RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRMP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000072832

Ensembl transcript IDs: ENST00000324989.12, ENST00000397890.6, ENST00000506216.5, ENST00000511535.1, ENST00000512574.1, ENST00000513911.5

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGATGTGGAGGATGCTTCTCTGCAACCTAGTGCAAGGCTTCCCCTaGCATTCCGAGAATTCACGGATCTCACAGGTGGAGGTGGGGCGA +
Preference number: 1 (lower is better)
Translates to: RMWRMLLCNLVQGFP*HSENSRISQVEVGR
Trigger: TCGCCCCACCTCCACCTGTGAGATCCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR CCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTaGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAATT +
Preference number: 1 (lower is better)
Translates to: APQGLRSRHRVSVSP*RCPLRRTHRLAYVI
Trigger: AATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR TCA 90 bp GTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTaGGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCC +
Preference number: 1 (lower is better)
Translates to: VNIFTVRVLGLPLRA*GLGIVSQSVLGDVP
Trigger: GGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR TCA 90 bp GAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACCAGGGTTTCTaGCACAGGATGTGGAGGATGCTTCTCTGCAACCTAGTGCAAGGC +
Preference number: 1 (lower is better)
Translates to: EDSTVSYKCHGDQGF*HRMWRMLLCNLVQG
Trigger: GCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGGTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR GCA 90 bp TCCCCTCAGACGCACTCACAGACTTGCATACGTAATTTAGTAACATaGATCAACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACC +
Preference number: 1 (lower is better)
Translates to: SPQTHSQTCIRNLVT*INYPRTSTGCKGTT
Trigger: GGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGTTACTAAATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR CCA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCATCGTCAGCCCCGAATaGGGATGGGGAGACCTCTTT +
Preference number: 2 (lower is better)
Translates to: STASEGPGLRPRRGSHQPIVSPE*GWGDLF
Trigger: AAAGAGGTCTCCCCATCCCCATTCGGGGCTGACGAT...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR-3UTR TCA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCAGCCTAGAGCTGGCTTaGAGAACACACACAGACCAG +
Preference number: 2 (lower is better)
Translates to: STASEGPGLRPRRGSHQPSLELA*RTHTDQ
Trigger: CTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCT...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR-3UTR CCA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCAGCTTCTTTCTAGTGTaGACCAGAGGTGGGGGCAAT +
Preference number: 2 (lower is better)
Translates to: STASEGPGLRPRRGSHQPSFFLV*TRGGGN
Trigger: ATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCT...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR-3UTR TCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTACTAGGAAGGGGGAATaGAAACACCATGCTCCGAGG +
Preference number: 2 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCTRKGE*KHHAPR
Trigger: CCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGT...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR CAA 90 bp TGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTaGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAAT +
Preference number: 2 (lower is better)
Translates to: CPSGLEVSASCLSQS*AMSPQTHSQTCIRN
Trigger: ATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR GCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTAGAACATCTACAGGGTaGAAAGGAACCACCACTCAG +
Preference number: 2 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCRTSTG*KGTTTQ
Trigger: CTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCT...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR CAA 90 bp AGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTaGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCC +
Preference number: 2 (lower is better)
Translates to: SKHLHCKGFGTAPQG*RSRHRVSVSPWRCP
Trigger: GGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR TCA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTGAAAAGGGATGGACATaGTTCCCAGAATCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPEKGWT*FPESFR
Trigger: CCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTC...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR TCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAGAAAAGGGATGGACATaGTTCCCAGAATCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSEKGWT*FPESFR
Trigger: CCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTC...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR GCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTGGAATGAAAACACCATaGTCCGAGGTGGATTCAGCA +
Preference number: 2 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPGMKTP*SEVDSA
Trigger: TGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCC...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR GCA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCACGCACTCACAGACTTaGATACGTAATTTAGTAACA +
Preference number: 2 (lower is better)
Translates to: STASEGPGLRPRRGSHQPTHSQT*IRNLVT
Trigger: TGTTACTAAATTACGTATGCAAGTCTGTGAGTGCGT...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR-3UTR CCA 90 bp CCTAGAGCTGGCTTGAAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACCACGGATCTCACAGGTaGAGGTGGGGCGAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: PRAGLKNTHRPEDSTVSYHGSHR*RWGELL
Trigger: AAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGTG...GTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR-3UTR TCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTGGGTTTCAAAAACACTaGCAGGAAAAGGGATGGACA +
Preference number: 2 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPGFQKH*QEKGWT
Trigger: TGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCC...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR TCA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAGAGGTGGATTCAGCATaGACACAACTGTGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVEVDSA*TQLWGK
Trigger: CTTGCCCCACAGTTGTGTTCATGCTGAATCCACCTC...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR TCA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGGAGGTGGATTCAGCATaGACACAACTGTGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: QRNHHSENHGASGVRSGREVDSA*TQLWGK
Trigger: CTTGCCCCACAGTTGTGTTCATGCTGAATCCACCTC...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR TCA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGACTAGGAAGGGGGAATaGAAACACCATGCTCCGAGG +
Preference number: 2 (lower is better)
Translates to: QRNHHSENHGASGVRSGRTRKGE*KHHAPR
Trigger: CCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGT...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR TCA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAGGGTTTCAAAAACACTaGCAGGAAAAGGGATGGACA +
Preference number: 2 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVGFQKH*QEKGWT
Trigger: TGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCC...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR GCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTACGCACTCACAGACTTaGATACGTAATTTAGTAACA +
Preference number: 2 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPTHSQT*IRNLVT
Trigger: TGTTACTAAATTACGTATGCAAGTCTGTGAGTGCGT...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR CCA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCACCAACTAAAACTGTaGGTTTCAAAAACACTGACA +
Preference number: 2 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPHQLKL*VSKTLT
Trigger: TGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTG...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR GCA 90 bp TGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACTGTAAGGGTTTTGGGAGAACATCTACAGGGTaGAAAGGAACCACCACTCAG +
Preference number: 2 (lower is better)
Translates to: CGPEVGAMSKHLHCKGFGRTSTG*KGTTTQ
Trigger: CTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCT...CCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR-3UTR TCA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCGGGTTTCAAAAACACTaGCAGGAAAAGGGATGGACA +
Preference number: 2 (lower is better)
Translates to: VPLLPKQKRERASFDFPLGFQKH*QEKGWT
Trigger: TGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCC...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR-3UTR CCA 90 bp CCTAGAGCTGGCTTGAAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACCACCAACTAAAACTGTaGGTTTCAAAAACACTGACA +
Preference number: 2 (lower is better)
Translates to: PRAGLKNTHRPEDSTVSYHQLKL*VSKTLT
Trigger: TGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTG...GTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR-3UTR CCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCCACCAACTAAAACTGTaGGTTTCAAAAACACTGACA +
Preference number: 2 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSHQLKL*VSKTLT
Trigger: TGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTG...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR CCA 72 bp GGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTaGCGATGTCCCCTCAGACGCACTCACAGACTTGCA +
Preference number: 3 (lower is better)
Translates to: GLRSRHRVSVSP*RCPLRRTHRLA
Trigger: TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR TCA 72 bp TTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTaGGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGC +
Preference number: 3 (lower is better)
Translates to: FTVRVLGLPLRA*GLGIVSQSVLG
Trigger: GCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR CCA 72 bp GCCATTCCGAGAATTCACGGATCTCACAGGTGGAGGTaGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: AIPRIHGSHRWR*GELLSSVDQRW
Trigger: CCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGTGAATTCTCGGAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR CCA 72 bp TCCCCTGCCATTCCGAGAATTCACGGATCTCACAGGTaGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAG +
Preference number: 3 (lower is better)
Translates to: SPAIPRIHGSHR*RWGELLSSVDQ
Trigger: CTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGTGAATTCTCGGAATGGCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR GCA 72 bp AGGATGCTTCTCTGCAACCTAGTGCAAGGCTTCCCCTaGCATTCCGAGAATTCACGGATCTCACAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: RMLLCNLVQGFP*HSENSRISQVE
Trigger: CTCCACCTGTGAGATCCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR GCA 72 bp TCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTaGATACGTAATTTAGTAACATGCATCAACTATCCT +
Preference number: 3 (lower is better)
Translates to: SLAMSPQTHSQT*IRNLVTCINYP
Trigger: AGGATAGTTGATGCATGTTACTAAATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
3UTR GCA 72 bp ACGCACTCACAGACTTGCATACGTAATTTAGTAACATaGATCAACTATCCTAGAACATCTACAGGGTGCAAA +
Preference number: 3 (lower is better)
Translates to: THSQTCIRNLVT*INYPRTSTGCK
Trigger: TTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGTTACTAAATTACGTATGCAAGTCTGTGAGTGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCTCCGGCCCGCAATGGTaGTGGCCCGGAACACCGCCT +
Preference number: 4 (lower is better)
Translates to: STASEGPGLRPRRGSHQPSGPQW*WPGTPP
Trigger: AGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGA...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR TCA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCGCTCTCCGGGAGAGCTaGCCGCGGAGCCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRALRES*PRSPRA
Trigger: AGCCCTCGGGCTCCGCGGTCAGCTCTCCCGGAGAGC...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS-3UTR CCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGATGCCGCCGTACTTCTaGCGCGGGGTCTGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGMPPYF*RGVCAA
Trigger: CGCGGCGCAGACCCCGCGCCAGAAGTACGGCGGCAT...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS-3UTR CCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGGGCGCCACGATGCGGTaGCCGGTGCGCCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGGATMR*PVRLGL
Trigger: CAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCC...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCGACTGCCCCGTCAACTaGCTCAGAGGGACCAGGACT +
Preference number: 4 (lower is better)
Translates to: STASEGPGLRPRRGSHQPDCPVN*LRGTRT
Trigger: AGTCCTGGTCCCTCTGAGGCAGTTGACGGGGCAGTC...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTGCTCGCTCACGTCGCTaGCCGTGTCCTCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCARSRR*PCPRCL
Trigger: GAGGCAGCGAGGACACGGCCAGCGACGTGAGCGAGC...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS-3UTR TCA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCTCCGGCCCGCAATGGTaGTGGCCCGGAACACCGCCT +
Preference number: 4 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRSGPQW*WPGTPP
Trigger: AGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGA...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCAGGCCCTCGGGACCCGTaGTGCCCATCTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLAGPRDP*CPSPGS
