RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRISPLD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000121005

Ensembl transcript IDs: ENST00000262207.9, ENST00000517786.1, ENST00000519798.1, ENST00000520277.1, ENST00000523524.5

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCAAGGGTTCTGGGGCTGGGAAATACGAATGTATTAAAAAGGAATaGAGAAAGACACAGGCTCCAGCTGAAGGTATTACAATAGTAAGT +
Preference number: 1 (lower is better)
Translates to: FKGSGAGKYECIKKE*RKTQAPAEGITIVS
Trigger: ACTTACTATTGTAATACCTTCAGCTGGAGCCTGTGTCTTTCTCCATTCCTTTTTAATACATTCGTATTTCCCAGCCCCAGAACCCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR TCA 90 bp CATAGAAAGCTCTGGCTGTCCATGCTTAACCCTACATTTACTACATaGTCACTAGGAATGTTTTCATACCACCACTCTGACTTTATTACA +
Preference number: 1 (lower is better)
Translates to: HRKLWLSMLNPTFTT*SLGMFSYHHSDFIT
Trigger: TGTAATAAAGTCAGAGTGGTGGTATGAAAACATTCCTAGTGATCATGTAGTAAATGTAGGGTTAAGCATGGACAGCCAGAGCTTTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR CCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGTGCTATTATACTTCCTaGCCTGCAGGAGTATTTGCC +
Preference number: 2 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQCYYTS*PAGVFA
Trigger: GGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCA...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR GCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGGCTTTCCTTGATCATTaGATGGAATTTATCTCGTTT +
Preference number: 2 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQAFLDH*MEFISF
Trigger: AAACGAGATAAATTCCATGCAATGATCAAGGAAAGC...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR CCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACGTACATAGAAAGCTCTaGCTGTCCATGCTTAACCCT +
Preference number: 2 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYVHRKL*LSMLNP
Trigger: AGGGTTAAGCATGGACAGCCAGAGCTTTCTATGTAC...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR GCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACAGCTCTGGCTGTCCATaGTTAACCCTACATTTACTA +
Preference number: 2 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYSSGCP*LTLHLL
Trigger: TAGTAAATGTAGGGTTAAGCATGGACAGCCAGAGCT...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR GCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCGCCTGCAGGAGTATTTaGCAGGATACAAAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLACRSI*QDTKEN
Trigger: ATTTTCTTTTGTATCCTGGCAAATACTCCTGCAGGC...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR CCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCGGCATAGCATTGAACTaGGGAAAATGTGATAAGGTT +
Preference number: 2 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLGIALN*GKCDKV
Trigger: AACCTTATCACATTTTCCCCAGTTCAATGCTATGCC...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR TCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAATTTAAATGCACTAGATaGTTTTCTGAGGGCCATTCA +
Preference number: 2 (lower is better)
Translates to: FLLLYFLACRSICQDTKEFKCTR*FSEGHS
Trigger: TGAATGGCCCTCAGAAAATCATCTAGTGCATTTAAA...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR TCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGTGGGCTGAAAATAGTTaGTGTACTCTGTACAGTAAT +
Preference number: 2 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLWAENS*CTLYSN
Trigger: ATTACTGTACAGAGTACATCAACTATTTTCAGCCCA...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTGGGCTGAAAATAGTTaGTGTACTCTGTACAGTAAT +
Preference number: 2 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCWAENS*CTLYSN
Trigger: ATTACTGTACAGAGTACATCAACTATTTTCAGCCCA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
3UTR-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTTTAAATGCACTAGATaGTTTTCTGAGGGCCATTCA +
Preference number: 2 (lower is better)
Translates to: VENYLRLFGVGNGIALNWFKCTR*FSEGHS
Trigger: TGAATGGCCCTCAGAAAATCATCTAGTGCATTTAAA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
3UTR-3UTR CAA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGGGTAATGGCATAGCATaGAACTGGGGAAAATGTGAT +
Preference number: 3 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQGNGIA*NWGKCD
Trigger: ATCACATTTTCCCCAGTTCAATGCTATGCCATTACC...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR CAA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACGGCCTGCAGGAGTATTaGCCAGGATACAAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYGLQEY*PGYKRK
Trigger: TTTTCTTTTGTATCCTGGCAAATACTCCTGCAGGCC...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR TCA 72 bp CTCTGGCTGTCCATGCTTAACCCTACATTTACTACATaGTCACTAGGAATGTTTTCATACCACCACTCTGAC +
