGCATGTGCCAGTGTGAAAGCTGGAA...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATATTTCGAGCATGGTTaGCTTGGCGATTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQYFEHG*LGDSSF
Trigger: AAATGAAGAATCGCCAAGTCAACCATGCTCGAAATA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAAGCGAATTTAATCCATaGGGTACAATTTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTSEFNP*GTIFRS
Trigger: GGACCTGAAAATTGTACCTCATGGATTAAATTCGCT...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATACTCTCTCCTTATCTaGAGCTGTTCCAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQYSLLI*SCSKFF
Trigger: GAAGAATTTGGAACAGCTTCAGATAAGGAGAGAGTA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGAACAAACAATTTACTaGGCACTTACTATGCACCCA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTEQTIY*ALTMHP
Trigger: TGGGTGCATAGTAAGTGCTCAGTAAATTGTTTGTTC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGATTCTAGGAAGACTGTaGTTAAGTCACTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: FLKSSWASCFEILSRAYLILGRL*LSHLHS
Trigger: AGAATGCAAGTGACTTAATCACAGTCTTCCTAGAAT...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATGCTTTCTTCCCATTGTaGGTATTTTATCCAGTTACT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANAFFPL*VFYPVT
Trigger: AGTAACTGGATAAAATACGCACAATGGGAAGAAAGC...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGGCTTTCTTCCCATTGTaGGTATTTTATCCAGTTACT +
Preference number: 4 (lower is better)
Translates to: FLKSSWASCFEILSRAYLAFFPL*VFYPVT
Trigger: AGTAACTGGATAAAATACGCACAATGGGAAGAAAGC...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCTTCATTTCCATTTCTaGGTATTTCAGCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKLHFHF*VFQPEC
Trigger: ACACTCTGGCTGAAATACGCAGAAATGGAAATGAAG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCCTTCATTTCCATTTCTaGGTATTTCAGCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVILHFHF*VFQPEC
Trigger: ACACTCTGGCTGAAATACGCAGAAATGGAAATGAAG...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTGTTCTTTGGACATTTaGCTATGGAAGTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVICSLDI*LWKFPM
Trigger: CATTGGGAACTTCCATAGGCAAATGTCCAAAGAACA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATAGGTGTTTCTACACATaGTCTAAACCAAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANRCFYT*SKPRVS
Trigger: ACTTACTCTTGGTTTAGAGCATGTGTAGAAACACCT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTTCCCAATGCTCTTCTaGCTAATGACAGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIFPMLF*LMTDSS
Trigger: AGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATTCCCAATGCTCTTCTaGCTAATGACAGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQFPMLF*LMTDSS
Trigger: AGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACTTCTTGACTTTCTCTaGCATGAGTTTGTCTACTCT +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTLLDFL*HEFVYS
Trigger: AGAGTAGACAAACTCATGCCAGAGAAAGTCAAGAAG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCCTTCTTGACTTTCTCTaGCATGAGTTTGTCTACTCT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVILLDFL*HEFVYS
Trigger: AGAGTAGACAAACTCATGCCAGAGAAAGTCAAGAAG...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCTTCTTGACTTTCTCTaGCATGAGTTTGTCTACTCT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKLLDFL*HEFVYS
Trigger: AGAGTAGACAAACTCATGCCAGAGAAAGTCAAGAAG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTGGCAACATTGCTACTaGAGATACATAATGTACAGA +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANWQHCY*RYIMYR
Trigger: TCTGTACATTATGTATCTCCAGTAGCAATGTTGCCA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTTCCAGCTTTCACACTaGCACATGCTTATTACAATT +
Preference number: 4 (lower is better)
Translates to: SVNAVEFLLENVSNVSANFQLSH*HMLITI
Trigger: AATTGTAATAAGCATGTGCCAGTGTGAAAGCTGGAA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCACATTTCCTAATGCATaGTGTGGACAGACATTAGAA +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVITFPNA*CGQTLE
Trigger: TTCTAATGTCTGTCCACATCATGCATTAGGAAATGT...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTTCATAGCACACACGTaGACAAGCCATTATTCTTTA +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIFIAHT*TSHYSL
Trigger: TAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACATTTTGCTTGAGAATGTaGGCAACGTATCAGCAAATA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTFCLRM*ATYQQI
Trigger: TATTTGCTGATACGTTGCTCACATTCTCAAGCAAAA...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACTAAAGCAGTCAGGCTaGAAACAGATTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQLKQSG*KQILSQ
Trigger: TTGAGATAAAATCTGTTTTCAGCCTGACTGCTTTAG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACTAAAGCAGTCAGGCTaGAAACAGATTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTLKQSG*KQILSQ
Trigger: TTGAGATAAAATCTGTTTTCAGCCTGACTGCTTTAG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAATTCTAGGAAGACTGTaGTTAAGTCACTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQILGRL*LSHLHS
Trigger: AGAATGCAAGTGACTTAATCACAGTCTTCCTAGAAT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGATTCTAGGAAGACTGTaGTTAAGTCACTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKILGRL*LSHLHS
Trigger: AGAATGCAAGTGACTTAATCACAGTCTTCCTAGAAT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR TCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCATTCTAGGAAGACTGTaGTTAAGTCACTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIILGRL*LSHLHS
