RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRK (Homo sapiens)

Ensembl gene IDs: ENSG00000167193

Ensembl transcript IDs: ENST00000300574.3, ENST00000398970.5, ENST00000572145.1, ENST00000574295.1

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTAGCGTCAACGCGTTAGTCTGCTTGCGGCCATGTACGGAATCCTaGGCCAGCTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTC +
Preference number: 1 (lower is better)
Translates to: ISVNALVCLRPCTES*ASWLPCATSPVSQV
Trigger: GACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAGCTGGCCCAGGATTCCGTACATGGCCGCAAGCAGACTAACGCGTTGACGCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR GCA 90 bp CTGCTTGCGGCCATGTACGGAATCCTGGGCCAGCTGGCTTCCCTGTaGCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAA +
Preference number: 1 (lower is better)
Translates to: LLAAMYGILGQLASL*HVTGFSGLLIHSDK
Trigger: TTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAGCTGGCCCAGGATTCCGTACATGGCCGCAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR GCA 90 bp ACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTaGACACTGACTGTGTGTCAGACAGTGTGCCGGTCACTCGGACAC +
Preference number: 1 (lower is better)
Translates to: TSPVSQVSSFTQTNT*TLTVCQTVCRSLGH
Trigger: GTGTCCGAGTGACCGGCACACTGTCTGACACACAGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR GCA 90 bp GAGAAATGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTaGTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGA +
Preference number: 1 (lower is better)
Translates to: EKWPCWIPLVRTLVS*CRRVTYYDPFGEGR
Trigger: TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
3UTR GCA 90 bp GAAGACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTaGCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGC +
Preference number: 1 (lower is better)
Translates to: EDTYKTSFDFLRGIN*HTQQSNPAQWFMNG
Trigger: GCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR GCA 90 bp ACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATaGTGTCGTCTAAATAGCCTAGGTCATTTTTGGTCTCATAGGTCT +
Preference number: 1 (lower is better)
Translates to: TGKCLYRLRTNVEVS*CRLNSLGHFWSHRS
Trigger: AGACCTATGAGACCAAAAATGACCTAGGCTATTTAGACGACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR GCA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGACAGCTGGCTTCCCTGTaGCACGTCACCGGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGQLASL*HVTGFS
Trigger: TGAGAAACCGGTGACGTGGCACAGGGAAGCCAGCTG...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CCA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTACCATGTACGGAATCCTaGGCCAGCTGGCTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: PAQWFMNGPGSLITEESLPCTES*ASWLPC
Trigger: ACAGGGAAGCCAGCTGGCCCAGGATTCCGTACATGG...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACTCATCGGGATTCTGTTaGTCCAGCAGACGGACATGT +
Preference number: 2 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDSSGFC*SSRRTC
Trigger: ACATGTCCGTCTGCTGGATCAACAGAATCCCGATGA...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398970.5
3UTR-3UTR CCA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGACTACTACGACCCTTTTaGGGAAGGCAGAGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGLLRPF*GRQRAG
Trigger: CCCAGCTCTCTGCCTTCCCCAAAAGGGTCGTAGTAG...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACCTCCTAATAGGATACTaGCCCTCTGGAGAAATGGCC +
Preference number: 2 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDLLIGY*PSGEMA
Trigger: GGCCATTTCTCCAGAGGGCCAGTATCCTATTAGGAG...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGAGCTGCTGTAGAAGGGTaGCCTACTACGACCCTTTTG +
Preference number: 2 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGAAVEG*PTTTLL
Trigger: CAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGC...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR GCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTGCTGGAACGCAGTGGTaGGATCTCGGCTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTAGTQW*DLGSLQ
Trigger: CTGCAGTGAGCCGAGATCGCACCACTGCGTTCCAGC...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR GCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTTTTGAGACTGAGTCTTaGCCTGTCGCTCAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: PHSTVKSSPVVHERPWITFETES*PVAQAG
Trigger: TCCAGCCTGAGCGACAGGGCAAGACTCAGTCTCAAA...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CCA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCATTACTTCACGGGGGTaGAACGGAACAGTCTGTCGC +
Preference number: 2 (lower is better)
Translates to: NPAQWFMNGPGSLITEESITSRG*NGTVCR
Trigger: GCGACAGACTGTTCCGTTCCACCCCCGTGAAGTAAT...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTATTACTTCACGGGGGTaGAACGGAACAGTCTGTCGC +
Preference number: 2 (lower is better)
Translates to: PHSTVKSSPVVHERPWITITSRG*NGTVCR
Trigger: GCGACAGACTGTTCCGTTCCACCCCCGTGAAGTAAT...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR CAA 90 bp CCTATCCCTTCTGATACACACAGGCACGACCACTACCGCCTCCAATaGCCAATTCAGAAGCTAACACACAAGCCCTCCAGTTCGTACCCT +
Preference number: 2 (lower is better)
Translates to: PIPSDTHRHDHYRLQ*PIQKLTHKPSSSYP
Trigger: AGGGTACGAACTGGAGGGCTTGTGTGTTAGCTTCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp TCCCTTCTGATACACACAGGCACGACCACTACCGCCTCCAATTGCCAATTCAGACGGTTTTCCACAGGGTaGTTTGCACTGCCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: SLLIHTGTTTTASNCQFRRFSTG*FALPER
Trigger: TCTCTCAGGCAGTGCAAATCACCCTGTGGAAAACCG...TCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR GCA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGCAGGGTGATTTGCACTaGCTGAGAGAAAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVQGDLH*LRERRQ
Trigger: TTGCCTCCTTTCTCTCAGGCAGTGCAAATCACCCTG...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR GCA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCAGGACTCTAGTTAGCTaGTGTAGAAGGGTGACCTAC +
Preference number: 2 (lower is better)
Translates to: NPAQWFMNGPGSLITEESRTLVS*CRRVTY
Trigger: GTAGGTCACCCTTCTACAGCAGCTAACTAGAGTCCT...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CCA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCGAGAAATGGCCCTGCTaGATCCCATTAGTTAGGACT +
Preference number: 2 (lower is better)
Translates to: NPAQWFMNGPGSLITEESEKWPC*IPLVRT
Trigger: AGTCCTAACTAATGGGATCCAGCAGGGCCATTTCTC...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGAAAGCAATCCTGCTTaGTACTATTCACACGGTGCA +
Preference number: 2 (lower is better)
Translates to: PHSTVKSSPVVHERPWITESNPA*YYSHGA
Trigger: TGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTC...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp TCCCTTCTGATACACACAGGCACGACCACTACCGCCTCCAATTGCCAATTCAGATGTGTGAATGGGAAGTaGCCTCGTTTGCCATTACAC +
Preference number: 2 (lower is better)
Translates to: SLLIHTGTTTTASNCQFRCVNGK*PRLPLH
Trigger: GTGTAATGGCAAACGAGGTCACTTCCCATTCACACA...TCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398970.5
3UTR-3UTR GCA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCATACTATTCACACGGTaGATGATTACTTCACGGGGG +
Preference number: 2 (lower is better)
Translates to: NPAQWFMNGPGSLITEESILFTR*MITSRG
Trigger: CCCCCGTGAAGTAATCATGCACCGTGTGAATAGTAT...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR GCA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTAGTGCTCGGTACATCCTaGTTTTCACCTGGAATGAAA +
Preference number: 2 (lower is better)
Translates to: PAQWFMNGPGSLITEESLVLGTS*FSPGMK
Trigger: TTTCATTCCAGGTGAAAAGCAGGATGTACCGAGCAC...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTACCTACTTACAGGTTTaGGGGACAAGAATGTCAAGG +
Preference number: 2 (lower is better)
Translates to: PHSTVKSSPVVHERPWITTYLQV*GTRMSR
Trigger: CCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGT...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGAATTTTGTGGAGCACCTaGCCCCATATAAATCATTCC +
Preference number: 2 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGILWST*PHINHS
Trigger: GGAATGATTTATATGGGGTCAGGTGCTCCACAAAAT...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAGCCTAGGTCATTTTTaGTCTCATAGGTCTATTTTG +
Preference number: 2 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDSLGHF*SHRSIL
Trigger: CAAAATAGACCTATGAGACCAAAAATGACCTAGGCT...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTATCATGCTCCATACAATaGAAGCAATCCTGCTTGATA +
Preference number: 2 (lower is better)
Translates to: PAQWFMNGPGSLITEESLSCSIQ*KQSCLI
Trigger: TATCAAGCAGGATTGCTTTCATTGTATGGAGCATGA...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTTCTGAAATGTCAGAATaGGTCACACGCTGGTCATGC +
Preference number: 2 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTSEMSE*VTRWSC
Trigger: GCATGACCAGCGTGTGACTCATTCTGACATTTCAGA...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTGCTGCTGTAGAAGGGTaGCCTACTACGACCCTTTTG +