Preference number: 3 (lower is better)
Translates to: LWLSMLNPTFTT*SLGMFSYHHSD
Trigger: GTCAGAGTGGTGGTATGAAAACATTCCTAGTGATCATGTAGTAAATGTAGGGTTAAGCATGGACAGCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR CAA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACGTATTATCTGCTCTCTaGCTTTCCTTGATCATTGCA +
Preference number: 3 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYVLSAL*LSLIIA
Trigger: TGCAATGATCAAGGAAAGCAAGAGAGCAGATAATAC...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR CAA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCAAGATTTATATGCATTaGGCACCTTTTTGGGCTGAA +
Preference number: 3 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLKIYMH*APFWAE
Trigger: TTCAGCCCAAAAAGGTGCCAAATGCATATAAATCTT...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR CCA 72 bp GTTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTaGCCTGCAGGAGTATTTGCCAGGATACAAAAGAAA +
Preference number: 3 (lower is better)
Translates to: VHLCSTFCYYTS*PAGVFARIQKK
Trigger: TTTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGAAGATTTATATGCATTaGGCACCTTTTTGGGCTGAA +
Preference number: 3 (lower is better)
Translates to: VENYLRLFGVGNGIALNWKIYMH*APFWAE
Trigger: TTCAGCCCAAAAAGGTGCCAAATGCATATAAATCTT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
3UTR GCA 72 bp TTTTGTATTATCTGCTCTCTTGCTTTCCTTGATCATTaGATGGAATTTATCTCGTTTATCCCTCCTAAACTC +
Preference number: 3 (lower is better)
Translates to: FCIICSLAFLDH*MEFISFIPPKL
Trigger: GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAGAGAGCAGATAATACAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGGCACTGTGGTTACTCTaGGCCACTCCCGCGCGGTAC +
Preference number: 4 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQALWLL*ATPARY
Trigger: GTACCGCGCGGGAGTGGCTCAGAGTAACCACAGTGC...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGCTGGCGGCGACCTCTTaGTCCTGCTCCGTACAGCCA +
Preference number: 4 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQLAATS*SCSVQP
Trigger: TGGCTGTACGGAGCAGGAGCAAGAGGTCGCCGCCAG...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCGCTCGCGAAGGGCCTaGGCACCGAGCGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLRSRRA*APSVRG
Trigger: CCCCCGGACGCTCGGTGCTCAGGCCCTTCGCGAGCG...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACGGGCGACGTGGGTGCTaGCTGCAGGAATACGCGAGC +
Preference number: 4 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYGRRGC*LQEYAS
Trigger: GCTCGCGTATTCCTGCAGTCAGCACCCACGTCGCCC...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAACGGACGGCCGGCCTCTaGAGCCGCCCAGAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKERTAGL*SRPEPS
Trigger: TGAAGGCTCTGGGCGGCTGCAGAGGCCGGCCGTCCG...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAACTCGGCGGCGGAGGCTaGCGGCGACCTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKELGGGG*RRPLAP
Trigger: AGGAGCAAGAGGTCGCCGCCAGCCTCCGCCGCCGAG...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGGGGATAATACCTGTCTaGCCCTTCTTTGTAGCACAG +
Preference number: 4 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQGIIPV*PFFVAQ
Trigger: CTGTGCTACAAAGAAGGGTCAGACAGGTATTATCCC...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGGGTGTCATGGACTTGTaGCTGCTGTCGTTCTATTTC +
Preference number: 4 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQGVMDL*LLSFYF
Trigger: GAAATAGAACGACAGCAGTCACAAGTCCATGACACC...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCTAC +
Preference number: 4 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQFSPGF*RSFQLY
Trigger: GTAGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAA...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCGCGCCCCAGCGTTTCTaGGCAGTAGCTGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLAPQRF*AVAAGA
Trigger: CGCTCCTGCAGCTACTGCTCAGAAACGCTGGGGCGC...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCGTTTCCTGGGAGAGGTaGGCCAAACCGGACGGCCGG +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLVSWER*AKPDGR
Trigger: CCGGCCGTCCGGTTTGGCTCACCTCTCCCAGGAAAC...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACGCGACCTCTTGCTCCTaGTCCGTACAGCCAGTACGC +
Preference number: 4 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYATSCS*SVQPVR
Trigger: GCGTACTGGCTGTACGGAGCAGGAGCAAGAGGTCGC...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAAGCTGCTTCGTTAGTCTaGCAGGGTGGGCGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKEAASLV*QGGRPS