Trigger: GGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCC...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTAGTGGCCGCTGCCTGTaGCCTGCAAGTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPSGRCL*PASPHR
Trigger: CCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACT...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCCAGAAGACAGCACGGTaGGTTACAAGTGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: STASEGPGLRPRRGSHQPQKTAR*VTSATE
Trigger: CTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTG...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGCCGCTGCCTGTGACCTaGAAGTCCCCACAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGPLPVT*KSPQAS
Trigger: ACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGG...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCGGTCTGCTCAGGGCATaGCCCTCGGGACCCGTGATG +
Preference number: 4 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRGLLRA*PSGPVM
Trigger: CATCACGGGTCCCGAGGGCCATGCCCTGAGCAGACC...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTGGTCTGCTCAGGGCATaGCCCTCGGGACCCGTGATG +
Preference number: 4 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPGLLRA*PSGPVM
Trigger: CATCACGGGTCCCGAGGGCCATGCCCTGAGCAGACC...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCATCGGTCCCCAGGCTaGCGGCAATGGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCHRSPG*RQWALQ
Trigger: TTGGAGAGCCCATTGCCGCCAGCCTGGGGACCGATG...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCAAGTGGCCGCTGCCTGTaGCCTGCAAGTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLASGRCL*PASPHR
Trigger: CCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACT...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAACGCCTTCCGCGGAATaGAGCGGCCCATGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSTPSAE*SGPCPC
Trigger: ACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGT...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACTGCCCCTCAGGGCTTaGGGTCTCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSLPLRA*GLGIVS
Trigger: AGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAG...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGTGGCCGTGTCCTCGCTaGCTCCCGGCCCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGWPCPR*LPALAA
Trigger: GGCTGCCAGGGCCGGGAGGCAGCGAGGACACGGCCA...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS-3UTR GCA 90 bp TCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGGGTCCCGCCCACCAGTaGCGCCCTGGTCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SQSVLGDVPSDALTDLHTGPAHQ*RPGPLE
Trigger: TTCCAAGGGACCAGGGCGGCACTGGTGGGCGGGACC...CGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCCCAGCTCTTCAGGTCTaGTCAGGGCATGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRPALQV*SGHGPR
Trigger: CCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGG...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGTGCTCCAGTAATGGGTaGCATCGGTCCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGCSSNG*HRSPGW
Trigger: CCAGCCTGGGGACCGATGGCACCCATTACTGGAGCA...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACCGCTGCCTGTGACCTaGAAGTCCCCACAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSPLPVT*KSPQAS
Trigger: ACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGG...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAGCCGCAGTCATCCCCTaGGAGGGCTTCTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSAAVIP*EGFCRY
Trigger: GTACCTGCAGAAGCCCTCCCAGGGGATGACTGCGGC...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCTCTGCAGGTACGTGTTaGCATCAATACCTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: STASEGPGLRPRRGSHQPSAGTC*HQYLRE
Trigger: TTCCCGGAGGTATTGATGTCAACACGTACCTGCAGA...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR TCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCATCCTGGCCAGAGCGATaGTGTCGGCTGCACTCTTGC +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSSWPER*CRLHSC
Trigger: GCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGA...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTACTGGTGGAGGTTTCTaGTGGGTGGGGGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCTGGGF*WVGAGV
Trigger: AACACCAGCCCCCACCCATCAGAAACCTCCACCAGT...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCATTCAACCGAGGCTGGTaGTGTTGGAGCGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSFNRGW*CWSGHQ
Trigger: CTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAA...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCGGATTTGGTGTCAGCTaGTTCGTGCCACTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: STASEGPGLRPRRGSHQPGFGVS*FVPLLE
Trigger: TTCGAGAAGTGGCACGAAGCAGCTGACACCAAATCC...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCACCAGCTCTTCAGGTCTaGTCAGGGCATGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLAPALQV*SGHGPR
Trigger: CCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGG...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACGATGCGGTGGCCGGTaGGCCTGGGATTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSRCGGR*AWDCCH
Trigger: ATGACAACAATCCCAGGCGCACCGGCCACCGCATCG...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTGCGGGATGCTCTTCTTaGCCTGGTACGACATGGCCC +
Preference number: 4 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPAGCSS*PGTTWP
Trigger: GGGCCATGTCGTACCAGGGCAAGAAGAGCATCCCGC...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397890.6
3UTR CAA 72 bp GGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTaGGCGATGTCCCCTCAGACGCACTCACAGACTTGC +
Preference number: 4 (lower is better)
Translates to: GLEVSASCLSQS*AMSPQTHSQTC
Trigger: GCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGGGCCCTCGGGACCCGTaGTGCCCATCTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGGPRDP*CPSPGS
Trigger: GGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCC...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGCCCTGGGAGGGCTTCTaGAGGTACGTGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGPWEGF*RYVLTS
Trigger: TGATGTCAACACGTACCTGCAGAAGCCCTCCCAGGG...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACGGTCCCGCCCACCAGTaGCGCCCTGGTCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDGPAHQ*RPGPLE
Trigger: TTCCAAGGGACCAGGGCGGCACTGGTGGGCGGGACC...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGGTGCAAGGCTTCCCCTaGCATTCCGAGAATTCACGG +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGVQGFP*HSENSR
Trigger: CCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCAC...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp TCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGCATCGGTCCCCAGGCTaGCGGCAATGGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SQSVLGDVPSDALTDLHTHRSPG*RQWALQ
Trigger: TTGGAGAGCCCATTGCCGCCAGCCTGGGGACCGATG...CGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTGGTGGCCGGTGCGCCTaGGATTGTTGTCATCTATCT +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCGGRCA*DCCHLS
Trigger: AGATAGATGACAACAATCCCAGGCGCACCGGCCACC...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGGGCGCCACGATGCGGTaGCCGGTGCGCCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLRGATMR*PVRLGL
Trigger: CAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCC...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAGCGGGGCTGTCTGACTaGAACCGGCGCTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTAGLSD*NRRSRP
Trigger: GGGCCGAGAGCGCCGGTTCCAGTCAGACAGCCCCGC...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397890.6
CDS-3UTR TCA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGGGCCCTCGGGACCCGTaGTGCCCATCTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLRGPRDP*CPSPGS
Trigger: GGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCC...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTGGGCACCTGATAAGCTaGAGTTGGACTGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPGHLIS*SWTGGG
Trigger: ACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCC...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCGGGCACCTGATAAGCTaGAGTTGGACTGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRGHLIS*SWTGGG
Trigger: ACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCC...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACTGCCCCTCAGGGCTTaGGGTCTCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: CLSQSLAMSPQTHSQTCILPLRA*GLGIVS
Trigger: AGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAG...TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp CCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCAACCTGCGGGGCTGTCTaGCTGGAACCGGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PRTSTGCKGTTTQRIMEPTCGAV*LEPALS
Trigger: CGAGAGCGCCGGTTCCAGTCAGACAGCCCCGCAGGT...TGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397890.6
CDS-3UTR GCA 90 bp TGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACTGTAAGGGTTTTGGGCCACCGCGGCGAACATaGCGCCGTACTTCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: CGPEVGAMSKHLHCKGFGPPRRT*RRTSGA
Trigger: CGCGCCAGAAGTACGGCGGCATGTTCGCCGCGGTGG...CCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS-3UTR GCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTCCCTGGGAGGGCTTCTaGAGGTACGTGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPPWEGF*RYVLTS
Trigger: TGATGTCAACACGTACCTGCAGAAGCCCTCCCAGGG...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACTGTAAGGGTTTTGGGGGTCCCGCCCACCAGTaGCGCCCTGGTCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: CGPEVGAMSKHLHCKGFGGPAHQ*RPGPLE
Trigger: TTCCAAGGGACCAGGGCGGCACTGGTGGGCGGGACC...CCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCGTGCAAGGCTTCCCCTaGCATTCCGAGAATTCACGG +
Preference number: 4 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRVQGFP*HSENSR
Trigger: CCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCAC...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGACGGTGAGTTACAAGTaGCACGGAGACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGTVSYK*HGDQGF
Trigger: GAAACCCTGGTCTCCGTGGCACTTGTAACTCACCGT...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAAGGAGTCGGTCACTCTaGCCATTGTCCCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVRSRSL*PLSRPR
Trigger: CCTCGGCCGGGACAATGGCCAGAGTGACCGACTCCT...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS-3UTR CCA 90 bp TGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACATCGGTCCCCAGGCTaGCGGCAATGGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: CLSQSLAMSPQTHSQTCIHRSPG*RQWALQ
Trigger: TTGGAGAGCCCATTGCCGCCAGCCTGGGGACCGATG...TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCTGATTTTGACGCGCTaGTACAGGTGCTCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPLILTR*YRCSGN
Trigger: GTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAG...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTCTGATTTTGACGCGCTaGTACAGGTGCTCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPLILTR*YRCSGN
Trigger: GTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAG...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGCTGATGGGTGGGGGCTaGTGTTTAGAAGGCGAAGAT +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGLMGGG*CLEGED
Trigger: ATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAG...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCTGAAGTTGGACTGGTaGAGGTTTCTGATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCLKLDW*RFLMGG
Trigger: CCCACCCATCAGAAACCTCCACCAGTCCAACTTCAG...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCAGTCTCAGTCAGTCCTTaGCGATGTCCCCTCAGACGC +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLAVSVSP*RCPLRR
Trigger: GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGAC...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGTCTGCAGGTACGTGTTaGCATCAATACCTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGSAGTC*HQYLRE
Trigger: TTCCCGGAGGTATTGATGTCAACACGTACCTGCAGA...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR TCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCACATCGTACCAGCTTGTaGTGTCCACGTGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLAHRTSL*CPRGGS
Trigger: ACTCCCTCCACGTGGACATCACAAGCTGGTACGATG...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTTCCACCGCCGACTTGTaGCTTTTGGCTGTTATGGTC +
Preference number: 4 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPSTADL*LLAVMV
Trigger: GACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGA...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTGAGGTGGATTCAGCATaGACACAACTGTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPEVDSA*TQLWGK
Trigger: CTTGCCCCACAGTTGTGTTCATGCTGAATCCACCTC...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTACTAGGAAGGGGGAATaGAAACACCATGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPTRKGE*KHHAPR
Trigger: CCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGT...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCCCTCGGCCCGGCCGCTaGCCTGCGGGGCTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: KHTTLVPLLPKQKRERASPRPGR*PAGLSD