Preference number: 2 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCAAVEG*PTTTLL
Trigger: CAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGC...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTGCAGAGGGCAGAATTTaGCCCCAAAACCTTCCACAG +
Preference number: 2 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCAEGRI*PQNLPQ
Trigger: CTGTGGAAGGTTTTGGGGTCAAATTCTGCCCTCTGC...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR GCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTAACGTGGAAGTTTCATaGTGTCGTCTAAATAGCCTA +
Preference number: 2 (lower is better)
Translates to: PHSTVKSSPVVHERPWITNVEVS*CRLNSL
Trigger: TAGGCTATTTAGACGACAGCATGAAACTTCCACGTT...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp GGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCGTCTACGGTTTTCCACAGGGTaGTTTGCACTGCCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: GKCLYRLRTNVEVSCCRLRFSTG*FALPER
Trigger: TCTCTCAGGCAGTGCAAATCACCCTGTGGAAAACCG...TAGACGACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTTATTCACACGGTGCATaGTTACTTCACGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCYSHGA*LLHGGG
Trigger: TCCACCCCCGTGAAGTAATCATGCACCGTGTGAATA...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR GCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGCAGGGTGATTTGCACTaGCTGAGAGAAAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGQGDLH*LRERRQ
Trigger: TTGCCTCCTTTCTCTCAGGCAGTGCAAATCACCCTG...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAAGATACCTATCCCTTCTaGTACACACAGGCACGACCA +
Preference number: 2 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKDTYPF*YTQARP
Trigger: TGGTCGTGCCTGTGTGTATCAGAAGGGATAGGTATC...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAAGATACCTATCCCTTCTaGTACACACAGGCACGACCA +
Preference number: 2 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQDTYPF*YTQARP
Trigger: TGGTCGTGCCTGTGTGTATCAGAAGGGATAGGTATC...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR GCA 90 bp GGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCGTCTAGTGCTCGGTACATCCTaGTTTTCACCTGGAATGAAA +
Preference number: 2 (lower is better)
Translates to: GKCLYRLRTNVEVSCCRLVLGTS*FSPGMK
Trigger: TTTCATTCCAGGTGAAAAGCAGGATGTACCGAGCAC...TAGACGACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTTCATGCTCCATACAATaGAAGCAATCCTGCTTGATA +
Preference number: 2 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCSCSIQ*KQSCLI
Trigger: TATCAAGCAGGATTGCTTTCATTGTATGGAGCATGA...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCTTAAAGCTATGCACTaGATAAAGTGCTCGGTACAT +
Preference number: 2 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCLKAMH*IKCSVH
Trigger: ATGTACCGAGCACTTTATTCAGTGCATAGCTTTAAG...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR TCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAAAAAAGTATGAAGCATTaGCTAGGAGGGAACAAATGC +
Preference number: 2 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQKSMKH*LGGNKC
Trigger: GCATTTGTTCCCTCCTAGTCAATGCTTCATACTTTT...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAAATCCTGCTTTTCACCTaGAATGAAAATACACACTTA +
Preference number: 2 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQILLFT*NENTHL
Trigger: TAAGTGTGTATTTTCATTCCAGGTGAAAAGCAGGAT...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR CCA 72 bp AACGCGTTAGTCTGCTTGCGGCCATGTACGGAATCCTaGGCCAGCTGGCTTCCCTGTGCCACGTCACCGGTT +
Preference number: 3 (lower is better)
Translates to: NALVCLRPCTES*ASWLPCATSPV
Trigger: AACCGGTGACGTGGCACAGGGAAGCCAGCTGGCCCAGGATTCCGTACATGGCCGCAAGCAGACTAACGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR GCA 72 bp GCCATGTACGGAATCCTGGGCCAGCTGGCTTCCCTGTaGCACGTCACCGGTTTCTCAGGTCTCCTCATTCAC +
Preference number: 3 (lower is better)
Translates to: AMYGILGQLASL*HVTGFSGLLIH
Trigger: GTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAGCTGGCCCAGGATTCCGTACATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CAA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAACGCGTTAGTCTGCTaGCGGCCATGTACGGAATCC +
Preference number: 3 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDNALVC*RPCTES
Trigger: GGATTCCGTACATGGCCGCAAGCAGACTAACGCGTT...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CAA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTCCTACTACGACCCTTTaGGGGAAGGCAGAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: PHSTVKSSPVVHERPWITPTTTL*GKAESW
Trigger: CCAGCTCTCTGCCTTCCCCAAAAGGGTCGTAGTAGG...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CAA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCCCTCCACCTCCCAGGTaGAAGCAATTCTCCTGCCTC +
Preference number: 3 (lower is better)
Translates to: NPAQWFMNGPGSLITEESPPPPR*KQFSCL
Trigger: GAGGCAGGAGAATTGCTTCAACCTGGGAGGTGGAGG...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR TCA 72 bp AGGTCTCCTCATTCACTCAGACAAATACGTGCACACTaGCTGTGTGTCAGACAGTGTGCCGGTCACTCGGAC +
Preference number: 3 (lower is better)
Translates to: RSPHSLRQIRAH*LCVRQCAGHSD
Trigger: GTCCGAGTGACCGGCACACTGTCTGACACACAGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CAA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTTCCACAGGGTGATTaGCACTGCCTGAGAGAAAGG +
Preference number: 3 (lower is better)
Translates to: NPAQWFMNGPGSLITEESFPQGD*HCLRER
Trigger: CCTTTCTCTCAGGCAGTGCAAATCACCCTGTGGAAA...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CAA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTGCAGAGGGCAGAATTaGACCCCAAAACCTTCCACA +
Preference number: 3 (lower is better)
Translates to: NPAQWFMNGPGSLITEESCRGQN*TPKPST
Trigger: TGTGGAAGGTTTTGGGGTCAAATTCTGCCCTCTGCA...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR TCA 72 bp TGCCTGAGAGAAAGGAGGCAAGATACCTATCCCTTCTaGTACACACAGGCACGACCACTACCGCCTCCAATT +
Preference number: 3 (lower is better)
Translates to: CLRERRQDTYPF*YTQARPLPPPI
Trigger: AATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGATAGGTATCTTGCCTCCTTTCTCTCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR GCA 72 bp CCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTaGTGTAGAAGGGTGACCTACTACGACCCTTTTGGG +
Preference number: 3 (lower is better)
Translates to: PCWIPLVRTLVS*CRRVTYYDPFG
Trigger: CCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
3UTR-3UTR CAA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGCACCTACTTACAGGTTaGGGGGACAAGAATGTCAAG +
Preference number: 3 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVHLLTG*GDKNVK
Trigger: CTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTG...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
3UTR GCA 72 bp GTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTaGACACTGACTGTGTGTCAGACAGTGTGCCGGTCA +
Preference number: 3 (lower is better)
Translates to: VSQVSSFTQTNT*TLTVCQTVCRS
Trigger: TGACCGGCACACTGTCTGACACACAGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CAA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCCTCATCGGGATTCTGTaGATCCAGCAGACGGACATG +
Preference number: 3 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSLIGIL*IQQTDM
Trigger: CATGTCCGTCTGCTGGATCAACAGAATCCCGATGAG...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398970.5
3UTR-3UTR CAA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTCACTACCGCCTCCAATaGCCAATTCAGAAGCTAACA +
Preference number: 3 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTHYRLQ*PIQKLT
Trigger: TGTTAGCTTCTGAATTGGCAATTGGAGGCGGTAGTG...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CAA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTAAAAAAGTATGAAGCATaGACTAGGAGGGAACAAATG +
Preference number: 3 (lower is better)
Translates to: PAQWFMNGPGSLITEESLKKYEA*TRREQM
Trigger: CATTTGTTCCCTCCTAGTCAATGCTTCATACTTTTT...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CAA 90 bp GGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCGTCTACACTACCGCCTCCAATaGCCAATTCAGAAGCTAACA +
Preference number: 3 (lower is better)
Translates to: GKCLYRLRTNVEVSCCRLHYRLQ*PIQKLT
Trigger: TGTTAGCTTCTGAATTGGCAATTGGAGGCGGTAGTG...TAGACGACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR GCA 72 bp TATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTaGCACACTCAACAGTCAAATCCAGCCCAGTGGTTC +
Preference number: 3 (lower is better)
Translates to: YKTSFDFLRGIN*HTQQSNPAQWF
Trigger: GAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR GCA 72 bp GTTTCTATTGGTCATACCACACCAGAGACCGGTAAGTaGCTTTATAGACTGAGAACTAACGTGGAAGTTTCA +
Preference number: 3 (lower is better)
Translates to: VSIGHTTPETGK*LYRLRTNVEVS