Trigger: AGAATGCAAGTGACTTAATCACAGTCTTCCTAGAAT...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCGCTTTCTTCCCATTGTaGGTATTTTATCCAGTTACT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIAFFPL*VFYPVT
Trigger: AGTAACTGGATAAAATACGCACAATGGGAAGAAAGC...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGAGGTGTTTCTACACATaGTCTAAACCAAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKRCFYT*SKPRVS
Trigger: ACTTACTCTTGGTTTAGAGCATGTGTAGAAACACCT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAAGGTGTTTCTACACATaGTCTAAACCAAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQRCFYT*SKPRVS
Trigger: ACTTACTCTTGGTTTAGAGCATGTGTAGAAACACCT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGAAGTTTGGACTCAGTTaGAAAAACAAATCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKKFGLS*KNKSSS
Trigger: ACTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTGGCAACATTGCTACTaGAGATACATAATGTACAGA +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIWQHCY*RYIMYR
Trigger: TCTGTACATTATGTATCTCCAGTAGCAATGTTGCCA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACATACAGTTCTAGTCCTTaGGCAGTGAACAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTYSSSP*AVNKEK
Trigger: TTTTTCTTTGTTCACTGCCCAAGGACTAGAACTGTA...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTTCCAGCTTTCACACTaGCACATGCTTATTACAATT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIFQLSH*HMLITI
Trigger: AATTGTAATAAGCATGTGCCAGTGTGAAAGCTGGAA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACATTTCACACTGGCACATaGTTATTACAATTCTACCTT +
Preference number: 4 (lower is better)
Translates to: VNAVEFLLENVSNVSANTFHTGT*LLQFYL
Trigger: AAGGTAGAATTGTAATAAGCATGTGCCAGTGTGAAA...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR GCA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTTTCACACTGGCACATaGTTATTACAATTCTACCTT +
Preference number: 4 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIFHTGT*LLQFYL
Trigger: AAGGTAGAATTGTAATAAGCATGTGCCAGTGTGAAA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS TCA 90 bp CAGGGCGTCCAGGGCGCATCCCCAGGTCAGCCTCCGGAACTGGGATaGCCAGGCGAGGACGAGTGGCTCTGTCGAGCCGTGGCGCCCTGC +
Preference number: 5 (lower is better)
Translates to: QGVQGASPGQPPELG*PGEDEWLCRAVAPC
Trigger: GCAGGGCGCCACGGCTCGACAGAGCCACTCGTCCTCGCCTGGTCATCCCAGTTCCGGAGGCTGACCTGGGGATGCGCCCTGGACGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377340.6
CDS CCA 90 bp CGGTGCAGGGCGTCCAGGGCGCATCCCCAGGTCAGCCTCCGGAACTaGGATGACCAGGCGAGGACGAGTGGCTCTGTCGAGCCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: RCRASRAHPQVSLRN*DDQARTSGSVEPWR
Trigger: GCGCCACGGCTCGACAGAGCCACTCGTCCTCGCCTGGTCATCCCAGTTCCGGAGGCTGACCTGGGGATGCGCCCTGGACGCCCTGCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS TCA 90 bp CAGGGCGTCCAGGGCGCATCCCCAGGTCAGCCTCCGGAACTGGGATaGCCAGGCGAGGACGAGTGGCTCTGTCGAGCCGTGGCGCCTGTT +
Preference number: 5 (lower is better)
Translates to: QGVQGASPGQPPELG*PGEDEWLCRAVAPV
Trigger: AACAGGCGCCACGGCTCGACAGAGCCACTCGTCCTCGCCTGGTCATCCCAGTTCCGGAGGCTGACCTGGGGATGCGCCCTGGACGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000490910.5
CDS TCA 90 bp GAGTGCGGCGTCCTGGAGCTGCGGATGAGGTGGGTAACGCCGTGCTaGCTAGCAGCGACGCAAGGACTGCGGTGCAGGGCGTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: ECGVLELRMRWVTPC*LAATQGLRCRASRA
Trigger: CGCCCTGGACGCCCTGCACCGCAGTCCTTGCGTCGCTGCTAGTCAGCACGGCGTTACCCACCTCATCCGCAGCTCCAGGACGCCGCACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS CCA 90 bp TTTTCACCTTGGCCACTTTGGGAATCCGCTGCTTCCCGGCCGCGGTaGAGGCCGCCATGTCTGCAGCAGTCGACCTCTGGACACCTGTCC +
Preference number: 5 (lower is better)
Translates to: FSPWPLWESAASRPR*RPPCLQQSTSGHLS
Trigger: GGACAGGTGTCCAGAGGTCGACTGCTGCAGACATGGCGGCCTCCACCGCGGCCGGGAAGCAGCGGATTCCCAAAGTGGCCAAGGTGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS TCA 90 bp GAAGCGGAACTTGCAGGACTGACCTTTGACCTCTCGCTTGAGCCGTaGCGGAGGCGGCACCGTTTCCATGGTGACCAGGCTGCGCGTCCT +
Preference number: 5 (lower is better)
Translates to: EAELAGLTFDLSLEP*RRRHRFHGDQAARP
Trigger: AGGACGCGCAGCCTGGTCACCATGGAAACGGTGCCGCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGGTCAGTCCTGCAAGTTCCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000377340.6
CDS TCA 90 bp CCGGGGCTTTGTTTTTCACTGACCTTTGACCTCTCGCTTGAGCCGTaGCGGAGGCGGCACCGTTTCCATGGTGACCAGGCTGCGCGTCCT +
Preference number: 5 (lower is better)
Translates to: PGLCFSLTFDLSLEP*RRRHRFHGDQAARP
Trigger: AGGACGCGCAGCCTGGTCACCATGGAAACGGTGCCGCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGGTCAGTGAAAAACAAAGCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496549.5
CDS-3UTR CAA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGGCTGCGCGTCCTCCTaGCGGCAGCGCGTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLGCASS*RQRVEC
Trigger: GCACTCCACGCGCTGCCGCAAGGAGGACGCGCAGCC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCGGCTGCGCGTCCTCCTaGCGGCAGCGCGTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIGCASS*RQRVEC
Trigger: GCACTCCACGCGCTGCCGCAAGGAGGACGCGCAGCC...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS TCA 90 bp GAGTGCGGCGTCCTGGAGCTGCGGATGAGGTGGGTAACGCCGTGCTaGCTAGCAGCGACGCAAGGATGTTTTTGTCAACAGCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: ECGVLELRMRWVTPC*LAATQGCFCQQHFP
