RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRKL (Homo sapiens)

Ensembl gene IDs: ENSG00000099942

Ensembl transcript IDs: ENST00000354336.8, ENST00000411769.1

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTaGAGAGCAGGAGGCGGTCACCGTTCTCACTGGCAAGGAAGGGCT +
Preference number: 1 (lower is better)
Translates to: ANLTHLTRSGNCRRP*RAGGGHRSHWQGRA
Trigger: AGCCCTTCCTTGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 90 bp ACTTACTTAGACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTaGCAGCCTGACGAGATTGGGCCTGGGCACGGAGGTCTGGGCTTC +
Preference number: 1 (lower is better)
Translates to: TYLDCETSMSSTNFL*QPDEIGPGHGGLGF
Trigger: GAAGCCCAGACCTCCGTGCCCAGGCCCAATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTCTAAGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 90 bp GCAGCCGGTCAACACATCGTCTTCCTCGTTAACCATGTCATCAGGTaGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTC +
Preference number: 1 (lower is better)
Translates to: AAGQHIVFLVNHVIR*FHTAQTWLTPVPQV
Trigger: GACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCACCTGATGACATGGTTAACGAGGAAGACGATGTGTTGACCGGCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 90 bp CTCCCTCTGTTGGAAACTCCACTCATGGCTCAACATGGGCCGGGATaGACCACGTCACTGGCCAAAGGGCAAACACTGTTTCTAGGCAGA +
Preference number: 1 (lower is better)
Translates to: LPLLETPLMAQHGPG*TTSLAKGQTLFLGR
Trigger: TCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAACAGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 90 bp GCAAGTAGCAGTTATGAACACCCACCCTCTGGGTCAGATGTGCACTaGTCTATGGAGCACAACAGTCTTCCCAGACCAGTGGGGAACCCA +
Preference number: 1 (lower is better)
Translates to: ASSSYEHPPSGSDVH*SMEHNSLPRPVGNP
Trigger: TGGGTTCCCCACTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGGGTGGGTGTTCATAACTGCTACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 90 bp GCAGAGCAAGTAGCAGTTATGAACACCCACCCTCTGGGTCAGATGTaGACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGTGGGGA +
Preference number: 1 (lower is better)
Translates to: AEQVAVMNTHPLGQM*TALWSTTVFPDQWG
Trigger: TCCCCACTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGGGTGGGTGTTCATAACTGCTACTTGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 90 bp GCACACATTCCTCCCTCTGTTGGAAACTCCACTCATGGCTCAACATaGGCCGGGATGAACCACGTCACTGGCCAAAGGGCAAACACTGTT +
Preference number: 1 (lower is better)
Translates to: AHIPPSVGNSTHGST*AGMNHVTGQRANTV
Trigger: AACAGTGTTTGCCCTTTGGCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAACAGAGGGAGGAATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 90 bp ACTTTCTCTGGCAGCCTGACGAGATTGGGCCTGGGCACGGAGGTCTaGGCTTCAGTGAGTGGAGTTGAACGATTCATTAATGAGTCCAAC +
Preference number: 1 (lower is better)
Translates to: TFSGSLTRLGLGTEV*ASVSGVERFINESN
Trigger: GTTGGACTCATTAATGAATCGTTCAACTCCACTCACTGAAGCCCAGACCTCCGTGCCCAGGCCCAATCTCGTCAGGCTGCCAGAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 90 bp TTCCTCGTTAACCATGTCATCAGGTGGTTCCACACAGCACAGACATaGCTGACTCCTGTACCGCAGGTCCTTCCCGGGATACACAAGTTT +
Preference number: 1 (lower is better)
Translates to: FLVNHVIRWFHTAQT*LTPVPQVLPGIHKF
Trigger: AAACTTGTGTATCCCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCACCTGATGACATGGTTAACGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 90 bp CTTCCCTTTCAGCTTTCCAAACATGAGCACAGAAGGTGTCTAGTCTaGGTGACCAAAGTCCTCAAACGGCAGCCGGTCAACACATCGTCT +
Preference number: 1 (lower is better)
Translates to: LPFQLSKHEHRRCLV*VTKVLKRQPVNTSS
Trigger: AGACGATGTGTTGACCGGCTGCCGTTTGAGGACTTTGGTCACCCAGACTAGACACCTTCTGTGCTCATGTTTGGAAAGCTGAAAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 90 bp GTGCGACTGCCAGTCTGCAGAAAGCTGGACTTCGGCAATGCAGTGTaGCTTGCCTATGAGAGAAAATGCTTTCCCACTTCAAAGGAGACT +
Preference number: 1 (lower is better)
Translates to: VRLPVCRKLDFGNAV*LAYERKCFPTSKET
Trigger: AGTCTCCTTTGAAGTGGGAAAGCATTTTCTCTCATAGGCAAGTCACACTGCATTGCCGAAGTCCAGCTTTCTGCAGACTGGCAGTCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 90 bp GGTGAGTCGGGGTATTGGTCAGTAGACAGGGCTGAAAGGAAACCTTaGTTTCCAAAATGGCCAGACTTCTTGCACTCTGAGTCAACTGCT +
Preference number: 1 (lower is better)
Translates to: GESGYWSVDRAERKP*FPKWPDFLHSESTA
Trigger: AGCAGTTGACTCAGAGTGCAAGAAGTCTGGCCATTTTGGAAAGCAAGGTTTCCTTTCAGCCCTGTCTACTGACCAATACCCCGACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 90 bp AAAGCAAGATGGCAGCTAAGCCACTGCTTTGTGGAACAGCAAACATaGAGTATCTCGCCATGGCCTCAAGCTTTCTCTGGTGAACACAAC +
Preference number: 1 (lower is better)
Translates to: KARWQLSHCFVEQQT*SISPWPQAFSGEHN
Trigger: GTTGTGTTCACCAGAGAAAGCTTGAGGCCATGGCGAGATACTGCATGTTTGCTGTTCCACAAAGCAGTGGCTTAGCTGCCATCTTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 90 bp TGTGTGCATTCCAAATGTGTGTGCGACTGCCAGTCTGCAGAAAGCTaGACTTCGGCAATGCAGTGTGACTTGCCTATGAGAGAAAATGCT +
Preference number: 1 (lower is better)
Translates to: CVHSKCVCDCQSAES*TSAMQCDLPMRENA
Trigger: AGCATTTTCTCTCATAGGCAAGTCACACTGCATTGCCGAAGTCCAGCTTTCTGCAGACTGGCAGTCGCACACACATTTGGAATGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 90 bp CTGGTGAACACAACAGAATCAGTCCCATGTACAAACGGGCAGCAATaGGAAGGAAGACCCTTTCCATGTCAACTTCTCTCCACTTGTGTG +
Preference number: 1 (lower is better)
Translates to: LVNTTESVPCTNGQQ*EGRPFPCQLLSTCV
Trigger: CACACAAGTGGAGAGAAGTTGACATGGAAAGGGTCTTCCTTCTCATTGCTGCCCGTTTGTACATGGGACTGATTCTGTTGTGTTCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 90 bp TCACTTCCTGTTGTCCAAAGAAAAGCAAGATGGCAGCTAAGCCACTaGTTTGTGGAACAGCAAACATGCAGTATCTCGCCATGGCCTCAA +
Preference number: 1 (lower is better)
Translates to: SLPVVQRKARWQLSH*FVEQQTCSISPWPQ
Trigger: TTGAGGCCATGGCGAGATACTGCATGTTTGCTGTTCCACAAAGCAGTGGCTTAGCTGCCATCTTGCTTTTCTTTGGACAACAGGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 90 bp CTCAGAGGCATGAGTCATTCCTTGCACTATCATAAAAACCCAACCTaGTACTTAACCTGTTTAGAACACACAAGTCTAGGCCAGGCGCGG +
Preference number: 1 (lower is better)
Translates to: LRGMSHSLHYHKNPT*YLTCLEHTSLGQAR
Trigger: CCGCGCCTGGCCTAGACTTGTGTGTTCTAAACAGGTTAAGTAGCAGGTTGGGTTTTTATGATAGTGCAAGGAATGACTCATGCCTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 90 bp CAGGGTTCCCAGAATTCTAGTCTGCTATGTGCAGCAGATGATGGATaGACCACACGTATATACCAGTTGGCTTGTATGAACAGGCCTCTT +
Preference number: 1 (lower is better)
Translates to: QGSQNSSLLCAADDG*TTRIYQLACMNRPL
Trigger: AAGAGGCCTGTTCATACAAGCCAACTGGTATATACGTGTGGTTCATCCATCATCTGCTGCACATAGCAGACTAGAATTCTGGGAACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 90 bp AACTGCTGTAATTCAAAGGTGTCAAGCCCTTCAGCTAAATCTGGTTaGAAAAGGCCTAAGGGTCGTGCCCTCCTTGAACAAGGCACACAT +
Preference number: 1 (lower is better)
Translates to: NCCNSKVSSPSAKSG*KRPKGRALLEQGTH
Trigger: ATGTGTGCCTTGTTCAAGGAGGGCACGACCCTTAGGCCTTTTTCAACCAGATTTAGCTGAAGGGCTTGACACCTTTGAATTACAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 90 bp AAGGGAGAGCAGACTGAATTGCACAGGGTTCCCAGAATTCTAGTCTaGTATGTGCAGCAGATGATGGATGAACCACACGTATATACCAGT +
Preference number: 1 (lower is better)
Translates to: KGEQTELHRVPRILV*YVQQMMDEPHVYTS
Trigger: ACTGGTATATACGTGTGGTTCATCCATCATCTGCTGCACATAGCAGACTAGAATTCTGGGAACCCTGTGCAATTCAGTCTGCTCTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 90 bp GCATGGCACACCACAACTGCATTATTTTGTGTGTTGTCTGCTACATaGCAAAACAAGGTACTACTGGCAACCAAGACAATAAAGGCCTCT +
Preference number: 1 (lower is better)
Translates to: AWHTTTALFCVLSAT*QNKVLLATKTIKAS
Trigger: AGAGGCCTTTATTGTCTTGGTTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAGTTGTGGTGTGCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 90 bp ATCCAAAAGAACTCTAAAATCGGCTACTCTTTGACAATACGACTATaGTACAAACATCAGGAGGCAGCCGCTGTGTGCATTCCAAATGTG +
Preference number: 1 (lower is better)
Translates to: IQKNSKIGYSLTIRL*YKHQEAAAVCIPNV
Trigger: CACATTTGGAATGCACACAGCGGCTGCCTCCTGATGTTTGTATCATAGTCGTATTGTCAAAGAGTAGCCGATTTTAGAGTTCTTTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCCGTGGTGTGCGCGCCTaGAGTCCCAGCTACTTGGGA +
Preference number: 2 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSRGVRA*SPSYLG
Trigger: TCCCAAGTAGCTGGGACTGCAGGCGCGCACACCACG...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp CTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGCGGGTGGATCACCTaGAGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: LTHLTRSGNCRRPCRAGGGGWIT*SQEFET
Trigger: GGTCTCAAACTCCTGACTTCAGGTGATCCACCCGCC...GCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp CTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGTGCGACTGCCAGTCTaGAGAAAGCTGGACTTCGGC +
Preference number: 2 (lower is better)
Translates to: LTHLTRSGNCRRPCRAGGVRLPV*RKLDFG
Trigger: GCCGAAGTCCAGCTTTCTGCAGACTGGCAGTCGCAC...GCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCGCAGGAAGGCGAGATTaGGCCACTGCACTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSAGRRD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCGCAATCTCGCCTTCCTGC...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCCAAGGGAGAGCAGACTaGATTGCACAGGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSQGRAD*IAQGSQ
Trigger: CTGGGAACCCTGTGCAATTCAGTCTGCTCTCCCTTG...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCGAGGCAGCCGCTGTGTaGATTCCAAATGTGTGTGCG +
Preference number: 2 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSEAAAV*IPNVCA
Trigger: CGCACACACATTTGGAATGCACACAGCGGCTGCCTC...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp GTTGGAAACTCCACTCATGGCTCAACATGGGCCGGGATGAACCACGTCACTGGCACCAGAAGCGGCAACTaGCGCAGACCGTGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: VGNSTHGSTWAGMNHVTGTRSGN*RRPCRA
Trigger: TGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGT...GCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTACCCAGGCACGAAGCTaGGCTGAGGCAGCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPTQARS*AEAAVL
Trigger: CAGCACTGCTGCCTCAGCTCAGCTTCGTGCCTGGGT...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTAACTGCCGCAGACCGTaGAGAGCAGGAGGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPNCRRP*RAGGGH
Trigger: GTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTT...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGAGCACCAACTTTCTCTaGCAGCCTGACGAGATTGGG +
Preference number: 2 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRSTNFL*QPDEIG
Trigger: CCCAATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCT...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCCTGAAGTCAGGAGTTTaGGACCAGCCTGGTCAACAT +
Preference number: 2 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSLKSGV*DQPGQH
Trigger: ATGTTGACCAGGCTGGTCTCAAACTCCTGACTTCAG...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGAAATGTGTGTGCGACTaGCAGTCTGCAGAAAGCTGG +
Preference number: 2 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRKCVCD*QSAESW
Trigger: CCAGCTTTCTGCAGACTGGCAGTCGCACACACATTT...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGGTGCTACGCCAGGCCTaGACCCAAAATAAGCCAACC +
Preference number: 2 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQVLRQA*TQNKPT
Trigger: GGTTGGCTTATTTTGGGTTCAGGCCTGGCGTAGCAC...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGTGGCAGCTAAGCCACTaGTTTGTGGAACAGCAAACA +
Preference number: 2 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRWQLSH*FVEQQT
Trigger: TGTTTGCTGTTCCACAAAGCAGTGGCTTAGCTGCCA...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGAATGGCCAGACTTCTTaGACTCTGAGTCAACTGCTG +
Preference number: 2 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRNGQTS*TLSQLL
Trigger: CAGCAGTTGACTCAGAGTGCAAGAAGTCTGGCCATT...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCGCTGTGCACATAGCATaGCACACCACAACTGCATTA +
Preference number: 2 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSAVHIA*HTTTAL
Trigger: TAATGCAGTTGTGGTGTGCCATGCTATGTGCACAGC...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp AAAGTCCTCAAACGGCAGCCGGTCAACACATCGTCTTCCTCGTTAACCATGTCACTTTCTCTGGCAGCCTaGCGAGATTGGGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: KVLKRQPVNTSSSSLTMSLSLAA*RDWAWA
Trigger: TGCCCAGGCCCAATCTCGTCAGGCTGCCAGAGAAAG...TGACATGGTTAACGAGGAAGACGATGTGTTGACCGGCTGCCGTTTGAGGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTAGAGCAGTGGCCATCTaGCTCAGGCCTGCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSRAVAI*LRPALS
Trigger: AGACAAGGCAGGCCTGAGGCAGATGGCCACTGCTCT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGCATTCACTGAAAAGCTaGACAGAAAACTGGCCAAGT +
Preference number: 2 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRHSLKS*TENWPS