Trigger: GTCAGACAGCCCCGCAGGTCAGCGGCCGGGCCGAGG...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397890.6
CDS-3UTR GCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTGTGTCAGCTGCTTCGTaGCACTTCTCGAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPVSAAS*HFSKEV
Trigger: GACCTCTTTCGAGAAGTGGCACGAAGCAGCTGACAC...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTGGATTTGGTGTCAGCTaGTTCGTGCCACTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCGFGVS*FVPLLE
Trigger: TTCGAGAAGTGGCACGAAGCAGCTGACACCAAATCC...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACCCAGCTCTTCAGGTCTaGTCAGGGCATGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDPALQV*SGHGPR
Trigger: CCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGG...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGATGCGGTGGCCGGTaGGCCTGGGATTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: CLSQSLAMSPQTHSQTCIRCGGR*AWDCCH
Trigger: ATGACAACAATCCCAGGCGCACCGGCCACCGCATCG...TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTTGGAGGATGCTTCTCTaGAACCTAGTGCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCWRMLL*NLVQGF
Trigger: GAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCA...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCAAGGCGTCGAAGTCGATaGTCTTGTTCTCGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLARRRSR*SCSRRR
Trigger: GCGCCTACGAGAACAAGACCATCGACTTCGACGCCT...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS-3UTR CCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGAAGAGGTCAGTAGGCTaGACCCAGGTTCAGGAACAA +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGKRSVG*TQVQEQ
Trigger: TTGTTCCTGAACCTGGGTCCAGCCTACTGACCTCTT...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTAGCTTCTTTCTAGTGTaGACCAGAGGTGGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCSFFLV*TRGGGN
Trigger: ATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCT...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
3UTR CAA 72 bp CTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTaGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LHCKGFGTAPQG*RSRHRVSVSPW
Trigger: CCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGACGCCTTCCGCGGAATaGAGCGGCCCATGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLRTPSAE*SGPCPC
Trigger: ACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGT...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCAGAGGTGGGGGCAATaGGTAAACATCTTCACTGTA +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCQRWGQ*VNIFTV
Trigger: TACAGTGAAGATGTTTACTCATTGCCCCCACCTCTG...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGTGCTCCAGTAATGGGTaGCATCGGTCCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGCSSNG*HRSPGW
Trigger: CCAGCCTGGGGACCGATGGCACCCATTACTGGAGCA...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGAGAACATCTACAGGGTaGAAAGGAACCACCACTCAG +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGRTSTG*KGTTTQ
Trigger: CTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCT...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACGACTGCCCCGTCAACTaGCTCAGAGGGACCAGGACT +
Preference number: 4 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDDCPVN*LRGTRT
Trigger: AGTCCTGGTCCCTCTGAGGCAGTTGACGGGGCAGTC...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTAATCACAGCAGGATTTaGTGTCAGCTGCTTCGTGCC +
Preference number: 4 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPNHSRI*CQLLRA
Trigger: GGCACGAAGCAGCTGACACCAAATCCTGCTGTGATT...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGATATTTGGGTGTAGCTaGTACCTCGTACACAGGACC +
Preference number: 4 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGIFGCS*YLVHRT
Trigger: GGTCCTGTGTACGAGGTACCAGCTACACCCAAATAT...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTAAGCTGAAGTTGGACTaGTGGAGGTTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCKLKLD*WRFLMG
Trigger: ACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTT...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGGGTGGCCGGTGCGCCTaGGATTGTTGTCATCTATCT +
Preference number: 4 (lower is better)
Translates to: SQSVLGDVPSDALTDLHTGGRCA*DCCHLS
Trigger: AGATAGATGACAACAATCCCAGGCGCACCGGCCACC...CGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCAGGCTGGCGCCACGATGCGGTaGCCGGTGCGCCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: SKTLTGKGMDMIPRILQAGATMR*PVRLGL
Trigger: CAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCC...AGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTACACGGATCTCACAGGTaGAGGTGGGGCGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVHGSHR*RWGELL
Trigger: AAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGTG...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp ACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGTGCCCTGGTACGACATaGCCCCCTCTGGCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: TILEHLQGAKEPPLRESWCPGTT*PPLAPS
Trigger: CGAGGGCGCCAGAGGGGGCCATGTCGTACCAGGGCA...CCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397890.6
CDS-3UTR TCA 90 bp TCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGGAACAACATGGTCAATaGTCATCGTGGTCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SQSVLGDVPSDALTDLHTEQHGQ*SSWSRP
Trigger: TGGGCGGGACCACGATGATCATTGACCATGTTGTTC...CGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTACATCGTACCAGCTTGTaGTGTCCACGTGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVHRTSL*CPRGGS
Trigger: ACTCCCTCCACGTGGACATCACAAGCTGGTACGATG...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACATCCTGGCCAGAGCGATaGTGTCGGCTGCACTCTTGC +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTSWPER*CRLHSC
Trigger: GCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGA...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCGAAAAGGGATGGACATaGTTCCCAGAATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRREKGWT*FPESFR
Trigger: CCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTC...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCCTGCCCCTCAGGGCTTaGGGTCTCGGCATCGTGTCT +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSLPLRA*GLGIVS
Trigger: AGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAG...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTCCCAGCGGGCGCGCTaGCAAAGGCCCGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KHTTLVPLLPKQKRERASSQRAR*QRPGRD
Trigger: ATCCCTCCCGGGCCTTTGTCAGCGCGCCCGCTGGGA...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397890.6
CDS-3UTR GCA 90 bp CCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCATGCTCCAGTAATGGGTaGCATCGGTCCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRTSTGCKGTTTQRIMEPCSSNG*HRSPGW
Trigger: CCAGCCTGGGGACCGATGGCACCCATTACTGGAGCA...TGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCCGCTGCCTGTGACCTaGAAGTCCCCACAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VPLLPKQKRERASFDFPLPLPVT*KSPQAS
Trigger: ACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGG...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp ACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGACGCGCTGGTACAGGTaGTCCGGGAACGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TILEHLQGAKEPPLRESWTRWYR*SGNAFR
Trigger: GCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGT...CCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp CCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCACGATGCGGTGGCCGGTaGGCCTGGGATTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PRTSTGCKGTTTQRIMEPRCGGR*AWDCCH
Trigger: ATGACAACAATCCCAGGCGCACCGGCCACCGCATCG...TGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATCAATGACCGGAAATTaGAGATGGGGACACTGTCCC +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLASMTGN*RWGHCP
Trigger: GGGACAGTGTCCCCATCTGCAATTTCCGGTCATTGA...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR GCA 90 bp CCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCACCCTCCACGCATTCATaGATCCCTGGCTCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: PRTSTGCKGTTTQRIMEPPSTHS*IPGSQR
Trigger: CCGCTGAGAGCCAGGGATGCATGAATGCGTGGAGGG...TGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CCA 90 bp TGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACTGATTTTGACGCGCTaGTACAGGTGCTCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: CLSQSLAMSPQTHSQTCILILTR*YRCSGN
Trigger: GTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAG...TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCAAGCTGAAGTTGGACTaGTGGAGGTTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRKLKLD*WRFLMG
Trigger: ACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTT...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGGTCTCAGTCAGTCCTTaGCGATGTCCCCTCAGACGC +
Preference number: 4 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGVSVSP*RCPLRR
Trigger: GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGAC...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCAAGCTTCTTTCTAGTGTaGACCAGAGGTGGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLASFFLV*TRGGGN
Trigger: ATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCT...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAATCGTCAGCCCCGAATaGGGATGGGGAGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVIVSPE*GWGDLF
Trigger: AAAGAGGTCTCCCCATCCCCATTCGGGGCTGACGAT...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR TCA 90 bp TGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATAAGGCGAAGATTTGGCTaGAGGAGCGGGAGTTGCATA +
Preference number: 4 (lower is better)
Translates to: CLSQSLAMSPQTHSQTCIRRRFG*RSGSCI
Trigger: TATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCT...TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGGGGCACCTGATAAGCTaGAGTTGGACTGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGGHLIS*SWTGGG
Trigger: ACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCC...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCTTCAACCGAGGCTGGTaGTGTTGGAGCGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSFNRGW*CWSGHQ
Trigger: CTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAA...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAGGGTTTCAAAAACACTaGCAGGAAAAGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSGFQKH*QEKGWT
Trigger: TGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCC...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCACAGAGGTGGGGGCAATaGGTAAACATCTTCACTGTA +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLAQRWGQ*VNIFTV
Trigger: TACAGTGAAGATGTTTACTCATTGCCCCCACCTCTG...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACCCCTGGGAGGGCTTCTaGAGGTACGTGTTGACATCA +
Preference number: 4 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDPWEGF*RYVLTS
Trigger: TGATGTCAACACGTACCTGCAGAAGCCCTCCCAGGG...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCAGGCTACGCGCTGGTACAGGTaGTCCGGGAACGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SKTLTGKGMDMIPRILQATRWYR*SGNAFR
Trigger: GCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGT...AGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGCAGGACCGTCATACATaGCCCTGGAAACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGQDRHT*PWKPLA
Trigger: TGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTG...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACTGTAAGGGTTTTGGGCGGTCACTCGTGATGTaGGGGATGCTCTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: CGPEVGAMSKHLHCKGFGRSLVM*GMLFLP
Trigger: GGGCAAGAAGAGCATCCCGCACATCACGAGTGACCG...CCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397890.6
CDS-3UTR GCA 90 bp TCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGAAAGCAGCATGGAGATaGCAGGTTCCCCTACACTCT +
Preference number: 4 (lower is better)
Translates to: SQSVLGDVPSDALTDLHTKAAWR*QVPLHS
Trigger: AGAGTGTAGGGGAACCTGGCATCTCCATGCTGCTTT...CGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR GCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTGCAAAACATATTAGCTaGAGCAAAGCAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCAKHIS*SKAAWR
Trigger: TCTCCATGCTGCTTTGCTGCAGCTAATATGTTTTGC...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAGGTTCAGGAACAACATaGTCAATGATCATCGTGGTC +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSGSGTT*SMIIVV
Trigger: GACCACGATGATCATTGACCATGTTGTTCCTGAACC...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGCCAGGCTGGCGGCAATaGGCTCTCCAAAAACTAGGG +
Preference number: 4 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLRPGWRQ*ALQKLG
Trigger: CCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCTGG...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAGACTTTTGGCTGTTATaGTCTTCAACTTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSDFWLL*SSTCRG
Trigger: ACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTC...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTGACTTTTGGCTGTTATaGTCTTCAACTTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPDFWLL*SSTCRG