Trigger: TGGGAAATGCTGTTGACAAAAACATCCTTGCGTCGCTGCTAGTCAGCACGGCGTTACCCACCTCATCCGCAGCTCCAGGACGCCGCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496549.5
CDS CCA 90 bp CGGAACTGGGATGACCAGGCGAGGACGAGTGGCTCTGTCGAGCCGTaGCGCCTGTTTTTGTCAACAGCATTTCCCAAAGTGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RNWDDQARTSGSVEP*RLFLSTAFPKVSFW
Trigger: CCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACAGGCGCCACGGCTCGACAGAGCCACTCGTCCTCGCCTGGTCATCCCAGTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000490910.5
CDS TCA 90 bp AGAAAACAAACAGGATCTCGGAACCGGAAGCGGAACTTGCAGGACTaGCCTTTGACCTCTCGCTTGAGCCGTGACGGAGGCGGCACCGTT +
Preference number: 5 (lower is better)
Translates to: RKQTGSRNRKRNLQD*PLTSRLSRDGGGTV
Trigger: AACGGTGCCGCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGGTCAGTCCTGCAAGTTCCGCTTCCGGTTCCGAGATCCTGTTTGTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000377340.6
CDS-3UTR CAA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCGGCTGCGCGTCCTCCTaGCGGCAGCGCGTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVGCASS*RQRVEC
Trigger: GCACTCCACGCGCTGCCGCAAGGAGGACGCGCAGCC...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCCCTTTGACCTCTCGCTaGAGCCGTGACGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIPLTSR*SRDGGG
Trigger: GCCGCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGG...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS CCA 90 bp TCGAGCCGTGGCGCCCTGCAAGGGAGTAAGAACGGAGCTCCAATCTaGATGTGTTTTTGTCAACAGCATTTCCCAAAGTGTCCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SSRGALQGSKNGAPI*MCFCQQHFPKCPSG
Trigger: TCCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACACATCCAGATTGGAGCTCCGTTCTTACTCCCTTGCAGGGCGCCACGGCTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377340.6
CDS-3UTR CAA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCACCTCAGCCGGGGCTTaGTTTTTCACCTTGGCCACT +
Preference number: 5 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLTSAGA*FFTLAT
Trigger: AGTGGCCAAGGTGAAAAACAAAGCCCCGGCTGAGGT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CAA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGGCCCGATCCACCTCTTaGTATCTCAGCTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLARSTS*YLSSKL
Trigger: CAACTTTGAGCTGAGATACAAAGAGGTGGATCGGGC...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTGACATGCTGCGTCCGTaGAAGCAACCGCCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: AVADARPVTKAVRLKTDFDMLRP*KQPPVK
Trigger: CTTTACCGGCGGTTGCTTCAACGGACGCAGCATGTC...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGCTTTGTTTTTCACCTaGGCCACTTTGGGAATCCGC +
Preference number: 5 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLALFFT*ATLGIR
Trigger: GCGGATTCCCAAAGTGGCCAAGGTGAAAAACAAAGC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CAA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCGCCCGATCCACCTCTTaGTATCTCAGCTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLARSTS*YLSSKL
Trigger: CAACTTTGAGCTGAGATACAAAGAGGTGGATCGGGC...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTACCTCAGCCGGGGCTTaGTTTTTCACCTTTGACCTC +
Preference number: 5 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPITSAGA*FFTFDL
Trigger: GAGGTCAAAGGTGAAAAACAAAGCCCCGGCTGAGGT...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490910.5
CDS-3UTR CAA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGCCTTTGACCTCTCGCTaGAGCCGTGACGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: FLKSSWASCFEILSRAYLPLTSR*SRDGGG
Trigger: GCCGCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGG...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCTTCACCTTGGCCACTTaGGGAATCCGCTGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVFTLAT*GIRCFP
Trigger: CGGGAAGCAGCGGATTCCCAAAGTGGCCAAGGTGAA...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CAA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCGCTTTGTTTTTCACCTaGGCCACTTTGGGAATCCGC +
Preference number: 5 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIALFFT*ATLGIR
Trigger: GCGGATTCCCAAAGTGGCCAAGGTGAAAAACAAAGC...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CAA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCGCCCGATCCACCTCTTaGTATCTCAGCTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIARSTS*YLSSKL
Trigger: CAACTTTGAGCTGAGATACAAAGAGGTGGATCGGGC...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCCTTTGTTTTTCACCTTaGACCTCTCGCTTGAGCCGT +
Preference number: 5 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLLCFSP*TSRLSR
Trigger: ACGGCTCAAGCGAGAGGTCAAAGGTGAAAAACAAAG...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490910.5
CDS CCA 90 bp CCGTGGCGCCTGTTTTTGTCAACAGCATTTCCCAAAGTGTCCTTCTaGAACGTTAGGTTCTCCACTGTTGCCGTCATTAGAGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: PWRLFLSTAFPKVSF*NVRFSTVAVIRDSL
Trigger: AAGAGAATCTCTAATGACGGCAACAGTGGAGAACCTAACGTTCCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACAGGCGCCACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000490910.5
CDS-3UTR CAA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCCTTTGACCTCTCGCTaGAGCCGTGACGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKPLTSR*SRDGGG