Trigger: TGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTCTGGTGTGGTATGACCAATAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR-3UTR CAA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGCTGTCAGCAAAACTGTaGAACTATACTCAGCTGAAG +
Preference number: 3 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGLSAKL*NYTQLK
Trigger: CTTCAGCTGAGTATAGTTCAACAGTTTTGCTGACAG...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398970.5
3UTR TCA 72 bp TTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTaGCCCCAAAACCTTCCACAGAATATCAGAGGTGAT +
Preference number: 3 (lower is better)
Translates to: FIQVAQNAEGRI*PQNLPQNIRGD
Trigger: ATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
3UTR GCA 72 bp TGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATaGTGTCGTCTAAATAGCCTAGGTCATTTTTGGTCT +
Preference number: 3 (lower is better)
Translates to: CLYRLRTNVEVS*CRLNSLGHFWS
Trigger: AGACCAAAAATGACCTAGGCTATTTAGACGACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR CCA 72 bp GTCAGACAGTGTGCCGGTCACTCGGACACCACAATCTaGTATAGGTTCAAAGAATGTAAATTTATCATTTTA +
Preference number: 3 (lower is better)
Translates to: VRQCAGHSDTTI*YRFKECKFIIL
Trigger: TAAAATGATAAATTTACATTCTTTGAACCTATACCAGATTGTGGTGTCCGAGTGACCGGCACACTGTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACCCTCCGAGTCGAAGTTaGCCGCCATGGCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDPPSRS*PPWLPP
Trigger: CGGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGG...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTAAACACCCCGTGCCGCTaGCCCTGCAGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: PAQWFMNGPGSLITEESLNTPCR*PCSSAT
Trigger: GGTGGCGCTGCTGCAGGGCCAGCGGCACGGGGTGTT...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACCATAGTCCCCGGGGCTaGTGCTCGAGTCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDHSPRG*CSSPAP
Trigger: TGGTGCGGGACTCGAGCACCAGCCCCGGGGACTATG...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGAAGCGCCACCGCCTCCTaGCGACTCAACCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGSATAS*RLNLPQ
Trigger: CTGGGGGAGGTTGAGTCGGCAGGAGGCGGTGGCGCT...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACGCTGGAACGCAGTGGTaGGATCTCGGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDAGTQW*DLGSLQ
Trigger: CTGCAGTGAGCCGAGATCGCACCACTGCGTTCCAGC...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGACCTCCGAGTCGAAGTTaGCCGCCATGGCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRPPSRS*PPWLPP
Trigger: CGGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGG...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACCAGCTGGCTTCCCTGTaGCACGTCACCGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDQLASL*HVTGFS
Trigger: TGAGAAACCGGTGACGTGGCACAGGGAAGCCAGCTG...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTAAGTTCTCTGAGACGCTaGGCACATAGTCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PAQWFMNGPGSLITEESLSSLRR*AHSPRG
Trigger: GCCCCGGGGACTATGTGCTCAGCGTCTCAGAGAACT...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTAGTCCCCGGGGCTGGTaGTCGAGTCCCGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTSPRGW*SSPAPG
Trigger: TCCTGGTGCGGGACTCGAGCACCAGCCCCGGGGACT...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGACCCACCCAGTGGCTGTaGGTGGGAACCCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRPTQWL*VGTLLV
Trigger: AACCAGGAGGGTTCCCACCCACAGCCACTGGGTGGG...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS-3UTR CCA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTACCCTGTCGCTCAGGCTaGAACGCAGTGGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: PAQWFMNGPGSLITEESLPCRSG*NAVVRS
Trigger: AGATCGCACCACTGCGTTCCAGCCTGAGCGACAGGG...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACCGGTTTTCCACAGGGTaGTTTGCACTGCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDRFSTG*FALPER
Trigger: TCTCTCAGGCAGTGCAAATCACCCTGTGGAAAACCG...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACGCTGCTGTAGAAGGGTaGCCTACTACGACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDAAVEG*PTTTLL
Trigger: CAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGC...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACGCAGAGGGCAGAATTTaGCCCCAAAACCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDAEGRI*PQNLPQ
Trigger: CTGTGGAAGGTTTTGGGGTCAAATTCTGCCCTCTGC...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACGGAATCCTTAGGACTTaGGTAGCGCTGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDGILRT*VALPVP
Trigger: TGGAACAGGCAGCGCTACTCAAGTCCTAAGGATTCC...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCAGTCCCCGGGGCTGGTaGTCGAGTCCCGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSSPRGW*SSPAPG
Trigger: TCCTGGTGCGGGACTCGAGCACCAGCCCCGGGGACT...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACTTTGAGACTGAGTCTTaGCCTGTCGCTCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDFETES*PVAQAG
Trigger: TCCAGCCTGAGCGACAGGGCAAGACTCAGTCTCAAA...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGAGACGCGCGAGTTCTCTaGGACGCTGAGCACATAGTC +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRDARVL*DAEHIV
Trigger: GACTATGTGCTCAGCGTCTCAGAGAACTCGCGCGTC...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGAGCGCCACCGCCTCCTaGCGACTCAACCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMSATAS*RLNLPQ
Trigger: CTGGGGGAGGTTGAGTCGGCAGGAGGCGGTGGCGCT...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCCTCCTATTCGGAGTCTaGAGGGGCTCACCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSLLFGV*RGSPRA
Trigger: CGCCCGGGGTGAGCCCCTCCAGACTCCGAATAGGAG...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCCTACTACGACCCTTTTaGGGAAGGCAGAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NPAQWFMNGPGSLITEESLLRPF*GRQRAG
Trigger: CCCAGCTCTCTGCCTTCCCCAAAAGGGTCGTAGTAG...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTAAGGATACTGGCCCTCTaGAGAAATGGCCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PAQWFMNGPGSLITEESLRILAL*RNGPAG
Trigger: TCCAGCAGGGCCATTTCTCCAGAGGGCCAGTATCCT...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTAATCAGAGCCGATACTaGGGCGGAGGCAGGTCTATA +
Preference number: 4 (lower is better)
Translates to: PHSTVKSSPVVHERPWITNQSRY*GGGRSI
Trigger: TATAGACCTGCCTCCGCCTCAGTATCGGCTCTGATT...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTCGGTTTTCCACAGGGTaGTTTGCACTGCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PHSTVKSSPVVHERPWITRFSTG*FALPER
Trigger: TCTCTCAGGCAGTGCAAATCACCCTGTGGAAAACCG...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACTCTGAAATGTCAGAATaGGTCACACGCTGGTCATGC +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDSEMSE*VTRWSC
Trigger: GCATGACCAGCGTGTGACTCATTCTGACATTTCAGA...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGCTGCTGTAGAAGGGTaGCCTACTACGACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: PHSTVKSSPVVHERPWITAAVEG*PTTTLL
Trigger: CAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGC...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCCTCCGAGTCGAAGTTaGCCGCCATGGCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCPPSRS*PPWLPP
Trigger: CGGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGG...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGAGTCCCCGGGGCTGGTaGTCGAGTCCCGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGSPRGW*SSPAPG
Trigger: TCCTGGTGCGGGACTCGAGCACCAGCCCCGGGGACT...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGAGAATCATCCCTCTCTTaGCTTCGCTGTCCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGESSLS*LRCPPH
Trigger: ATGCGGAGGACAGCGAAGGCAAGAGAGGGATGATTC...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAAAACACCCCGTGCCGCTaGCCCTGCAGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQNTPCR*PCSSAT
Trigger: GGTGGCGCTGCTGCAGGGCCAGCGGCACGGGGTGTT...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCTCCTATTCGGAGTCTaGAGGGGCTCACCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCLLFGV*RGSPRA
Trigger: CGCCCGGGGTGAGCCCCTCCAGACTCCGAATAGGAG...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCAGTTCTCTGAGACGCTaGGCACATAGTCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSSSLRR*AHSPRG
Trigger: GCCCCGGGGACTATGTGCTCAGCGTCTCAGAGAACT...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp CTCATCGGGATTCTGTTGATCCAGCAGACGGACATGTGTGAATGGGAAGTGACCAATCAGAGCCGATACTaGGGCGGAGGCAGGTCTATA +
Preference number: 4 (lower is better)
Translates to: LIGILLIQQTDMCEWEVTNQSRY*GGGRSI
Trigger: TATAGACCTGCCTCCGCCTCAGTATCGGCTCTGATT...GGTCACTTCCCATTCACACATGTCCGTCTGCTGGATCAACAGAATCCCGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398970.5
CDS-3UTR GCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTCAGGGTGATTTGCACTaGCTGAGAGAAAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: PHSTVKSSPVVHERPWITQGDLH*LRERRQ