Trigger: ACTTGGCCAGTTTTCTGTTCAGCTTTTCAGTGAATG...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp GTTGGAAACTCCACTCATGGCTCAACATGGGCCGGGATGAACCACGTCACTGGCGCAGCAGATGATGGATaGACCACACGTATATACCAG +
Preference number: 2 (lower is better)
Translates to: VGNSTHGSTWAGMNHVTGAADDG*TTRIYQ
Trigger: CTGGTATATACGTGTGGTTCATCCATCATCTGCTGC...GCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp TATCTGGAGTGCAGAACTCAAGCTCGCCTTGTTTTGAGCTCTGAATCTCCTGGCGTGCGCCACACAAGGTaGGTCGGGGTATTGGTCAGT +
Preference number: 2 (lower is better)
Translates to: YLECRTQARLVLSSESPGVRHTR*VGVLVS
Trigger: ACTGACCAATACCCCGACTCACCTTGTGTGGCGCAC...GCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCGTGTTGTCTGCTACATaGCAAAACAAGGTACTACTG +
Preference number: 2 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSVLSAT*QNKVLL
Trigger: CAGTAGTACCTTGTTTTGCCATGTAGCAGACAACAC...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGCAGCAGTTATCTGCCTaGTGGAATACTGATTTAAAG +
Preference number: 2 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRQQLSA*WNTDLK
Trigger: CTTTAAATCAGTATTCCATCAGGCAGATAACTGCTG...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp CCAAACCACAGGTATACTCTAGGTATATCTGATTCTGAAGTGCGCCACACAAGGTCTGCCACTTGTGGGTaGTACGCCAGGCCTGAACCC +
Preference number: 2 (lower is better)
Translates to: PNHRYTLGISDSEVRHTRSATCG*YARPEP
Trigger: GGGTTCAGGCCTGGCGTAGCACCCACAAGTGGCAGA...CCTTGTGTGGCGCACTTCAGAATCAGATATACCTAGAGTATACCTGTGGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTAGTGTGACTTGCCTATaGGAGAAAATGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPSVTCL*EKMLSH
Trigger: GTGGGAAAGCATTTTCTCTCATAGGCAAGTCACACT...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTCACTTACTTAGACTGTaGGACCAGTATGAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPHLLRL*DQYEQH
Trigger: GTGCTGCTCATACTGGTCTCACAGTCTAAGTAAGTG...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp GTTGGAAACTCCACTCATGGCTCAACATGGGCCGGGATGAACCACGTCACTGGCCACAGTCACAGCAGATaGTCAGTAAATGAAAGCTAC +
Preference number: 2 (lower is better)
Translates to: VGNSTHGSTWAGMNHVTGHSHSR*SVNESY
Trigger: GTAGCTTTCATTTACTGATCATCTGCTGTGACTGTG...GCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp CCAAACCACAGGTATACTCTAGGTATATCTGATTCTGAAGTGCGCCACACAAGGCAACATGGGCCGGGATaGACCACGTCACTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: PNHRYTLGISDSEVRHTRQHGPG*TTSLAK
Trigger: TTTGGCCAGTGACGTGGTTCATCCCGGCCCATGTTG...CCTTGTGTGGCGCACTTCAGAATCAGATATACCTAGAGTATACCTGTGGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTGATGAACCACGTCACTaGCCAAAGGGCAAACACTGT +
Preference number: 2 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSDEPRH*PKGKHC
Trigger: ACAGTGTTTGCCCTTTGGCCAGTGACGTGGTTCATC...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp TATCTGGAGTGCAGAACTCAAGCTCGCCTTGTTTTGAGCTCTGAATCTCCTGGCACAAACGGGCAGCAATaGGAAGGAAGACCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: YLECRTQARLVLSSESPGTNGQQ*EGRPFP
Trigger: TGGAAAGGGTCTTCCTTCTCATTGCTGCCCGTTTGT...GCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGGCCTATGAGAGAAAATaGTTTCCCACTTCAAAGGAG +
Preference number: 2 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQAYERK*FPTSKE
Trigger: CTCCTTTGAAGTGGGAAAGCATTTTCTCTCATAGGC...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGGACAATAAAGGCCTCTaGTTCAGGGTTGTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQDNKGL*FRVVLF
Trigger: GAAAAGAACAACCCTGAAGCAGAGGCCTTTATTGTC...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTCTGAGGCAGCAGTGCTaGATTCATATGTTTAGTGTG +
Preference number: 2 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPLRQQC*IHMFSV
Trigger: CACACTAAACATATGAATGCAGCACTGCTGCCTCAG...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTGAGCTGAGGCAGCAGTaGTGCATTCATATGTTTAGT +
Preference number: 2 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPELRQQ*CIHMFS
Trigger: ACTAAACATATGAATGCAGCACTGCTGCCTCAGCTC...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp AAAGTCCTCAAACGGCAGCCGGTCAACACATCGTCTTCCTCGTTAACCATGTCAGGGTCAGATGTGCACTaGTCTATGGAGCACAACAGT +
Preference number: 2 (lower is better)
Translates to: KVLKRQPVNTSSSSLTMSGSDVH*SMEHNS
Trigger: ACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCC...TGACATGGTTAACGAGGAAGACGATGTGTTGACCGGCTGCCGTTTGAGGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTCCTTGCTTTCCAAAATaGCCAGACTTCTTGCACTCT +
Preference number: 2 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPPCFPK*PDFLHS
Trigger: AGAGTGCAAGAAGTCTGGCCATTTTGGAAAGCAAGG...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTGTTTTGGCACATATCTaGAGTGCAGAACTCAAGCTC +
Preference number: 2 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPVLAHI*SAELKL
Trigger: GAGCTTGAGTTCTGCACTCCAGATATGTGCCAAAAC...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CAA 90 bp GACTGCCAGTCTGCAGAAAGCTGGACTTCGGCAATGCAGTGTGACTaGCCTATGAGAGAAAATGCTTTCCCACTTCAAAGGAGACTAGGA +
Preference number: 2 (lower is better)
Translates to: DCQSAESWTSAMQCD*PMRENAFPLQRRLG
Trigger: TCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCTCTCATAGGCAAGTCACACTGCATTGCCGAAGTCCAGCTTTCTGCAGACTGGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp GACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTGGCAGCCTGACGAGATTTTCGGCAATGCAGTGTaGCTTGCCTATGAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: DCETSMSSTNFLWQPDEIFGNAV*LAYERK
Trigger: TTTTCTCTCATAGGCAAGTCACACTGCATTGCCGAA...AATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGATGGCACACCACAACTaGATTATTTTGTGTGTTGTC +
Preference number: 2 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQMAHHN*IILCVV
Trigger: GACAACACACAAAATAATGCAGTTGTGGTGTGCCAT...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CAA 90 bp CCAAGGGGCTGTGCACATAGCATGGCACACCACAACTGCATTATTTaGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAAC +
Preference number: 2 (lower is better)
Translates to: PRGCAHSMAHHNCII*CVVCYMAKQGTTGN
Trigger: GTTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAGTTGTGGTGTGCCATGCTATGTGCACAGCCCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTAAGGGGTACATTCACTaGAAAGCTGAACAGAAAACT +
Preference number: 2 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPKGYIH*KAEQKT
Trigger: AGTTTTCTGTTCAGCTTTTCAGTGAATGTACCCCTT...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR TCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTCACTCTCAAGATTCATaGATACAGCAGTTATCTGCC +
Preference number: 2 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSHSQDS*IQQLSA
Trigger: GGCAGATAACTGCTGTATTCATGAATCTTGAGAGTG...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTATTTTGTGTGTTGTCTaGTACATGGCAAAACAAGGT +
Preference number: 2 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPILCVV*YMAKQG
Trigger: ACCTTGTTTTGCCATGTAGCAGACAACACACAAAAT...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CAA 90 bp GCTGTGCACATAGCATGGCACACCACAACTGCATTATTTTGTGTGTaGTCTGCTACATGGCAAAACAAGGTACTACTGGCAACCAAGACA +
Preference number: 2 (lower is better)
Translates to: AVHIAWHTTTALFCV*SATWQNKVLLATKT
Trigger: TGTCTTGGTTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAGTTGTGGTGTGCCATGCTATGTGCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTAGAAAAATTGAAAAATaGCTGTTCTGCTGGTTCTGT +
Preference number: 2 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSRKIEK*LFCWFC
Trigger: ACAGAACCAGCAGAACAGCCATTTTTCAATTTTTCT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR GCA 90 bp CCAAACCACAGGTATACTCTAGGTATATCTGATTCTGAAGTGCGCCACACAAGGGTCTCCAGAATGCATTaGTCTAAATCTCAAAACCTA +
Preference number: 2 (lower is better)
Translates to: PNHRYTLGISDSEVRHTRVSRMH*SKSQNL
Trigger: TAGGTTTTGAGATTTAGAGCAATGCATTCTGGAGAC...CCTTGTGTGGCGCACTTCAGAATCAGATATACCTAGAGTATACCTGTGGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CAA 90 bp AAGGTACTACTGGCAACCAAGACAATAAAGGCCTCTGCTTCAGGGTaGTTCTTTTCAGATTCCTTTAGTTACAGCAGCTTCAGTTTAGAA +
Preference number: 2 (lower is better)
Translates to: KVLLATKTIKASASG*FFSDSFSYSSFSLE
Trigger: TTCTAAACTGAAGCTGCTGTAACTAAAGGAATCTGAAAAGAACAACCCTGAAGCAGAGGCCTTTATTGTCTTGGTTGCCAGTAGTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp ACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTaGAGAGCAGGAGGCGGTCACCGTTCTCACTGGCAA +
Preference number: 3 (lower is better)
Translates to: THLTRSGNCRRP*RAGGGHRSHWQ
Trigger: TTGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp GACCAGTATGAGCAGCACCAACTTTCTCTGGCAGCCTaGCGAGATTGGGCCTGGGCACGGAGGTCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: DQYEQHQLSLAA*RDWAWARRSGL
Trigger: AAGCCCAGACCTCCGTGCCCAGGCCCAATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 72 bp GACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTaGCAGCCTGACGAGATTGGGCCTGGGCACGGAGGT +
Preference number: 3 (lower is better)
Translates to: DCETSMSSTNFL*QPDEIGPGHGG
Trigger: ACCTCCGTGCCCAGGCCCAATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 72 bp CCTCCCTCTGTTGGAAACTCCACTCATGGCTCAACATaGGCCGGGATGAACCACGTCACTGGCCAAAGGGCA +
Preference number: 3 (lower is better)
Translates to: PPSVGNSTHGST*AGMNHVTGQRA
Trigger: TGCCCTTTGGCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAACAGAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 72 bp GGCACACATTCCTCCCTCTGTTGGAAACTCCACTCATaGCTCAACATGGGCCGGGATGAACCACGTCACTGG +
Preference number: 3 (lower is better)
Translates to: GTHSSLCWKLHS*LNMGRDEPRHW
Trigger: CCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAACAGAGGGAGGAATGTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 72 bp AACACCCACCCTCTGGGTCAGATGTGCACTGCTCTATaGAGCACAACAGTCTTCCCAGACCAGTGGGGAACC +
Preference number: 3 (lower is better)
Translates to: NTHPLGQMCTAL*STTVFPDQWGT
Trigger: GGTTCCCCACTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGGGTGGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 72 bp GGCAGCCTGACGAGATTGGGCCTGGGCACGGAGGTCTaGGCTTCAGTGAGTGGAGTTGAACGATTCATTAAT +
Preference number: 3 (lower is better)
Translates to: GSLTRLGLGTEV*ASVSGVERFIN
Trigger: ATTAATGAATCGTTCAACTCCACTCACTGAAGCCCAGACCTCCGTGCCCAGGCCCAATCTCGTCAGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 72 bp AACCATGTCATCAGGTGGTTCCACACAGCACAGACATaGCTGACTCCTGTACCGCAGGTCCTTCCCGGGATA +
Preference number: 3 (lower is better)
Translates to: NHVIRWFHTAQT*LTPVPQVLPGI
Trigger: TATCCCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCACCTGATGACATGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CAA 90 bp CTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGCATGAGTCATTCCTaGCACTATCATAAAAACCCA +
Preference number: 3 (lower is better)
Translates to: LTHLTRSGNCRRPCRAGGGMSHS*HYHKNP
Trigger: TGGGTTTTTATGATAGTGCAAGGAATGACTCATGCC...GCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp CGAGATTGGGCCTGGGCACGGAGGTCTGGGCTTCAGTaGGTGGAGTTGAACGATTCATTAATGAGTCCAACG +
Preference number: 3 (lower is better)
Translates to: RDWAWARRSGLQ*VELNDSLMSPT
Trigger: CGTTGGACTCATTAATGAATCGTTCAACTCCACTCACTGAAGCCCAGACCTCCGTGCCCAGGCCCAATCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp TTGGAAACTCCACTCATGGCTCAACATGGGCCGGGATaGACCACGTCACTGGCCAAAGGGCAAACACTGTTT +
Preference number: 3 (lower is better)
Translates to: LETPLMAQHGPG*TTSLAKGQTLF
Trigger: AAACAGTGTTTGCCCTTTGGCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp GGAGTGCAGAACTCAAGCTCGCCTTGTTTTGAGCTCTaGATCTCCTGGCAGCCCTGGATGCCATTTTCATGG +
Preference number: 3 (lower is better)
Translates to: GVQNSSSPCFEL*ISWQPWMPFSW
Trigger: CCATGAAAATGGCATCCAGGGCTGCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp TCTGGGGACTCTTGTGATATGTCTGCCACTTGTGGGTaGTACGCCAGGCCTGAACCCAAAATAAGCCAACCT +
Preference number: 3 (lower is better)
Translates to: SGDSCDMSATCG*YARPEPKISQP
Trigger: AGGTTGGCTTATTTTGGGTTCAGGCCTGGCGTAGCACCCACAAGTGGCAGACATATCACAAGAGTCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp AGTTATGAACACCCACCCTCTGGGTCAGATGTGCACTaGTCTATGGAGCACAACAGTCTTCCCAGACCAGTG +
Preference number: 3 (lower is better)
Translates to: SYEHPPSGSDVH*SMEHNSLPRPV
Trigger: CACTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGGGTGGGTGTTCATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp GTAGCAGTTATGAACACCCACCCTCTGGGTCAGATGTaGACTGCTCTATGGAGCACAACAGTCTTCCCAGAC +
Preference number: 3 (lower is better)
Translates to: VAVMNTHPLGQM*TALWSTTVFPD
Trigger: GTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGGGTGGGTGTTCATAACTGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp CATATCTGGAGTGCAGAACTCAAGCTCGCCTTGTTTTaGGCTCTGAATCTCCTGGCAGCCCTGGATGCCATT +