Trigger: ACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTC...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGGTCTCAGTCAGTCCTTaGCGATGTCCCCTCAGACGC +
Preference number: 4 (lower is better)
Translates to: QRNHHSENHGASGVRSGRVSVSP*RCPLRR
Trigger: GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGAC...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACAGCCCCGAATGGGGATaGGGAGACCTCTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDSPEWG*GDLFLS
Trigger: ACTCAGAAAGAGGTCTCCCCATCCCCATTCGGGGCT...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp CCTAGAGCTGGCTTGAAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACATGCTCTTCTTGCCCTaGTACGACATGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PRAGLKNTHRPEDSTVSYMLFLP*YDMAPS
Trigger: AGAGGGGGCCATGTCGTACCAGGGCAAGAAGAGCAT...GTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397890.6
CDS-3UTR TCA 90 bp TGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATATCTGCAGGTACGTGTTaGCATCAATACCTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: CLSQSLAMSPQTHSQTCISAGTC*HQYLRE
Trigger: TTCCCGGAGGTATTGATGTCAACACGTACCTGCAGA...TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAATCCGGCCCGCAATGGTaGTGGCCCGGAACACCGCCT +
Preference number: 4 (lower is better)
Translates to: FPSKHTTLVPLLPKQKRESGPQW*WPGTPP
Trigger: AGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGA...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp ACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGTCCTGGCCAGAGCGATaGTGTCGGCTGCACTCTTGC +
Preference number: 4 (lower is better)
Translates to: TILEHLQGAKEPPLRESWSWPER*CRLHSC
Trigger: GCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGA...CCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACACTAGGAAGGGGGAATaGAAACACCATGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDTRKGE*KHHAPR
Trigger: CCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGT...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCTTGACGCCTTTGTCCTaGACCAGCACCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPLLPKQKRERASFDFPLLTPLS*TSTSSS
Trigger: GGAGCTGGAGGTGCTGGTGCAGGACAAAGGCGTCAA...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGCAGGACCGTCATACATaGCCCTGGAAACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLRQDRHT*PWKPLA
Trigger: TGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTG...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAAAGAGGTCAGTAGGCTaGACCCAGGTTCAGGAACAA +
Preference number: 4 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVKRSVG*TQVQEQ
Trigger: TTGTTCCTGAACCTGGGTCCAGCCTACTGACCTCTT...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCGGTCTGCTCAGGGCATaGCCCTCGGGACCCGTGATG +
Preference number: 4 (lower is better)
Translates to: KHTTLVPLLPKQKRERASGLLRA*PSGPVM
Trigger: CATCACGGGTCCCGAGGGCCATGCCCTGAGCAGACC...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACGAGGTTTCTGATGGGTaGGGGCTGGTGTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDEVSDG*GLVFRR
Trigger: CCTTCTAAACACCAGCCCCCACCCATCAGAAACCTC...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp CCTAGAGCTGGCTTGAAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACCTGAAGTTGGACTGGTaGAGGTTTCTGATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PRAGLKNTHRPEDSTVSYLKLDW*RFLMGG
Trigger: CCCACCCATCAGAAACCTCCACCAGTCCAACTTCAG...GTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTTTGTTGTCATCTATCTaGGCACCTGATAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPLLSSI*APDKLK
Trigger: CTTCAGCTTATCAGGTGCCCAGATAGATGACAACAA...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGGGTGGCCGGTGCGCCTaGGATTGTTGTCATCTATCT +
Preference number: 4 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLRGGRCA*DCCHLS
Trigger: AGATAGATGACAACAATCCCAGGCGCACCGGCCACC...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CCTAGAGCTGGCTTGAAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACTCTCACAGGTGGAGGTaGGGCGAGCTTCTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PRAGLKNTHRPEDSTVSYSHRWR*GELLSS
Trigger: ACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA...GTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp CCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCAAGCCCCGAATGGGGATaGGGAGACCTCTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PRTSTGCKGTTTQRIMEPSPEWG*GDLFLS
Trigger: ACTCAGAAAGAGGTCTCCCCATCCCCATTCGGGGCT...TGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAATCGTCAGCCCCGAATaGGGATGGGGAGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTIVSPE*GWGDLF
Trigger: AAAGAGGTCTCCCCATCCCCATTCGGGGCTGACGAT...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACCGGAAATTGCAGATaGGGACACTGTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTTGNCR*GHCPSP
Trigger: TGGGGAGGGACAGTGTCCCCATCTGCAATTTCCGGT...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR TCA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCATCGTACCAGCTTGTaGTGTCCACGTGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: VPLLPKQKRERASFDFPLHRTSL*CPRGGS
Trigger: ACTCCCTCCACGTGGACATCACAAGCTGGTACGATG...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGTGGCCGCTGCCTGTaGCCTGCAAGTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FPSKHTTLVPLLPKQKRESGRCL*PASPHR
Trigger: CCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACT...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTACGCCTTCCGCGGAATaGAGCGGCCCATGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILTPSAE*SGPCPC
Trigger: ACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGT...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGGAGGTGGATTCAGCATaGACACAACTGTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLREVDSA*TQLWGK
Trigger: CTTGCCCCACAGTTGTGTTCATGCTGAATCCACCTC...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAAGCCTAGAGCTGGCTTaGAGAACACACACAGACCAG +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTSLELA*RTHTDQ
Trigger: CTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCT...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAACGCGCTGGTACAGGTaGTCCGGGAACGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: FPSKHTTLVPLLPKQKRETRWYR*SGNAFR
Trigger: GCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGT...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCCAGGACCGTCATACATaGCCCTGGAAACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSQDRHT*PWKPLA
Trigger: TGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTG...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATAGGAATGAAAACACCATaGTCCGAGGTGGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: CLSQSLAMSPQTHSQTCIGMKTP*SEVDSA
Trigger: TGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCC...TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTACGCACTCACAGACTTaGATACGTAATTTAGTAACA +
Preference number: 4 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCTHSQT*IRNLVT
Trigger: TGTTACTAAATTACGTATGCAAGTCTGTGAGTGCGT...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGTGGAGGATGCTTCTCTaGAACCTAGTGCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGWRMLL*NLVQGF
Trigger: GAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCA...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp TGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATATCTCCATTTTCTGCATaGACCAAGATCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CLSQSLAMSPQTHSQTCISPFSA*TKITAP
Trigger: GGGAGCTGTGATCTTGGTCCATGCAGAAAATGGAGA...TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCAAATCCGCCCTTTCCTTaGGTACAGGTTAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLANPPFP*VQVKDL
Trigger: AAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATT...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAATATTTGGGTGTAGCTaGTACCTCGTACACAGGACC +
Preference number: 4 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVIFGCS*YLVHRT
Trigger: GGTCCTGTGTACGAGGTACCAGCTACACCCAAATAT...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACACTGATGGGTGGGGGCTaGTGTTTAGAAGGCGAAGAT +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTLMGGG*CLEGED
Trigger: ATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAG...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACTGTAAGGGTTTTGGGGAGGTTTCTGATGGGTaGGGGCTGGTGTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: CGPEVGAMSKHLHCKGFGEVSDG*GLVFRR
Trigger: CCTTCTAAACACCAGCCCCCACCCATCAGAAACCTC...CCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAGAGGTTTCTGATGGGTaGGGGCTGGTGTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTEVSDG*GLVFRR
Trigger: CCTTCTAAACACCAGCCCCCACCCATCAGAAACCTC...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATTGTTGTCATCTATCTaGGCACCTGATAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLALLSSI*APDKLK
Trigger: CTTCAGCTTATCAGGTGCCCAGATAGATGACAACAA...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCTCCACCGCCGACTTGTaGCTTTTGGCTGTTATGGTC +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSSTADL*LLAVMV
Trigger: GACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGA...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCAGGCGAAGATTTGGCTaGAGGAGCGGGAGTTGCATA +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSRRRFG*RSGSCI
Trigger: TATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCT...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCAACCGAGGCTGGTaGTGTTGGAGCGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: KHTTLVPLLPKQKRERASFNRGW*CWSGHQ
Trigger: CTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAA...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCGTGTCAGCTGCTTCGTaGCACTTCTCGAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VPLLPKQKRERASFDFPLVSAAS*HFSKEV
Trigger: GACCTCTTTCGAGAAGTGGCACGAAGCAGCTGACAC...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCAGGCTTTGACGCCTTTGTCCTaGACCAGCACCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKTLTGKGMDMIPRILQALTPLS*TSTSSS
Trigger: GGAGCTGGAGGTGCTGGTGCAGGACAAAGGCGTCAA...AGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAACGCACTCACAGACTTaGATACGTAATTTAGTAACA +
Preference number: 4 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSTHSQT*IRNLVT
Trigger: TGTTACTAAATTACGTATGCAAGTCTGTGAGTGCGT...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCAAATCACAGCAGGATTTaGTGTCAGCTGCTTCGTGCC +
Preference number: 4 (lower is better)
Translates to: PRTSTGCKGTTTQRIMEPNHSRI*CQLLRA
Trigger: GGCACGAAGCAGCTGACACCAAATCCTGCTGTGATT...TGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGAATCCGCCCTTTCCTTaGGTACAGGTTAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: SQSVLGDVPSDALTDLHTNPPFP*VQVKDL
Trigger: AAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATT...CGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACACGTCATACATGCCCCTaGAAACCCCTTGCAATCCAA +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTRHTCP*KPLAIQ
Trigger: TTGGATTGCAAGGGGTTTCCAGGGGCATGTATGACG...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCCTGATGGGTGGGGGCTaGTGTTTAGAAGGCGAAGAT +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSLMGGG*CLEGED
Trigger: ATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAG...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCCTGAAGTTGGACTGGTaGAGGTTTCTGATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSLKLDW*RFLMGG
Trigger: CCCACCCATCAGAAACCTCCACCAGTCCAACTTCAG...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCTCTCACAGGTGGAGGTaGGGCGAGCTTCTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSSHRWR*GELLSS
Trigger: ACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCTGCAGCAAAGCAGCATaGAGATGCCAGGTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: VPLLPKQKRERASFDFPLCSKAA*RCQVPL
Trigger: TAGGGGAACCTGGCATCTCCATGCTGCTTTGCTGCA...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR TCA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCACTGGTGGAGGTTTCTaGTGGGTGGGGGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KHTTLVPLLPKQKRERASTGGGF*WVGAGV
Trigger: AACACCAGCCCCCACCCATCAGAAACCTCCACCAGT...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGGAAAAGGGATGGACATaGTTCCCAGAATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QRNHHSENHGASGVRSGREKGWT*FPESFR
Trigger: CCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTC...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGGAAAAGGGATGGACATaGTTCCCAGAATCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLREKGWT*FPESFR
Trigger: CCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTC...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACGGGTTTCAAAAACACTaGCAGGAAAAGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDGFQKH*QEKGWT
Trigger: TGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCC...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTTTGACGCCTTTGTCCTaGACCAGCACCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILLTPLS*TSTSSS