Trigger: TTGCCTCCTTTCTCTCAGGCAGTGCAAATCACCCTG...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCCTGGAGAAATGGCCCTaGTGGATCCCATTAGTTAGG +
Preference number: 4 (lower is better)
Translates to: NPAQWFMNGPGSLITEESLEKWP*WIPLVR
Trigger: CCTAACTAATGGGATCCAGCAGGGCCATTTCTCCAG...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGCGAAGTTGCCCGCCATaGCTGCCTCCGCGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMRSCPP*LPPRLN
Trigger: GTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCG...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGCATAGTCCCCGGGGCTaGTGCTCGAGTCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGHSPRG*CSSPAP
Trigger: TGGTGCGGGACTCGAGCACCAGCCCCGGGGACTATG...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCCTCCACTACCCTGCCTaGATCTGGAAACTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: NPAQWFMNGPGSLITEESLHYPA*IWKLVL
Trigger: TAGAACCAGTTTCCAGATCCAGGCAGGGTAGTGGAG...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp ATGCTCCATACAATGAAAGCAATCCTGCTTGATACTATTCACACGGTGCATGATCTCCGGCCCACCCAGTaGCTGTGGGTGGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: MLHTMKAILLDTIHTVHDLRPTQ*LWVGTL
Trigger: GAGGGTTCCCACCCACAGCCACTGGGTGGGCCGGAG...ATCATGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTCATTGTATGGAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS-3UTR CCA 90 bp TCCCTTCTGATACACACAGGCACGACCACTACCGCCTCCAATTGCCAATTCAGATATATGGGCCCATTCTaGAGGTTAGGGAGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLLIHTGTTTTASNCQFRYMGPF*RLGSGV
Trigger: CACTCCGCTCCCTAACCTCCAGAATGGGCCCATATA...TCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS-3UTR CCA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGATTACTTCACGGGGGTaGAACGGAACAGTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVITSRG*NGTVCR
Trigger: GCGACAGACTGTTCCGTTCCACCCCCGTGAAGTAAT...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTAGTTCTCTGAGACGCTaGGCACATAGTCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCSSLRR*AHSPRG
Trigger: GCCCCGGGGACTATGTGCTCAGCGTCTCAGAGAACT...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCGACGCGCGAGTTCTCTaGGACGCTGAGCACATAGTC +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSDARVL*DAEHIV
Trigger: GACTATGTGCTCAGCGTCTCAGAGAACTCGCGCGTC...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGCCGCCTCCTCCTGCCTaGGAATCACTCCACTACCCT +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMPPPPA*ESLHYP
Trigger: AGGGTAGTGGAGTGATTCTCAGGCAGGAGGAGGCGG...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATGTGTGAATGGGAAGTaGCCTCGTTTGCCATTACAC +
Preference number: 4 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGCVNGK*PRLPLH
Trigger: GTGTAATGGCAAACGAGGTCACTTCCCATTCACACA...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGTCATCGGGATTCTGTTaGTCCAGCAGACGGACATGT +
Preference number: 4 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVSSGFC*SSRRTC
Trigger: ACATGTCCGTCTGCTGGATCAACAGAATCCCGATGA...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGATCATCGGGATTCTGTTaGTCCAGCAGACGGACATGT +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRSSGFC*SSRRTC
Trigger: ACATGTCCGTCTGCTGGATCAACAGAATCCCGATGA...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp TCCCTTCTGATACACACAGGCACGACCACTACCGCCTCCAATTGCCAATTCAGATATTCACACGGTGCATaGTTACTTCACGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLLIHTGTTTTASNCQFRYSHGA*LLHGGG
Trigger: TCCACCCCCGTGAAGTAATCATGCACCGTGTGAATA...TCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGAATCACTCCACTACCCTaGCTGGATCTGGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRITPLP*LDLETG
Trigger: ACCAGTTTCCAGATCCAGGCAGGGTAGTGGAGTGAT...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTAAGGACTCTAGTTAGCTaGTGTAGAAGGGTGACCTAC +
Preference number: 4 (lower is better)
Translates to: PAQWFMNGPGSLITEESLRTLVS*CRRVTY
Trigger: GTAGGTCACCCTTCTACAGCAGCTAACTAGAGTCCT...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGCGAAGTTGCCCGCCATaGCTGCCTCCGCGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGRSCPP*LPPRLN
Trigger: GTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCG...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAACATAGTCCCCGGGGCTaGTGCTCGAGTCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQHSPRG*CSSPAP
Trigger: TGGTGCGGGACTCGAGCACCAGCCCCGGGGACTATG...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAACTCCTATTCGGAGTCTaGAGGGGCTCACCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKLLFGV*RGSPRA
Trigger: CGCCCGGGGTGAGCCCCTCCAGACTCCGAATAGGAG...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGCCCAGTGGCTGTGGGTaGGAACCCTCCTGGTTACCT +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMPSGCG*EPSWLP
Trigger: AGGTAACCAGGAGGGTTCCCACCCACAGCCACTGGG...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS-3UTR CCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGAGAAATGGCCCTGCTaGATCCCATTAGTTAGGACT +
Preference number: 4 (lower is better)
Translates to: PHSTVKSSPVVHERPWITEKWPC*IPLVRT
Trigger: AGTCCTAACTAATGGGATCCAGCAGGGCCATTTCTC...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCCCATGTACGGAATCCTaGGCCAGCTGGCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSPCTES*ASWLPC
Trigger: ACAGGGAAGCCAGCTGGCCCAGGATTCCGTACATGG...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
3UTR CAA 72 bp TCTGATACACACAGGCACGACCACTACCGCCTCCAATaGCCAATTCAGAAGCTAACACACAAGCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SDTHRHDHYRLQ*PIQKLTHKPSS
Trigger: ACTGGAGGGCTTGTGTGTTAGCTTCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAATGAATCAAACTCTTaGTCTCCTATTCGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDNESNS*SPIRSL
Trigger: CAGACTCCGAATAGGAGATCAAGAGTTTGATTCATT...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTGCAGAGGGCAGAATTTaGCCCCAAAACCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTAEGRI*PQNLPQ
Trigger: CTGTGGAAGGTTTTGGGGTCAAATTCTGCCCTCTGC...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTCATCGGGATTCTGTTGATCCAGCAGACGGACATGTGTGAATGGGAAGTGACCCAAATACGTGCACACTaGCTGTGTGTCAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: LIGILLIQQTDMCEWEVTQIRAH*LCVRQC
Trigger: ACACTGTCTGACACACAGTCAGTGTGCACGTATTTG...GGTCACTTCCCATTCACACATGTCCGTCTGCTGGATCAACAGAATCCCGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398970.5
CDS-3UTR GCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTCCAGAGACCGGTAAGTaGCTTTATAGACTGAGAACT +
Preference number: 4 (lower is better)
Translates to: PHSTVKSSPVVHERPWITPETGK*LYRLRT
Trigger: AGTTCTCAGTCTATAAAGGCACTTACCGGTCTCTGG...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGGGGTGGGAACCCTCCTaGTTACCTCCAATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMGWEPS*LPPIRA
Trigger: GGCTCTGATTGGAGGTAACCAGGAGGGTTCCCACCC...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS-3UTR CCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGAGAGAAATGGCCCTGCTaGATCCCATTAGTTAGGACT +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGREKWPC*IPLVRT
Trigger: AGTCCTAACTAATGGGATCCAGCAGGGCCATTTCTC...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp ATGCTCCATACAATGAAAGCAATCCTGCTTGATACTATTCACACGGTGCATGATCCGCCTCCTCCTGCCTaGGAATCACTCCACTACCCT +
Preference number: 4 (lower is better)
Translates to: MLHTMKAILLDTIHTVHDPPPPA*ESLHYP
Trigger: AGGGTAGTGGAGTGATTCTCAGGCAGGAGGAGGCGG...ATCATGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTCATTGTATGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTGATACCTATCCCTTCTaGTACACACAGGCACGACCA +
Preference number: 4 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTDTYPF*YTQARP
Trigger: TGGTCGTGCCTGTGTGTATCAGAAGGGATAGGTATC...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGGAAAGCAATCCTGCTTaGTACTATTCACACGGTGCA +
Preference number: 4 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVESNPA*YYSHGA
Trigger: TGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTC...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCGCTGCTGTAGAAGGGTaGCCTACTACGACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSAAVEG*PTTTLL
Trigger: CAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGC...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGAACAGAATATCAGAGGTaGTTGGTCCTTCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRTEYQR*LVLPLL
Trigger: CAAGAGTGGAAGGACCAATCACCTCTGATATTCTGT...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCTACTCCGCCTCCTCCTaGCTGAGAATCACTCCACTA +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSYSASS*LRITPL
Trigger: TAGTGGAGTGATTCTCAGGCAGGAGGAGGCGGAGTA...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGAATACTATTCACACGGTaGATGATTACTTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRILFTR*MITSRG