Trigger: GCCGCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACCTTTGACCTCTCGCTaGAGCCGTGACGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQPLTSR*SRDGGG
Trigger: GCCGCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTGCTTTGTTTTTCACCTaGGCCACTTTGGGAATCCGC +
Preference number: 5 (lower is better)
Translates to: AVADARPVTKAVRLKTDFALFFT*ATLGIR
Trigger: GCGGATTCCCAAAGTGGCCAAGGTGAAAAACAAAGC...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CAA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCACCTCAGCCGGGGCTTaGTTTTTCACCTTGGCCACT +
Preference number: 5 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVTSAGA*FFTLAT
Trigger: AGTGGCCAAGGTGAAAAACAAAGCCCCGGCTGAGGT...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CAA 90 bp CCAAAGAGGCTTGATACACCTGTCTTGTCCTCTCAGGATCCTTTGCCTCCAATTTTGAGGTTAGGTTGGTaGGCAGCATCTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: PKRLDTPVLSSQDPLPPILRLGW*AASSGK
Trigger: CTTTCCAGAAGATGCTGCCAACCAACCTAACCTCAA...AATTGGAGGCAAAGGATCCTGAGAGGACAAGACAGGTGTATCAAGCCTCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTGAGTTTGAGGTTAGGTaGGTTGGCAGCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: AVADARPVTKAVRLKTDFEFEVR*VGSIFW
Trigger: CCAGAAGATGCTGCCAACCAACCTAACCTCAAACTC...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTGTTTCTTCCACAGTTaGGCCATGGCCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: AVADARPVTKAVRLKTDFCFFHS*AMARSL
Trigger: CAAACTCCTGGCCATGGCCAAACTGTGGAAGAAACA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GTGGGACATTGGCAATGGCCCTTTCATAGACTTCTCTCACGGCTTCAGCTTCTGATATTTCGAGCATGGTaGACTTGGCGATTCTTCATT +
Preference number: 5 (lower is better)
Translates to: VGHWQWPFHRLLSRLQLLIFRAW*TWRFFI
Trigger: AATGAAGAATCGCCAAGTCAACCATGCTCGAAATAT...CAGAAGCTGAAGCCGTGAGAGAAGTCTATGAAAGGGCCATTGCCAATGTCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCCTTGGGCATCTTGTTTaGAAATTCTGTCCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: KMMFSCSLTRQTSTREVILGHLV*KFCPGH
Trigger: ATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAG...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp AAGCGGGCATACTTGATCCAGTTCTTAACATCAGGGTGCACGAGGACAAATCGCTGGCTAATTCATAGATaGCCCGTGCTCTGTCAATAT +
Preference number: 5 (lower is better)
Translates to: KRAYLIQFLTSGCTRTNRWLIHR*PVLCQY
Trigger: ATATTGACAGAGCACGGGCAATCTATGAATTAGCCA...GCGATTTGTCCTCGTGCACCCTGATGTTAAGAACTGGATCAAGTATGCCCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCCCGTGGCGCCTGTTTTaGTCAACAGCATTTCCCAAA +
Preference number: 5 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVPWRLF*STAFPK
Trigger: TTTGGGAAATGCTGTTGACAAAAACAGGCGCCACGG...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490910.5
CDS-3UTR CAA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTTCACCTTGGCCACTTaGGGAATCCGCTGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: SVNAVEFLLENVSNVSANFTLAT*GIRCFP
Trigger: CGGGAAGCAGCGGATTCCCAAAGTGGCCAAGGTGAA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTCGAGCATGGTTGACTaGGCGATTCTTCATTTCCAT +
Preference number: 5 (lower is better)
Translates to: AVADARPVTKAVRLKTDFSSMVD*AILHFH
Trigger: ATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCATATTTCGAGCATGGTaGACTTGGCGATTCTTCATT +
Preference number: 5 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLIFRAW*TWRFFI
Trigger: AATGAAGAATCGCCAAGTCAACCATGCTCGAAATAT...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCTTGTTCTTTGGACATTaGCCTATGGAAGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLLFFGH*PMEVPN
Trigger: ATTGGGAACTTCCATAGGCAAATGTCCAAAGAACAA...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTGGCTAATTCATAGATaGCCCGTGCTCTGTCAATAT +
Preference number: 5 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIWLIHR*PVLCQY
Trigger: ATATTGACAGAGCACGGGCAATCTATGAATTAGCCA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATGACATGCTGCGTCCGTaGAAGCAACCGCCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: SVNAVEFLLENVSNVSANDMLRP*KQPPVK
Trigger: CTTTACCGGCGGTTGCTTCAACGGACGCAGCATGTC...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp AAGCGGGCATACTTGATCCAGTTCTTAACATCAGGGTGCACGAGGACAAATCGCAAAGTTTGGACTCAGTaGGAAAAACAAATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: KRAYLIQFLTSGCTRTNRKVWTQ*EKQIQQ
Trigger: CTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTTT...GCGATTTGTCCTCGTGCACCCTGATGTTAAGAACTGGATCAAGTATGCCCGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS CCA 90 bp GACGCAAGGATGTTTTTGTCAACAGCATTTCCCAAAGTGTCCTTCTaGAACGTTAGGTTCTCCACTGTTGCCGTCATTAGAGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: DARMFLSTAFPKVSF*NVRFSTVAVIRDSL
Trigger: AAGAGAATCTCTAATGACGGCAACAGTGGAGAACCTAACGTTCCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACATCCTTGCGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496549.5
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTTCACCTTGGCCACTTaGGGAATCCGCTGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIFTLAT*GIRCFP
Trigger: CGGGAAGCAGCGGATTCCCAAAGTGGCCAAGGTGAA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTCAAAGCGGGCATACTaGATCCAGTTCTTAACATCA +
Preference number: 5 (lower is better)
Translates to: AVADARPVTKAVRLKTDFSKRAY*IQFLTS
Trigger: TGATGTTAAGAACTGGATCAAGTATGCCCGCTTTGA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp AAGATGATGTTCTCCTGCTCACTCACTAGGCAGACCTCTACTCGAGAAGTGATCTACTGGAATCTCCGTTaGCTCACAATGATATCTTCA +