Trigger: GCTGGGGCGCCCACCCTGGCAGACTAACGAAGCAGC...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGGATTCTGTTACTAGTTaGCCACACGACCTGTGTATA +
Preference number: 4 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQDSVTS*PHDLCI
Trigger: TATACACAGGTCGTGTGGGCAACTAGTAACAGAATC...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCGGGTGGGAAGGGAGCTaGTTCGTTAGTCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLGWEGS*FVSLPG
Trigger: CCCTGGCAGACTAACGAAGCAGCTCCCTTCCCACCC...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGTTTAAATGCACTAGATaGTTTTCTGAGGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQFKCTR*FSEGHS
Trigger: TGAATGGCCCTCAGAAAATCATCTAGTGCATTTAAA...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGATGGACAATATGGGTTaGATTCATGTTCATATGGGT +
Preference number: 4 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQMDNMG*IHVHMG
Trigger: ACCCATATGAACATGAATGCAACCCATATTGTCCAT...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp ATACTGACAGAACTGATCGGGCTTCCCTGTTGTGGGAGGAGCAGTAAGGACCAGTCATGGACTTGTGACTaGTGTCGTTCTATTTCATTT +
Preference number: 4 (lower is better)
Translates to: ILTELIGLPCCGRSSKDQSWTCD*CRSISF
Trigger: AAATGAAATAGAACGACAGCAGTCACAAGTCCATGA...CTGGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCCCCTCCAAAACTAGGTaGGCAAGCAGAACAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLPSKTR*ASRTGP
Trigger: CGGCCCTGTTCTGCTTGCCCACCTAGTTTTGGAGGG...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACGCATGTCATTGTCTGTaGTGGCCCTTTTCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYACHCL*WPFSLV
Trigger: AACGAGGGAAAAGGGCCATCACAGACAATGACATGC...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGACGTGGGTGCTGACTaGAGGAATACGCGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWDVGAD*RNTRAS
Trigger: GGAGGCTCGCGTATTCCTGCAGTCAGCACCCACGTC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCGCGGCTCCCTCAACCTaGAAGAAATGGCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLAAPST*KKWQAK
Trigger: CTTTGCCTGCCATTTCTTCCAGGTTGAGGGAGCCGC...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACTACCACGATTGTACATaGAACGTCGGGGGCCTATAT +
Preference number: 4 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYYHDCT*NVGGLY
Trigger: ATATAGGCCCCCGACGTTTCATGTACAATCGTGGTA...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACCCAATAAAGTGGCATTaGGAACCACCATGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYPIKWH*EPPWLE
Trigger: TTCCAGCCATGGTGGTTCCCAATGCCACTTTATTGG...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCCCTCCAAAACTAGGTaGGCAAGCAGAACAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWPSKTR*ASRTGP
Trigger: CGGCCCTGTTCTGCTTGCCCACCTAGTTTTGGAGGG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCAGGGCCAGAACACCTaGATGGACAATATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLQGQNT*MDNMGC
Trigger: GCAACCCATATTGTCCATTCAGGTGTTCTGGCCCTG...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACTACTCTTGGGCAATGTaGAGCAGGCTTATGAAATGG +
Preference number: 4 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYYSWAM*SRLMKW
Trigger: CCATTTCATAAGCCTGCTTCACATTGCCCAAGAGTA...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCCAACAGCAAACACTCTaGATGCCTTTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLQQQTL*MPFLLE
Trigger: CTCCAGGAGGAAAGGCATTCAGAGTGTTTGCTGTTG...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAACACTCCAGCATGTACTaGTGCTCTGCAGATACTGGA +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKEHSSMY*CSADTG
Trigger: TCCAGTATCTGCAGAGCAGCAGTACATGCTGGAGTG...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCCAGGTAGACAGCTTTaGGCCATATCTGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWPGRQL*AISAPR
Trigger: TCTGGGGGCAGATATGGCCCAAAGCTGTCTACCTGG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000523524.5
CDS-3UTR CCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCCAGGTAGACAGCTTTaGGCCATATCTGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCPGRQL*AISAPR
Trigger: TCTGGGGGCAGATATGGCCCAAAGCTGTCTACCTGG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000523524.5
CDS-3UTR CCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCCCACCAGTTTCCCTTTaGGGAGTAATTGCACACCAG +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLPPVSL*GVIAHQ
Trigger: CTGGTGTGCAATTACTCCCCAAAGGGAAACTGGTGG...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCGGACATGGGTGTCATaGACTTGTGACTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLRTWVS*TCDCCR