Preference number: 3 (lower is better)
Translates to: HIWSAELKLALF*ALNLLAALDAI
Trigger: AATGGCATCCAGGGCTGCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp ATGCAGTATCTCGCCATGGCCTCAAGCTTTCTCTGGTaGACACAACAGAATCAGTCCCATGTACAAACGGGC +
Preference number: 3 (lower is better)
Translates to: MQYLAMASSFLW*TQQNQSHVQTG
Trigger: GCCCGTTTGTACATGGGACTGATTCTGTTGTGTTCACCAGAGAAAGCTTGAGGCCATGGCGAGATACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp GGGGAACCCAGGCACGAAGCTGAGCTGAGGCAGCAGTaGTGCATTCATATGTTTAGTGTGAAAAACAGAGTA +
Preference number: 3 (lower is better)
Translates to: GEPRHEAELRQQ*CIHMFSVKNRV
Trigger: TACTCTGTTTTTCACACTAAACATATGAATGCAGCACTGCTGCCTCAGCTCAGCTTCGTGCCTGGGTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 72 bp ATTCTGAAGTGCGCCACACAAGGTGAGTCGGGGTATTaGTCAGTAGACAGGGCTGAAAGGAAACCTTGCTTT +
Preference number: 3 (lower is better)
Translates to: ILKCATQGESGY*SVDRAERKPCF
Trigger: AAAGCAAGGTTTCCTTTCAGCCCTGTCTACTGACCAATACCCCGACTCACCTTGTGTGGCGCACTTCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 72 bp CAACACATCGTCTTCCTCGTTAACCATGTCATCAGGTaGTTCCACACAGCACAGACATGGCTGACTCCTGTA +
Preference number: 3 (lower is better)
Translates to: QHIVFLVNHVIR*FHTAQTWLTPV
Trigger: TACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCACCTGATGACATGGTTAACGAGGAAGACGATGTGTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CAA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGAAGGTTCACTTCCTGTaGTCCAAAGAAAAGCAAGAT +
Preference number: 3 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQKVHFL*SKEKQD
Trigger: ATCTTGCTTTTCTTTGGACAACAGGAAGTGAACCTT...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp CCAGTCTGCAGAAAGCTGGACTTCGGCAATGCAGTGTaGCTTGCCTATGAGAGAAAATGCTTTCCCACTTCA +
Preference number: 3 (lower is better)
Translates to: PVCRKLDFGNAV*LAYERKCFPTS
Trigger: TGAAGTGGGAAAGCATTTTCTCTCATAGGCAAGTCACACTGCATTGCCGAAGTCCAGCTTTCTGCAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp GCTTTTCTTTACCAGGGTCCACAAGGGAGAGCAGACTaGATTGCACAGGGTTCCCAGAATTCTAGTCTGCTA +
Preference number: 3 (lower is better)
Translates to: AFLYQGPQGRAD*IAQGSQNSSLL
Trigger: TAGCAGACTAGAATTCTGGGAACCCTGTGCAATTCAGTCTGCTCTCCCTTGTGGACCCTGGTAAAGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp CTGAACAGAAAACTGGCCAAGTGCCCTCCAACCCACTaGTCTTATCACTGGCAAAACAAGGTAAGCAAAGGT +
Preference number: 3 (lower is better)
Translates to: LNRKLAKCPPTH*SYHWQNKVSKG
Trigger: ACCTTTGCTTACCTTGTTTTGCCAGTGATAAGAGCAGTGGGTTGGAGGGCACTTGGCCAGTTTTCTGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp GGGTATTGGTCAGTAGACAGGGCTGAAAGGAAACCTTaGTTTCCAAAATGGCCAGACTTCTTGCACTCTGAG +
Preference number: 3 (lower is better)
Translates to: GYWSVDRAERKP*FPKWPDFLHSE
Trigger: CTCAGAGTGCAAGAAGTCTGGCCATTTTGGAAAGCAAGGTTTCCTTTCAGCCCTGTCTACTGACCAATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp GAACCCAGGCACGAAGCTGAGCTGAGGCAGCAGTGCTaGATTCATATGTTTAGTGTGAAAAACAGAGTATCC +
Preference number: 3 (lower is better)
Translates to: EPRHEAELRQQC*IHMFSVKNRVS
Trigger: GGATACTCTGTTTTTCACACTAAACATATGAATGCAGCACTGCTGCCTCAGCTCAGCTTCGTGCCTGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CCA 72 bp CTGGCCAAGTGCCCTCCAACCCACTGCTCTTATCACTaGCAAAACAAGGTAAGCAAAGGTTTCCCTAAAGTA +
Preference number: 3 (lower is better)
Translates to: LAKCPPTHCSYH*QNKVSKGFPKV
Trigger: TACTTTAGGGAAACCTTTGCTTACCTTGTTTTGCCAGTGATAAGAGCAGTGGGTTGGAGGGCACTTGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CAA 90 bp TATCTGGAGTGCAGAACTCAAGCTCGCCTTGTTTTGAGCTCTGAATCTCCTGGCACGAATTTCCAGAGCTaGCATTTCCTTTGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: YLECRTQARLVLSSESPGTNFQS*HFLCLG
Trigger: TCCCAAGCAAAGGAAATGCAAGCTCTGGAAATTCGT...GCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CAA 90 bp TATCTGGAGTGCAGAACTCAAGCTCGCCTTGTTTTGAGCTCTGAATCTCCTGGCTCAACTTCTCTCCACTaGTGTGCTTCCATCAGTATT +
Preference number: 3 (lower is better)
Translates to: YLECRTQARLVLSSESPGSTSLH*CASISI
Trigger: AATACTGATGGAAGCACACAAGTGGAGAGAAGTTGA...GCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp ACAACAGAATCAGTCCCATGTACAAACGGGCAGCAATaGGAAGGAAGACCCTTTCCATGTCAACTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: TTESVPCTNGQQ*EGRPFPCQLLS
Trigger: GGAGAGAAGTTGACATGGAAAGGGTCTTCCTTCTCATTGCTGCCCGTTTGTACATGGGACTGATTCTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp TTTGCTTGGGAGCATCACAGACACTTACTTAGACTGTaGGACCAGTATGAGCAGCACCAACTTTCTCTGGCA +
Preference number: 3 (lower is better)
Translates to: FAWEHHRHLLRL*DQYEQHQLSLA
Trigger: TGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTCTAAGTAAGTGTCTGTGATGCTCCCAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp CAGACTGAATTGCACAGGGTTCCCAGAATTCTAGTCTaGTATGTGCAGCAGATGATGGATGAACCACACGTA +
Preference number: 3 (lower is better)
Translates to: QTELHRVPRILV*YVQQMMDEPHV
Trigger: TACGTGTGGTTCATCCATCATCTGCTGCACATAGCAGACTAGAATTCTGGGAACCCTGTGCAATTCAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp AATTCAAAGGTGTCAAGCCCTTCAGCTAAATCTGGTTaGAAAAGGCCTAAGGGTCGTGCCCTCCTTGAACAA +
Preference number: 3 (lower is better)
Translates to: NSKVSSPSAKSG*KRPKGRALLEQ
Trigger: TTGTTCAAGGAGGGCACGACCCTTAGGCCTTTTTCAACCAGATTTAGCTGAAGGGCTTGACACCTTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp GTCCTTCCCGGGATACACAAGTTTTTAACCAGTCAATaGCCTCTAGTACGTAATTTGTTTCCTTCCCAGGTG +
Preference number: 3 (lower is better)
Translates to: VLPGIHKFLTSQ*PLVRNLFPSQV
Trigger: CACCTGGGAAGGAAACAAATTACGTACTAGAGGGCATTGACTGGTTAAAAACTTGTGTATCCCGGGAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp CCACAGATGGGAAGCCATGGCGATAGTTTTCCCAAATaGCCATTAATTCTGTCTCAGGAACACTCTCAAGAT +
Preference number: 3 (lower is better)
Translates to: PQMGSHGDSFPK*PLILSQEHSQD
Trigger: ATCTTGAGAGTGTTCCTGAGACAGAATTAATGGTCATTTGGGAAAACTATCGCCATGGCTTCCCATCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp AACTCTAAAATCGGCTACTCTTTGACAATACGACTATaGTACAAACATCAGGAGGCAGCCGCTGTGTGCATT +
Preference number: 3 (lower is better)
Translates to: NSKIGYSLTIRL*YKHQEAAAVCI
Trigger: AATGCACACAGCGGCTGCCTCCTGATGTTTGTATCATAGTCGTATTGTCAAAGAGTAGCCGATTTTAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR TCA 72 bp AATCTCCTGGCAGCCCTGGATGCCATTTTCATGGGCTaGAGTAACGAGCTGATTAATTATAAAACCAAACCA +
Preference number: 3 (lower is better)
Translates to: NLLAALDAIFMG*SNELINYKTKP
Trigger: TGGTTTGGTTTTATAATTAATCAGCTCGTTACTTCAGCCCATGAAAATGGCATCCAGGGCTGCCAGGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR-3UTR CAA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAAGCCTCTGCTTCAGGGTaGTTCTTTTCAGATTCCTTT +
Preference number: 3 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQASASG*FFSDSF
Trigger: AAAGGAATCTGAAAAGAACAACCCTGAAGCAGAGGC...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR GCA 72 bp ATGAGTCATTCCTTGCACTATCATAAAAACCCAACCTaGTACTTAACCTGTTTAGAACACACAAGTCTAGGC +
Preference number: 3 (lower is better)
Translates to: MSHSLHYHKNPT*YLTCLEHTSLG
Trigger: GCCTAGACTTGTGTGTTCTAAACAGGTTAAGTAGCAGGTTGGGTTTTTATGATAGTGCAAGGAATGACTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCACTGGCACCCTGGAGCCGGGTCTaGGCCTCCTGGCGAGACACC +
Preference number: 4 (lower is better)
Translates to: RQLPQTVQSRRRSPFSLAPWSRV*ASWRDT
Trigger: GGTGTCTCGCCAGGAGGCGCAGACCCGGCTCCAGGG...TGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp CGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCACTGGCACGGGTCTGCGCCTCCTaGCGAGACACCGGCCCCATA +
Preference number: 4 (lower is better)
Translates to: RQLPQTVQSRRRSPFSLARVCAS*RDTGPI
Trigger: TATGGGGCCGGTGTCTCGCCAGGAGGCGCAGACCCG...TGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp AGCACAGCGTCCACACCGACAGCAGTTACTAGGGGCATAGTCCTCCGGTCGCAGCAGGGGTGCCTCCAGTaGCTCCCGGCCTGGAACGCG +
Preference number: 4 (lower is better)
Translates to: STASTPTAVTRGIVLRSQQGCLQ*LPAWNA
Trigger: CGCGTTCCAGGCCGGGAGTCACTGGAGGCACCCCTG...CTGCGACCGGAGGACTATGCCCCTAGTAACTGCTGTCGGTGTGGACGCTGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCACGGAGGACATGGTGTTaGACCGGGGACTCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSRRTWC*TGDSAA
Trigger: CGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCG...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCAACTGCCGCAGACCGTaGAGAGCAGGAGGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: LTHLTRSGNCRRPCRAGGNCRRP*RAGGGH
Trigger: GTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTT...GCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCATCTGCCACTTGTGGGTaGTACGCCAGGCCTGAACCC +
Preference number: 4 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSSATCG*YARPEP
Trigger: GGGTTCAGGCCTGGCGTAGCACCCACAAGTGGCAGA...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGACGAGGAACATACCGTaGCGCTGGCCCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRTRNIP*RWPWSR
Trigger: CCGGCTCCAGGGCCAGCGCCACGGTATGTTCCTCGT...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCACTGGCAAGGGGAAAAGCCCTTTaGGCCCGTTCACTTCGCCTT +
Preference number: 4 (lower is better)
Translates to: RQLPQTVQSRRRSPFSLARGKAL*ARSLRL
Trigger: AAGGCGAAGTGAACGGGCGCAAAGGGCTTTTCCCCT...TGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGGAGCGCTCAGAGGGCTaGGCCAGCACTTTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRERSEG*ASTFLS
Trigger: CGAGAGGAAAGTGCTGGCCCAGCCCTCTGAGCGCTC...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTCCGGGGTTCTCGGGCTaGTCGGCGTCCCAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSPGFSG*SASQGC
Trigger: GCACCCCTGGGACGCCGAGCAGCCCGAGAACCCCGG...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp CGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCACCCGGGGTTCTCGGGCTaGTCGGCGTCCCAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RSCLRDLSFCSFRKQNQHPGFSG*SASQGC
Trigger: GCACCCCTGGGACGCCGAGCAGCCCGAGAACCCCGG...GTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp CTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGAGGCAGCCGCTGTGTaGATTCCAAATGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LTHLTRSGNCRRPCRAGGEAAAV*IPNVCA
Trigger: CGCACACACATTTGGAATGCACACAGCGGCTGCCTC...GCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGAGCAGTGGCCATCTaGCTCAGGCCTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSRAVAI*LRPALS
Trigger: AGACAAGGCAGGCCTGAGGCAGATGGCCACTGCTCT...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTCCCGGCAGACGGCTTTaGGGCCGAGGAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPPGRRL*GRGRAS
Trigger: AGAGGCCCTTCCTCGGCCCCAAAGCCGTCTGCCGGG...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp AGCACAGCGTCCACACCGACAGCAGTTACTAGGGGCATAGTCCTCCGGTCGCAGAAAATTAGCTGGGCGTaGTGTGCGCGCCTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: STASTPTAVTRGIVLRSQKISWA*CARLQS
Trigger: GGACTGCAGGCGCGCACACCACGCCCAGCTAATTTT...CTGCGACCGGAGGACTATGCCCCTAGTAACTGCTGTCGGTGTGGACGCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTGGGCGCAGGCTCGATaGGGGTGGTGGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPWAQAR*GWWCPG
Trigger: ACCTGGACACCACCACCCTCATCGAGCCTGCGCCCA...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR TCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGCAAGGGAGAGCAGACTaGATTGCACAGGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRQGRAD*IAQGSQ
Trigger: CTGGGAACCCTGTGCAATTCAGTCTGCTCTCCCTTG...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCCCTTGTTTTGAGCTCTaGATCTCCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSPCFEL*ISWQPW
Trigger: CCAGGGCTGCCAGGAGATTCAGAGCTCAAAACAAGG...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GTTGGAAACTCCACTCATGGCTCAACATGGGCCGGGATGAACCACGTCACTGGCCCGAGGAGTCGAACCTaGCGGAGGACATGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VGNSTHGSTWAGMNHVTGPRSRT*RRTWCW
Trigger: CCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGG...GCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTCGGGTCTGCGCCTCCTaGCGAGACACCGGCCCCATA +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSRVCAS*RDTGPI
Trigger: TATGGGGCCGGTGTCTCGCCAGGAGGCGCAGACCCG...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR TCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCCAGGGGTGCCTCCAGTaGCTCCCGGCCTGGAACGCG +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSQGCLQ*LPAWNA
Trigger: CGCGTTCCAGGCCGGGAGTCACTGGAGGCACCCCTG...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR TCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTTGGGCGCAGGCTCGATaGGGGTGGTGGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSWAQAR*GWWCPG