Preference number: 5 (lower is better)
Translates to: KMMFSCSLTRQTSTREVIYWNLR*LTMISS
Trigger: TGAAGATATCATTGTGAGCAAACGGAGATTCCAGTA...GATCACTTCTCGAGTAGAGGTCTGCCTAGTGAGTGAGCAGGAGAACATCATCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TCCCTGACTCTGGGTGAGCCAAAGGCTATTAAGATGATGTTCTCCTGCTCACTCCAATATCACCAAGGATaGTCTCTAATTCAGCGAATT +
Preference number: 5 (lower is better)
Translates to: SLTLGEPKAIKMMFSCSLQYHQG*SLIQRI
Trigger: AATTCGCTGAATTAGAGACAATCCTTGGTGATATTG...GAGTGAGCAGGAGAACATCATCTTAATAGCCTTTGGCTCACCCAGAGTCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGGACATGCTGCGTCCGTaGAAGCAACCGCCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKDMLRP*KQPPVK
Trigger: CTTTACCGGCGGTTGCTTCAACGGACGCAGCATGTC...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCGACATGCTGCGTCCGTaGAAGCAACCGCCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIDMLRP*KQPPVK
Trigger: CTTTACCGGCGGTTGCTTCAACGGACGCAGCATGTC...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTTTCTCTGGCATGAGTTaGTCTACTCTCTCCTTATCT +
Preference number: 5 (lower is better)
Translates to: AVADARPVTKAVRLKTDFFSGMS*STLSLS
Trigger: AGATAAGGAGAGAGTAGACAAACTCATGCCAGAGAA...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp ATAGCACACTGGGAGATGTTTACTGGTACTCTAGGTAGAAATGACTCCATTGTCTTGAGGTTAGGTTGGTaGGCAGCATCTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: IAHWEMFTGTLGRNDSIVLRLGW*AASSGK
Trigger: CTTTCCAGAAGATGCTGCCAACCAACCTAACCTCAA...GACAATGGAGTCATTTCTACCTAGAGTACCAGTAAACATCTCCCAGTGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAACCTCAGCCGGGGCTTaGTTTTTCACCTTGGCCACT +
Preference number: 5 (lower is better)
Translates to: VNAVEFLLENVSNVSANTTSAGA*FFTLAT
Trigger: AGTGGCCAAGGTGAAAAACAAAGCCCCGGCTGAGGT...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS-3UTR CAA 90 bp ATTTGCCTATGGAAGTTCCCAATGCTCTTCTGGCTAATGACAGATTCTTCTGTCCTTGGGCATCTTGTTTaGAAATTCTGTCCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: ICLWKFPMLFWLMTDSSVLGHLV*KFCPGH
Trigger: ATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAG...GACAGAAGAATCTGTCATTAGCCAGAAGAGCATTGGGAACTTCCATAGGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAAGAGTTTGAGGTTAGGTaGGTTGGCAGCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQEFEVR*VGSIFW
Trigger: CCAGAAGATGCTGCCAACCAACCTAACCTCAAACTC...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS CCA 90 bp AATCTGGATGTGTTTTTGTCAACAGCATTTCCCAAAGTGTCCTTCTaGAACGTTAGGTTCTCCACTGTTGCCGTCATTAGAGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: NLDVFLSTAFPKVSF*NVRFSTVAVIRDSL
Trigger: AAGAGAATCTCTAATGACGGCAACAGTGGAGAACCTAACGTTCCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACACATCCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377340.6
CDS-3UTR CAA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCTCAAAGCGGGCATACTaGATCCAGTTCTTAACATCA +
Preference number: 5 (lower is better)
Translates to: ARALSISPRIVSNSANLISKRAY*IQFLTS
Trigger: TGATGTTAAGAACTGGATCAAGTATGCCCGCTTTGA...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCTCCTCTCAGGATCCTTaGCCTCCAATTCTTCATAGA +
Preference number: 5 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTSSQDP*PPILHR
Trigger: TCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGGA...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATGAGTTTGAGGTTAGGTaGGTTGGCAGCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SVNAVEFLLENVSNVSANEFEVR*VGSIFW
Trigger: CCAGAAGATGCTGCCAACCAACCTAACCTCAAACTC...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GCAGTAGCTGATGCTCGTCCAGTGACTAAAGCAGTCAGGCTGAAAACAGATTTTAATGCAGTTGAATTTTaGCTTGAGAATGTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: AVADARPVTKAVRLKTDFNAVEF*LENVSN
Trigger: GTTGCTCACATTCTCAAGCAAAAATTCAACTGCATT...AAAATCTGTTTTCAGCCTGACTGCTTTAGTCACTGGACGAGCATCAGCTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGCCGTGGCGCCTGTTTTaGTCAACAGCATTTCCCAAA +
Preference number: 5 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKPWRLF*STAFPK
Trigger: TTTGGGAAATGCTGTTGACAAAAACAGGCGCCACGG...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000490910.5
CDS-3UTR CAA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAATCGAGCATGGTTGACTaGGCGATTCTTCATTTCCAT +
Preference number: 5 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQSSMVD*AILHFH
Trigger: ATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGA...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACAGCCCGATCCACCTCTTaGTATCTCAGCTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: VNAVEFLLENVSNVSANTARSTS*YLSSKL
Trigger: CAACTTTGAGCTGAGATACAAAGAGGTGGATCGGGC...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTTGAGGTTAGGTTGGTaGGCAGCATCTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: SVNAVEFLLENVSNVSANLRLGW*AASSGK
Trigger: CTTTCCAGAAGATGCTGCCAACCAACCTAACCTCAA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTTTAAAGAGTTCTTGGGCATCTTGTTTTGAAATTCTGTCCAGGGCATACTTGTTGAGGTTAGGTTGGTaGGCAGCATCTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: FLKSSWASCFEILSRAYLLRLGW*AASSGK
Trigger: CTTTCCAGAAGATGCTGCCAACCAACCTAACCTCAA...CAAGTATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAGAACTCTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATGTTTCTTCCACAGTTaGGCCATGGCCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQCFFHS*AMARSL
