Pregenerated sensors for CRLF3 (Homo sapiens)
Ensembl gene IDs: ENSG00000176390Ensembl transcript IDs: ENST00000324238.7, ENST00000583527.1, ENST00000585268.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGAGCTACGTTAGACCCTaGAAACCAAAGCCAAGCACC | + |
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Preference number: 2 (lower is better) Translates to: CGQHMNGCINTLHSFFYLSYVRP*KPKPST Trigger: GGTGCTTGGCTTTGGTTTTCAGGGTCTAACGTAGCT...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGGTAAACACTTTCCAATaGCCTAAGTTAGAGATGAAT | + |
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Preference number: 2 (lower is better) Translates to: CGQHMNGCINTLHSFFYLVNTFQ*PKLEMN Trigger: ATTCATCTCTAACTTAGGCCATTGGAAAGTGTTTAC...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR GCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGCCGGTAGCTCTGCGCTaGCTCCACGTTCTCGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLPVALR*LHVLAG Trigger: GCCCGCGAGAACGTGGAGGCAGCGCAGAGCTACCGG...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR TCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGGGTGGGTGGAACACCTaGGGTCAGGAGTTCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLGGWNT*GQEFKT Trigger: GGTCTTGAACTCCTGACCTCAGGTGTTCCACCCACC...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR TCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGGTGATGCACTTTCTTTaGTCTGCCTCCGCGCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLVMHFL*SASAPH Trigger: GTGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCAC...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR TCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGCTCGGGCGCAGACTCTaGACTGGTAATCAACGTTGG | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLLGRRL*TGNQRW Trigger: CCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAG...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR TCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGCTAATGCACACAGCTTaGTCCCGCTGCAGAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLLMHTA*SRCRES Trigger: TGACTCTCTGCAGCGGGATCAAGCTGTGTGCATTAG...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR GCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGGTGGGAGGCAGAGGTTaGAGTGAACTGAGATCACAC | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLVGGRG*SELRSH Trigger: GTGTGATCTCAGTTCACTGCAACCTCTGCCTCCCAC...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR TCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGGTAGAGAACACCCGATaGTTCAGAATCGTTCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLVENTR*FRIVPK Trigger: CTTCGGAACGATTCTGAATCATCGGGTGTTCTCTAC...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR TCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGAACATCCCTTGTCTGTaGTGCACTTTCTTTGATCTG | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLNIPCL*CTFFDL Trigger: CAGATCAAAGAAAGTGCATCACAGACAAGGGATGTT...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR GCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGTCCATCCTGTTTTTCTaGACACACTCCTATGCTATC | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLSILFF*THSYAI Trigger: GATAGCATAGGAGTGTGTGCAGAAAAACAGGATGGA...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR GCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGGACATTAAACTGGACTaGAGCTCATTCTCTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLDIKLD*SSFSAK Trigger: CTTTGCAGAGAATGAGCTGCAGTCCAGTTTAATGTC...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR TCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGCATGTGGACAGCACATaGACGGATGTATTAATACAT | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLHVDST*TDVLIH Trigger: ATGTATTAATACATCCGTTCATGTGCTGTCCACATG...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR GCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGAGAATCGTTCCGAAGTaGTATATTTCTTCGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLRIVPK*YISSTA Trigger: AGCAGTCGAAGAAATATAGCACTTCGGAACGATTCT...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR CCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGATGTCACAGGCAGATTaGATACACACGTGCATATTA | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLMSQAD*IHTCIL Trigger: TAATATGCACGTGTGTATCCAATCTGCCTGTGACAT...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR CCA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGTTTGATTCCTATGGCTaGACAAGGTATCTACATTCT | + |
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Preference number: 4 (lower is better) Translates to: CGQHMNGCINTLHSFFYLFDSYG*TRYLHS Trigger: AGAATGTAGATACCTTGTCCAGCCATAGGAATCAAA...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR CAA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGTGTGATGCACTTTCTTaGATCTGCCTCCGCGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: CGQHMNGCINTLHSFFYLCDALS*ICLRAS Trigger: TGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCACA...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS-3UTR CAA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGCATGTCACAGGCAGATaGGATACACACGTGCATATT | + |
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Preference number: 5 (lower is better) Translates to: CGQHMNGCINTLHSFFYLHVTGR*DTHVHI Trigger: AATATGCACGTGTGTATCCAATCTGCCTGTGACATG...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS TCA 90 bp | AGTTTGGACAACATAGCAAGACCTCGTTCCTCTGCTCTGAAGTTGTaGTTTCTTCAAGGAGTCCTGATTCCTTATAGAAGAATAGTATTT | + |
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Preference number: 5 (lower is better) Translates to: SLDNIARPRSSALKL*FLQGVLIPYRRIVF Trigger: AAATACTATTCTTCTATAAGGAATCAGGACTCCTTGAAGAAATCACAACTTCAGAGCAGAGGAACGAGGTCTTGCTATGTTGTCCAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585268.1 |
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| CDS-3UTR CAA 90 bp | TGTGGACAGCACATGAACGGATGTATTAATACATTACACAGCTTCTTCTATCTGAACAAAAGGTACTACTaGCCTATTTTAGACACTTGG | + |
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Preference number: 5 (lower is better) Translates to: CGQHMNGCINTLHSFFYLNKRYY*PILDTW Trigger: CCAAGTGTCTAAAATAGGCAAGTAGTACCTTTTGTT...CAGATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000324238.7 |
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| CDS CAA 72 bp | AGCCTGGTGACAGCGAGACTCTGTAACCCTAACACTTaGGGAGTCCAAGGTGCGAAGACTTTGAGCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLVTARLCNPNT*GVQGAKTLSPG Trigger: TCCTGGGCTCAAAGTCTTCGCACCTTGGACTCCCAAAGTGTTAGGGTTACAGAGTCTCGCTGTCACCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583527.1 |
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