Trigger: GGAGCTGGAGGTGCTGGTGCAGGACAAAGGCGTCAA...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGGGAATGAAAACACCATaGTCCGAGGTGGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: QRNHHSENHGASGVRSGRGMKTP*SEVDSA
Trigger: TGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCC...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCTTTCTGCTTTCAAGTTaGCATCCAGAGCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VPLLPKQKRERASFDFPLFLLSS*HPERGW
Trigger: CCACCCTCGCTCTGGATGGCAACTTGAAAGCAGAAA...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCAAGAGGTCAGTAGGCTaGACCCAGGTTCAGGAACAA +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSKRSVG*TQVQEQ
Trigger: TTGTTCCTGAACCTGGGTCCAGCCTACTGACCTCTT...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACATCTCCATTTTCTGCATaGACCAAGATCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTSPFSA*TKITAP
Trigger: GGGAGCTGTGATCTTGGTCCATGCAGAAAATGGAGA...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCCAGGCTGGCGGCAATaGGCTCTCCAAAAACTAGGG +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILPGWRQ*ALQKLG
Trigger: CCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCTGG...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCAAAGCTGAAGTTGGACTaGTGGAGGTTTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: PRTSTGCKGTTTQRIMEPKLKLD*WRFLMG
Trigger: ACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTT...TGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCATCCAGAGCGAGGGTaGCCTAGGCTTGGTACAGCT +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILHPERG*PRLGTA
Trigger: AGCTGTACCAAGCCTAGGCCACCCTCGCTCTGGATG...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR TCA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAGGGTTTCAAAAACACTaGCAGGAAAAGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTGFQKH*QEKGWT
Trigger: TGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCC...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCAGGCTGTGTCAGCTGCTTCGTaGCACTTCTCGAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SKTLTGKGMDMIPRILQAVSAAS*HFSKEV
Trigger: GACCTCTTTCGAGAAGTGGCACGAAGCAGCTGACAC...AGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp CCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCAGGTTCAGGAACAACATaGTCAATGATCATCGTGGTC +
Preference number: 4 (lower is better)
Translates to: PRTSTGCKGTTTQRIMEPGSGTT*SMIIVV
Trigger: GACCACGATGATCATTGACCATGTTGTTCCTGAACC...TGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGAGAGCCACAACAAGTTaGTTGTTAAGTAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: SQSVLGDVPSDALTDLHTRATTS*LLSKNG
Trigger: CCCATTTTTACTTAACAACCAACTTGTTGTGGCTCT...CGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTGCATTCATGCATCCCTaGCTCTCAGCGGGGCCTAAA +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILAFMHP*LSAGPK
Trigger: TTTAGGCCCCGCTGAGAGCCAGGGATGCATGAATGC...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR TCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTAGGCGAAGATTTGGCTaGAGGAGCGGGAGTTGCATA +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILRRRFG*RSGSCI
Trigger: TATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCT...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCGAGGTGGATTCAGCATaGACACAACTGTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: KHTTLVPLLPKQKRERASEVDSA*TQLWGK
Trigger: CTTGCCCCACAGTTGTGTTCATGCTGAATCCACCTC...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAACAGAAGACAGCACGGTaGGTTACAAGTGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: FPSKHTTLVPLLPKQKREQKTAR*VTSATE
Trigger: CTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTG...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTACGGTGAGTTACAAGTaGCACGGAGACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILTVSYK*HGDQGF
Trigger: GAAACCCTGGTCTCCGTGGCACTTGTAACTCACCGT...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGTCGTTGTTCATTTTCTaGATGCGAAATCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: QRNHHSENHGASGVRSGRSLFIF*MRNPTP
Trigger: TGGGGTTGGATTTCGCATGCAGAAAATGAACAACGA...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCGGTTCAGGAACAACATaGTCAATGATCATCGTGGTC +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSGSGTT*SMIIVV
Trigger: GACCACGATGATCATTGACCATGTTGTTCCTGAACC...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTACACCAACTAAAACTGTaGGTTTCAAAAACACTGACA +
Preference number: 4 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVHQLKL*VSKTLT
Trigger: TGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTG...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAATCCACCGCCGACTTGTaGCTTTTGGCTGTTATGGTC +
Preference number: 4 (lower is better)
Translates to: FPSKHTTLVPLLPKQKRESTADL*LLAVMV
Trigger: GACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGA...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAACTAGGAAGGGGGAATaGAAACACCATGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: FPSKHTTLVPLLPKQKRETRKGE*KHHAPR
Trigger: CCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGT...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGCCTAGAGCTGGCTTaGAGAACACACACAGACCAG +
Preference number: 4 (lower is better)
Translates to: FPSKHTTLVPLLPKQKRESLELA*RTHTDQ
Trigger: CTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCT...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTGGATTTGGTGTCAGCTaGTTCGTGCCACTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILGFGVS*FVPLLE
Trigger: TTCGAGAAGTGGCACGAAGCAGCTGACACCAAATCC...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp ACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGTGTTCATTTTCTGCATaGGAAATCCAACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: TILEHLQGAKEPPLRESWCSFSA*EIQPHR
Trigger: CCTGTGGGGTTGGATTTCGCATGCAGAAAATGAACA...CCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CCA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCAATCACAGCAGGATTTaGTGTCAGCTGCTTCGTGCC +
Preference number: 4 (lower is better)
Translates to: KHTTLVPLLPKQKRERASNHSRI*CQLLRA
Trigger: GGCACGAAGCAGCTGACACCAAATCCTGCTGTGATT...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCAATCCGCCCTTTCCTTaGGTACAGGTTAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: VPLLPKQKRERASFDFPLNPPFP*VQVKDL
Trigger: AAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATT...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCCGACTTGTGACTTTTaGCTGTTATGGTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: VPLLPKQKRERASFDFPLPTCDF*LLWSST
Trigger: AGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGG...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCCCGACTTGTGACTTTTaGCTGTTATGGTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSPTCDF*LLWSST
Trigger: AGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGG...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCGTCATACATGCCCCTaGAAACCCCTTGCAATCCAA +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILRHTCP*KPLAIQ
Trigger: TTGGATTGCAAGGGGTTTCCAGGGGCATGTATGACG...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCTTGTTGTCATCTATCTaGGCACCTGATAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSLLSSI*APDKLK
Trigger: CTTCAGCTTATCAGGTGCCCAGATAGATGACAACAA...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACCACCAACTAAAACTGTaGGTTTCAAAAACACTGACA +
Preference number: 4 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDHQLKL*VSKTLT
Trigger: TGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTG...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR GCA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCGGAATGAAAACACCATaGTCCGAGGTGGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: KHTTLVPLLPKQKRERASGMKTP*SEVDSA
Trigger: TGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCC...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTTCTCCATTTTCTGCATaGACCAAGATCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILSPFSA*TKITAP
Trigger: GGGAGCTGTGATCTTGGTCCATGCAGAAAATGGAGA...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCAGGCTGACTTTTGGCTGTTATaGTCTTCAACTTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SKTLTGKGMDMIPRILQADFWLL*SSTCRG
Trigger: ACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTC...AGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTATATTTGGGTGTAGCTaGTACCTCGTACACAGGACC +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILIFGCS*YLVHRT
Trigger: GGTCCTGTGTACGAGGTACCAGCTACACCCAAATAT...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGCACCAACTAAAACTGTaGGTTTCAAAAACACTGACA +
Preference number: 4 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLRHQLKL*VSKTLT
Trigger: TGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTG...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR TCA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAACCCCACAGGTCCTATaGAACTACTCATCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FPSKHTTLVPLLPKQKRETPQVL*NYSSFL
Trigger: CAGAAAAGATGAGTAGTTTCATAGGACCTGTGGGGT...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR GCA 90 bp ACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGACGCACTCACAGACTTaGATACGTAATTTAGTAACA +
Preference number: 4 (lower is better)
Translates to: TILEHLQGAKEPPLRESWTHSQT*IRNLVT
Trigger: TGTTACTAAATTACGTATGCAAGTCTGTGAGTGCGT...CCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCCGACTTGTGACTTTTaGCTGTTATGGTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILPTCDF*LLWSST
Trigger: AGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGG...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR GCA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTACTACTCATCTTTTCTaGTTTCAAGTTGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILTTHLF*FQVAIQ
Trigger: CTGGATGGCAACTTGAAAGCAGAAAAGATGAGTAGT...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CCA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCAGAGCCACAACAAGTTaGTTGTTAAGTAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: KHTTLVPLLPKQKRERASRATTS*LLSKNG
Trigger: CCCATTTTTACTTAACAACCAACTTGTTGTGGCTCT...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS GCA 90 bp GCCCTGGCAGCCCGACCGCGTCGGGCCGGCCAGCGCTGCGCGGCGTaGGCGCCGAGCCGCGGCGGCCCACACTGTAGGCGTCGAAGTCGA +
Preference number: 5 (lower is better)
Translates to: ALAARPRRAGQRCAA*APSRGGPHCRRRSR
Trigger: TCGACTTCGACGCCTACAGTGTGGGCCGCCGCGGCTCGGCGCGCACGCCGCGCAGCGCTGGCCGGCCCGACGCGGTCGGGCTGCCAGGGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS CCA 90 bp AAAGGCCCGGGAGGGATAGAGACACGGACGGAGGCTCGGCGCCCGTaGATGCCCACGCGCGGCTGCCCCGGCTGCTCGGCCCGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: KGPGGIETRTEARRP*MPTRGCPGCSARPP
Trigger: CGGCGGGCGGGCCGAGCAGCCGGGGCAGCCGCGCGTGGGCATCCACGGGCGCCGAGCCTCCGTCCGTGTCTCTATCCCTCCCGGGCCTTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397890.6
ENST00000506216.5
CDS TCA 90 bp GGATGCGCAGCGTCGGCGGCCGCTCGTCGCGCTCTCCGGGAGAGCTaGCCGCGGAGCCCGAGGGCTCGCTCACGTCGCTGGCCGTGTCCT +
Preference number: 5 (lower is better)
Translates to: GCAASAAARRALRES*PRSPRARSRRWPCP
Trigger: AGGACACGGCCAGCGACGTGAGCGAGCCCTCGGGCTCCGCGGTCAGCTCTCCCGGAGAGCGCGACGAGCGGCCGCCGACGCTGCGCATCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS TCA 90 bp TCTGACTGGAACCGGCGCTCTCGGCCCCGCTCCCAGCGGGCGCGCTaGCAAAGGCCCGGGAGGGATAGAGACACGGACGGAGGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: SDWNRRSRPRSQRAR*QRPGRDRDTDGGSA
Trigger: CGCCGAGCCTCCGTCCGTGTCTCTATCCCTCCCGGGCCTTTGTCAGCGCGCCCGCTGGGAGCGGGGCCGAGAGCGCCGGTTCCAGTCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397890.6
ENST00000506216.5
CDS GCA 90 bp ATTCCTTTGTTTCCGGCCACACCCAGGGACGCAGCCCGGCTGTTCTaGCTCCACCACCGTCCCCACCCTCTCGCGGCCCAGCGTCGGGAA +
Preference number: 5 (lower is better)
Translates to: IPLFPATPRDAARLF*LHHRPHPLAAQRRE
Trigger: TTCCCGACGCTGGGCCGCGAGAGGGTGGGGACGGTGGTGGAGGCAGAACAGCCGGGCTGCGTCCCTGGGTGTGGCCGGAAACAAAGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511535.1
CDS CCA 90 bp ATGAGGAGTCGGTCACTCGTGATGTGCGGGATGCTCTTCTTGCCCTaGTACGACATGGCCCCCTCTGGCGCCCTCGGCCCGGCCGCTGAC +
Preference number: 5 (lower is better)
Translates to: MRSRSLVMCGMLFLP*YDMAPSGALGPAAD
Trigger: GTCAGCGGCCGGGCCGAGGGCGCCAGAGGGGGCCATGTCGTACCAGGGCAAGAAGAGCATCCCGCACATCACGAGTGACCGACTCCTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397890.6
ENST00000506216.5
CDS-3UTR CAA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCTGTCTCAGTCAGTCCTaGGCGATGTCCCCTCAGACG +
Preference number: 5 (lower is better)
Translates to: STASEGPGLRPRRGSHQPCLSQS*AMSPQT
Trigger: CGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCAAGGAATTGACGCCTTaGTCCTGCACCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: STASEGPGLRPRRGSHQPKELTP*SCTSTS
Trigger: GGAGGTGCTGGTGCAGGACAAAGGCGTCAATTCCTT...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCGAGGGTGGCCTAGGCTaGGTACAGCTCCCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRREGGLG*VQLPQH