Trigger: CCCCCGTGAAGTAATCATGCACCGTGTGAATAGTAT...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGAGTGCTCGGTACATCCTaGTTTTCACCTGGAATGAAA +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRVLGTS*FSPGMK
Trigger: TTTCATTCCAGGTGAAAAGCAGGATGTACCGAGCAC...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCCCTGGATCTGGAAACTaGTTCTATCAACGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: NPAQWFMNGPGSLITEESPGSGN*FYQRCS
Trigger: ACTACAACGTTGATAGAACCAGTTTCCAGATCCAGG...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGAACCTACTTACAGGTTTaGGGGACAAGAATGTCAAGG +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRTYLQV*GTRMSR
Trigger: CCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGT...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGAGGATACTGGCCCTCTaGAGAAATGGCCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMRILAL*RNGPAG
Trigger: TCCAGCAGGGCCATTTCTCCAGAGGGCCAGTATCCT...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
3UTR CAA 72 bp GAACTATACTCAGCTGAAGTCCTCATCGGGATTCTGTaGATCCAGCAGACGGACATGTGTGAATGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ELYSAEVLIGIL*IQQTDMCEWEV
Trigger: CACTTCCCATTCACACATGTCCGTCTGCTGGATCAACAGAATCCCGATGAGGACTTCAGCTGAGTATAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398970.5
CDS-3UTR TCA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTTCATGCTCCATACAATaGAAGCAATCCTGCTTGATA +
Preference number: 4 (lower is better)
Translates to: PHSTVKSSPVVHERPWITSCSIQ*KQSCLI
Trigger: TATCAAGCAGGATTGCTTTCATTGTATGGAGCATGA...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTAAACGTGGAAGTTTCATaGTGTCGTCTAAATAGCCTA +
Preference number: 4 (lower is better)
Translates to: PAQWFMNGPGSLITEESLNVEVS*CRLNSL
Trigger: TAGGCTATTTAGACGACAGCATGAAACTTCCACGTT...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp ATGCTCCATACAATGAAAGCAATCCTGCTTGATACTATTCACACGGTGCATGATCAGCTGGCTTCCCTGTaGCACGTCACCGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: MLHTMKAILLDTIHTVHDQLASL*HVTGFS
Trigger: TGAGAAACCGGTGACGTGGCACAGGGAAGCCAGCTG...ATCATGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTCATTGTATGGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGGTCAACGCGTTAGTCTaGTTGCGGCCATGTACGGAA +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMVNALV*LRPCTE
Trigger: TTCCGTACATGGCCGCAAGCAGACTAACGCGTTGAC...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCCTCCACTACCCTGCCTaGATCTGGAAACTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSLHYPA*IWKLVL
Trigger: TAGAACCAGTTTCCAGATCCAGGCAGGGTAGTGGAG...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTTTGGGGACTCGCTTCTaGATAACCCTGGCATATATG +
Preference number: 4 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTLGTRF*ITLAYM
Trigger: CATATATGCCAGGGTTATCCAGAAGCGAGTCCCCAA...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS-3UTR CCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGCTACTACGACCCTTTTaGGGAAGGCAGAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGLLRPF*GRQRAG
Trigger: CCCAGCTCTCTGCCTTCCCCAAAAGGGTCGTAGTAG...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCCTCCTAATAGGATACTaGCCCTCTGGAGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSLLIGY*PSGEMA
Trigger: GGCCATTTCTCCAGAGGGCCAGTATCCTATTAGGAG...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGTCAAATCCAGCCCAGTaGTTCATGAACGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMSNPAQ*FMNGPG
Trigger: TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGA...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGATCATGCTCCATACAATaGAAGCAATCCTGCTTGATA +
Preference number: 4 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRSCSIQ*KQSCLI
Trigger: TATCAAGCAGGATTGCTTTCATTGTATGGAGCATGA...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCTCTGAAATGTCAGAATaGGTCACACGCTGGTCATGC +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSSEMSE*VTRWSC
Trigger: GCATGACCAGCGTGTGACTCATTCTGACATTTCAGA...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGTACTCCGCCTCCTCCTaGCTGAGAATCACTCCACTA +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGYSASS*LRITPL
Trigger: TAGTGGAGTGATTCTCAGGCAGGAGGAGGCGGAGTA...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCAGGACTCTAGTTAGCTaGTGTAGAAGGGTGACCTAC +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSRTLVS*CRRVTY
Trigger: GTAGGTCACCCTTCTACAGCAGCTAACTAGAGTCCT...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTCCAGAGACCGGTAAGTaGCTTTATAGACTGAGAACT +
Preference number: 4 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTPETGK*LYRLRT
Trigger: AGTTCTCAGTCTATAAAGGCACTTACCGGTCTCTGG...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCGAAGTTGCCCGCCATaGCTGCCTCCGCGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQRSCPP*LPPRLN
Trigger: GTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCTCCACTACCCTGCCTaGATCTGGAAACTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCLHYPA*IWKLVL
Trigger: TAGAACCAGTTTCCAGATCCAGGCAGGGTAGTGGAG...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAAAGGATACTGGCCCTCTaGAGAAATGGCCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKRILAL*RNGPAG
Trigger: TCCAGCAGGGCCATTTCTCCAGAGGGCCAGTATCCT...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp GGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCGTCTATCAAATCCAGCCCAGTaGTTCATGAACGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GKCLYRLRTNVEVSCCRLSNPAQ*FMNGPG
Trigger: TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGA...TAGACGACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGTATTCACACGGTGCATaGTTACTTCACGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGYSHGA*LLHGGG
Trigger: TCCACCCCCGTGAAGTAATCATGCACCGTGTGAATA...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAAGCAGAGGGCAGAATTTaGCCCCAAAACCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKAEGRI*PQNLPQ
Trigger: CTGTGGAAGGTTTTGGGGTCAAATTCTGCCCTCTGC...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCAAATACGTGCACACTaGCTGTGTGTCAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCQIRAH*LCVRQC
Trigger: ACACTGTCTGACACACAGTCAGTGTGCACGTATTTG...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAAGGAATCCTTAGGACTTaGGTAGCGCTGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKGILRT*VALPVP
Trigger: TGGAACAGGCAGCGCTACTCAAGTCCTAAGGATTCC...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCCATCCTTTGATTTCTTaGGGGGCATTAACTGCCACA +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSHPLIS*GALTAT
Trigger: TGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATG...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGATCACTCCACTACCCTaGCTGGATCTGGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGITPLP*LDLETG
Trigger: ACCAGTTTCCAGATCCAGGCAGGGTAGTGGAGTGAT...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAAGAATCATCCCTCTCTTaGCTTCGCTGTCCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKESSLS*LRCPPH
Trigger: ATGCGGAGGACAGCGAAGGCAAGAGAGGGATGATTC...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCATACTATTCACACGGTaGATGATTACTTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSILFTR*MITSRG
Trigger: CCCCCGTGAAGTAATCATGCACCGTGTGAATAGTAT...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCGTGCTCGGTACATCCTaGTTTTCACCTGGAATGAAA +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSVLGTS*FSPGMK
Trigger: TTTCATTCCAGGTGAAAAGCAGGATGTACCGAGCAC...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGAGGACTCTAGTTAGCTaGTGTAGAAGGGTGACCTAC +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMRTLVS*CRRVTY
Trigger: GTAGGTCACCCTTCTACAGCAGCTAACTAGAGTCCT...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGCTGGAGAAATGGCCCTaGTGGATCCCATTAGTTAGG +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGLEKWP*WIPLVR
Trigger: CCTAACTAATGGGATCCAGCAGGGCCATTTCTCCAG...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAATTTGAGACTGAGTCTTaGCCTGTCGCTCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKFETES*PVAQAG
Trigger: TCCAGCCTGAGCGACAGGGCAAGACTCAGTCTCAAA...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCACCTACTTACAGGTTTaGGGGACAAGAATGTCAAGG +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSTYLQV*GTRMSR
Trigger: CCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGT...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTAATGAATCAAACTCTTaGTCTCCTATTCGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTNESNS*SPIRSL
Trigger: CAGACTCCGAATAGGAGATCAAGAGTTTGATTCATT...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp ATGCTCCATACAATGAAAGCAATCCTGCTTGATACTATTCACACGGTGCATGATGATACCTATCCCTTCTaGTACACACAGGCACGACCA +
Preference number: 4 (lower is better)