Trigger: ACCTGGACACCACCACCCTCATCGAGCCTGCGCCCA...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR TCA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCAATGCTTTCCGTGTGGTaGGGATCTCACAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSMLSVW*GSHKLF
Trigger: GAAAAGCTTGTGAGATCCTCACCACACGGAAAGCAT...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCAAGAAGCTCAGAGGCATaGGTCATTCCTTGCACTATC +
Preference number: 4 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSRSSEA*VIPCTI
Trigger: GATAGTGCAAGGAATGACTCATGCCTCTGAGCTTCT...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTGGCACGAAGCTGAGCTaGGGCAGCAGTGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPGTKLS*GSSAAF
Trigger: GAATGCAGCACTGCTGCCTCAGCTCAGCTTCGTGCC...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTCGCAGAGGGTGGAGTTaGGGCAGAGCTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPRRGWS*GRAQWC
Trigger: ACACCACTGAGCTCTGCCTCAACTCCACCCTCTGCG...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp AAAGTCCTCAAACGGCAGCCGGTCAACACATCGTCTTCCTCGTTAACCATGTCAGCGGCTGTCCTCGCCTaGTCTGCACGCCTTAGCCCG +
Preference number: 4 (lower is better)
Translates to: KVLKRQPVNTSSSSLTMSAAVLA*SARLSP
Trigger: CGGGCTAAGGCGTGCAGAGCAGGCGAGGACAGCCGC...TGACATGGTTAACGAGGAAGACGATGTGTTGACCGGCTGCCGTTTGAGGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTAACATACCGTGGCGCTaGCCCTGGAGCCGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSNIPWR*PWSRVC
Trigger: GCAGACCCGGCTCCAGGGCCAGCGCCACGGTATGTT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTACGAGGAACATACCGTaGCGCTGGCCCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSTRNIP*RWPWSR
Trigger: CCGGCTCCAGGGCCAGCGCCACGGTATGTTCCTCGT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCAGAGGAAAACCACAGATaGGAAGCCATGGCGATAGTT +
Preference number: 4 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSEENHR*EAMAIV
Trigger: AACTATCGCCATGGCTTCCCATCTGTGGTTTTCCTC...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCGGTCACCGTTCTCACTaGCAAGGAAGGGCTAATCTC +
Preference number: 4 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSGHRSH*QGRANL
Trigger: GAGATTAGCCCTTCCTTGCCAGTGAGAACGGTGACC...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCGGTGAGTCGGGGTATTaGTCAGTAGACAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSGESGY*SVDRAE
Trigger: TTCAGCCCTGTCTACTGACCAATACCCCGACTCACC...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCATCTCCTGGCAGCCCTaGATGCCATTTTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSISWQP*MPFSWA
Trigger: AGCCCATGAAAATGGCATCCAGGGCTGCCAGGAGAT...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTGTCGCGCCTCCGGGGTaGTTTTGCCCAGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSVAPPG*FCPACS
Trigger: GGAACAAGCTGGGCAAAAGCACCCCGGAGGCGCGAC...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGTTGGACCGGGGACTCTaGGGCGGTAGGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQLDRGL*GGRGGG
Trigger: GCCGCCGCCCCTACCGCCGCAGAGTCCCCGGTCCAA...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCCTGAGGTTGAGCGTATaGATGAGCAGGTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSLRLSV*MSRFWD
Trigger: ATCCCAGAACCTGCTCATGCATACGCTCAACCTCAG...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AGCACAGCGTCCACACCGACAGCAGTTACTAGGGGCATAGTCCTCCGGTCGCAGGTGGAACAGCAAACATaGAGTATCTCGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: STASTPTAVTRGIVLRSQVEQQT*SISPWP
Trigger: AGGCCATGGCGAGATACTGCATGTTTGCTGTTCCAC...CTGCGACCGGAGGACTATGCCCCTAGTAACTGCTGTCGGTGTGGACGCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCAAGCTTGCATTTCCTTTaGTTGGGAGCATCACAGACA +
Preference number: 4 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSSLHFL*LGASQT
Trigger: TGTCTGTGATGCTCCCAAGCAAAGGAAATGCAAGCT...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTCCGAGGAGTCGAACCTaGCGGAGGACATGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPPRSRT*RRTWCW
Trigger: CCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGG...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGAGCAGGGCCGGCAAATaGTCAAATTCCTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQSRAGK*SNSWSP
Trigger: CGGGGACCAGGAATTTGACCATTTGCCGGCCCTGCT...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTAGCAGGGCCGGCAAATaGTCAAATTCCTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPSRAGK*SNSWSP
Trigger: CGGGGACCAGGAATTTGACCATTTGCCGGCCCTGCT...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCTGCATGAGCAGGTTCTaGGATCCCATAACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LTHLTRSGNCRRPCRAGGCMSRF*DPITVG
Trigger: TCCAACAGTTATGGGATCCCAGAACCTGCTCATGCA...GCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGCAGTCTGCAGAAAGCTaGACTTCGGCAATGCAGTGT +
Preference number: 4 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRQSAES*TSAMQC
Trigger: ACACTGCATTGCCGAAGTCCAGCTTTCTGCAGACTG...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GTCACTGGCCAAAGGGCAAACACTGTTTCTAGGCAGAGTCTGGGGACTCTTGTGCACTGCACTCCAGCCTaGGTGATGCAGCGAGACACC +
Preference number: 4 (lower is better)
Translates to: VTGQRANTVSRQSLGTLVHCTPA*VMQRDT
Trigger: GGTGTCTCGCTGCATCACCCAGGCTGGAGTGCAGTG...CACAAGAGTCCCCAGACTCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCAAGAAGGTGTCTAGTCTaGGTGACCAAAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSRRCLV*VTKVLK
Trigger: TTTGAGGACTTTGGTCACCCAGACTAGACACCTTCT...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GTCACTGGCCAAAGGGCAAACACTGTTTCTAGGCAGAGTCTGGGGACTCTTGTGTGGATGGCAAAGGGGTaGTTGCTGCCCCAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: VTGQRANTVSRQSLGTLVWMAKG*LLPQEN
Trigger: GTTCTCCTGGGGCAGCAATCACCCCTTTGCCATCCA...CACAAGAGTCCCCAGACTCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTCAACATGGGCCGGGATaGACCACGTCACTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPQHGPG*TTSLAK
Trigger: TTTGGCCAGTGACGTGGTTCATCCCGGCCCATGTTG...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTCAGCACAGACATGGCTaGCTCCTGTACCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSQHRHG*LLYRRS
Trigger: GGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTG...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAGTCGCGCCTCCGGGGTaGTTTTGCCCAGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEVAPPG*FCPACS
Trigger: GGAACAAGCTGGGCAAAAGCACCCCGGAGGCGCGAC...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCCCTGGAGCCGGGTCTaGGCCTCCTGGCGAGACACC +
Preference number: 4 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQPWSRV*ASWRDT
Trigger: GGTGTCTCGCCAGGAGGCGCAGACCCGGCTCCAGGG...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp CGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCACTGGCAATGGCACACCACAACTaGATTATTTTGTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: RQLPQTVQSRRRSPFSLAMAHHN*IILCVV
Trigger: GACAACACACAAAATAATGCAGTTGTGGTGTGCCAT...TGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp CGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCACGAGCGCTCAGAGGGCTaGGCCAGCACTTTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: RSCLRDLSFCSFRKQNQHERSEG*ASTFLS
Trigger: CGAGAGGAAAGTGCTGGCCCAGCCCTCTGAGCGCTC...GTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTAGTCCCCAGGGCAGGTaGAAGAATCGCGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSSPQGR*KNRGRG
Trigger: TCCTCGTCCGCGATTCTTCCACCTGCCCTGGGGACT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGACTCATGGCTCAACATaGGCCGGGATGAACCACGTC +
Preference number: 4 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQTHGST*AGMNHV
Trigger: GACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGT...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGAGTGTGACTTGCCTATaGGAGAAAATGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRSVTCL*EKMLSH
Trigger: GTGGGAAAGCATTTTCTCTCATAGGCAAGTCACACT...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp AGCACAGCGTCCACACCGACAGCAGTTACTAGGGGCATAGTCCTCCGGTCGCAGTTCGGCAATGCAGTGTaGCTTGCCTATGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: STASTPTAVTRGIVLRSQFGNAV*LAYERK
Trigger: TTTTCTCTCATAGGCAAGTCACACTGCATTGCCGAA...CTGCGACCGGAGGACTATGCCCCTAGTAACTGCTGTCGGTGTGGACGCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAGCGCCAGGGACACATaGGCTCCCAGGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSSARDT*APRRAQ
Trigger: CTGTGCCCTCCTGGGAGCTCATGTGTCCCTGGCGCT...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GTCACTGGCCAAAGGGCAAACACTGTTTCTAGGCAGAGTCTGGGGACTCTTGTGCAAAGGGGTGATTGCTaGCCCAGGAGAACCGGAAAC +
Preference number: 4 (lower is better)
Translates to: VTGQRANTVSRQSLGTLVQRGDC*PRRTGN
Trigger: GTTTCCGGTTCTCCTGGGGCAGCAATCACCCCTTTG...CACAAGAGTCCCCAGACTCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTGGCAGCCTGACGAGATTTGGCAAAGGGGTGATTaGTGCCCCAGGAGAACCGGA +
Preference number: 4 (lower is better)
Translates to: DCETSMSSTNFLWQPDEIWQRGD*CPRRTG
Trigger: TCCGGTTCTCCTGGGGCAGCAATCACCCCTTTGCCA...AATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCTTCTCTCCACTTGTGTaGTTCCATCAGTATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LTHLTRSGNCRRPCRAGGFSPLV*FHQYFQ
Trigger: CTGGAAATACTGATGGAAGCACACAAGTGGAGAGAA...GCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AGCACAGCGTCCACACCGACAGCAGTTACTAGGGGCATAGTCCTCCGGTCGCAGCGAATTTCCAGAGCTTaGATTTCCTTTGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: STASTPTAVTRGIVLRSQRISRA*ISFAWE
Trigger: CTCCCAAGCAAAGGAAATGCAAGCTCTGGAAATTCG...CTGCGACCGGAGGACTATGCCCCTAGTAACTGCTGTCGGTGTGGACGCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCCCCAGAATTCTAGTCTaGTATGTGCAGCAGATGATG +
Preference number: 4 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSPRILV*YVQQMM
Trigger: CATCATCTGCTGCACATAGCAGACTAGAATTCTGGG...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTCCTCTGGGTCAGATGTaGACTGCTCTATGGAGCACA +
Preference number: 4 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPPLGQM*TALWST
Trigger: TGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GGCAGAGCTCAGTGGTGTCCACAGAAAGCATTAGTCTTAGGTACTATGAGAGAACGGAGGACATGGTGTTaGACCGGGGACTCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: GRAQWCPQKALVLGTMRERRTWC*TGDSAA
Trigger: CGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCG...TTCTCTCATAGTACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411769.1
CDS-3UTR CCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGTGGAAACTCCACTCATaGCTCAACATGGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQWKLHS*LNMGRD
Trigger: ATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCA...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp AGCACAGCGTCCACACCGACAGCAGTTACTAGGGGCATAGTCCTCCGGTCGCAGGTTTTGGCACATATCTaGAGTGCAGAACTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: STASTPTAVTRGIVLRSQVLAHI*SAELKL
Trigger: GAGCTTGAGTTCTGCACTCCAGATATGTGCCAAAAC...CTGCGACCGGAGGACTATGCCCCTAGTAACTGCTGTCGGTGTGGACGCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTACAAACGGGCAGCAATaGGAAGGAAGACCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPTNGQQ*EGRPFP
Trigger: TGGAAAGGGTCTTCCTTCTCATTGCTGCCCGTTTGT...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTGGCAGCCTGACGAGATTGTGCTACGCCAGGCCTaGACCCAAAATAAGCCAACC +
Preference number: 4 (lower is better)
Translates to: DCETSMSSTNFLWQPDEIVLRQA*TQNKPT
Trigger: GGTTGGCTTATTTTGGGTTCAGGCCTGGCGTAGCAC...AATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAGTGCGCCACACAAGGTaGGTCGGGGTATTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEVRHTR*VGVLVS
Trigger: ACTGACCAATACCCCGACTCACCTTGTGTGGCGCAC...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCACCCAGGCACGAAGCTaGGCTGAGGCAGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSTQARS*AEAAVL
Trigger: CAGCACTGCTGCCTCAGCTCAGCTTCGTGCCTGGGT...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAATGGCAAAGGGGTGATTaGTGCCCCAGGAGAACCGGA +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEWQRGD*CPRRTG
Trigger: TCCGGTTCTCCTGGGGCAGCAATCACCCCTTTGCCA...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGGCCTATGAGAGAAAATaGTTTCCCACTTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRAYERK*FPTSKE
Trigger: CTCCTTTGAAGTGGGAAAGCATTTTCTCTCATAGGC...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCCGTGGTGTGCGCGCCTaGAGTCCCAGCTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSRGVRA*SPSYLG