Trigger: CAAACTCCTGGCCATGGCCAAACTGTGGAAGAAACA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTGTTTCTTCCACAGTTaGGCCATGGCCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVICFFHS*AMARSL
Trigger: CAAACTCCTGGCCATGGCCAAACTGTGGAAGAAACA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GCCCGTGCTCTGTCAATATCACCAAGGATTGTCTCTAATTCAGCGAATTTAATCAAAGTTTGGACTCAGTaGGAAAAACAAATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: ARALSISPRIVSNSANLIKVWTQ*EKQIQQ
Trigger: CTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTTT...GATTAAATTCGCTGAATTAGAGACAATCCTTGGTGATATTGACAGAGCACGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAATCAAAGCGGGCATACTaGATCCAGTTCTTAACATCA +
Preference number: 5 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQSKRAY*IQFLTS
Trigger: TGATGTTAAGAACTGGATCAAGTATGCCCGCTTTGA...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATCTTGGGCATCTTGTTTaGAAATTCTGTCCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: SVNAVEFLLENVSNVSANLGHLV*KFCPGH
Trigger: ATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAG...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp CACTTCTTCTTCGTACTGGAATCTCCGTTTGCTCACAATGATATCTTCAATACCTTGTTCTTTGGACATTaGCCTATGGAAGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: HFFFVLESPFAHNDIFNTLFFGH*PMEVPN
Trigger: ATTGGGAACTTCCATAGGCAAATGTCCAAAGAACAA...GGTATTGAAGATATCATTGTGAGCAAACGGAGATTCCAGTACGAAGAAGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp CTTGTTTTGAAATTCTGTCCAGGGCATACTTGTAAATCACTCGTACCCTTTCAATGGCTAATTCATAGATaGCCCGTGCTCTGTCAATAT +
Preference number: 5 (lower is better)
Translates to: LVLKFCPGHTCKSLVPFQWLIHR*PVLCQY
Trigger: ATATTGACAGAGCACGGGCAATCTATGAATTAGCCA...TTGAAAGGGTACGAGTGATTTACAAGTATGCCCTGGACAGAATTTCAAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490910.5
ENST00000496549.5
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATTGAGGTTAGGTTGGTaGGCAGCATCTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQLRLGW*AASSGK
Trigger: CTTTCCAGAAGATGCTGCCAACCAACCTAACCTCAA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACATCGAGCATGGTTGACTaGGCGATTCTTCATTTCCAT +
Preference number: 5 (lower is better)
Translates to: VNAVEFLLENVSNVSANTSSMVD*AILHFH
Trigger: ATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGA...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTCGAGCATGGTTGACTaGGCGATTCTTCATTTCCAT +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVISSMVD*AILHFH
Trigger: ATGGAAATGAAGAATCGCCAAGTCAACCATGCTCGA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCCTTGGGCATCTTGTTTaGAAATTCTGTCCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVILGHLV*KFCPGH
Trigger: ATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAG...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAACTTGGGCATCTTGTTTaGAAATTCTGTCCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQLGHLV*KFCPGH
Trigger: ATGCCCTGGACAGAATTTCAAAACAAGATGCCCAAG...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACATCCTCTCAGGATCCTTaGCCTCCAATTCTTCATAGA +
Preference number: 5 (lower is better)
Translates to: VNAVEFLLENVSNVSANTSSQDP*PPILHR
Trigger: TCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGGA...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATCCTCTCAGGATCCTTaGCCTCCAATTCTTCATAGA +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQSSQDP*PPILHR
Trigger: TCTATGAAGAATTGGAGGCAAAGGATCCTGAGAGGA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATTTCTCTGGCATGAGTTaGTCTACTCTCTCCTTATCT +
Preference number: 5 (lower is better)
Translates to: SVNAVEFLLENVSNVSANFSGMS*STLSLS
Trigger: AGATAAGGAGAGAGTAGACAAACTCATGCCAGAGAA...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TCGGTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATATATTTCGAGCATGGTaGACTTGGCGATTCTTCATT +
Preference number: 5 (lower is better)
Translates to: SVNAVEFLLENVSNVSANIFRAW*TWRFFI
Trigger: AATGAAGAATCGCCAAGTCAACCATGCTCGAAATAT...ATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAACCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATCAAAGCGGGCATACTaGATCCAGTTCTTAACATCA +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQSKRAY*IQFLTS
Trigger: TGATGTTAAGAACTGGATCAAGTATGCCCGCTTTGA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTGGCTAATTCATAGATaGCCCGTGCTCTGTCAATAT +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIWLIHR*PVLCQY
Trigger: ATATTGACAGAGCACGGGCAATCTATGAATTAGCCA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTGGCTAATTCATAGATaGCCCGTGCTCTGTCAATAT +
Preference number: 5 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKWLIHR*PVLCQY
Trigger: ATATTGACAGAGCACGGGCAATCTATGAATTAGCCA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGTTCTCTGGCATGAGTTaGTCTACTCTCTCCTTATCT +
Preference number: 5 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKFSGMS*STLSLS
Trigger: AGATAAGGAGAGAGTAGACAAACTCATGCCAGAGAA...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTTCTCTGGCATGAGTTaGTCTACTCTCTCCTTATCT +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIFSGMS*STLSLS
Trigger: AGATAAGGAGAGAGTAGACAAACTCATGCCAGAGAA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAGACGCAAGGATGTTTTaGTCAACAGCATTTCCCAAA +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQDARMF*STAFPK