Translates to: MLHTMKAILLDTIHTVHDDTYPF*YTQARP
Trigger: TGGTCGTGCCTGTGTGTATCAGAAGGGATAGGTATC...ATCATGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTCATTGTATGGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAATATTCACACGGTGCATaGTTACTTCACGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQYSHGA*LLHGGG
Trigger: TCCACCCCCGTGAAGTAATCATGCACCGTGTGAATA...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGGAAAGCAATCCTGCTTaGTACTATTCACACGGTGCA +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMESNPA*YYSHGA
Trigger: TGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTC...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTCTTAAAGCTATGCACTaGATAAAGTGCTCGGTACAT +
Preference number: 4 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTLKAMH*IKCSVH
Trigger: ATGTACCGAGCACTTTATTCAGTGCATAGCTTTAAG...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCATTTTGTGGAGCACCTaGCCCCATATAAATCATTCC +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSILWST*PHINHS
Trigger: GGAATGATTTATATGGGGTCAGGTGCTCCACAAAAT...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAAATCACTCCACTACCCTaGCTGGATCTGGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQITPLP*LDLETG
Trigger: ACCAGTTTCCAGATCCAGGCAGGGTAGTGGAGTGAT...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAACAGGGTGATTTGCACTaGCTGAGAGAAAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKQGDLH*LRERRQ
Trigger: TTGCCTCCTTTCTCTCAGGCAGTGCAAATCACCCTG...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCTTGAGGGGCATTAACTaGCACACTCAACAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSLRGIN*HTQQSN
Trigger: ATTTGACTGTTGAGTGTGGCAGTTAATGCCCCTCAA...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTACCTACTTACAGGTTTaGGGGACAAGAATGTCAAGG +
Preference number: 4 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCTYLQV*GTRMSR
Trigger: CCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGT...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp TCCCTTCTGATACACACAGGCACGACCACTACCGCCTCCAATTGCCAATTCAGAATCCTGCTTTTCACCTaGAATGAAAATACACACTTA +
Preference number: 4 (lower is better)
Translates to: SLLIHTGTTTTASNCQFRILLFT*NENTHL
Trigger: TAAGTGTGTATTTTCATTCCAGGTGAAAAGCAGGAT...TCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGATCCTGCTTTTCACCTaGAATGAAAATACACACTTA +
Preference number: 4 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVILLFT*NENTHL
Trigger: TAAGTGTGTATTTTCATTCCAGGTGAAAAGCAGGAT...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAACTCCTAATAGGATACTaGCCCTCTGGAGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKLLIGY*PSGEMA
Trigger: GGCCATTTCTCCAGAGGGCCAGTATCCTATTAGGAG...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGGATTTAATGTGTGTGTaGACTTTACAGTATCTACGT +
Preference number: 4 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVDLMCV*TLQYLR
Trigger: ACGTAGATACTGTAAAGTCCACACACACATTAAATC...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp ATGCTCCATACAATGAAAGCAATCCTGCTTGATACTATTCACACGGTGCATGATTGTGTGAATGGGAAGTaGCCTCGTTTGCCATTACAC +
Preference number: 4 (lower is better)
Translates to: MLHTMKAILLDTIHTVHDCVNGK*PRLPLH
Trigger: GTGTAATGGCAAACGAGGTCACTTCCCATTCACACA...ATCATGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTCATTGTATGGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCAAAAGTATGAAGCATTaGCTAGGAGGGAACAAATGC +
Preference number: 4 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSKSMKH*LGGNKC
Trigger: GCATTTGTTCCCTCCTAGTCAATGCTTCATACTTTT...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp GGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCGTCTAACAGAATATCAGAGGTaGTTGGTCCTTCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: GKCLYRLRTNVEVSCCRLTEYQR*LVLPLL
Trigger: CAAGAGTGGAAGGACCAATCACCTCTGATATTCTGT...TAGACGACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGACTCCTCCTCCTGCCTaGGAATCACTCCACTACCCT +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQTPPPA*ESLHYP
Trigger: AGGGTAGTGGAGTGATTCTCAGGCAGGAGGAGGAGT...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574295.1
CDS-3UTR GCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGTTGAGGGGCATTAACTaGCACACTCAACAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMLRGIN*HTQQSN
Trigger: ATTTGACTGTTGAGTGTGGCAGTTAATGCCCCTCAA...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCCTGGATCTGGAAACTaGTTCTATCAACGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCPGSGN*FYQRCS
Trigger: ACTACAACGTTGATAGAACCAGTTTCCAGATCCAGG...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp CTTGACTTTTATACAAGTTGCACAGAATGCAGAGGGCAGAATTTGACCCCAAAAGAGAAATGGCCCTGCTaGATCCCATTAGTTAGGACT +
Preference number: 4 (lower is better)
Translates to: LDFYTSCTECRGQNLTPKEKWPC*IPLVRT
Trigger: AGTCCTAACTAATGGGATCCAGCAGGGCCATTTCTC...TTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAAAGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp TCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAATACGTGCACACTGACTAGCCTAGGTCATTTTTaGTCTCATAGGTCTATTTTG +
Preference number: 4 (lower is better)
Translates to: SPVSQVSSFTQTNTCTLTSLGHF*SHRSIL
Trigger: CAAAATAGACCTATGAGACCAAAAATGACCTAGGCT...AGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGATTTTGTGGAGCACCTaGCCCCATATAAATCATTCC +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGILWST*PHINHS
Trigger: GGAATGATTTATATGGGGTCAGGTGCTCCACAAAAT...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGAGTGCCTTTATAGACTaGGAACTAACGTGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMSAFID*ELTWKF
Trigger: AAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACT...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAACATCCTTTGATTTCTTaGGGGGCATTAACTGCCACA +
Preference number: 4 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQHPLIS*GALTAT
Trigger: TGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATG...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR GCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGAACGTGGAAGTTTCATaGTGTCGTCTAAATAGCCTA +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMNVEVS*CRLNSL
Trigger: TAGGCTATTTAGACGACAGCATGAAACTTCCACGTT...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGATTACTTCACGGGGGTaGAACGGAACAGTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQITSRG*NGTVCR
Trigger: GCGACAGACTGTTCCGTTCCACCCCCGTGAAGTAAT...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGAAAAGTATGAAGCATTaGCTAGGAGGGAACAAATGC +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGKSMKH*LGGNKC
Trigger: GCATTTGTTCCCTCCTAGTCAATGCTTCATACTTTT...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR GCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCTGGAGAAATGGCCCTaGTGGATCCCATTAGTTAGG +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQLEKWP*WIPLVR
Trigger: CCTAACTAATGGGATCCAGCAGGGCCATTTCTCCAG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCTCCTAATAGGATACTaGCCCTCTGGAGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQLLIGY*PSGEMA
Trigger: GGCCATTTCTCCAGAGGGCCAGTATCCTATTAGGAG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp GAGACCGGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTAGCCTAGGTCATTTTTaGTCTCATAGGTCTATTTTG +
Preference number: 4 (lower is better)
Translates to: ETGKCLYRLRTNVEVSCCSLGHF*SHRSIL
Trigger: CAAAATAGACCTATGAGACCAAAAATGACCTAGGCT...ACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACCGGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAATCATGCTCCATACAATaGAAGCAATCCTGCTTGATA +
Preference number: 4 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQSCSIQ*KQSCLI
Trigger: TATCAAGCAGGATTGCTTTCATTGTATGGAGCATGA...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp ATGCTCCATACAATGAAAGCAATCCTGCTTGATACTATTCACACGGTGCATGATCTTAAAGCTATGCACTaGATAAAGTGCTCGGTACAT +
Preference number: 4 (lower is better)
Translates to: MLHTMKAILLDTIHTVHDLKAMH*IKCSVH
Trigger: ATGTACCGAGCACTTTATTCAGTGCATAGCTTTAAG...ATCATGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTCATTGTATGGAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAAAGTGCCTTTATAGACTaGGAACTAACGTGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQSAFID*ELTWKF
Trigger: AAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACT...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CCA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGGATTTAATGTGTGTGTaGACTTTACAGTATCTACGT +
Preference number: 4 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMDLMCV*TLQYLR
Trigger: ACGTAGATACTGTAAAGTCCACACACACATTAAATC...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGGAAAGCAATCCTGCTTaGTACTATTCACACGGTGCA +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQESNPA*YYSHGA