Trigger: TCCCAAGTAGCTGGGACTGCAGGCGCGCACACCACG...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGGAAAAATGGCTGTTCTaGTGGTTCTGTCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VVPHSTDMADSCTAGPSREKWLF*WFCLQN
Trigger: ATTCTGGAGACAGAACCAGCAGAACAGCCATTTTTC...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCGCCACAGCAACAAAATaGCGGACGCGGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSATATK*RTREKR
Trigger: CCGCTTCTCCCGCGTCCGCCATTTTGTTGCTGTGGC...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGAACATACCGTGGCGCTaGCCCTGGAGCCGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQNIPWR*PWSRVC
Trigger: GCAGACCCGGCTCCAGGGCCAGCGCCACGGTATGTT...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAGACAGATCCCATTGGTaGGCTTGGATACCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEDRSHW*AWIPGR
Trigger: GCGCCCAGGTATCCAAGCCCACCAATGGGATCTGTC...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGGTGTTGTCTGCTACATaGCAAAACAAGGTACTACTG +
Preference number: 4 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRVLSAT*QNKVLL
Trigger: CAGTAGTACCTTGTTTTGCCATGTAGCAGACAACAC...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGGATGAACCACGTCACTaGCCAAAGGGCAAACACTGT +
Preference number: 4 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQDEPRH*PKGKHC
Trigger: ACAGTGTTTGCCCTTTGGCCAGTGACGTGGTTCATC...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCAGGCAGGTTGGGTGCTaGGACAGATCCCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSRQVGC*DRSHWW
Trigger: CCACCAATGGGATCTGTCTCAGCACCCAACCTGCCT...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR TCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCGGCGGGTGGATCACCTaGAGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSGGWIT*SQEFET
Trigger: GGTCTCAAACTCCTGACTTCAGGTGATCCACCCGCC...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GTCACTGGCCAAAGGGCAAACACTGTTTCTAGGCAGAGTCTGGGGACTCTTGTGTTCCAGGTTATCTTCTaGTGTAGGCAGGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VTGQRANTVSRQSLGTLVFQVIF*CRQVGC
Trigger: GCACCCAACCTGCCTACAGCAGAAGATAACCTGGAA...CACAAGAGTCCCCAGACTCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CCAAACCACAGGTATACTCTAGGTATATCTGATTCTGAAGTGCGCCACACAAGGGCAGGAAGGCGAGATTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PNHRYTLGISDSEVRHTRAGRRD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCGCAATCTCGCCTTCCTGC...CCTTGTGTGGCGCACTTCAGAATCAGATATACCTAGAGTATACCTGTGGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCACCAGAAGCGGCAACTaGCGCAGACCGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSTRSGN*RRPCRA
Trigger: TGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGT...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCACCTGGCGGAGGACATaGTGTTGGACCGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSTWRRT*CWTGDS
Trigger: AGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGT...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCTCCCATTGGTGGGCTTaGATACCTGGGCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSSHWWA*IPGRRL
Trigger: GAGCCTGCGCCCAGGTATCCAAGCCCACCAATGGGA...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp GGCAGAGCTCAGTGGTGTCCACAGAAAGCATTAGTCTTAGGTACTATGAGAGAATCCCATTGGTGGGCTTaGATACCTGGGCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GRAQWCPQKALVLGTMRESHWWA*IPGRRL
Trigger: GAGCCTGCGCCCAGGTATCCAAGCCCACCAATGGGA...TTCTCTCATAGTACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411769.1
CDS-3UTR CCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCGACAGATCCCATTGGTaGGCTTGGATACCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSDRSHW*AWIPGR
Trigger: GCGCCCAGGTATCCAAGCCCACCAATGGGATCTGTC...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTAGCACCAACTTTCTCTaGCAGCCTGACGAGATTGGG +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSSTNFL*QPDEIG
Trigger: CCCAATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGTCAAGCTTTCTCTGGTaGACACAACAGAATCAGTCC +
Preference number: 4 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQSSFLW*TQQNQS
Trigger: GGACTGATTCTGTTGTGTTCACCAGAGAAAGCTTGA...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTGGCAGCCTGACGAGATTCTGAAGTCAGGAGTTTaGGACCAGCCTGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: DCETSMSSTNFLWQPDEILKSGV*DQPGQH
Trigger: ATGTTGACCAGGCTGGTCTCAAACTCCTGACTTCAG...AATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCGTGCGACTGCCAGTCTaGAGAAAGCTGGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSVRLPV*RKLDFG
Trigger: GCCGAAGTCCAGCTTTCTGCAGACTGGCAGTCGCAC...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AGCACAGCGTCCACACCGACAGCAGTTACTAGGGGCATAGTCCTCCGGTCGCAGGTCTCCAGAATGCATTaGTCTAAATCTCAAAACCTA +
Preference number: 4 (lower is better)
Translates to: STASTPTAVTRGIVLRSQVSRMH*SKSQNL
Trigger: TAGGTTTTGAGATTTAGAGCAATGCATTCTGGAGAC...CTGCGACCGGAGGACTATGCCCCTAGTAACTGCTGTCGGTGTGGACGCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTGGGTCAGATGTGCACTaGTCTATGGAGCACAACAGT +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSGSDVH*SMEHNS
Trigger: ACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCC...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGGCCACAGCAACAAAATaGCGGACGCGGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQATATK*RTREKR
Trigger: CCGCTTCTCCCGCGTCCGCCATTTTGTTGCTGTGGC...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp GACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTGGCAGCCTGACGAGATTCAGGTAGAGGAGTTGTaGTCTGAGGTTGAGCGTATG +
Preference number: 4 (lower is better)
Translates to: DCETSMSSTNFLWQPDEIQVEEL*SEVERM
Trigger: CATACGCTCAACCTCAGACCACAACTCCTCTACCTG...AATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTTCCATTCTGTGTGGATaGCAAAGGGGTGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSSILCG*QRGDCC
Trigger: GCAGCAATCACCCCTTTGCCATCCACACAGAATGGA...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR TCA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGTGGATGGCAAAGGGGTaGTTGCTGCCCCAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQWMAKG*LLPQEN
Trigger: GTTCTCCTGGGGCAGCAATCACCCCTTTGCCATCCA...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR TCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTCATTCACTGAAAAGCTaGACAGAAAACTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPHSLKS*TENWPS
Trigger: ACTTGGCCAGTTTTCTGTTCAGCTTTTCAGTGAATG...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp AAAGTCCTCAAACGGCAGCCGGTCAACACATCGTCTTCCTCGTTAACCATGTCAAGGTCTGGGCTTCAGTaGGTGGAGTTGAACGATTCA +
Preference number: 4 (lower is better)
Translates to: KVLKRQPVNTSSSSLTMSRSGLQ*VELNDS
Trigger: TGAATCGTTCAACTCCACTCACTGAAGCCCAGACCT...TGACATGGTTAACGAGGAAGACGATGTGTTGACCGGCTGCCGTTTGAGGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GTTGGAAACTCCACTCATGGCTCAACATGGGCCGGGATGAACCACGTCACTGGCCAGCAGTTATCTGCCTaGTGGAATACTGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: VGNSTHGSTWAGMNHVTGQQLSA*WNTDLK
Trigger: CTTTAAATCAGTATTCCATCAGGCAGATAACTGCTG...GCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAAGCTCGCCTTGTTTTaGGCTCTGAATCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEKLALF*ALNLLA
Trigger: TGCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTT...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTGAATTCCTATTTCCATaGTTTCCGTGTGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPEFLFP*FPCGED
Trigger: ATCCTCACCACACGGAAAGCATGGAAATAGGAATTC...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAACTGAGGTTGAGCGTATaGATGAGCAGGTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLELRLSV*MSRFWD
Trigger: ATCCCAGAACCTGCTCATGCATACGCTCAACCTCAG...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCCAAAGGGGTGATTGCTaGCCCAGGAGAACCGGAAAC +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSQRGDC*PRRTGN
Trigger: GTTTCCGGTTCTCCTGGGGCAGCAATCACCCCTTTG...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp GGCAGAGCTCAGTGGTGTCCACAGAAAGCATTAGTCTTAGGTACTATGAGAGAAAGGGGAAAAGCCCTTTaGGCCCGTTCACTTCGCCTT +
Preference number: 4 (lower is better)
Translates to: GRAQWCPQKALVLGTMRERGKAL*ARSLRL
Trigger: AAGGCGAAGTGAACGGGCGCAAAGGGCTTTTCCCCT...TTCTCTCATAGTACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411769.1
CDS-3UTR GCA 90 bp AAAGTCCTCAAACGGCAGCCGGTCAACACATCGTCTTCCTCGTTAACCATGTCAAAATGTGTGTGCGACTaGCAGTCTGCAGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KVLKRQPVNTSSSSLTMSKCVCD*QSAESW
Trigger: CCAGCTTTCTGCAGACTGGCAGTCGCACACACATTT...TGACATGGTTAACGAGGAAGACGATGTGTTGACCGGCTGCCGTTTGAGGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCCATAAAAACCCAACCTaGTACTTAACCTGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSHKNPT*YLTCLE
Trigger: TTCTAAACAGGTTAAGTAGCAGGTTGGGTTTTTATG...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAGGCACATATCTGGAGTaGAGAACTCAAGCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEGTYLE*RTQARL
Trigger: AAGGCGAGCTTGAGTTCTGCACTCCAGATATGTGCC...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTAGAGACCTGTCCTTCTaGTCCTTTAGAAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPRDLSF*SFRKQN
Trigger: GTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCT...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGAAATGGTCAAATTCCTaGTCCCCGATCTTAAAACGG +
Preference number: 4 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQKWSNS*SPILKR
Trigger: CCGTTTTAAGATCGGGGACCAGGAATTTGACCATTT...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp CGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCACCAGGTAGAGGAGTTGTaGTCTGAGGTTGAGCGTATG +
Preference number: 4 (lower is better)
Translates to: RSCLRDLSFCSFRKQNQHQVEEL*SEVERM
Trigger: CATACGCTCAACCTCAGACCACAACTCCTCTACCTG...GTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp AAAGTCCTCAAACGGCAGCCGGTCAACACATCGTCTTCCTCGTTAACCATGTCAAATACAAAAATTAGCTaGGCGTGGTGTGCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: KVLKRQPVNTSSSSLTMSNTKIS*AWCARL
Trigger: CAGGCGCGCACACCACGCCCAGCTAATTTTTGTATT...TGACATGGTTAACGAGGAAGACGATGTGTTGACCGGCTGCCGTTTGAGGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAACTTTCTCTGGCAGCCTaGCGAGATTGGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQLSLAA*RDWAWA
Trigger: TGCCCAGGCCCAATCTCGTCAGGCTGCCAGAGAAAG...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp AAAGTCCTCAAACGGCAGCCGGTCAACACATCGTCTTCCTCGTTAACCATGTCACACTTACTTAGACTGTaGGACCAGTATGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KVLKRQPVNTSSSSLTMSHLLRL*DQYEQH
Trigger: GTGCTGCTCATACTGGTCTCACAGTCTAAGTAAGTG...TGACATGGTTAACGAGGAAGACGATGTGTTGACCGGCTGCCGTTTGAGGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CTTGGGAGCATCACAGACACTTACTTAGACTGTGAGACCAGTATGAGCAGCACCGCAGCAGATGATGGATaGACCACACGTATATACCAG +
Preference number: 4 (lower is better)
Translates to: LGSITDTYLDCETSMSSTAADDG*TTRIYQ
Trigger: CTGGTATATACGTGTGGTTCATCCATCATCTGCTGC...GGTGCTGCTCATACTGGTCTCACAGTCTAAGTAAGTGTCTGTGATGCTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAACGCAGAGGGTGGAGTTaGGGCAGAGCTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQRRGWS*GRAQWC
Trigger: ACACCACTGAGCTCTGCCTCAACTCCACCCTCTGCG...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTACTCTTTTCTGGATTaGTTTCGCAAAGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPYSFLD*FRKDRS
Trigger: GGACCTGTCTTTGCGAAAGCAATCCAGAAAAGAGTA...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAGAGAGCAGACTGAATTaGACAGGGTTCCCAGAATTC +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEESRLN*TGFPEF
Trigger: GAATTCTGGGAACCCTGTGCAATTCAGTCTGCTCTC...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAAACCTGGCGGAGGACATaGTGTTGGACCGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQTWRRT*CWTGDS
Trigger: AGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGT...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTACTTCGCCTTCCCACTaGCCATTTATATTCATCCTT +
Preference number: 4 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPTSPSH*PFIFIL
Trigger: AAGGATGAATATAAATGGCCAGTGGGAAGGCGAAGT...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCACTCGTTTTCATCTaGGTTTTGAGGGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPSLVFI*VLRVKD
Trigger: ATCTTTGACCCTCAAAACCCAGATGAAAACGAGTGA...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp TATCTGGAGTGCAGAACTCAAGCTCGCCTTGTTTTGAGCTCTGAATCTCCTGGCGCTGTGCACATAGCATaGCACACCACAACTGCATTA +
Preference number: 4 (lower is better)
Translates to: YLECRTQARLVLSSESPGAVHIA*HTTTAL