Trigger: ACGACAGCAGTCACAAGTCCATGACACCCATGTCCG...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAAGATCTTGTCCGGACATaGGTGTCATGGACTTGTGAC +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKEDLVRT*VSWTCD
Trigger: GTCACAAGTCCATGACACCCATGTCCGGACAAGATC...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACTGCTATTATACTTCCTaGCCTGCAGGAGTATTTGCC +
Preference number: 4 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYCYYTS*PAGVFA
Trigger: GGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCA...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCAGGGCCAGAACACCTaGATGGACAATATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWQGQNT*MDNMGC
Trigger: GCAACCCATATTGTCCATTCAGGTGTTCTGGCCCTG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCTCTGCTACTATCATCTaGTCTTGTCCGGACATGGGT +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLSATII*SCPDMG
Trigger: ACCCATGTCCGGACAAGATCAGATGATAGTAGCAGA...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCGGACATGGGTGTCATaGACTTGTGACTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCRTWVS*TCDCCR
Trigger: ACGACAGCAGTCACAAGTCCATGACACCCATGTCCG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCGGACATGGGTGTCATaGACTTGTGACTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWRTWVS*TCDCCR
Trigger: ACGACAGCAGTCACAAGTCCATGACACCCATGTCCG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAAACACTTCATAATGAATaGCCTCAGGATTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKETLHNE*PQDFPR
Trigger: CCTGGGGAAATCCTGAGGTCATTCATTATGAAGTGT...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCAACAGCAAACACTCTaGATGCCTTTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWQQQTL*MPFLLE
Trigger: CTCCAGGAGGAAAGGCATTCAGAGTGTTTGCTGTTG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCAACAGCAAACACTCTaGATGCCTTTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCQQQTL*MPFLLE
Trigger: CTCCAGGAGGAAAGGCATTCAGAGTGTTTGCTGTTG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCACCATGGCTGGAATTaGTCTAGCCATGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCHHGWN*SSHEQH
Trigger: GTGCTGTTCATGGCTAGAGCAATTCCAGCCATGGTG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGGCTTTGGGCCATATCTaGCCCCAGATGTTCATGTTA +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLALGHI*PQMFML
Trigger: TAACATGAACATCTGGGGGCAGATATGGCCCAAAGC...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTCCAGCATGTACTGCTaGTCTGCAGATACTGGACAG +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWSSMYC*SADTGQ
Trigger: CTGTCCAGTATCTGCAGAGCAGCAGTACATGCTGGA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCACTCCAGCATGTACTaGTGCTCTGCAGATACTGGA +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWHSSMY*CSADTG
Trigger: TCCAGTATCTGCAGAGCAGCAGTACATGCTGGAGTG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCACTCCAGCATGTACTaGTGCTCTGCAGATACTGGA +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCHSSMY*CSADTG
Trigger: TCCAGTATCTGCAGAGCAGCAGTACATGCTGGAGTG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAATTATACTTCCTGGCCTaGAGGAGTATTTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKELYFLA*RSICQD
Trigger: ATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAA...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAATCAACCTGGAAGAAATaGCAGGCAAAGCGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKESTWKK*QAKRPK
Trigger: TTTTGGACGCTTTGCCTGCCATTTCTTCCAGGTTGA...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCCTCTTCCACTCCTTTTaGCTCTCCAGTGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLLFHSF*LSSVKF
Trigger: AAACTTCACACTGGAGAGCCAAAAGGAGTGGAAGAG...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAAGTTTCTCCAATAAAGTaGCATTGGGAACCACCATGG +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKEVSPIK*HWEPPW
Trigger: CCATGGTGGTTCCCAATGCCACTTTATTGGAGAAAC...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAAGCCAGAACACCTGAATaGACAATATGGGTTGCATTC +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKEARTPE*TIWVAF
Trigger: GAATGCAACCCATATTGTCCATTCAGGTGTTCTGGC...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCCACCAGTTTCCCTTTaGGGAGTAATTGCACACCAG +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCPPVSL*GVIAHQ
Trigger: CTGGTGTGCAATTACTCCCCAAAGGGAAACTGGTGG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000523524.5