Trigger: TTTGGGAAATGCTGTTGACAAAAACATCCTTGCGTC...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496549.5
CDS-3UTR CAA 90 bp ATATGGCAACATTGCTACTGGAGATACATAATGTACAGAAGCCTAACTATAAAGATATTTCGAGCATGGTaGACTTGGCGATTCTTCATT +
Preference number: 5 (lower is better)
Translates to: IWQHCYWRYIMYRSLTIKIFRAW*TWRFFI
Trigger: AATGAAGAATCGCCAAGTCAACCATGCTCGAAATAT...CTTTATAGTTAGGCTTCTGTACATTATGTATCTCCAGTAGCAATGTTGCCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTACTGGAATCTCCGTTaGCTCACAATGATATCTTCA +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIYWNLR*LTMISS
Trigger: TGAAGATATCATTGTGAGCAAACGGAGATTCCAGTA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATACTGGAATCTCCGTTaGCTCACAATGATATCTTCA +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQYWNLR*LTMISS
Trigger: TGAAGATATCATTGTGAGCAAACGGAGATTCCAGTA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACATACTGGAATCTCCGTTaGCTCACAATGATATCTTCA +
Preference number: 5 (lower is better)
Translates to: VNAVEFLLENVSNVSANTYWNLR*LTMISS
Trigger: TGAAGATATCATTGTGAGCAAACGGAGATTCCAGTA...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAATTGTTCTTTGGACATTaGCCTATGGAAGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQLFFGH*PMEVPN
Trigger: ATTGGGAACTTCCATAGGCAAATGTCCAAAGAACAA...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACATTGTTCTTTGGACATTaGCCTATGGAAGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: VNAVEFLLENVSNVSANTLFFGH*PMEVPN
Trigger: ATTGGGAACTTCCATAGGCAAATGTCCAAAGAACAA...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCTTGTTCTTTGGACATTaGCCTATGGAAGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVILFFGH*PMEVPN
Trigger: ATTGGGAACTTCCATAGGCAAATGTCCAAAGAACAA...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAAAAGTTTGGACTCAGTaGGAAAAACAAATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQKVWTQ*EKQIQQ
Trigger: CTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTTT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCAAAGTTTGGACTCAGTaGGAAAAACAAATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIKVWTQ*EKQIQQ
Trigger: CTGCTGGATTTGTTTTTCCAACTGAGTCCAAACTTT...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp GTTAATGCAGTTGAATTTTTGCTTGAGAATGTGAGCAACGTATCAGCAAATACACAATATCACCAAGGATaGTCTCTAATTCAGCGAATT +
Preference number: 5 (lower is better)
Translates to: VNAVEFLLENVSNVSANTQYHQG*SLIQRI
Trigger: AATTCGCTGAATTAGAGACAATCCTTGGTGATATTG...TGTATTTGCTGATACGTTGCTCACATTCTCAAGCAAAAATTCAACTGCATTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCCAATATCACCAAGGATaGTCTCTAATTCAGCGAATT +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVIQYHQG*SLIQRI
Trigger: AATTCGCTGAATTAGAGACAATCCTTGGTGATATTG...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TGGGACATCATTTTTCATAGCACACACGTGAACAAGCCATTATTCTTTAAACAAAATGCAGTTGAATTTTaGCTTGAGAATGTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: WDIIFHSTHVNKPLFFKQNAVEF*LENVSN
Trigger: GTTGCTCACATTCTCAAGCAAAAATTCAACTGCATT...TTGTTTAAAGAATAATGGCTTGTTCACGTGTGTGCTATGAAAAATGATGTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCAATGCAGTTGAATTTTaGCTTGAGAATGTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVINAVEF*LENVSN
Trigger: GTTGCTCACATTCTCAAGCAAAAATTCAACTGCATT...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
ENST00000536226.2
CDS-3UTR CAA 90 bp TTTACTGAGCACTTACTATGCACCCACCAGGTATATTCCTTTTATAATGTAATCAATCTGGATGTGTTTTaGTCAACAGCATTTCCCAAA +
Preference number: 5 (lower is better)
Translates to: FTEHLLCTHQVYSFYNVINLDVF*STAFPK
Trigger: TTTGGGAAATGCTGTTGACAAAAACACATCCAGATT...GATTACATTATAAAAGGAATATACCTGGTGGGTGCATAGTAAGTGCTCAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377340.6
CDS GCA 72 bp CCGCTGCTTCCCGGCCGCGGTGGAGGCCGCCATGTCTaGAGCAGTCGACCTCTGGACACCTGTCCCCGGCAC +
Preference number: 6 (lower is better)
Translates to: PLLPGRGGGRHV*SSRPLDTCPRH
Trigger: GTGCCGGGGACAGGTGTCCAGAGGTCGACTGCTGCAGACATGGCGGCCTCCACCGCGGCCGGGAAGCAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS GCA 72 bp CACCGTTTCCATGGTGACCAGGCTGCGCGTCCTCCTTaGGGCAGCGCGTGGAGTGCGGCGTCCTGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: HRFHGDQAARPP*GSAWSAASWSC
Trigger: GCAGCTCCAGGACGCCGCACTCCACGCGCTGCCGCAAGGAGGACGCGCAGCCTGGTCACCATGGAAACGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS TCA 72 bp CAGGGCGCATCCCCAGGTCAGCCTCCGGAACTGGGATaGCCAGGCGAGGACGAGTGGCTCTGTCGAGCCGTG +
Preference number: 6 (lower is better)
Translates to: QGASPGQPPELG*PGEDEWLCRAV
Trigger: CACGGCTCGACAGAGCCACTCGTCCTCGCCTGGTCATCCCAGTTCCGGAGGCTGACCTGGGGATGCGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS CCA 72 bp GCGTCCAGGGCGCATCCCCAGGTCAGCCTCCGGAACTaGGATGACCAGGCGAGGACGAGTGGCTCTGTCGAG +
Preference number: 6 (lower is better)
Translates to: ASRAHPQVSLRN*DDQARTSGSVE
Trigger: CTCGACAGAGCCACTCGTCCTCGCCTGGTCATCCCAGTTCCGGAGGCTGACCTGGGGATGCGCCCTGGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS TCA 72 bp GTCCTGGAGCTGCGGATGAGGTGGGTAACGCCGTGCTaGCTAGCAGCGACGCAAGGACTGCGGTGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: VLELRMRWVTPC*LAATQGLRCRA
Trigger: CGCCCTGCACCGCAGTCCTTGCGTCGCTGCTAGTCAGCACGGCGTTACCCACCTCATCCGCAGCTCCAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