Trigger: TAATGCAGTTGTGGTGTGCCATGCTATGTGCACAGC...GCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCTTCCAGGTTATCTTCTaGTGTAGGCAGGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSFQVIF*CRQVGC
Trigger: GCACCCAACCTGCCTACAGCAGAAGATAACCTGGAA...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp GCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAGGAAATGGCAGCTAAGCCACTaGTTTGTGGAACAGCAAACA +
Preference number: 4 (lower is better)
Translates to: AFPLQRRLGQAEQQSSRKWQLSH*FVEQQT
Trigger: TGTTTGCTGTTCCACAAAGCAGTGGCTTAGCTGCCA...TTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAATACTCAGTAGGCTGCTaGTACATTTCTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEYSVGC*YISRSA
Trigger: AGCAGACCTAGAAATGTAGCAGCAGCCTACTGAGTA...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAGGAAAAATGGCCAGACTTCTTaGACTCTGAGTCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: AFPLQRRLGQAEQQSSRKNGQTS*TLSQLL
Trigger: CAGCAGTTGACTCAGAGTGCAAGAAGTCTGGCCATT...TTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCTATCTGATTCTGAAGTaGGCCACACAAGGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSYLILK*ATQGES
Trigger: CGACTCACCTTGTGTGGCGCACTTCAGAATCAGATA...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp TGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTGGATCCCATAACTGTTaGAATTCCTATTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: CSSCRDNDPVSETCPSAPGSHNC*NSYFHA
Trigger: AGCATGGAAATAGGAATTCCAACAGTTATGGGATCC...AGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CTTGGGAGCATCACAGACACTTACTTAGACTGTGAGACCAGTATGAGCAGCACCCCTTGCTTTCCAAAATaGCCAGACTTCTTGCACTCT +
Preference number: 4 (lower is better)
Translates to: LGSITDTYLDCETSMSSTPCFPK*PDFLHS
Trigger: AGAGTGCAAGAAGTCTGGCCATTTTGGAAAGCAAGG...GGTGCTGCTCATACTGGTCTCACAGTCTAAGTAAGTGTCTGTGATGCTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GGCAGAGCTCAGTGGTGTCCACAGAAAGCATTAGTCTTAGGTACTATGAGAGAAATGCTTTCCGTGTGGTaGGGATCTCACAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GRAQWCPQKALVLGTMREMLSVW*GSHKLF
Trigger: GAAAAGCTTGTGAGATCCTCACCACACGGAAAGCAT...TTCTCTCATAGTACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411769.1
CDS-3UTR TCA 90 bp GACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTGGCAGCCTGACGAGATTTTGACAATACGACTATaGTACAAACATCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DCETSMSSTNFLWQPDEILTIRL*YKHQEA
Trigger: TGCCTCCTGATGTTTGTATCATAGTCGTATTGTCAA...AATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTAGTCCAACGATTCTATaGACAACGCCACTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSSPTIL*TTPLFK
Trigger: CTTAAAAAGTGGCGTTGTTCATAGAATCGTTGGACT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCGTGTTCACTATGAGCTaGGGCTTTTCTTTACCAGGG +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSVFTMS*GFSLPG
Trigger: CCCTGGTAAAGAAAAGCCTCAGCTCATAGTGAACAC...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCACCACAGTCACAGCAGATaGTCAGTAAATGAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: RSCLRDLSFCSFRKQNQHHSHSR*SVNESY
Trigger: GTAGCTTTCATTTACTGATCATCTGCTGTGACTGTG...GTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CTTGGGAGCATCACAGACACTTACTTAGACTGTGAGACCAGTATGAGCAGCACCGCCATTTTCATGGGCTaGAGTAACGAGCTGATTAAT +
Preference number: 4 (lower is better)
Translates to: LGSITDTYLDCETSMSSTAIFMG*SNELIN
Trigger: ATTAATCAGCTCGTTACTTCAGCCCATGAAAATGGC...GGTGCTGCTCATACTGGTCTCACAGTCTAAGTAAGTGTCTGTGATGCTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TATCTGGAGTGCAGAACTCAAGCTCGCCTTGTTTTGAGCTCTGAATCTCCTGGCGAATTCCTATTTCCATaGTTTCCGTGTGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: YLECRTQARLVLSSESPGEFLFP*FPCGED
Trigger: ATCCTCACCACACGGAAAGCATGGAAATAGGAATTC...GCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAGACAATAAAGGCCTCTaGTTCAGGGTTGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEDNKGL*FRVVLF
Trigger: GAAAAGAACAACCCTGAAGCAGAGGCCTTTATTGTC...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCGAGCTGAGGCAGCAGTaGTGCATTCATATGTTTAGT +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSELRQQ*CIHMFS
Trigger: ACTAAACATATGAATGCAGCACTGCTGCCTCAGCTC...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GGCAGAGCTCAGTGGTGTCCACAGAAAGCATTAGTCTTAGGTACTATGAGAGAATGCATGAGCAGGTTCTaGGATCCCATAACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GRAQWCPQKALVLGTMRECMSRF*DPITVG
Trigger: TCCAACAGTTATGGGATCCCAGAACCTGCTCATGCA...TTCTCTCATAGTACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411769.1
CDS-3UTR CCA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGTCCATTCTGTGTGGATaGCAAAGGGGTGATTGCTGC +
Preference number: 4 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQSILCG*QRGDCC
Trigger: GCAGCAATCACCCCTTTGCCATCCACACAGAATGGA...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAACACACAGCACAGACATaGCTGACTCCTGTACCGCAG +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQHTAQT*LTPVPQ
Trigger: CTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTG...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAACCATGTCATCAGGTaGTTCCACACAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSNHVIR*FHTAQT
Trigger: TGTCTGTGCTGTGTGGAACCACCTGATGACATGGTT...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAAACATCACAAGAGCAGTaGCCATCTGCCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQTSQEQ*PSASGL
Trigger: CAGGCCTGAGGCAGATGGCCACTGCTCTTGTGATGT...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CAA 72 bp TCTGCAGAAAGCTGGACTTCGGCAATGCAGTGTGACTaGCCTATGAGAGAAAATGCTTTCCCACTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SAESWTSAMQCD*PMRENAFPLQR
Trigger: CCTTTGAAGTGGGAAAGCATTTTCTCTCATAGGCAAGTCACACTGCATTGCCGAAGTCCAGCTTTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTTTATATTCATCCTTGTaGCTTTCACGATGTCACCAA +
Preference number: 4 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSLYSSL*LSRCHQ
Trigger: TTGGTGACATCGTGAAAGTCACAAGGATGAATATAA...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR TCA 90 bp GACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTGGCAGCCTGACGAGATTAAATCGGCTACTCTTTaGCAATACGACTATGATACA +
Preference number: 4 (lower is better)
Translates to: DCETSMSSTNFLWQPDEIKSATL*QYDYDT
Trigger: TGTATCATAGTCGTATTGTCAAAGAGTAGCCGATTT...AATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CACTGGCAAAACAAGGTAAGCAAAGGTTTCCCTAAAGTACCCCCAACTCTGATGTCAGCTTTCCAAACATaGGCACAGAAGGTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: HWQNKVSKGFPKVPPTLMSAFQT*AQKVSS
Trigger: ACTAGACACCTTCTGTGCTCATGTTTGGAAAGCTGA...CATCAGAGTTGGGGGTACTTTAGGGAAACCTTTGCTTACCTTGTTTTGCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCTACTCTTTTCTGGATTaGTTTCGCAAAGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSYSFLD*FRKDRS
Trigger: GGACCTGTCTTTGCGAAAGCAATCCAGAAAAGAGTA...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR GCA 90 bp GACTGTGAGACCAGTATGAGCAGCACCAACTTTCTCTGGCAGCCTGACGAGATTATTTTGTGTGTTGTCTaGTACATGGCAAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: DCETSMSSTNFLWQPDEIILCVV*YMAKQG
Trigger: ACCTTGTTTTGCCATGTAGCAGACAACACACAAAAT...AATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAAAGAAAACTGGCCAAGTaGCCTCCAACCCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQRKLAK*PPTHCS
Trigger: AGAGCAGTGGGTTGGAGGGCACTTGGCCAGTTTTCT...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCGCTGAAAGGAAACCTTaGTTTCCAAAATGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSAERKP*FPKWPD
Trigger: GTCTGGCCATTTTGGAAAGCAAGGTTTCCTTTCAGC...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCAGAGACCTGTCCTTCTaGTCCTTTAGAAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSRDLSF*SFRKQN
Trigger: GTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCT...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCAAATGGTCAAATTCCTaGTCCCCGATCTTAAAACGG +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSKWSNS*SPILKR
Trigger: CCGTTTTAAGATCGGGGACCAGGAATTTGACCATTT...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCGGATCCCATAACTGTTaGAATTCCTATTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSGSHNC*NSYFHA
Trigger: AGCATGGAAATAGGAATTCCAACAGTTATGGGATCC...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp CCAAACCACAGGTATACTCTAGGTATATCTGATTCTGAAGTGCGCCACACAAGGACTTCGCCTTCCCACTaGCCATTTATATTCATCCTT +
Preference number: 4 (lower is better)
Translates to: PNHRYTLGISDSEVRHTRTSPSH*PFIFIL
Trigger: AAGGATGAATATAAATGGCCAGTGGGAAGGCGAAGT...CCTTGTGTGGCGCACTTCAGAATCAGATATACCTAGAGTATACCTGTGGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp GCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAGGAAATCACTCGTTTTCATCTaGGTTTTGAGGGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: AFPLQRRLGQAEQQSSRKSLVFI*VLRVKD
Trigger: ATCTTTGACCCTCAAAACCCAGATGAAAACGAGTGA...TTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCTGCATTTCCTTTGCTTaGGAGCATCACAGACACTTA +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSCISFA*EHHRHL
Trigger: TAAGTGTCTGTGATGCTCCCAAGCAAAGGAAATGCA...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CCA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGAAATGGCTGTTCTGCTaGTTCTGTCTCCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQKWLFC*FCLQNA
Trigger: TGCATTCTGGAGACAGAACCAGCAGAACAGCCATTT...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CAA 72 bp CTGGCAACCAAGACAATAAAGGCCTCTGCTTCAGGGTaGTTCTTTTCAGATTCCTTTAGTTACAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LATKTIKASASG*FFSDSFSYSSF
Trigger: GAAGCTGCTGTAACTAAAGGAATCTGAAAAGAACAACCCTGAAGCAGAGGCCTTTATTGTCTTGGTTGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCTTATATTCATCCTTGTaGCTTTCACGATGTCACCAA +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSLYSSL*LSRCHQ
Trigger: TTGGTGACATCGTGAAAGTCACAAGGATGAATATAA...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR TCA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCACTCTCAAGATTCATaGATACAGCAGTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQHSQDS*IQQLSA
Trigger: GGCAGATAACTGCTGTATTCATGAATCTTGAGAGTG...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CAA 72 bp ATAGCATGGCACACCACAACTGCATTATTTTGTGTGTaGTCTGCTACATGGCAAAACAAGGTACTACTGGCA +
Preference number: 4 (lower is better)
Translates to: IAWHTTTALFCV*SATWQNKVLLA
Trigger: TGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAGTTGTGGTGTGCCATGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CAA 72 bp TGTGCACATAGCATGGCACACCACAACTGCATTATTTaGTGTGTTGTCTGCTACATGGCAAAACAAGGTACT +
Preference number: 4 (lower is better)
Translates to: CAHSMAHHNCII*CVVCYMAKQGT
Trigger: AGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAGTTGTGGTGTGCCATGCTATGTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAATCAGCTAAATCTGGTTaGAAAAGGCCTAAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQSAKSG*KRPKGR
Trigger: ACGACCCTTAGGCCTTTTTCAACCAGATTTAGCTGA...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCTTCATATGTTTAGTGTaGAAAACAGAGTATCCCTGC +
Preference number: 4 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSFICLV*KTEYPC
Trigger: GCAGGGATACTCTGTTTTTCACACTAAACATATGAA...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAAAGCTACTCAGTAGGCTaGTGCTACATTTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQSYSVG*CYISRS
Trigger: AGACCTAGAAATGTAGCAGCAGCCTACTGAGTAGCT...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAACTGAGGCAGCAGTGCTaGATTCATATGTTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQLRQQC*IHMFSV
Trigger: CACACTAAACATATGAATGCAGCACTGCTGCCTCAG...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp GGCAGAGCTCAGTGGTGTCCACAGAAAGCATTAGTCTTAGGTACTATGAGAGAATACTATGAGAGAAAATaGTTTCCCACTTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRAQWCPQKALVLGTMREYYERK*FPTSKE
Trigger: CTCCTTTGAAGTGGGAAAGCATTTTCTCTCATAGTA...TTCTCTCATAGTACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411769.1
CDS-3UTR CCA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCAGAAAAATTGAAAAATaGCTGTTCTGCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: NDPVSETCPSAPLENRTSRKIEK*LFCWFC
Trigger: ACAGAACCAGCAGAACAGCCATTTTTCAATTTTTCT...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR TCA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAAAAGGGGTACATTCACTaGAAAGCTGAACAGAAAACT +
Preference number: 4 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQKGYIH*KAEQKT