Trigger: TGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTC...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGACAGAATATCAGAGGTaGTTGGTCCTTCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQTEYQR*LVLPLL
Trigger: CAAGAGTGGAAGGACCAATCACCTCTGATATTCTGT...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp ACTTATCTTAGGAATTCACCTACTTACAGGTTTGGGGGACAAGAATGTCAAGGGATCCTGCTTTTCACCTaGAATGAAAATACACACTTA +
Preference number: 4 (lower is better)
Translates to: TYLRNSPTYRFGGQECQGILLFT*NENTHL
Trigger: TAAGTGTGTATTTTCATTCCAGGTGAAAAGCAGGAT...CCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCCTGGATCTGGAAACTaGTTCTATCAACGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQPGSGN*FYQRCS
Trigger: ACTACAACGTTGATAGAACCAGTTTCCAGATCCAGG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
3UTR CAA 72 bp TTTTTGGAAGACACTTATAAGACATCCTTTGATTTCTaGAGGGGCATTAACTGCCACACTCAACAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: FLEDTYKTSFDF*RGINCHTQQSN
Trigger: ATTTGACTGTTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTCTTCCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR TCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGAATGAATCAAACTCTTaGTCTCCTATTCGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQNESNS*SPIRSL
Trigger: CAGACTCCGAATAGGAGATCAAGAGTTTGATTCATT...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR TCA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCTTAAAGCTATGCACTaGATAAAGTGCTCGGTACAT +
Preference number: 4 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQLKAMH*IKCSVH
Trigger: ATGTACCGAGCACTTTATTCAGTGCATAGCTTTAAG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS CCA 90 bp TCCGAGTCGAAGTTGCCCGCCATGGCTGCCTCCGCGCCTAAACGCTaGGGTGCCGCCGCCGCGCGCGCCCCTCCGGCCCCCGGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: SESKLPAMAASAPKR*GAAAARAPPAPGAR
Trigger: GCGGGCGCCGGGGGCCGGAGGGGCGCGCGCGGCGGCGGCACCCCAGCGTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCGACTCGGA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS CCA 90 bp CCCAGTACCAGCTACTCCGCTCCTCCGAGTCGAAGTTGCCCGCCATaGCTGCCTCCGCGCCTAAACGCTGGGGTGCCGCCGCCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: PSTSYSAPPSRSCPP*LPPRLNAGVPPPRA
Trigger: CGCGCGCGGCGGCGGCACCCCAGCGTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGGAGCGGAGTAGCTGGTACTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS GCA 90 bp CTGGTGCTCGAGTCCCGCACCAGGAACACCCCGTGCCGCTGGCCCTaGAGCAGCGCCACCGCCTCCTGCCGACTCAACCTCCCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: LVLESRTRNTPCRWP*SSATASCRLNLPQY
Trigger: GTACTGGGGGAGGTTGAGTCGGCAGGAGGCGGTGGCGCTGCTGCAGGGCCAGCGGCACGGGGTGTTCCTGGTGCGGGACTCGAGCACCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS GCA 90 bp TCAACCTCCCCCAGTACCAGCTACTCCGCTCCTCCGAGTCGAAGTTaGCCGCCATGGCTGCCTCCGCGCCTAAACGCTGGGGTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: STSPSTSYSAPPSRS*PPWLPPRLNAGVPP
Trigger: CGGCGGCACCCCAGCGTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGGAGCGGAGTAGCTGGTACTGGGGGAGGTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp CCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTTCCTCCGAGTCGAAGTaGCCCGCCATGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: PHSTVKSSPVVHERPWITSSESK*PAMAAS
Trigger: GGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGGA...AGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp TCCCTTCTGATACACACAGGCACGACCACTACCGCCTCCAATTGCCAATTCAGATCCTCCGAGTCGAAGTaGCCCGCCATGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SLLIHTGTTTTASNCQFRSSESK*PAMAAS
Trigger: GGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGGA...TCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGAGGAATCATCCCTCTCTaGCCTTCGCTGTCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGGIIPL*PSLSSA
Trigger: TGCGGAGGACAGCGAAGGCAAGAGAGGGATGATTCC...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGGGAATCATCCCTCTCTaGCCTTCGCTGTCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVGIIPL*PSLSSA
Trigger: TGCGGAGGACAGCGAAGGCAAGAGAGGGATGATTCC...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGACCTACTACGACCCTTTaGGGGAAGGCAGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRPTTTL*GKAESW
Trigger: CCAGCTCTCTGCCTTCCCCAAAAGGGTCGTAGTAGG...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CAA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGCCTCCACCTCCCAGGTaGAAGCAATTCTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVPPPPR*KQFSCL
Trigger: GAGGCAGGAGAATTGCTTCAACCTGGGAGGTGGAGG...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS GCA 90 bp TTCCCATTAAAGTCAAAGAGGGCTCGCACATACTCCGCCTCCTCCTaGCTGAGAATCACTCCACTACCCTGCCTGGATCTGGAAACTGGT +
Preference number: 5 (lower is better)
Translates to: FPLKSKRARTYSASS*LRITPLPCLDLETG
Trigger: ACCAGTTTCCAGATCCAGGCAGGGTAGTGGAGTGATTCTCAGGCAGGAGGAGGCGGAGTATGTGCGAGCCCTCTTTGACTTTAATGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000572145.1
CDS-3UTR CAA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGTCCTCCGAGTCGAAGTaGCCCGCCATGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMSSESK*PAMAAS
Trigger: GGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGGA...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CAA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCCACTGCTCTTCAGGCTaGTCCCGGATTCTCAAGATG +
Preference number: 5 (lower is better)
Translates to: NPAQWFMNGPGSLITEESHCSSG*SRILKM
Trigger: CATCTTGAGAATCCGGGACAAGCCTGAAGAGCAGTG...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp CCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCTTACTCATCGGGATTCTGTaGATCCAGCAGACGGACATG +
Preference number: 5 (lower is better)
Translates to: PAQWFMNGPGSLITEESLLIGIL*IQQTDM
Trigger: CATGTCCGTCTGCTGGATCAACAGAATCCCGATGAG...TAAGGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACCACTACCGCCTCCAATaGCCAATTCAGAAGCTAACA +
Preference number: 5 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDHYRLQ*PIQKLT
Trigger: TGTTAGCTTCTGAATTGGCAATTGGAGGCGGTAGTG...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp CTCATCGGGATTCTGTTGATCCAGCAGACGGACATGTGTGAATGGGAAGTGACCCACTGCTCTTCAGGCTaGTCCCGGATTCTCAAGATG +
Preference number: 5 (lower is better)
Translates to: LIGILLIQQTDMCEWEVTHCSSG*SRILKM
Trigger: CATCTTGAGAATCCGGGACAAGCCTGAAGAGCAGTG...GGTCACTTCCCATTCACACATGTCCGTCTGCTGGATCAACAGAATCCCGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398970.5
CDS-3UTR CAA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATGCAGAGGGCAGAATTaGACCCCAAAACCTTCCACA +
Preference number: 5 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGCRGQN*TPKPST
Trigger: TGTGGAAGGTTTTGGGGTCAAATTCTGCCCTCTGCA...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp GGTAAGTGCCTTTATAGACTGAGAACTAACGTGGAAGTTTCATGCTGTCGTCTAAGTGTTGACGCTGGGTaGGGCATAGGGCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GKCLYRLRTNVEVSCCRLSVDAG*GIGPRL
Trigger: GAGCCTGGGCCCTATGCCCAACCCAGCGTCAACACT...TAGACGACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS-3UTR CAA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACCTGTCAGCAAAACTGTaGAACTATACTCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDLSAKL*NYTQLK
Trigger: CTTCAGCTGAGTATAGTTCAACAGTTTTGCTGACAG...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCCACTACCGCCTCCAATaGCCAATTCAGAAGCTAACA +
Preference number: 5 (lower is better)
Translates to: NPAQWFMNGPGSLITEESHYRLQ*PIQKLT
Trigger: TGTTAGCTTCTGAATTGGCAATTGGAGGCGGTAGTG...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp TCCCTTCTGATACACACAGGCACGACCACTACCGCCTCCAATTGCCAATTCAGATTTCCACAGGGTGATTaGCACTGCCTGAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: SLLIHTGTTTTASNCQFRFPQGD*HCLRER
Trigger: CCTTTCTCTCAGGCAGTGCAAATCACCCTGTGGAAA...TCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp TGGCCCTGCTGGATCCCATTAGTTAGGACTCTAGTTAGCTGCTGTAGAAGGGTGTGCAGAGGGCAGAATTaGACCCCAAAACCTTCCACA +
Preference number: 5 (lower is better)
Translates to: WPCWIPLVRTLVSCCRRVCRGQN*TPKPST
Trigger: TGTGGAAGGTTTTGGGGTCAAATTCTGCCCTCTGCA...CACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGGGATCCAGCAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CAA 90 bp CTGGCTTCCCTGTGCCACGTCACCGGTTTCTCAGGTCTCCTCATTCACTCAGACAAAAAGTATGAAGCATaGACTAGGAGGGAACAAATG +
Preference number: 5 (lower is better)
Translates to: LASLCHVTGFSGLLIHSDKKYEA*TRREQM
Trigger: CATTTGTTCCCTCCTAGTCAATGCTTCATACTTTTT...GTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAGGGAAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp CTCATCGGGATTCTGTTGATCCAGCAGACGGACATGTGTGAATGGGAAGTGACCACATCCTTTGATTTCTaGAGGGGCATTAACTGCCAC +