CDS-3UTR CCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGATCTTGTCCGGACATaGGTGTCATGGACTTGTGAC +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWDLVRT*VSWTCD
Trigger: GTCACAAGTCCATGACACCCATGTCCGGACAAGATC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACGGCATAGCATTGAACTaGGGAAAATGTGATAAGGTT +
Preference number: 4 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYGIALN*GKCDKV
Trigger: AACCTTATCACATTTTCCCCAGTTCAATGCTATGCC...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCGTACATAGAAAGCTCTaGCTGTCCATGCTTAACCCT +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLVHRKL*LSMLNP
Trigger: AGGGTTAAGCATGGACAGCCAGAGCTTTCTATGTAC...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTACCACGATTGTACATaGAACGTCGGGGGCCTATAT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCYHDCT*NVGGLY
Trigger: ATATAGGCCCCCGACGTTTCATGTACAATCGTGGTA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTACCACGATTGTACATaGAACGTCGGGGGCCTATAT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWYHDCT*NVGGLY
Trigger: ATATAGGCCCCCGACGTTTCATGTACAATCGTGGTA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGGGATAATACCTGTCTaGCCCTTCTTTGTAGCACAG +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCGIIPV*PFFVAQ
Trigger: CTGTGCTACAAAGAAGGGTCAGACAGGTATTATCCC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGGATAATACCTGTCTaGCCCTTCTTTGTAGCACAG +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWGIIPV*PFFVAQ
Trigger: CTGTGCTACAAAGAAGGGTCAGACAGGTATTATCCC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGTGTCATGGACTTGTaGCTGCTGTCGTTCTATTTC +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWGVMDL*LLSFYF
Trigger: GAAATAGAACGACAGCAGTCACAAGTCCATGACACC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTCTGCTACTATCATCTaGTCTTGTCCGGACATGGGT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWSATII*SCPDMG
Trigger: ACCCATGTCCGGACAAGATCAGATGATAGTAGCAGA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTGTGAAGCAGGCTTATaGAATGGACAGAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWCEAGL*NGQSCS
Trigger: GGAACAGCTCTGTCCATTTCATAAGCCTGCTTCACA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTGTGAAGCAGGCTTATaGAATGGACAGAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCCEAGL*NGQSCS
Trigger: GGAACAGCTCTGTCCATTTCATAAGCCTGCTTCACA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCTAC +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWFSPGF*RSFQLY
Trigger: GTAGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGCTTTGGGCCATATCTaGCCCCAGATGTTCATGTTA +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWALGHI*PQMFML
Trigger: TAACATGAACATCTGGGGGCAGATATGGCCCAAAGC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000523524.5
CDS-3UTR GCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCCTTTGGGGAGTAATTaGACACCAGGTAGACAGCTT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCPLGSN*TPGRQL
Trigger: AAGCTGTCTACCTGGTGTGCAATTACTCCCCAAAGG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCCTTTGGGGAGTAATTaGACACCAGGTAGACAGCTT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWPLGSN*TPGRQL
Trigger: AAGCTGTCTACCTGGTGTGCAATTACTCCCCAAAGG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCATGTACTGCTGCTCTaGAGATACTGGACAGATCAG +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWHVLLL*RYWTDQ
Trigger: CTGATCTGTCCAGTATCTGCAGAGCAGCAGTACATG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAACTGCTCTGCAGATACTaGACAGATCAGAATAAACTC +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKELLCRY*TDQNKL
Trigger: GAGTTTATTCTGATCTGTCCAGTATCTGCAGAGCAG...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCAAATTCTGTCCAATTaGTGGAAGCAAGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCQILSN*WKQACR
Trigger: CCTGCAAGCTTGCTTCCATCAATTGGACAGAATTTG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCAAATTCTGTCCAATTaGTGGAAGCAAGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWQILSN*WKQACR
Trigger: CCTGCAAGCTTGCTTCCATCAATTGGACAGAATTTG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCTTTGCTGTGCGCTTATaGCTTCATTTCTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLFAVRL*LHFCYY
Trigger: ATAGTAGCAGAAATGAAGTCATAAGCGCACAGCAAA...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTACTCTTGGGCAATGTaGAGCAGGCTTATGAAATGG +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCYSWAM*SRLMKW
Trigger: CCATTTCATAAGCCTGCTTCACATTGCCCAAGAGTA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTACTCTTGGGCAATGTaGAGCAGGCTTATGAAATGG +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWYSWAM*SRLMKW