Trigger: GTGCTGGGGGAGCTGTACCAAGCCTAGGCCACCCTC...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CAA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCCCAGTAGCCACCGCCTaGTCCCAGACGACCGTCATC +
Preference number: 5 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRPVATA*SQTTVI
Trigger: GATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGG...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTACTGCCCCTCAGGGCTaGAGGTCTCGGCATCGTGTC +
Preference number: 5 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPTAPQG*RSRHRV
Trigger: GACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGT...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCTTCTGCAGGTACGTGTaGACATCAATACCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: STASEGPGLRPRRGSHQPFCRYV*TSIPPG
Trigger: TCCCGGAGGTATTGATGTCAACACGTACCTGCAGAA...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTATGTACACAGGGCAGTaGATCCGGCCCGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCMYTGQ*IRPAMV
Trigger: CACCATTGCGGGCCGGATCAACTGCCCTGTGTACAT...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCACCAGTAGCCACCGCCTaGTCCCAGACGACCGTCATC +
Preference number: 5 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLAPVATA*SQTTVI
Trigger: GATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGG...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCGGTGCGCCTGGGATaGTTGTCATCTATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCPVRLG*LSSIWA
Trigger: TGCCCAGATAGATGACAACAATCCCAGGCGCACCGG...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAACTGCCTCAGAGGGACCAGGACTCAGGCCACGCAGGGGCAGCCATCAGCCCGTCAGCATAAAGGGATaGGTCATCGTTGATGATCCG +
Preference number: 5 (lower is better)
Translates to: STASEGPGLRPRRGSHQPVSIKG*VIVDDP
Trigger: CGGATCATCAACGATGACCAATCCCTTTATGCTGAC...GGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGGCGGGAGTTGCATATTaGGGTGTAGCTGGTACCTCG +
Preference number: 5 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGAGVAY*GVAGTS
Trigger: CGAGGTACCAGCTACACCCAAATATGCAACTCCCGC...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCCGGTGCGCCTGGGATaGTTGTCATCTATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPPVRLG*LSSIWA
Trigger: TGCCCAGATAGATGACAACAATCCCAGGCGCACCGG...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTATGATCCGTCCACCTTaGATGAGGAGTCGGTCACTC +
Preference number: 5 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCMIRPP*MRSRSL
Trigger: GAGTGACCGACTCCTCATCAAAGGTGGACGGATCAT...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTAAGGAATTGACGCCTTaGTCCTGCACCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPKELTP*SCTSTS
Trigger: GGAGGTGCTGGTGCAGGACAAAGGCGTCAATTCCTT...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGAAGATCTTGGCTGCATaGGTGCTGGTGACAGCGACA +
Preference number: 5 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGKILAA*VLVTAT
Trigger: TGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTT...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCGTGCGCCTGGGATTGTaGTCATCTATCTGGGCACCT +
Preference number: 5 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRVRLGL*SSIWAP
Trigger: AGGTGCCCAGATAGATGACAACAATCCCAGGCGCAC...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAACTGCCCCTCAGGGCTaGAGGTCTCGGCATCGTGTC +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVTAPQG*RSRHRV
Trigger: GACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGT...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS CCA 90 bp GGAAGGGAGAGTGTGATTGATCGACACTGTGCATGTGTGCCCTTCTaGGCAGATAAAGCAGAGCCCTGCGGGCGAGAGAGAAACCTGAGG +
Preference number: 5 (lower is better)
Translates to: GRESVIDRHCACVPF*ADKAEPCGRERNLR
Trigger: CCTCAGGTTTCTCTCTCGCCCGCAGGGCTCTGCTTTATCTGCCCAGAAGGGCACACATGCACAGTGTCGATCAATCACACTCTCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS-3UTR CAA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGCTGGCTGTCGGACATTaGGTAGACATCCTTATAGGC +
Preference number: 5 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGLAVGH*VDILIG
Trigger: GCCTATAAGGATGTCTACCAAATGTCCGACAGCCAG...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACCCAGTAGCCACCGCCTaGTCCCAGACGACCGTCATC +
Preference number: 5 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDPVATA*SQTTVI
Trigger: GATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGG...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTATACCCTCGAAGATGTaGTACTCCACCGCCGACTTG +
Preference number: 5 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPIPSKM*YSTADL
Trigger: CAAGTCGGCGGTGGAGTACAACATCTTCGAGGGTAT...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGACTGCCCCTCAGGGCTaGAGGTCTCGGCATCGTGTC +
Preference number: 5 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGTAPQG*RSRHRV
Trigger: GACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGT...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTGTCAATGACCGGAAATaGCAGATGGGGACACTGTCC +
Preference number: 5 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPVNDRK*QMGTLS
Trigger: GGACAGTGTCCCCATCTGCAATTTCCGGTCATTGAC...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS GCA 90 bp TGCAATCCAAAAACCTTATTCCTGATTTTGACGCGCTGGTACAGGTaGTCCGGGAACGCCTTCCGCGGAATGAAGCGGCCCATGCCCTTG +
Preference number: 5 (lower is better)
Translates to: CNPKTLFLILTRWYR*SGNAFRGMKRPMPL
Trigger: CAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
CDS GCA 90 bp GCAGAGCCCTGCGGGCGAGAGAGAAACCTGAGGTCACTTCAAATGTaGATGCACACACACACACAACACGCACACACGACAGGTGCACTT +
Preference number: 5 (lower is better)
Translates to: AEPCGRERNLRSLQM*MHTHTQHAHTTGAL
Trigger: AAGTGCACCTGTCGTGTGTGCGTGTTGTGTGTGTGTGTGCATGCACATTTGAAGTGACCTCAGGTTTCTCTCTCGCCCGCAGGGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS GCA 90 bp CGACACTGTGCATGTGTGCCCTTCTGGGCAGATAAAGCAGAGCCCTaGGGGCGAGAGAGAAACCTGAGGTCACTTCAAATGTGCATGCAC +
Preference number: 5 (lower is better)
Translates to: RHCACVPFWADKAEP*GRERNLRSLQMCMH
Trigger: GTGCATGCACATTTGAAGTGACCTCAGGTTTCTCTCTCGCCCGCAGGGCTCTGCTTTATCTGCCCAGAAGGGCACACATGCACAGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS-3UTR CAA 90 bp TCTCACAGGTGGAGGTGGGGCGAGCTTCTTTCTAGTGTGGACCAGAGGTGGGGGGTCAGCATAAAGGGATaGGTCATCGTTGATGATCCG +
Preference number: 5 (lower is better)
Translates to: SHRWRWGELLSSVDQRWGVSIKG*VIVDDP
Trigger: CGGATCATCAACGATGACCAATCCCTTTATGCTGAC...CCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TTTGGGACTGCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTTCTGCAGGTACGTGTaGACATCAATACCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: FGTAPQGLRSRHRVSVSPFCRYV*TSIPPG
Trigger: TCCCGGAGGTATTGATGTCAACACGTACCTGCAGAA...AGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAACCTTATTCCTGATTTaGACGCGCTGGTACAGGTGC +
Preference number: 5 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSTLFLI*TRWYRC
Trigger: GCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGT...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCCCTGATAAGCTGAAGTaGGACTGGTGGAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LRSRHRVSVSPWRCPLRRPDKLK*DWWRFL
Trigger: CAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGG...GCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTATGTCTCAGTCAGTCCTaGGCGATGTCCCCTCAGACG +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVCLSQS*AMSPQT
Trigger: CGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAAAGCCTAGAGCTGGCTaGAAGAACACACACAGACCA +
Preference number: 5 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSKPRAG*KNTHRP
Trigger: TGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTT...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCAAGGGATTGGTCATCGTaGATGATCCGTCCACCTTTG +
Preference number: 5 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLARDWSS*MIRPPL
Trigger: CAAAGGTGGACGGATCATCAACGATGACCAATCCCT...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATTCTGCAGGTACGTGTaGACATCAATACCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLAFCRYV*TSIPPG
Trigger: TCCCGGAGGTATTGATGTCAACACGTACCTGCAGAA...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GCCCCTCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTATGCCCTTGTTGACGTaGATGTTTCCGTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: APQGLRSRHRVSVSPWRCMPLLT*MFPSSK
Trigger: CTTTGAAGACGGAAACATCAACGTCAACAAGGGCAT...ACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAAAGCGGCCCATGCCCTaGTTGACGTTGATGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVKRPMP*LTLMFP
Trigger: CGGAAACATCAACGTCAACAAGGGCATGGGCCGCTT...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp CGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCACCTGATAAGCTGAAGTaGGACTGGTGGAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: RVSVSPWRCPLRRTHRLAPDKLK*DWWRFL
Trigger: CAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGG...TGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACTGTCTCAGTCAGTCCTaGGCGATGTCCCCTCAGACG +
Preference number: 5 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDCLSQS*AMSPQT
Trigger: CGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS GCA 90 bp CTCCAAAGCCCGACAGCTGATGATGACTCTGACGGAAAGAATGATTaGAGCCGAAGGGCTATTGTGCGATTCTCAGGAGCTGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: LQSPTADDDSDGKND*SRRAIVRFSGAAGS
Trigger: AGAGCCTGCAGCTCCTGAGAATCGCACAATAGCCCTTCGGCTGCAATCATTCTTTCCGTCAGAGTCATCATCAGCTGTCGGGCTTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAATGATCCGTCCACCTTaGATGAGGAGTCGGTCACTC +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVMIRPP*MRSRSL
Trigger: GAGTGACCGACTCCTCATCAAAGGTGGACGGATCAT...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTATGGTTCTCATCCATTTaGCCAGTAGCCACCGCCTTG +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVWFSSI*PVATAL
Trigger: CAAGGCGGTGGCTACTGGCAAAATGGATGAGAACCA...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTAAAGATCTTGGCTGCATaGGTGCTGGTGACAGCGACA +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVKILAA*VLVTAT
Trigger: TGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTT...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCAATGCCCTTGTTGACGTaGATGTTTCCGTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: VSASCLSQSLAMSPQTHSMPLLT*MFPSSK
Trigger: CTTTGAAGACGGAAACATCAACGTCAACAAGGGCAT...TGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGCCGGTGCGCCTGGGATaGTTGTCATCTATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QRNHHSENHGASGVRSGRPVRLG*LSSIWA
Trigger: TGCCCAGATAGATGACAACAATCCCAGGCGCACCGG...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TGTCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACTCCCTTCCTTGGAGTaGTTAAGTCCTAGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: CLSQSLAMSPQTHSQTCILPSLE*LSPRFP
Trigger: GGGGAACCTAGGACTTAACAACTCCAAGGAAGGGAG...TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS TCA 90 bp GTTTCTGATGGGTGGGGGCTGGTGTTTAGAAGGCGAAGATTTGGCTaGAGGAGCGGGAGTTGCATATTTGGGTGTAGCTGGTACCTCGTA +
Preference number: 5 (lower is better)
Translates to: VSDGWGLVFRRRRFG*RSGSCIFGCSWYLV
Trigger: TACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
ENST00000513911.5
CDS-3UTR CAA 90 bp AAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACAAGTGCCACGGAGACATGATCCGTCCACCTTaGATGAGGAGTCGGTCACTC +
Preference number: 5 (lower is better)
Translates to: KNTHRPEDSTVSYKCHGDMIRPP*MRSRSL
Trigger: GAGTGACCGACTCCTCATCAAAGGTGGACGGATCAT...GTCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TCTCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGCTCCAGGATCCGCTTTaGTTCCTGAGCTATCAAATC +
Preference number: 5 (lower is better)
Translates to: SQSVLGDVPSDALTDLHTLQDPL*FLSYQI
Trigger: GATTTGATAGCTCAGGAACAAAAGCGGATCCTGGAG...CGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACTGTAAGGGTTTTGGGCGGCCCATGCCCTTGTaGACGTTGATGTTTCCGTCT +
Preference number: 5 (lower is better)
Translates to: CGPEVGAMSKHLHCKGFGRPMPL*TLMFPS
Trigger: AGACGGAAACATCAACGTCAACAAGGGCATGGGCCG...CCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGCGGCCCATGCCCTTGTaGACGTTGATGTTTCCGTCT +
Preference number: 5 (lower is better)
Translates to: QRNHHSENHGASGVRSGRRPMPL*TLMFPS
Trigger: AGACGGAAACATCAACGTCAACAAGGGCATGGGCCG...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACTGTAAGGGTTTTGGGAAGCGGCCCATGCCCTaGTTGACGTTGATGTTTCCG +
Preference number: 5 (lower is better)
Translates to: CGPEVGAMSKHLHCKGFGKRPMP*LTLMFP
Trigger: CGGAAACATCAACGTCAACAAGGGCATGGGCCGCTT...CCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp ATGAGTAAACATCTTCACTGTAAGGGTTTTGGGACTGCCCCTCAGGGCTTGAGGGCGGGAGTTGCATATTaGGGTGTAGCTGGTACCTCG +
Preference number: 5 (lower is better)
Translates to: MSKHLHCKGFGTAPQGLRAGVAY*GVAGTS
Trigger: CGAGGTACCAGCTACACCCAAATATGCAACTCCCGC...CCTCAAGCCCTGAGGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp ACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGTGCGGGATGCTCTTCTaGCCCTGGTACGACATGGCC +