CDS CCA 72 bp GCGGTGGAGGCCGCCATGTCTGCAGCAGTCGACCTCTaGACACCTGTCCCCGGCACGGACGCTAGAAATCGG +
Preference number: 6 (lower is better)
Translates to: AVEAAMSAAVDL*TPVPGTDARNR
Trigger: CCGATTTCTAGCGTCCGTGCCGGGGACAGGTGTCCAGAGGTCGACTGCTGCAGACATGGCGGCCTCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS CCA 72 bp TGGCCACTTTGGGAATCCGCTGCTTCCCGGCCGCGGTaGAGGCCGCCATGTCTGCAGCAGTCGACCTCTGGA +
Preference number: 6 (lower is better)
Translates to: WPLWESAASRPR*RPPCLQQSTSG
Trigger: TCCAGAGGTCGACTGCTGCAGACATGGCGGCCTCCACCGCGGCCGGGAAGCAGCGGATTCCCAAAGTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS GCA 72 bp GGCGAGGACGAGTGGCTCTGTCGAGCCGTGGCGCCCTaGAAGGGAGTAAGAACGGAGCTCCAATCTGGATGT +
Preference number: 6 (lower is better)
Translates to: GEDEWLCRAVAP*KGVRTELQSGC
Trigger: ACATCCAGATTGGAGCTCCGTTCTTACTCCCTTGCAGGGCGCCACGGCTCGACAGAGCCACTCGTCCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377340.6
CDS TCA 72 bp CTTGCAGGACTGACCTTTGACCTCTCGCTTGAGCCGTaGCGGAGGCGGCACCGTTTCCATGGTGACCAGGCT +
Preference number: 6 (lower is better)
Translates to: LAGLTFDLSLEP*RRRHRFHGDQA
Trigger: AGCCTGGTCACCATGGAAACGGTGCCGCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGGTCAGTCCTGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000377340.6
CDS GCA 72 bp GCTTTGTTTTTCACCTTGGCCACTTTGGGAATCCGCTaGTTCCCGGCCGCGGTGGAGGCCGCCATGTCTGCA +
Preference number: 6 (lower is better)
Translates to: ALFFTLATLGIR*FPAAVEAAMSA
Trigger: TGCAGACATGGCGGCCTCCACCGCGGCCGGGAAGCAGCGGATTCCCAAAGTGGCCAAGGTGAAAAACAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS TCA 72 bp ACAGGATCTCGGAACCGGAAGCGGAACTTGCAGGACTaGCCTTTGACCTCTCGCTTGAGCCGTGACGGAGGC +
Preference number: 6 (lower is better)
Translates to: TGSRNRKRNLQD*PLTSRLSRDGG
Trigger: GCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGGTCAGTCCTGCAAGTTCCGCTTCCGGTTCCGAGATCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000377340.6
CDS TCA 72 bp GCTTTGTTTTTCACCTTTGACCTCTCGCTTGAGCCGTaGCGGAGGCGGCACCGTTTCCATGGTGACCAGGCT +
Preference number: 6 (lower is better)
Translates to: ALFFTFDLSLEP*RRRHRFHGDQA
Trigger: AGCCTGGTCACCATGGAAACGGTGCCGCCTCCGTCACGGCTCAAGCGAGAGGTCAAAGGTGAAAAACAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490910.5
CDS TCA 72 bp GTCCTGGAGCTGCGGATGAGGTGGGTAACGCCGTGCTaGCTAGCAGCGACGCAAGGATGTTTTTGTCAACAG +
Preference number: 6 (lower is better)
Translates to: VLELRMRWVTPC*LAATQGCFCQQ
Trigger: CTGTTGACAAAAACATCCTTGCGTCGCTGCTAGTCAGCACGGCGTTACCCACCTCATCCGCAGCTCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496549.5
CDS CAA 90 bp GACCAGGCGAGGACGAGTGGCTCTGTCGAGCCGTGGCGCCTGTTTTaGTCAACAGCATTTCCCAAAGTGTCCTTCTGGAACGTTAGGTTC +
Preference number: 6 (lower is better)
Translates to: DQARTSGSVEPWRLF*STAFPKVSFWNVRF
Trigger: GAACCTAACGTTCCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACAGGCGCCACGGCTCGACAGAGCCACTCGTCCTCGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377327.8
ENST00000490910.5
CDS TCA 72 bp ACACCTGTCCCCGGCACGGACGCTAGAAATCGGCTCTaGGAGCTCACCGAAACCACAAAGCTTTCAGAAAAC +
Preference number: 6 (lower is better)
Translates to: TPVPGTDARNRL*ELTETTKLSEN
Trigger: GTTTTCTGAAAGCTTTGTGGTTTCGGTGAGCTCTCAGAGCCGATTTCTAGCGTCCGTGCCGGGGACAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000536226.2
CDS CAA 90 bp GAGGTGGGTAACGCCGTGCTGACTAGCAGCGACGCAAGGATGTTTTaGTCAACAGCATTTCCCAAAGTGTCCTTCTGGAACGTTAGGTTC +
Preference number: 6 (lower is better)
Translates to: EVGNAVLTSSDARMF*STAFPKVSFWNVRF
Trigger: GAACCTAACGTTCCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACATCCTTGCGTCGCTGCTAGTCAGCACGGCGTTACCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496549.5
CDS CCA 72 bp GGCGCCCTGCAAGGGAGTAAGAACGGAGCTCCAATCTaGATGTGTTTTTGTCAACAGCATTTCCCAAAGTGT +
Preference number: 6 (lower is better)
Translates to: GALQGSKNGAPI*MCFCQQHFPKC
Trigger: ACACTTTGGGAAATGCTGTTGACAAAAACACATCCAGATTGGAGCTCCGTTCTTACTCCCTTGCAGGGCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377340.6
CDS CAA 72 bp AACGCCGTGCTGACTAGCAGCGACGCAAGGATGTTTTaGTCAACAGCATTTCCCAAAGTGTCCTTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: NAVLTSSDARMF*STAFPKVSFWN
Trigger: GTTCCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACATCCTTGCGTCGCTGCTAGTCAGCACGGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496549.5
CDS CAA 72 bp CCAAAGTGTCCTTCTGGAACGTTAGGTTCTCCACTGTaGCCGTCATTAGAGATTCTCTTCCCAAAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: PKCPSGTLGSPL*PSLEILFPKSV
Trigger: GACACTCTTTGGGAAGAGAATCTCTAATGACGGCAACAGTGGAGAACCTAACGTTCCAGAAGGACACTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377327.8
ENST00000377340.6
ENST00000490910.5
ENST00000496549.5
CDS CCA 72 bp GTGTTTTTGTCAACAGCATTTCCCAAAGTGTCCTTCTaGAACGTTAGGTTCTCCACTGTTGCCGTCATTAGA +
Preference number: 6 (lower is better)
Translates to: VFLSTAFPKVSF*NVRFSTVAVIR
Trigger: TCTAATGACGGCAACAGTGGAGAACCTAACGTTCCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377340.6
CDS CCA 72 bp ATGTTTTTGTCAACAGCATTTCCCAAAGTGTCCTTCTaGAACGTTAGGTTCTCCACTGTTGCCGTCATTAGA +
Preference number: 6 (lower is better)
Translates to: MFLSTAFPKVSF*NVRFSTVAVIR
Trigger: TCTAATGACGGCAACAGTGGAGAACCTAACGTTCCAGAAGGACACTTTGGGAAATGCTGTTGACAAAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496549.5