Preference number: 5 (lower is better)
Translates to: LIGILLIQQTDMCEWEVTTSFDF*RGINCH
Trigger: GTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGT...GGTCACTTCCCATTCACACATGTCCGTCTGCTGGATCAACAGAATCCCGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398970.5
CDS-3UTR CAA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCTTTCCACAGGGTGATTaGCACTGCCTGAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSFPQGD*HCLRER
Trigger: CCTTTCTCTCAGGCAGTGCAAATCACCCTGTGGAAA...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp ATGCTCCATACAATGAAAGCAATCCTGCTTGATACTATTCACACGGTGCATGATCCTCCACCTCCCAGGTaGAAGCAATTCTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: MLHTMKAILLDTIHTVHDPPPPR*KQFSCL
Trigger: GAGGCAGGAGAATTGCTTCAACCTGGGAGGTGGAGG...ATCATGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTCATTGTATGGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp AACTGCCACACTCAACAGTCAAATCCAGCCCAGTGGTTCATGAACGGCCCTGGATATAAGGTGTTTCTATaGGTCATACCACACCAGAGA +
Preference number: 5 (lower is better)
Translates to: NCHTQQSNPAQWFMNGPGYKVFL*VIPHQR
Trigger: TCTCTGGTGTGGTATGACCAATAGAAACACCTTATA...TCCAGGGCCGTTCATGAACCACTGGGCTGGATTTGACTGTTGAGTGTGGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp AATCCAGCCCAGTGGTTCATGAACGGCCCTGGATCACTGATCACTGAGGAATCCAAAAAGTATGAAGCATaGACTAGGAGGGAACAAATG +
Preference number: 5 (lower is better)
Translates to: NPAQWFMNGPGSLITEESKKYEA*TRREQM
Trigger: CATTTGTTCCCTCCTAGTCAATGCTTCATACTTTTT...GGATTCCTCAGTGATCAGTGATCCAGGGCCGTTCATGAACCACTGGGCTGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp GCAGAATTTGACCCCAAAACCTTCCACAGAATATCAGAGGTGATTGGTCCTTCCCACCTACTTACAGGTTaGGGGGACAAGAATGTCAAG +
Preference number: 5 (lower is better)
Translates to: AEFDPKTFHRISEVIGPSHLLTG*GDKNVK
Trigger: CTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTG...GGAAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CAA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAAAACGCGTTAGTCTGCTaGCGGCCATGTACGGAATCC +
Preference number: 5 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQNALVC*RPCTES
Trigger: GGATTCCGTACATGGCCGCAAGCAGACTAACGCGTT...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp CTAGTTAGCTGCTGTAGAAGGGTGACCTACTACGACCCTTTTGGGGAAGGCAGAAAAAAGTATGAAGCATaGACTAGGAGGGAACAAATG +
Preference number: 5 (lower is better)
Translates to: LVSCCRRVTYYDPFGEGRKKYEA*TRREQM
Trigger: CATTTGTTCCCTCCTAGTCAATGCTTCATACTTTTT...TCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CAA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCCTACTACGACCCTTTaGGGGAAGGCAGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQPTTTL*GKAESW
Trigger: CCAGCTCTCTGCCTTCCCCAAAAGGGTCGTAGTAGG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CAA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCCTCCACCTCCCAGGTaGAAGCAATTCTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQPPPPR*KQFSCL
Trigger: GAGGCAGGAGAATTGCTTCAACCTGGGAGGTGGAGG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CAA 90 bp GAACCTAAGAATTCCAAGAGTCTCCTAATAGGATACTGGCCCTCTGGAGAAATGACATCCTTTGATTTCTaGAGGGGCATTAACTGCCAC +
Preference number: 5 (lower is better)
Translates to: EPKNSKSLLIGYWPSGEMTSFDF*RGINCH
Trigger: GTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGT...CATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp ATGCTCCATACAATGAAAGCAATCCTGCTTGATACTATTCACACGGTGCATGATCACCTACTTACAGGTTaGGGGGACAAGAATGTCAAG +
Preference number: 5 (lower is better)
Translates to: MLHTMKAILLDTIHTVHDHLLTG*GDKNVK
Trigger: CTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTG...ATCATGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTCATTGTATGGAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGAACGCGTTAGTCTGCTaGCGGCCATGTACGGAATCC +
Preference number: 5 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQNALVC*RPCTES
Trigger: GGATTCCGTACATGGCCGCAAGCAGACTAACGCGTT...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCTCATCGGGATTCTGTaGATCCAGCAGACGGACATG +
Preference number: 5 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQLIGIL*IQQTDM
Trigger: CATGTCCGTCTGCTGGATCAACAGAATCCCGATGAG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCACCTACTTACAGGTTaGGGGGACAAGAATGTCAAG +
Preference number: 5 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQHLLTG*GDKNVK
Trigger: CTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS-3UTR CAA 90 bp GACACTTATAAGACATCCTTTGATTTCTTGAGGGGCATTAACTGCCACACTCAATATAAGGTGTTTCTATaGGTCATACCACACCAGAGA +
Preference number: 5 (lower is better)
Translates to: DTYKTSFDFLRGINCHTQYKVFL*VIPHQR
Trigger: TCTCTGGTGTGGTATGACCAATAGAAACACCTTATA...TTGAGTGTGGCAGTTAATGCCCCTCAAGAAATCAAAGGATGTCTTATAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS-3UTR CAA 90 bp AACCCTACCCCAAATTCATGTAATACTAACTTGACTTTTATACAAGTTGCACAGCTGTCAGCAAAACTGTaGAACTATACTCAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: NPTPNSCNTNLTFIQVAQLSAKL*NYTQLK
Trigger: CTTCAGCTGAGTATAGTTCAACAGTTTTGCTGACAG...CTGTGCAACTTGTATAAAAGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS GCA 72 bp GAGTCCCGCACCAGGAACACCCCGTGCCGCTGGCCCTaGAGCAGCGCCACCGCCTCCTGCCGACTCAACCTC +
Preference number: 6 (lower is better)
Translates to: ESRTRNTPCRWP*SSATASCRLNL
Trigger: GAGGTTGAGTCGGCAGGAGGCGGTGGCGCTGCTGCAGGGCCAGCGGCACGGGGTGTTCCTGGTGCGGGACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS CCA 72 bp AGCTACTCCGCTCCTCCGAGTCGAAGTTGCCCGCCATaGCTGCCTCCGCGCCTAAACGCTGGGGTGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SYSAPPSRSCPP*LPPRLNAGVPP
Trigger: CGGCGGCACCCCAGCGTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGGAGCGGAGTAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS CAA 90 bp CTCAACCTCCCCCAGTACCAGCTACTCCGCTCCTCCGAGTCGAAGTaGCCCGCCATGGCTGCCTCCGCGCCTAAACGCTGGGGTGCCGCC +
Preference number: 6 (lower is better)
Translates to: LNLPQYQLLRSSESK*PAMAASAPKRWGAA
Trigger: GGCGGCACCCCAGCGTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGGAGCGGAGTAGCTGGTACTGGGGGAGGTTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300574.3
ENST00000398970.5
CDS GCA 72 bp CCCAGTACCAGCTACTCCGCTCCTCCGAGTCGAAGTTaGCCGCCATGGCTGCCTCCGCGCCTAAACGCTGGG +
Preference number: 6 (lower is better)
Translates to: PSTSYSAPPSRS*PPWLPPRLNAG
Trigger: CCCAGCGTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGGAGCGGAGTAGCTGGTACTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS CCA 72 bp GGCATAGGGCCCAGGCTCCGGCCCACCCAGTGGCTGTaGGTGGGAACCCTCCTGGTTACCTCCAATCAGAGC +
Preference number: 6 (lower is better)
Translates to: GIGPRLRPTQWL*VGTLLVTSNQS
Trigger: GCTCTGATTGGAGGTAACCAGGAGGGTTCCCACCCACAGCCACTGGGTGGGCCGGAGCCTGGGCCCTATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS CAA 72 bp CCCCAGTACCAGCTACTCCGCTCCTCCGAGTCGAAGTaGCCCGCCATGGCTGCCTCCGCGCCTAAACGCTGG +
Preference number: 6 (lower is better)
Translates to: PQYQLLRSSESK*PAMAASAPKRW
Trigger: CCAGCGTTTAGGCGCGGAGGCAGCCATGGCGGGCAACTTCGACTCGGAGGAGCGGAGTAGCTGGTACTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000574295.1
CDS CAA 90 bp TATGGGCCCATTCTGGAGGTTAGGGAGCGGAGTGTTGACGCTGGGTaGGGCATAGGGCCCAGGCTCCGGCCCACCCAGTGGCTGTGGGTG +
Preference number: 6 (lower is better)
Translates to: YGPILEVRERSVDAG*GIGPRLRPTQWLWV
Trigger: CACCCACAGCCACTGGGTGGGCCGGAGCCTGGGCCCTATGCCCAACCCAGCGTCAACACTCCGCTCCCTAACCTCCAGAATGGGCCCATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS CAA 72 bp ATTCTGGAGGTTAGGGAGCGGAGTGTTGACGCTGGGTaGGGCATAGGGCCCAGGCTCCGGCCCACCCAGTGG +
Preference number: 6 (lower is better)
Translates to: ILEVRERSVDAG*GIGPRLRPTQW
Trigger: CCACTGGGTGGGCCGGAGCCTGGGCCCTATGCCCAACCCAGCGTCAACACTCCGCTCCCTAACCTCCAGAAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS GCA 72 bp AAGTCAAAGAGGGCTCGCACATACTCCGCCTCCTCCTaGCTGAGAATCACTCCACTACCCTGCCTGGATCTG +
Preference number: 6 (lower is better)
Translates to: KSKRARTYSASS*LRITPLPCLDL
Trigger: CAGATCCAGGCAGGGTAGTGGAGTGATTCTCAGGCAGGAGGAGGCGGAGTATGTGCGAGCCCTCTTTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300574.3
ENST00000398970.5
ENST00000572145.1
CDS CCA 72 bp CGCTTCTGGATAACCCTGGCATATATGGGCCCATTCTaGAGGTTAGGGAGCGGAGTGTTGACGCTGGGTTGG +
Preference number: 6 (lower is better)
Translates to: RFWITLAYMGPF*RLGSGVLTLGW
Trigger: CCAACCCAGCGTCAACACTCCGCTCCCTAACCTCCAGAATGGGCCCATATATGCCAGGGTTATCCAGAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300574.3
CDS CCA 72 bp GCAATGAATCAAACTCTTGATCTCCTATTCGGAGTCTaGAGGGGCTCACCCAGCCATCTGCTGACGACGAGC +
Preference number: 6 (lower is better)
Translates to: AMNQTLDLLFGV*RGSPSHLLTTS
Trigger: GCTCGTCGTCAGCAGATGGCTGGGTGAGCCCCTCCAGACTCCGAATAGGAGATCAAGAGTTTGATTCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572145.1