Preference number: 5 (lower is better)
Translates to: TILEHLQGAKEPPLRESWCGMLF*PWYDMA
Trigger: GGCCATGTCGTACCAGGGCAAGAAGAGCATCCCGCA...CCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397890.6
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTACCTACACTCCCTTCCTaGGAGTTGTTAAGTCCTAGG +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVPTLPS*ELLSPR
Trigger: CCTAGGACTTAACAACTCCAAGGAAGGGAGTGTAGG...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTATTTTCTGCTTTCAAGTaGCCATCCAGAGCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVFSAFK*PSRARV
Trigger: CACCCTCGCTCTGGATGGCAACTTGAAAGCAGAAAA...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CAA 90 bp CCTAGAGCTGGCTTGAAGAACACACACAGACCAGAAGACAGCACGGTGAGTTACCTGGCTGTCGGACATTaGGTAGACATCCTTATAGGC +
Preference number: 5 (lower is better)
Translates to: PRAGLKNTHRPEDSTVSYLAVGH*VDILIG
Trigger: GCCTATAAGGATGTCTACCAAATGTCCGACAGCCAG...GTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp CCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGAGCCATGGTTCTCATCCATTTaGCCAGTAGCCACCGCCTTG +
Preference number: 5 (lower is better)
Translates to: PRTSTGCKGTTTQRIMEPWFSSI*PVATAL
Trigger: CAAGGCGGTGGCTACTGGCAAAATGGATGAGAACCA...TGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGTGGTTCTCATCCATTTaGCCAGTAGCCACCGCCTTG +
Preference number: 5 (lower is better)
Translates to: QRNHHSENHGASGVRSGRWFSSI*PVATAL
Trigger: CAAGGCGGTGGCTACTGGCAAAATGGATGAGAACCA...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAGTTATGGTCTTCAACTaGTCGGGGTCCCAGATGACC +
Preference number: 5 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTVMVFN*SGSQMT
Trigger: GGTCATCTGGGACCCCGACAAGTTGAAGACCATAAC...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCAAGCGGCCCATGCCCTaGTTGACGTTGATGTTTCCG +
Preference number: 5 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSKRPMP*LTLMFP
Trigger: CGGAAACATCAACGTCAACAAGGGCATGGGCCGCTT...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCGCGGGAGTTGCATATTaGGGTGTAGCTGGTACCTCG +
Preference number: 5 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSAGVAY*GVAGTS
Trigger: CGAGGTACCAGCTACACCCAAATATGCAACTCCCGC...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGAAGCCTAGAGCTGGCTaGAAGAACACACACAGACCA +
Preference number: 5 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGKPRAG*KNTHRP
Trigger: TGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTT...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TCAGGGCTTGAGGTCTCGGCATCGTGTCTCAGTCAGTCCTTGGCGATGTCCCCTGCCACAACAAGTTGGTaGTTAAGTAAAAATGGGAGT +
Preference number: 5 (lower is better)
Translates to: SGLEVSASCLSQSLAMSPATTSW*LSKNGS
Trigger: ACTCCCATTTTTACTTAACAACCAACTTGTTGTGGC...AGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAAGGAGTCGGTCACTCTaGTCCACCACTTCGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTRSRSL*STTSLF
Trigger: GAACAACGAAGTGGTGGACAAGAGTGACCGACTCCT...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS GCA 90 bp TGCGAAATCCAACCCCACAGGTCCTATGAAACTACTCATCTTTTCTaGTTTCAAGTTGCCATCCAGAGCGAGGGTGGCCTAGGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: CEIQPHRSYETTHLF*FQVAIQSEGGLGLV
Trigger: TACCAAGCCTAGGCCACCCTCGCTCTGGATGGCAACTTGAAAGCAGAAAAGATGAGTAGTTTCATAGGACCTGTGGGGTTGGATTTCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS CCA 90 bp ACACTCTGTTTACAACTCATTTCCCTCCACGCATTCATGCATCCCTaGCTCTCAGCGGGGCCTAAAATCCCTGTCAATGACCGGAAATTG +
Preference number: 5 (lower is better)
Translates to: TLCLQLISLHAFMHP*LSAGPKIPVNDRKL
Trigger: CAATTTCCGGTCATTGACAGGGATTTTAGGCCCCGCTGAGAGCCAGGGATGCATGAATGCGTGGAGGGAAATGAGTTGTAAACAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CAA 90 bp CAAAGGAACCACCACTCAGAGAATCATGGAGCCAGTGGAGTTAGAAGTGGAAGGAGGGATTGGTCATCGTaGATGATCCGTCCACCTTTG +
Preference number: 5 (lower is better)
Translates to: QRNHHSENHGASGVRSGRRDWSS*MIRPPL
Trigger: CAAAGGTGGACGGATCATCAACGATGACCAATCCCT...CCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACTGTGGGGCTCCAGGATCCGCTTTaGTTCCTGAGCTATCAAATC +
Preference number: 5 (lower is better)
Translates to: GNENTMLRGGFSMNTTVGLQDPL*FLSYQI
Trigger: GATTTGATAGCTCAGGAACAAAAGCGGATCCTGGAG...CCCCACAGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCAGGCTATGTACACAGGGCAGTaGATCCGGCCCGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: SKTLTGKGMDMIPRILQAMYTGQ*IRPAMV
Trigger: CACCATTGCGGGCCGGATCAACTGCCCTGTGTACAT...AGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCAAGATCTTGGCTGCATaGGTGCTGGTGACAGCGACA +
Preference number: 5 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSKILAA*VLVTAT
Trigger: TGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTT...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCGTTATGGTCTTCAACTaGTCGGGGTCCCAGATGACC +
Preference number: 5 (lower is better)
Translates to: VPLLPKQKRERASFDFPLVMVFN*SGSQMT
Trigger: GGTCATCTGGGACCCCGACAAGTTGAAGACCATAAC...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCATACCCTCGAAGATGTaGTACTCCACCGCCGACTTG +
Preference number: 5 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSIPSKM*YSTADL
Trigger: CAAGTCGGCGGTGGAGTACAACATCTTCGAGGGTAT...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAACCTTATTCCTGATTTaGACGCGCTGGTACAGGTGC +
Preference number: 5 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTTLFLI*TRWYRC
Trigger: GCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGT...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACACCTGATAAGCTGAAGTaGGACTGGTGGAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTPDKLK*DWWRFL
Trigger: CAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGG...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp ACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGGTGCGCCTGGGATTGTaGTCATCTATCTGGGCACCT +
Preference number: 5 (lower is better)
Translates to: TILEHLQGAKEPPLRESWVRLGL*SSIWAP
Trigger: AGGTGCCCAGATAGATGACAACAATCCCAGGCGCAC...CCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTATTGTCCACCACTTCGTaGTTCATTTTCTGCATGCGA +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVLSTTS*FIFCMR
Trigger: TCGCATGCAGAAAATGAACAACGAAGTGGTGGACAA...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS-3UTR CAA 90 bp CTAGGAAGGGGGAATGAAAACACCATGCTCCGAGGTGGATTCAGCATGAACACAGTCAGCATAAAGGGATaGGTCATCGTTGATGATCCG +
Preference number: 5 (lower is better)
Translates to: LGRGNENTMLRGGFSMNTVSIKG*VIVDDP
Trigger: CGGATCATCAACGATGACCAATCCCTTTATGCTGAC...TGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAGTCAGTCCTTGGCGATGTCCCCTCAGACGCACTCACAGACTTGCATACGTATTCTCTCCTATTTGTTaGATAAGTCCATCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SVSPWRCPLRRTHRLAYVFSPIC*ISPSSR
Trigger: CCTGGAGGATGGACTTATCAAACAAATAGGAGAGAA...TACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACTGTAAGGGTTTTGGGCTCCAGGATCCGCTTTaGTTCCTGAGCTATCAAATC +
Preference number: 5 (lower is better)
Translates to: CGPEVGAMSKHLHCKGFGLQDPL*FLSYQI
Trigger: GATTTGATAGCTCAGGAACAAAAGCGGATCCTGGAG...CCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp AAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCATGTACACAGGGCAGTaGATCCGGCCCGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: KHTTLVPLLPKQKRERASMYTGQ*IRPAMV
Trigger: CACCATTGCGGGCCGGATCAACTGCCCTGTGTACAT...GGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTCAGGCTCGGCCCATGCCCTTGTaGACGTTGATGTTTCCGTCT +
Preference number: 5 (lower is better)
Translates to: SKTLTGKGMDMIPRILQARPMPL*TLMFPS
Trigger: AGACGGAAACATCAACGTCAACAAGGGCATGGGCCG...AGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCCACCTTATTCCTGATTTaGACGCGCTGGTACAGGTGC +
Preference number: 5 (lower is better)
Translates to: YHFFLNRKGKEHPSTSPSTLFLI*TRWYRC
Trigger: GCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGT...GGAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS GCA 90 bp CTCCAGGATCCGCTTTTGTTCCTGAGCTATCAAATCTCCATTTTCTaGATGGACCAAGATCACAGCTCCCAGGCCCTTAAGGAAGGTAAA +
Preference number: 5 (lower is better)
Translates to: LQDPLLFLSYQISIF*MDQDHSSQALKEGK
Trigger: TTTACCTTCCTTAAGGGCCTGGGAGCTGTGATCTTGGTCCATGCAGAAAATGGAGATTTGATAGCTCAGGAACAAAAGCGGATCCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
CDS-3UTR CAA 90 bp ACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGCTGGCTGTCGGACATTaGGTAGACATCCTTATAGGC +
Preference number: 5 (lower is better)
Translates to: TILEHLQGAKEPPLRESWLAVGH*VDILIG
Trigger: GCCTATAAGGATGTCTACCAAATGTCCGACAGCCAG...CCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TGTGGACCAGAGGTGGGGGCAATGAGTAAACATCTTCACTGTAAGGGTTTTGGGATGCCCTTGTTGACGTaGATGTTTCCGTCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: CGPEVGAMSKHLHCKGFGMPLLT*MFPSSK
Trigger: CTTTGAAGACGGAAACATCAACGTCAACAAGGGCAT...CCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS-3UTR CAA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAAAGGAATTGACGCCTTaGTCCTGCACCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: FPSKHTTLVPLLPKQKREKELTP*SCTSTS
Trigger: GGAGGTGCTGGTGCAGGACAAAGGCGTCAATTCCTT...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTGTTATGGTCTTCAACTaGTCGGGGTCCCAGATGACC +
Preference number: 5 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILVMVFN*SGSQMT
Trigger: GGTCATCTGGGACCCCGACAAGTTGAAGACCATAAC...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp TGGGTTTCAAAAACACTGACAGGAAAAGGGATGGACATGATTCCCAGAATCCTTATACCCTCGAAGATGTaGTACTCCACCGCCGACTTG +
Preference number: 5 (lower is better)
Translates to: WVSKTLTGKGMDMIPRILIPSKM*YSTADL
Trigger: CAAGTCGGCGGTGGAGTACAACATCTTCGAGGGTAT...AAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS-3UTR CAA 90 bp GTACCACTTCTTCCTAAACAGAAAAGGGAAAGAGCATCCTTCGACTTCCCCCTCTTCTCTCCTATTTGTTaGATAAGTCCATCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VPLLPKQKRERASFDFPLFSPIC*ISPSSR
Trigger: CCTGGAGGATGGACTTATCAAACAAATAGGAGAGAA...GAGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS CCA 90 bp CCTCACTTCTTGCTGCTTGTGCTCATTTCACAGATGGAAGCTTTCTaGAAACAGATGGCAAATATCCAGCACTTTCTTGTGGACCAGTTT +
Preference number: 5 (lower is better)
Translates to: PHFLLLVLISQMEAF*KQMANIQHFLVDQF
Trigger: AAACTGGTCCACAAGAAAGTGCTGGATATTTGCCATCTGTTTCCAGAAAGCTTCCATCTGTGAAATGAGCACAAGCAGCAAGAAGTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS-3UTR CAA 90 bp ACTATCCTAGAACATCTACAGGGTGCAAAGGAACCACCACTCAGAGAATCATGGTTCTCTCCTATTTGTTaGATAAGTCCATCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TILEHLQGAKEPPLRESWFSPIC*ISPSSR
Trigger: CCTGGAGGATGGACTTATCAAACAAATAGGAGAGAA...CCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000512574.1
CDS CCA 90 bp TGCTGCTTGTGCTCATTTCACAGATGGAAGCTTTCTGGAAACAGATaGCAAATATCCAGCACTTTCTTGTGGACCAGTTTAAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: CCLCSFHRWKLSGNR*QISSTFLWTSLSVP
Trigger: TGGAACACTTAAACTGGTCCACAAGAAAGTGCTGGATATTTGCCATCTGTTTCCAGAAAGCTTCCATCTGTGAAATGAGCACAAGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS-3UTR CAA 90 bp TTTCCAAGCAAACACACCACACTAGTACCACTTCTTCCTAAACAGAAAAGGGAAGCCACAACAAGTTGGTaGTTAAGTAAAAATGGGAGT +
Preference number: 5 (lower is better)
Translates to: FPSKHTTLVPLLPKQKREATTSW*LSKNGS
Trigger: ACTCCCATTTTTACTTAACAACCAACTTGTTGTGGC...TTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324989.12
ENST00000397890.6
CDS TCA 72 bp GCGCCCTCGGCCCGGCCGCTGACCTGCGGGGCTGTCTaGCTGGAACCGGCGCTCTCGGCCCCGCTCCCAGCG +
Preference number: 6 (lower is better)
Translates to: APSARPLTCGAV*LEPALSAPLPA
Trigger: CGCTGGGAGCGGGGCCGAGAGCGCCGGTTCCAGTCAGACAGCCCCGCAGGTCAGCGGCCGGGCCGAGGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397890.6
ENST00000506216.5
CDS GCA 72 bp CCGAGGGCTCGCTCACGTCGCTGGCCGTGTCCTCGCTaGCTCCCGGCCCTGGCAGCCCGACCGCGTCGGGCC +
Preference number: 6 (lower is better)
Translates to: PRARSRRWPCPR*LPALAARPRRA
Trigger: GGCCCGACGCGGTCGGGCTGCCAGGGCCGGGAGGCAGCGAGGACACGGCCAGCGACGTGAGCGAGCCCTCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS TCA 72 bp GCGTCGGCGGCCGCTCGTCGCGCTCTCCGGGAGAGCTaGCCGCGGAGCCCGAGGGCTCGCTCACGTCGCTGG +
Preference number: 6 (lower is better)
Translates to: ASAAARRALRES*PRSPRARSRRW
Trigger: CCAGCGACGTGAGCGAGCCCTCGGGCTCCGCGGTCAGCTCTCCCGGAGAGCGCGACGAGCGGCCGCCGACGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324989.12
CDS CCA 72 bp GGAGGGATAGAGACACGGACGGAGGCTCGGCGCCCGTaGATGCCCACGCGCGGCTGCCCCGGCTGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: GGIETRTEARRP*MPTRGCPGCSA
Trigger: GGCCGAGCAGCCGGGGCAGCCGCGCGTGGGCATCCACGGGCGCCGAGCCTCCGTCCGTGTCTCTATCCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397890.6
ENST00000506216.5
CDS CCA 72 bp CGGTCACTCGTGATGTGCGGGATGCTCTTCTTGCCCTaGTACGACATGGCCCCCTCTGGCGCCCTCGGCCCG +
Preference number: 6 (lower is better)
Translates to: RSLVMCGMLFLP*YDMAPSGALGP
Trigger: CGGGCCGAGGGCGCCAGAGGGGGCCATGTCGTACCAGGGCAAGAAGAGCATCCCGCACATCACGAGTGACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397890.6
ENST00000506216.5