Trigger: AGTTTTCTGTTCAGCTTTTCAGTGAATGTACCCCTT...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR GCA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGTTTTTAACCAGTCAATaGCCTCTAGTACGTAATTTG +
Preference number: 4 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQFLTSQ*PLVRNL
Trigger: CAAATTACGTACTAGAGGGCATTGACTGGTTAAAAA...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354336.8
3UTR CAA 72 bp AAGTTTTTAACCAGTCAATGCCCTCTAGTACGTAATTaGTTTCCTTCCCAGGTGAAAAACCATAGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: KFLTSQCPLVRN*FPSQVKNHSEL
Trigger: TAACTCACTATGGTTTTTCACCTGGGAAGGAAACAAATTACGTACTAGAGGGCATTGACTGGTTAAAAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS CCA 90 bp AGGCGGAGCGGTCCGAGGAGTCGAACCTGGCGGAGGACATGGTGTTaGACCGGGGACTCTGCGGCGGTAGGGGCGGCGGCTGTCCTCGCC +
Preference number: 5 (lower is better)
Translates to: RRSGPRSRTWRRTWC*TGDSAAVGAAAVLA
Trigger: GGCGAGGACAGCCGCCGCCCCTACCGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGGACCGCTCCGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 90 bp GCCGAGGAAGGGCCTCTCGCACACCTCGAGGAGCGCTCAGAGGGCTaGGCCAGCACTTTCCTCTCGGCTCCGGGCCCGCAGCATCCTCCG +
Preference number: 5 (lower is better)
Translates to: AEEGPLAHLEERSEG*ASTFLSAPGPQHPP
Trigger: CGGAGGATGCTGCGGGCCCGGAGCCGAGAGGAAAGTGCTGGCCCAGCCCTCTGAGCGCTCCTCGAGGTGTGCGAGAGGCCCTTCCTCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 90 bp CCAGGGCAGGTGGAAGAATCGCGGACGAGGAACATACCGTGGCGCTaGCCCTGGAGCCGGGTCTGCGCCTCCTGGCGAGACACCGGCCCC +
Preference number: 5 (lower is better)
Translates to: PGQVEESRTRNIPWR*PWSRVCASWRDTGP
Trigger: GGGGCCGGTGTCTCGCCAGGAGGCGCAGACCCGGCTCCAGGGCCAGCGCCACGGTATGTTCCTCGTCCGCGATTCTTCCACCTGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS GCA 90 bp GAGGAGTCGAACCTGGCGGAGGACATGGTGTTGGACCGGGGACTCTaGGGCGGTAGGGGCGGCGGCTGTCCTCGCCTGCTCTGCACGCCT +
Preference number: 5 (lower is better)
Translates to: EESNLAEDMVLDRGL*GGRGGGCPRLLCTP
Trigger: AGGCGTGCAGAGCAGGCGAGGACAGCCGCCGCCCCTACCGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 90 bp TATACCAGGCGGAGCGGTCCGAGGAGTCGAACCTGGCGGAGGACATaGTGTTGGACCGGGGACTCTGCGGCGGTAGGGGCGGCGGCTGTC +
Preference number: 5 (lower is better)
Translates to: YTRRSGPRSRTWRRT*CWTGDSAAVGAAAV
Trigger: GACAGCCGCCGCCCCTACCGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGGACCGCTCCGCCTGGTATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 90 bp ACACCGGCCCCATATACCAGGCGGAGCGGTCCGAGGAGTCGAACCTaGCGGAGGACATGGTGTTGGACCGGGGACTCTGCGGCGGTAGGG +
Preference number: 5 (lower is better)
Translates to: TPAPYTRRSGPRSRT*RRTWCWTGDSAAVG
Trigger: CCCTACCGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGGACCGCTCCGCCTGGTATATGGGGCCGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 90 bp CAGGTGGAAGAATCGCGGACGAGGAACATACCGTGGCGCTGGCCCTaGAGCCGGGTCTGCGCCTCCTGGCGAGACACCGGCCCCATATAC +
Preference number: 5 (lower is better)
Translates to: QVEESRTRNIPWRWP*SRVCASWRDTGPIY
Trigger: GTATATGGGGCCGGTGTCTCGCCAGGAGGCGCAGACCCGGCTCCAGGGCCAGCGCCACGGTATGTTCCTCGTCCGCGATTCTTCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp GTGGTTCCACACAGCACAGACATGGCTGACTCCTGTACCGCAGGTCCTTCCCGGGCGGAGGACATGGTGTaGGACCGGGGACTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: VVPHSTDMADSCTAGPSRAEDMV*DRGLCG
Trigger: GCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGC...CCGGGAAGGACCTGCGGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp CGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCACTGGCAAAGGGGAAAAGCCCTTaGCGCCCGTTCACTTCGCCT +
Preference number: 5 (lower is better)
Translates to: RQLPQTVQSRRRSPFSLAKGKSP*RPFTSP
Trigger: AGGCGAAGTGAACGGGCGCAAAGGGCTTTTCCCCTT...TGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAGCCCGGCAGACGGCTTaGGGGCCGAGGAAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEARQTA*GPRKGL
Trigger: GAGGCCCTTCCTCGGCCCCAAAGCCGTCTGCCGGGC...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp CTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCCTGCAGGTAGAGGAGTaGTGGTCTGAGGTTGAGCGT +
Preference number: 5 (lower is better)
Translates to: LTHLTRSGNCRRPCRAGGLQVEE*WSEVER
Trigger: ACGCTCAACCTCAGACCACAACTCCTCTACCTGCAG...GCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCAAAATGGCCAGACTTCTaGCACTCTGAGTCAACTGCT +
Preference number: 5 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSKWPDF*HSESTA
Trigger: AGCAGTTGACTCAGAGTGCAAGAAGTCTGGCCATTT...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp GCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAGGAAAGCGGAGGACATGGTGTaGGACCGGGGACTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: AFPLQRRLGQAEQQSSRKAEDMV*DRGLCG
Trigger: GCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGC...TTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp TATCTGGAGTGCAGAACTCAAGCTCGCCTTGTTTTGAGCTCTGAATCTCCTGGCCCAACCCGGCCATCCTaGTTCCGGGCACTCCACCAC +
Preference number: 5 (lower is better)
Translates to: YLECRTQARLVLSSESPGPTRPS*FRALHH
Trigger: GTGGTGGAGTGCCCGGAACAAGGATGGCCGGGTTGG...GCCAGGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCATTGCATTTCCTTTGCTaGGGAGCATCACAGACACTT +
Preference number: 5 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSLHFLC*GASQTL
Trigger: AAGTGTCTGTGATGCTCCCAAGCAAAGGAAATGCAA...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp AGCCAACCTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCTGCCTCAGGCCTGCCTaGTCTGTAAACAGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: SQPDTPNQKRQLPQTVQSCLRPA*SVNSCK
Trigger: TTTACAGCTGTTTACAGACAAGGCAGGCCTGAGGCA...GCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS TCA 90 bp CCGTACATATTCCAGGTTATCTTCTGCTGTAGGCAGGTTGGGTGCTaGGACAGATCCCATTGGTGGGCTTGGATACCTGGGCGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PYIFQVIFCCRQVGC*DRSHWWAWIPGRRL
Trigger: GAGCCTGCGCCCAGGTATCCAAGCCCACCAATGGGATCTGTCTCAGCACCCAACCTGCCTACAGCAGAAGATAACCTGGAATATGTACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp GCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAGGAAACCAACCCGGCCATCCTaGTTCCGGGCACTCCACCAC +
Preference number: 5 (lower is better)
Translates to: AFPLQRRLGQAEQQSSRKPTRPS*FRALHH
Trigger: GTGGTGGAGTGCCCGGAACAAGGATGGCCGGGTTGG...TTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp CAAGGCCACTGTTCCTCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTCTGCAGGTAGAGGAGTaGTGGTCTGAGGTTGAGCGT +
Preference number: 5 (lower is better)
Translates to: QGHCSSCRDNDPVSETCPLQVEE*WSEVER
Trigger: ACGCTCAACCTCAGACCACAACTCCTCTACCTGCAG...AGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGAGGAACAGTGGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp AAAGTCCTCAAACGGCAGCCGGTCAACACATCGTCTTCCTCGTTAACCATGTCATGCAGGAAGGCGAGATaGCGCCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: KVLKRQPVNTSSSSLTMSCRKAR*RHCTPA
Trigger: GGCTGGAGTGCAGTGGCGCAATCTCGCCTTCCTGCA...TGACATGGTTAACGAGGAAGACGATGTGTTGACCGGCTGCCGTTTGAGGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp CAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCGGTCACCGTTCTCACCTCTAGTACGTAATTaGTTTCCTTCCCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: QKRQLPQTVQSRRRSPFSPLVRN*FPSQVK
Trigger: TTTCACCTGGGAAGGAAACAAATTACGTACTAGAGG...TGAGAACGGTGACCGCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGGTGCTTTTGCCCAGCTaGTTCCCAATAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQVLLPS*FPIATA
Trigger: TGCTGTGGCTATTGGGAACAAGCTGGGCAAAAGCAC...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGAGTTGTGGTCTGAGGTaGAGCGTATGCATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQSCGLR*SVCMSR
Trigger: CCTGCTCATGCATACGCTCAACCTCAGACCACAACT...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp AGCACAGCGTCCACACCGACAGCAGTTACTAGGGGCATAGTCCTCCGGTCGCAGACACGTATATACCAGTaGGCTTGTATGAACAGGCCT +
Preference number: 5 (lower is better)
Translates to: STASTPTAVTRGIVLRSQTRIYQ*ACMNRP
Trigger: AGGCCTGTTCATACAAGCCAACTGGTATATACGTGT...CTGCGACCGGAGGACTATGCCCCTAGTAACTGCTGTCGGTGTGGACGCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS TCA 90 bp TTGCTTTCGCAAAGACAGGTCCATTCTGTGTGGATGGCAAAGGGGTaGTTGCTGCCCCAGGAGAACCGGAAACTGCAGGTAGAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: LLSQRQVHSVWMAKG*LLPQENRKLQVEEL
Trigger: CAACTCCTCTACCTGCAGTTTCCGGTTCTCCTGGGGCAGCAATCACCCCTTTGCCATCCACACAGAATGGACCTGTCTTTGCGAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAGCCTCCGGGGTGCTTTaGCCCAGCTTGTTCCCAATA +
Preference number: 5 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEASGVL*PSLFPI
Trigger: TATTGGGAACAAGCTGGGCAAAAGCACCCCGGAGGC...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp GCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAGGAAAATCCCATTGGTGGGCTaGGATACCTGGGCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: AFPLQRRLGQAEQQSSRKIPLVG*DTWAQA
Trigger: AGCCTGCGCCCAGGTATCCAAGCCCACCAATGGGAT...TTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp TCCTGTAGGGACAACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAAGGGGAAAAGCCCTTaGCGCCCGTTCACTTCGCCT +
Preference number: 5 (lower is better)
Translates to: SCRDNDPVSETCPSAPLEKGKSP*RPFTSP
Trigger: AGGCGAAGTGAACGGGCGCAAAGGGCTTTTCCCCTT...TTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTTGTCCCTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp CTGACACACCTAACCAGAAGCGGCAACTGCCGCAGACCGTGCAGAGCAGGAGGCTATATACCAGTTGGCTaGTATGAACAGGCCTCTTTT +
Preference number: 5 (lower is better)
Translates to: LTHLTRSGNCRRPCRAGGYIPVG*YEQASF
Trigger: AAAAGAGGCCTGTTCATACAAGCCAACTGGTATATA...GCCTCCTGCTCTGCACGGTCTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp GTCACTGGCCAAAGGGCAAACACTGTTTCTAGGCAGAGTCTGGGGACTCTTGTGATCTTAAAACGGCGGTaGGGCAGCGAGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: VTGQRANTVSRQSLGTLVILKRR*GSELMM
Trigger: CATCATCAACTCGCTGCCCAACCGCCGTTTTAAGAT...CACAAGAGTCCCCAGACTCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp GGCAGAGCTCAGTGGTGTCCACAGAAAGCATTAGTCTTAGGTACTATGAGAGAAATCCCATTGGTGGGCTaGGATACCTGGGCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GRAQWCPQKALVLGTMREIPLVG*DTWAQA
Trigger: AGCCTGCGCCCAGGTATCCAAGCCCACCAATGGGAT...TTCTCTCATAGTACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411769.1
CDS-3UTR CAA 90 bp GTTGGAAACTCCACTCATGGCTCAACATGGGCCGGGATGAACCACGTCACTGGCGCAATGCAGTGTGACTaGCCTATGAGAGAAAATGCT +
Preference number: 5 (lower is better)
Translates to: VGNSTHGSTWAGMNHVTGAMQCD*PMRENA
Trigger: AGCATTTTCTCTCATAGGCAAGTCACACTGCATTGC...GCCAGTGACGTGGTTCATCCCGGCCCATGTTGAGCCATGAGTGGAGTTTCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp GGCAGAGCTCAGTGGTGTCCACAGAAAGCATTAGTCTTAGGTACTATGAGAGAAGCCTCCGGGGTGCTTTaGCCCAGCTTGTTCCCAATA +
Preference number: 5 (lower is better)
Translates to: GRAQWCPQKALVLGTMREASGVL*PSLFPI
Trigger: TATTGGGAACAAGCTGGGCAAAAGCACCCCGGAGGC...TTCTCTCATAGTACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411769.1
CDS-3UTR CAA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTATCTTAAAACGGCGGTaGGGCAGCGAGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSILKRR*GSELMM
Trigger: CATCATCAACTCGCTGCCCAACCGCCGTTTTAAGAT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp GCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAGGAAACTGAGACAGATCCCATaGGTGGGCTTGGATACCTGG +
Preference number: 5 (lower is better)
Translates to: AFPLQRRLGQAEQQSSRKLRQIP*VGLDTW
Trigger: CCAGGTATCCAAGCCCACCAATGGGATCTGTCTCAG...TTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 90 bp GTAAAGGGGAAAAGCCCTTTGCGCCCGTTCACTTCGCCTTCCCACTaGCCATTTATATTCATCCTTGTGACTTTCACGATGTCACCAACC +
Preference number: 5 (lower is better)
Translates to: VKGKSPLRPFTSPSH*PFIFILVTFTMSPT
Trigger: GGTTGGTGACATCGTGAAAGTCACAAGGATGAATATAAATGGCCAGTGGGAAGGCGAAGTGAACGGGCGCAAAGGGCTTTTCCCCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCCTGAGACAGATCCCATaGGTGGGCTTGGATACCTGG +
Preference number: 5 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSLRQIP*VGLDTW
Trigger: CCAGGTATCCAAGCCCACCAATGGGATCTGTCTCAG...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp AACGATCCTGTCTCAGAGACCTGTCCTTCTGCTCCTTTAGAAAACAGAACCAGCAGTTGTGGTCTGAGGTaGAGCGTATGCATGAGCAGG +
Preference number: 5 (lower is better)
Translates to: NDPVSETCPSAPLENRTSSCGLR*SVCMSR
Trigger: CCTGCTCATGCATACGCTCAACCTCAGACCACAACT...GCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp GTCACTGGCCAAAGGGCAAACACTGTTTCTAGGCAGAGTCTGGGGACTCTTGTGGTACTCTTTTCTGGATaGCTTTCGCAAAGACAGGTC +
Preference number: 5 (lower is better)