CDS CAA 90 bp CCTTTGATGAGGAGTCGGTCACTCGTGATGTGCGGGATGCTCTTCTaGCCCTGGTACGACATGGCCCCCTCTGGCGCCCTCGGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: PLMRSRSLVMCGMLF*PWYDMAPSGALGPA
Trigger: GGCCGGGCCGAGGGCGCCAGAGGGGGCCATGTCGTACCAGGGCAAGAAGAGCATCCCGCACATCACGAGTGACCGACTCCTCATCAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397890.6
ENST00000506216.5
CDS GCA 72 bp TGGGGATGCTGTGGGGAGGACACCTCCACACCAGCCTaGAGGAGGACGAGGAAGGAGGGCAATGGAGCCACA +
Preference number: 6 (lower is better)
Translates to: WGCCGEDTSTPA*RRTRKEGNGAT
Trigger: TGTGGCTCCATTGCCCTCCTTCCTCGTCCTCCTGCAGGCTGGTGTGGAGGTGTCCTCCCCACAGCATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS CAA 72 bp AGGAGTCGGTCACTCGTGATGTGCGGGATGCTCTTCTaGCCCTGGTACGACATGGCCCCCTCTGGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: RSRSLVMCGMLF*PWYDMAPSGAL
Trigger: GAGGGCGCCAGAGGGGGCCATGTCGTACCAGGGCAAGAAGAGCATCCCGCACATCACGAGTGACCGACTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397890.6
ENST00000506216.5
CDS CAA 72 bp CCCACCCCGAGACAAAGCGTAAAGACGGGGATTCCTTaGTTTCCGGCCACACCCAGGGACGCAGCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: PTPRQSVKTGIP*FPATPRDAARL
Trigger: CAGCCGGGCTGCGTCCCTGGGTGTGGCCGGAAACAAAGGAATCCCCGTCTTTACGCTTTGTCTCGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511535.1
CDS CAA 72 bp TTTCAAGTTGCCATCCAGAGCGAGGGTGGCCTAGGCTaGGTACAGCTCCCCCAGCACTGTGGTTGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: FQVAIQSEGGLG*VQLPQHCGWGL
Trigger: CAGCCCCCAACCACAGTGCTGGGGGAGCTGTACCAAGCCTAGGCCACCCTCGCTCTGGATGGCAACTTGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS CCA 72 bp GGTCCGGACTTCCACTCCATCAGTAAAGGCGGGGAGTaGGGAGCGCTGGATGATCTTTTTCCCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GPDFHSISKGGE*GALDDLFPSSS
Trigger: GCTGGAGGAGGGAAAAAGATCATCCAGCGCTCCCCACTCCCCGCCTTTACTGATGGAGTGGAAGTCCGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511535.1
CDS GCA 72 bp GGACCTGTACAGGGTCCCAGCATGAGTCAGTGGCAGTaGCCTAACCCAACACGGGGCTTCATCCTCCATATC +
Preference number: 6 (lower is better)
Translates to: GPVQGPSMSQWQ*PNPTRGFILHI
Trigger: GATATGGAGGATGAAGCCCCGTGTTGGGTTAGGGCACTGCCACTGACTCATGCTGGGACCCTGTACAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS CAA 72 bp GCAGTCATCCCCTGGGAGGGCTTCTGCAGGTACGTGTaGACATCAATACCTCCGGGAATAACCATCCGCCCG +
Preference number: 6 (lower is better)
Translates to: AVIPWEGFCRYV*TSIPPGITIRP
Trigger: CGGGCGGATGGTTATTCCCGGAGGTATTGATGTCAACACGTACCTGCAGAAGCCCTCCCAGGGGATGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000511535.1
ENST00000512574.1
CDS CAA 90 bp TCATCAGCCGCAGTCATCCCCTGGGAGGGCTTCTGCAGGTACGTGTaGACATCAATACCTCCGGGAATAACCATCCGCCCGTTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: SSAAVIPWEGFCRYV*TSIPPGITIRPLAS
Trigger: TGAAGCCAACGGGCGGATGGTTATTCCCGGAGGTATTGATGTCAACACGTACCTGCAGAAGCCCTCCCAGGGGATGACTGCGGCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000511535.1
ENST00000512574.1
CDS TCA 72 bp GACCCCAAATCCCTTCCAAAGAGAAGTCACTTTGCCTaGCACTACCACCTACCCACCCCCGGAAAGGACCCC +
Preference number: 6 (lower is better)
Translates to: DPKSLPKRSHFA*HYHLPTPGKDP
Trigger: GGGGTCCTTTCCGGGGGTGGGTAGGTGGTAGTGTCAGGCAAAGTGACTTCTCTTTGGAAGGGATTTGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS GCA 72 bp AAAACCTTATTCCTGATTTTGACGCGCTGGTACAGGTaGTCCGGGAACGCCTTCCGCGGAATGAAGCGGCCC +
Preference number: 6 (lower is better)
Translates to: KTLFLILTRWYR*SGNAFRGMKRP
Trigger: GGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
CDS TCA 72 bp GGGTGGGGGCTGGTGTTTAGAAGGCGAAGATTTGGCTaGAGGAGCGGGAGTTGCATATTTGGGTGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: GWGLVFRRRRFG*RSGSCIFGCSW
Trigger: CCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCTTCTAAACACCAGCCCCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
ENST00000513911.5
CDS GCA 72 bp GGAGGACCCCAAATCCCTTCCAAAGAGAAGTCACTTTaGCTGACACTACCACCTACCCACCCCCGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: GGPQIPSKEKSL*LTLPPTHPRKG
Trigger: TCCTTTCCGGGGGTGGGTAGGTGGTAGTGTCAGGCAAAGTGACTTCTCTTTGGAAGGGATTTGGGGTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS GCA 72 bp GCATGTGTGCCCTTCTGGGCAGATAAAGCAGAGCCCTaGGGGCGAGAGAGAAACCTGAGGTCACTTCAAATG +
Preference number: 6 (lower is better)
Translates to: ACVPFWADKAEP*GRERNLRSLQM
Trigger: CATTTGAAGTGACCTCAGGTTTCTCTCTCGCCCGCAGGGCTCTGCTTTATCTGCCCAGAAGGGCACACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS CCA 72 bp AGTGTGATTGATCGACACTGTGCATGTGTGCCCTTCTaGGCAGATAAAGCAGAGCCCTGCGGGCGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: SVIDRHCACVPF*ADKAEPCGRER
Trigger: TCTCTCTCGCCCGCAGGGCTCTGCTTTATCTGCCCAGAAGGGCACACATGCACAGTGTCGATCAATCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS CAA 72 bp GGGAACGCCTTCCGCGGAATGAAGCGGCCCATGCCCTaGTTGACGTTGATGTTTCCGTCTTCAAAGACGATC +
Preference number: 6 (lower is better)
Translates to: GNAFRGMKRPMP*LTLMFPSSKTI
Trigger: GATCGTCTTTGAAGACGGAAACATCAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
CDS CAA 72 bp AGGAGGACCCCAAATCCCTTCCAAAGAGAAGTCACTTaGCCTGACACTACCACCTACCCACCCCCGGAAAGG +
Preference number: 6 (lower is better)
Translates to: RRTPNPFQREVT*PDTTTYPPPER
Trigger: CCTTTCCGGGGGTGGGTAGGTGGTAGTGTCAGGCAAAGTGACTTCTCTTTGGAAGGGATTTGGGGTCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS GCA 72 bp AAGTCATCAGCCGCAGTCATCCCCTGGGAGGGCTTCTaGAGGTACGTGTTGACATCAATACCTCCGGGAATA +
Preference number: 6 (lower is better)
Translates to: KSSAAVIPWEGF*RYVLTSIPPGI
Trigger: TATTCCCGGAGGTATTGATGTCAACACGTACCTGCAGAAGCCCTCCCAGGGGATGACTGCGGCTGATGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000511535.1
ENST00000512574.1
CDS CCA 72 bp GGCCTAAAATCCCTGTCAATGACCGGAAATTGCAGATaGGGACACTGTCCCTCCCCAACTCCTACACTCCCT +
Preference number: 6 (lower is better)
Translates to: GLKSLSMTGNCR*GHCPSPTPTLP
Trigger: AGGGAGTGTAGGAGTTGGGGAGGGACAGTGTCCCCATCTGCAATTTCCGGTCATTGACAGGGATTTTAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS CAA 72 bp GGCGAAGATTTGGCTGAAGGAGCGGGAGTTGCATATTaGGGTGTAGCTGGTACCTCGTACACAGGACCGTCA +
Preference number: 6 (lower is better)
Translates to: GEDLAEGAGVAY*GVAGTSYTGPS
Trigger: TGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
ENST00000513911.5
CDS CAA 90 bp TGGAGGTTTCTGATGGGTGGGGGCTGGTGTTTAGAAGGCGAAGATTaGGCTGAAGGAGCGGGAGTTGCATATTTGGGTGTAGCTGGTACC +
Preference number: 6 (lower is better)
Translates to: WRFLMGGGWCLEGED*AEGAGVAYLGVAGT
Trigger: GGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
ENST00000513911.5
CDS GCA 72 bp CTGACGGAAAGAATGATTGCAGCCGAAGGGCTATTGTaGGATTCTCAGGAGCTGCAGGCTCTGGTAATGCTG +
Preference number: 6 (lower is better)
Translates to: LTERMIAAEGLL*DSQELQALVML
Trigger: CAGCATTACCAGAGCCTGCAGCTCCTGAGAATCGCACAATAGCCCTTCGGCTGCAATCATTCTTTCCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS GCA 72 bp TGCGGGCGAGAGAGAAACCTGAGGTCACTTCAAATGTaGATGCACACACACACACAACACGCACACACGACA +
Preference number: 6 (lower is better)
Translates to: CGRERNLRSLQM*MHTHTQHAHTT
Trigger: TGTCGTGTGTGCGTGTTGTGTGTGTGTGTGCATGCACATTTGAAGTGACCTCAGGTTTCTCTCTCGCCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS GCA 72 bp CACTCTGTTTACAACTCATTTCCCTCCACGCATTCATaGATCCCTGGCTCTCAGCGGGGCCTAAAATCCCTG +
Preference number: 6 (lower is better)
Translates to: HSVYNSFPSTHS*IPGSQRGLKSL
Trigger: CAGGGATTTTAGGCCCCGCTGAGAGCCAGGGATGCATGAATGCGTGGAGGGAAATGAGTTGTAAACAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS CCA 72 bp TGCAATCCAAAAACCTTATTCCTGATTTTGACGCGCTaGTACAGGTGCTCCGGGAACGCCTTCCGCGGAATG +
Preference number: 6 (lower is better)
Translates to: CNPKTLFLILTR*YRCSGNAFRGM
Trigger: CATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
CDS CCA 72 bp GCAGGCTCTGGTAATGCTGATAAGCTGAAGTTGGACTaGTGGAGGTTTCTGATGGGTGGGGGCTGGTGTTTA +
Preference number: 6 (lower is better)
Translates to: AGSGNADKLKLD*WRFLMGGGWCL
Trigger: TAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGCATTACCAGAGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS CAA 72 bp AACGCCTTCCGCGGAATGAAGCGGCCCATGCCCTTGTaGACGTTGATGTTTCCGTCTTCAAAGACGATCTTG +
Preference number: 6 (lower is better)
Translates to: NAFRGMKRPMPL*TLMFPSSKTIL
Trigger: CAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
CDS CAA 72 bp CTGATGGGTGGGGGCTGGTGTTTAGAAGGCGAAGATTaGGCTGAAGGAGCGGGAGTTGCATATTTGGGTGTA +
Preference number: 6 (lower is better)
Translates to: LMGGGWCLEGED*AEGAGVAYLGV
Trigger: TACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
ENST00000513911.5
CDS CAA 90 bp TGTTTAGAAGGCGAAGATTTGGCTGAAGGAGCGGGAGTTGCATATTaGGGTGTAGCTGGTACCTCGTACACAGGACCGTCATACATGCCC +
Preference number: 6 (lower is better)
Translates to: CLEGEDLAEGAGVAY*GVAGTSYTGPSYMP
Trigger: GGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCTTCTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
ENST00000513911.5
CDS GCA 72 bp CCGACAGCTGATGATGACTCTGACGGAAAGAATGATTaGAGCCGAAGGGCTATTGTGCGATTCTCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: PTADDDSDGKND*SRRAIVRFSGA
Trigger: AGCTCCTGAGAATCGCACAATAGCCCTTCGGCTGCAATCATTCTTTCCGTCAGAGTCATCATCAGCTGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS CCA 72 bp CGAAGATGTTGTACTCCACCGCCGACTTGTGACTTTTaGCTGTTATGGTCTTCAACTTGTCGGGGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: RRCCTPPPTCDF*LLWSSTCRGPR
Trigger: TCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACATCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
CDS CCA 72 bp TCATCTATCTGGGCACCTGATAAGCTGAAGTTGGACTaGTGGAGGTTTCTGATGGGTGGGGGCTGGTGTTTA +
Preference number: 6 (lower is better)
Translates to: SSIWAPDKLKLD*WRFLMGGGWCL
Trigger: TAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000511535.1
ENST00000512574.1
ENST00000513911.5
CDS CCA 72 bp GGCTCTGGTAATGCTGATAAGCTGAAGTTGGACTGGTaGAGGTTTCTGATGGGTGGGGGCTGGTGTTTAGAA +
Preference number: 6 (lower is better)
Translates to: GSGNADKLKLDW*RFLMGGGWCLE
Trigger: TTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGCATTACCAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS CCA 72 bp TTACAACTCATTTCCCTCCACGCATTCATGCATCCCTaGCTCTCAGCGGGGCCTAAAATCCCTGTCAATGAC +
Preference number: 6 (lower is better)
Translates to: LQLISLHAFMHP*LSAGPKIPVND
Trigger: GTCATTGACAGGGATTTTAGGCCCCGCTGAGAGCCAGGGATGCATGAATGCGTGGAGGGAAATGAGTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS CAA 72 bp ACTCTGACGGAAAGAATGATTGCAGCCGAAGGGCTATaGTGCGATTCTCAGGAGCTGCAGGCTCTGGTAATG +
Preference number: 6 (lower is better)
Translates to: TLTERMIAAEGL*CDSQELQALVM
Trigger: CATTACCAGAGCCTGCAGCTCCTGAGAATCGCACAATAGCCCTTCGGCTGCAATCATTCTTTCCGTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS CAA 90 bp CTGATGATGACTCTGACGGAAAGAATGATTGCAGCCGAAGGGCTATaGTGCGATTCTCAGGAGCTGCAGGCTCTGGTAATGCTGATAAGC +
Preference number: 6 (lower is better)
Translates to: LMMTLTERMIAAEGL*CDSQELQALVMLIS
Trigger: GCTTATCAGCATTACCAGAGCCTGCAGCTCCTGAGAATCGCACAATAGCCCTTCGGCTGCAATCATTCTTTCCGTCAGAGTCATCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS GCA 72 bp CAACCCCACAGGTCCTATGAAACTACTCATCTTTTCTaGTTTCAAGTTGCCATCCAGAGCGAGGGTGGCCTA +
Preference number: 6 (lower is better)
Translates to: QPHRSYETTHLF*FQVAIQSEGGL
Trigger: TAGGCCACCCTCGCTCTGGATGGCAACTTGAAAGCAGAAAAGATGAGTAGTTTCATAGGACCTGTGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS TCA 72 bp ATCCAAAAACCTAAACAGAGGAAGGGAGAGTGTGATTaGTCGACACTGTGCATGTGTGCCCTTCTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: IQKPKQRKGECD*STLCMCALLGR
Trigger: TCTGCCCAGAAGGGCACACATGCACAGTGTCGATCAATCACACTCTCCCTTCCTCTGTTTAGGTTTTTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513911.5
CDS CAA 72 bp AAGTCCATCCTCCAGGTAGACGTCAGCATAAAGGGATaGGTCATCGTTGATGATCCGTCCACCTTTGATGAG +
Preference number: 6 (lower is better)
Translates to: KSILQVDVSIKG*VIVDDPSTFDE
Trigger: CTCATCAAAGGTGGACGGATCATCAACGATGACCAATCCCTTTATGCTGACGTCTACCTGGAGGATGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1
CDS CAA 72 bp TTGATGAGGAGTCGGTCACTCTTGTCCACCACTTCGTaGTTCATTTTCTGCATGCGAAATCCAACCCCACAG +
Preference number: 6 (lower is better)
Translates to: LMRSRSLLSTTS*FIFCMRNPTPQ
Trigger: CTGTGGGGTTGGATTTCGCATGCAGAAAATGAACAACGAAGTGGTGGACAAGAGTGACCGACTCCTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512574.1
CDS CAA 90 bp TCAATTGATAAGTCCATCCTCCAGGTAGACGTCAGCATAAAGGGATaGGTCATCGTTGATGATCCGTCCACCTTTGATGAGGAGTCGGTC +
Preference number: 6 (lower is better)
Translates to: SIDKSILQVDVSIKG*VIVDDPSTFDEESV
Trigger: GACCGACTCCTCATCAAAGGTGGACGGATCATCAACGATGACCAATCCCTTTATGCTGACGTCTACCTGGAGGATGGACTTATCAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506216.5
CDS CAA 72 bp GAAGGTAAAGGCTTCATAGAGCTGGCTGTCGGACATTaGGTAGACATCCTTATAGGCCATGTAGACTTGGAA +
Preference number: 6 (lower is better)
Translates to: EGKGFIELAVGH*VDILIGHVDLE
Trigger: TTCCAAGTCTACATGGCCTATAAGGATGTCTACCAAATGTCCGACAGCCAGCTCTATGAAGCCTTTACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324989.12
ENST00000397890.6
ENST00000506216.5
ENST00000511535.1
ENST00000512574.1