Translates to: VTGQRANTVSRQSLGTLVVLFSG*LSQRQV
Trigger: GACCTGTCTTTGCGAAAGCAATCCAGAAAAGAGTAC...CACAAGAGTCCCCAGACTCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp GTCACTGGCCAAAGGGCAAACACTGTTTCTAGGCAGAGTCTGGGGACTCTTGTGACGAATTTCCAGAGCTaGCATTTCCTTTGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: VTGQRANTVSRQSLGTLVTNFQS*HFLCLG
Trigger: TCCCAAGCAAAGGAAATGCAAGCTCTGGAAATTCGT...CACAAGAGTCCCCAGACTCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTATGGAAACAAGGGTTTaGATGCTGGGACCAGTAACG +
Preference number: 5 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSMETRV*MLGPVT
Trigger: CGTTACTGGTCCCAGCATCAAAACCCTTGTTTCCAT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS GCA 90 bp TGCCAAGGCAGTCTTGTCATAAGCACAGGGTACTCTTTTCTGGATTaGTTTCGCAAAGACAGGTCCATTCTGTGTGGATGGCAAAGGGGT +
Preference number: 5 (lower is better)
Translates to: CQGSLVISTGYSFLD*FRKDRSILCGWQRG
Trigger: ACCCCTTTGCCATCCACACAGAATGGACCTGTCTTTGCGAAAGCAATCCAGAAAAGAGTACCCTGTGCTTATGACAAGACTGCCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp GGCAGAGCTCAGTGGTGTCCACAGAAAGCATTAGTCTTAGGTACTATGAGAGAAGTGCTTTTGCCCAGCTaGTTCCCAATAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: GRAQWCPQKALVLGTMREVLLPS*FPIATA
Trigger: TGCTGTGGCTATTGGGAACAAGCTGGGCAAAAGCAC...TTCTCTCATAGTACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411769.1
CDS-3UTR CAA 90 bp CCTCTGGGTCAGATGTGCACTGCTCTATGGAGCACAACAGTCTTCCCAGACCAGGCATTATTTTGTGTGTaGTCTGCTACATGGCAAAAC +
Preference number: 5 (lower is better)
Translates to: PLGQMCTALWSTTVFPDQALFCV*SATWQN
Trigger: GTTTTGCCATGTAGCAGACAACACACAAAATAATGC...CTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS CCA 90 bp GAGGTTGAGCGTATGCATGAGCAGGTTCTGGGATCCCATAACTGTTaGAATTCCTATTTCCATGCTTTCCGTGTGGTGAGGATCTCACAA +
Preference number: 5 (lower is better)
Translates to: EVERMHEQVLGSHNC*NSYFHAFRVVRISQ
Trigger: TTGTGAGATCCTCACCACACGGAAAGCATGGAAATAGGAATTCCAACAGTTATGGGATCCCAGAACCTGCTCATGCATACGCTCAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCGGAGAGCAGACTGAATaGCACAGGGTTCCCAGAATT +
Preference number: 5 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSGEQTE*HRVPRI
Trigger: AATTCTGGGAACCCTGTGCAATTCAGTCTGCTCTCC...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp GCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCAGGAAAGTACTCTTTTCTGGATaGCTTTCGCAAAGACAGGTC +
Preference number: 5 (lower is better)
Translates to: AFPLQRRLGQAEQQSSRKVLFSG*LSQRQV
Trigger: GACCTGTCTTTGCGAAAGCAATCCAGAAAAGAGTAC...TTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp TCCTTCTGCTCCTTTAGAAAACAGAACCAGCACAGCGTCCACACCGACAGCAGTAAGGTTCACTTCCTGTaGTCCAAAGAAAAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: SFCSFRKQNQHSVHTDSSKVHFL*SKEKQD
Trigger: ATCTTGCTTTTCTTTGGACAACAGGAAGTGAACCTT...ACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp GAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGCGCCTCTGCTTCAGGGTaGTTCTTTTCAGATTCCTTT +
Preference number: 5 (lower is better)
Translates to: ENAFPLQRRLGQAEQQSSASASG*FFSDSF
Trigger: AAAGGAATCTGAAAAGAACAACCCTGAAGCAGAGGC...GCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp AGAAAATGCTTTCCCACTTCAAAGGAGACTAGGACAGGCAGAACAACAAAGCAGATGGAAACAAGGGTTTaGATGCTGGGACCAGTAACG +
Preference number: 5 (lower is better)
Translates to: RKCFPTSKETRTGRTTKQMETRV*MLGPVT
Trigger: CGTTACTGGTCCCAGCATCAAAACCCTTGTTTCCAT...CTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS-3UTR CAA 90 bp CACTGGCAAAACAAGGTAAGCAAAGGTTTCCCTAAAGTACCCCCAACTCTGATGTCAACTTCTCTCCACTaGTGTGCTTCCATCAGTATT +
Preference number: 5 (lower is better)
Translates to: HWQNKVSKGFPKVPPTLMSTSLH*CASISI
Trigger: AATACTGATGGAAGCACACAAGTGGAGAGAAGTTGA...CATCAGAGTTGGGGGTACTTTAGGGAAACCTTTGCTTACCTTGTTTTGCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp CACTGGCAAAACAAGGTAAGCAAAGGTTTCCCTAAAGTACCCCCAACTCTGATGGGCATGAGTCATTCCTaGCACTATCATAAAAACCCA +
Preference number: 5 (lower is better)
Translates to: HWQNKVSKGFPKVPPTLMGMSHS*HYHKNP
Trigger: TGGGTTTTTATGATAGTGCAAGGAATGACTCATGCC...CATCAGAGTTGGGGGTACTTTAGGGAAACCTTTGCTTACCTTGTTTTGCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS-3UTR CAA 90 bp CTGCATTATTTTGTGTGTTGTCTGCTACATGGCAAAACAAGGTACTACTGGCAAACATTCCTCCCTCTGTaGGAAACTCCACTCATGGCT +
Preference number: 5 (lower is better)
Translates to: LHYFVCCLLHGKTRYYWQTFLPL*ETPLMA
Trigger: AGCCATGAGTGGAGTTTCCAACAGAGGGAGGAATGT...TTGCCAGTAGTACCTTGTTTTGCCATGTAGCAGACAACACACAAAATAATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS CAA 90 bp CAGGCGGAGCGGTCCGAGGAGTCGAACCTGGCGGAGGACATGGTGTaGGACCGGGGACTCTGCGGCGGTAGGGGCGGCGGCTGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: QAERSEESNLAEDMV*DRGLCGGRGGGCPR
Trigger: GCGAGGACAGCCGCCGCCCCTACCGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGGACCGCTCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS GCA 72 bp GACTCTGCGGCGGTAGGGGCGGCGGCTGTCCTCGCCTaGTCTGCACGCCTTAGCCCGGCAGACGGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: DSAAVGAAAVLA*SARLSPADGFG
Trigger: CCCAAAGCCGTCTGCCGGGCTAAGGCGTGCAGAGCAGGCGAGGACAGCCGCCGCCCCTACCGCCGCAGAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp GGGCCTCTCGCACACCTCGAGGAGCGCTCAGAGGGCTaGGCCAGCACTTTCCTCTCGGCTCCGGGCCCGCAG +
Preference number: 6 (lower is better)
Translates to: GPLAHLEERSEG*ASTFLSAPGPQ
Trigger: CTGCGGGCCCGGAGCCGAGAGGAAAGTGCTGGCCCAGCCCTCTGAGCGCTCCTCGAGGTGTGCGAGAGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CAA 72 bp CGGTCCGAGGAGTCGAACCTGGCGGAGGACATGGTGTaGGACCGGGGACTCTGCGGCGGTAGGGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RSEESNLAEDMV*DRGLCGGRGGG
Trigger: GCCGCCGCCCCTACCGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGGACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS GCA 72 bp AACCTGGCGGAGGACATGGTGTTGGACCGGGGACTCTaGGGCGGTAGGGGCGGCGGCTGTCCTCGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: NLAEDMVLDRGL*GGRGGGCPRLL
Trigger: GAGCAGGCGAGGACAGCCGCCGCCCCTACCGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp GGTCCGAGGAGTCGAACCTGGCGGAGGACATGGTGTTaGACCGGGGACTCTGCGGCGGTAGGGGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: GPRSRTWRRTWC*TGDSAAVGAAA
Trigger: AGCCGCCGCCCCTACCGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp CGGAGCGGTCCGAGGAGTCGAACCTGGCGGAGGACATaGTGTTGGACCGGGGACTCTGCGGCGGTAGGGGCG +
Preference number: 6 (lower is better)
Translates to: RSGPRSRTWRRT*CWTGDSAAVGA
Trigger: CGCCCCTACCGCCGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGGACCGCTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp GAATCGCGGACGAGGAACATACCGTGGCGCTGGCCCTaGAGCCGGGTCTGCGCCTCCTGGCGAGACACCGGC +
Preference number: 6 (lower is better)
Translates to: ESRTRNIPWRWP*SRVCASWRDTG
Trigger: GCCGGTGTCTCGCCAGGAGGCGCAGACCCGGCTCCAGGGCCAGCGCCACGGTATGTTCCTCGTCCGCGATTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CAA 90 bp CGGCTGTCCTCGCCTGCTCTGCACGCCTTAGCCCGGCAGACGGCTTaGGGGCCGAGGAAGGGCCTCTCGCACACCTCGAGGAGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: RLSSPALHALARQTA*GPRKGLSHTSRSAQ
Trigger: CTGAGCGCTCCTCGAGGTGTGCGAGAGGCCCTTCCTCGGCCCCAAAGCCGTCTGCCGGGCTAAGGCGTGCAGAGCAGGCGAGGACAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CAA 72 bp TCGCCTGCTCTGCACGCCTTAGCCCGGCAGACGGCTTaGGGGCCGAGGAAGGGCCTCTCGCACACCTCGAGG +
Preference number: 6 (lower is better)
Translates to: SPALHALARQTA*GPRKGLSHTSR
Trigger: CCTCGAGGTGTGCGAGAGGCCCTTCCTCGGCCCCAAAGCCGTCTGCCGGGCTAAGGCGTGCAGAGCAGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp GTGGAAGAATCGCGGACGAGGAACATACCGTGGCGCTaGCCCTGGAGCCGGGTCTGCGCCTCCTGGCGAGAC +
Preference number: 6 (lower is better)
Translates to: VEESRTRNIPWR*PWSRVCASWRD
Trigger: GTCTCGCCAGGAGGCGCAGACCCGGCTCCAGGGCCAGCGCCACGGTATGTTCCTCGTCCGCGATTCTTCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp CCATATACCAGGCGGAGCGGTCCGAGGAGTCGAACCTaGCGGAGGACATGGTGTTGGACCGGGGACTCTGCG +
Preference number: 6 (lower is better)
Translates to: PYTRRSGPRSRT*RRTWCWTGDSA
Trigger: CGCAGAGTCCCCGGTCCAACACCATGTCCTCCGCCAGGTTCGACTCCTCGGACCGCTCCGCCTGGTATATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CAA 90 bp CACGAGGCACCGAACTCGAAGGAGCGTCGCGCCTCCGGGGTGCTTTaGCCCAGCTTGTTCCCAATAGCCACAGCAACAAAATGGCGGACG +
Preference number: 6 (lower is better)
Translates to: HEAPNSKERRASGVL*PSLFPIATATKWRT
Trigger: CGTCCGCCATTTTGTTGCTGTGGCTATTGGGAACAAGCTGGGCAAAAGCACCCCGGAGGCGCGACGCTCCTTCGAGTTCGGTGCCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp TTGCCCAGCTTGTTCCCAATAGCCACAGCAACAAAATaGCGGACGCGGGAGAAGCGGCAGCCACCTCCCCCT +
Preference number: 6 (lower is better)
Translates to: LPSLFPIATATK*RTREKRQPPPP
Trigger: AGGGGGAGGTGGCTGCCGCTTCTCCCGCGTCCGCCATTTTGTTGCTGTGGCTATTGGGAACAAGCTGGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354336.8
CDS CAA 72 bp CCGAACTCGAAGGAGCGTCGCGCCTCCGGGGTGCTTTaGCCCAGCTTGTTCCCAATAGCCACAGCAACAAAA +
Preference number: 6 (lower is better)
Translates to: PNSKERRASGVL*PSLFPIATATK
Trigger: TTTTGTTGCTGTGGCTATTGGGAACAAGCTGGGCAAAAGCACCCCGGAGGCGCGACGCTCCTTCGAGTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS TCA 72 bp CCATTGGTGGGCTTGGATACCTGGGCGCAGGCTCGATaGGGGTGGTGGTGTCCAGGTAGTGGATCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: PLVGLDTWAQAR*GWWCPGSGSCK
Trigger: TTTACAAGATCCACTACCTGGACACCACCACCCTCATCGAGCCTGCGCCCAGGTATCCAAGCCCACCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp CCCCAGGAGAACCGGAAACTGCAGGTAGAGGAGTTGTaGTCTGAGGTTGAGCGTATGCATGAGCAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: PQENRKLQVEEL*SEVERMHEQVL
Trigger: CAGAACCTGCTCATGCATACGCTCAACCTCAGACCACAACTCCTCTACCTGCAGTTTCCGGTTCTCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS TCA 72 bp TTCCAGGTTATCTTCTGCTGTAGGCAGGTTGGGTGCTaGGACAGATCCCATTGGTGGGCTTGGATACCTGGG +
Preference number: 6 (lower is better)
Translates to: FQVIFCCRQVGC*DRSHWWAWIPG
Trigger: CCCAGGTATCCAAGCCCACCAATGGGATCTGTCTCAGCACCCAACCTGCCTACAGCAGAAGATAACCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS TCA 72 bp CAAAGACAGGTCCATTCTGTGTGGATGGCAAAGGGGTaGTTGCTGCCCCAGGAGAACCGGAAACTGCAGGTA +
Preference number: 6 (lower is better)
Translates to: QRQVHSVWMAKG*LLPQENRKLQV
Trigger: TACCTGCAGTTTCCGGTTCTCCTGGGGCAGCAATCACCCCTTTGCCATCCACACAGAATGGACCTGTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp GATTGCTTTCGCAAAGACAGGTCCATTCTGTGTGGATaGCAAAGGGGTGATTGCTGCCCCAGGAGAACCGGA +
Preference number: 6 (lower is better)
Translates to: DCFRKDRSILCG*QRGDCCPRRTG
Trigger: TCCGGTTCTCCTGGGGCAGCAATCACCCCTTTGCCATCCACACAGAATGGACCTGTCTTTGCGAAAGCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CAA 90 bp ATGCCAAGGCAGTCTTGTCATAAGCACAGGGTACTCTTTTCTGGATaGCTTTCGCAAAGACAGGTCCATTCTGTGTGGATGGCAAAGGGG +
Preference number: 6 (lower is better)
Translates to: MPRQSCHKHRVLFSG*LSQRQVHSVWMAKG
Trigger: CCCCTTTGCCATCCACACAGAATGGACCTGTCTTTGCGAAAGCAATCCAGAAAAGAGTACCCTGTGCTTATGACAAGACTGCCTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp AAAAGCCCTTTGCGCCCGTTCACTTCGCCTTCCCACTaGCCATTTATATTCATCCTTGTGACTTTCACGATG +
Preference number: 6 (lower is better)
Translates to: KSPLRPFTSPSH*PFIFILVTFTM
Trigger: CATCGTGAAAGTCACAAGGATGAATATAAATGGCCAGTGGGAAGGCGAAGTGAACGGGCGCAAAGGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CCA 72 bp TGTGGTCTGAGGTTGAGCGTATGCATGAGCAGGTTCTaGGATCCCATAACTGTTGGAATTCCTATTTCCATG +
Preference number: 6 (lower is better)
Translates to: CGLRLSVCMSRF*DPITVGIPISM
Trigger: CATGGAAATAGGAATTCCAACAGTTATGGGATCCCAGAACCTGCTCATGCATACGCTCAACCTCAGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS TCA 72 bp ACTGTTGGAATTCCTATTTCCATGCTTTCCGTGTGGTaGGGATCTCACAAGCTTTTCGACATAAGGGACAGG +
Preference number: 6 (lower is better)
Translates to: TVGIPISMLSVW*GSHKLFDIRDR
Trigger: CCTGTCCCTTATGTCGAAAAGCTTGTGAGATCCTCACCACACGGAAAGCATGGAAATAGGAATTCCAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS GCA 72 bp AGTCTTGTCATAAGCACAGGGTACTCTTTTCTGGATTaGTTTCGCAAAGACAGGTCCATTCTGTGTGGATGG +
Preference number: 6 (lower is better)
Translates to: SLVISTGYSFLD*FRKDRSILCGW
Trigger: CCATCCACACAGAATGGACCTGTCTTTGCGAAAGCAATCCAGAAAAGAGTACCCTGTGCTTATGACAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1
CDS CAA 72 bp CAGTCTTGTCATAAGCACAGGGTACTCTTTTCTGGATaGCTTTCGCAAAGACAGGTCCATTCTGTGTGGATG +
Preference number: 6 (lower is better)
Translates to: QSCHKHRVLFSG*LSQRQVHSVWM
Trigger: CATCCACACAGAATGGACCTGTCTTTGCGAAAGCAATCCAGAAAAGAGTACCCTGTGCTTATGACAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354336.8
ENST00000411769.1