Trigger: CCATTTCATAAGCCTGCTTCACATTGCCCAAGAGTA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGACACAGGCTCCAGCTaGAGGTATTACAATAGTAAG +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCDTGSS*RYYNSK
Trigger: CTTACTATTGTAATACCTTCAGCTGGAGCCTGTGTC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGGACATTCGTACCTATTaGAGGTTGTTCCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLDIRTY*RLFLCT
Trigger: AGTGCAAAGGAACAACCTGCAATAGGTACGAATGTC...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCAGCATAATGTGGATTTaGTTGCATACAGTTACGAGG +
Preference number: 4 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLSIMWI*LHTVTR
Trigger: CCTCGTAACTGTATGCAAGCAAATCCACATTATGCT...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTCTTCCTTCAAGAGCTaGCCCTCTCTCAACACTTTT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWSSFKS*PSLNTF
Trigger: AAAAGTGTTGAGAGAGGGGCAGCTCTTGAAGGAAGA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTTTTCCCTCGTTGTTTaGCTATCCACCACTCACCAT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCFSLVV*LSTTHH
Trigger: ATGGTGAGTGGTGGATAGCCAAACAACGAGGGAAAA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGCCAGAACACCTGAATaGACAATATGGGTTGCATTC +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCARTPE*TIWVAF
Trigger: GAATGCAACCCATATTGTCCATTCAGGTGTTCTGGC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAAGTTGTTCCTTTGCACTaGTCTCTTAATCTTACTTCA +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKEVVPLH*SLNLTS
Trigger: TGAAGTAAGATTAAGAGATCAGTGCAAAGGAACAAC...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGATATCTTCCCCAGTGTaGTCCCAAATTCTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWISSPV*SQILSN
Trigger: ATTGGACAGAATTTGGGAGCACACTGGGGAAGATAT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTATATCTTCCCCAGTGTaGTCCCAAATTCTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCISSPV*SQILSN
Trigger: ATTGGACAGAATTTGGGAGCACACTGGGGAAGATAT...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGATTCTGTTACTAGTTaGCCACACGACCTGTGTATA +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWDSVTS*PHDLCI
Trigger: TATACACAGGTCGTGTGGGCAACTAGTAACAGAATC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000523524.5
CDS-3UTR GCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGACAATTTGGGACATTTaGTGTGCGCTTATGACTTCA +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLTIWDI*CALMTS
Trigger: TGAAGTCATAAGCGCACAGCAAATGTCCCAAATTGT...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGACATTCGTACCTATTaGAGGTTGTTCCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWDIRTY*RLFLCT
Trigger: AGTGCAAAGGAACAACCTGCAATAGGTACGAATGTC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAATTGCAGCTCTACAGATaGTGGATTGCATTTCATAAT +
Preference number: 4 (lower is better)
Translates to: FLLLYFLACRSICQDTKELQLYR*WIAFHN
Trigger: ATTATGAAATGCAATCCAGCATCTGTAGAGCTGCAA...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGAGCTCTGGCTGTCCATaGTTAACCCTACATTTACTA +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWSSGCP*LTLHLL
Trigger: TAGTAAATGTAGGGTTAAGCATGGACAGCCAGAGCT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCTGCTCTGCAGATACTaGACAGATCAGAATAAACTC +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCLLCRY*TDQNKL
Trigger: GAGTTTATTCTGATCTGTCCAGTATCTGCAGAGCAG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTTTGCTGTGCGCTTATaGCTTCATTTCTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWFAVRL*LHFCYY
Trigger: ATAGTAGCAGAAATGAAGTCATAAGCGCACAGCAAA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGAGGATCAATAGTATATaGCAGATGAATAGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLRINSI*QMNSFP
Trigger: GGGGAAACTATTCATCTGTCATATACTATTGATCCT...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTTTCAGATACAGATTTaGCACGTCTTGACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCFQIQI*HVLTKH
Trigger: ATGCTTGGTCAAGACGTGTCAAATCTGTATCTGAAA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGAGGTCCAAAATACTCTaGATGTCATTGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWRSKIL*MSLSVM
Trigger: CATCACAGACAATGACATGCAGAGTATTTTGGACCT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR GCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTTGGGACATTTGCTGTaGGCTTATGACTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCLGHLL*AYDFIS
Trigger: AGAAATGAAGTCATAAGCGCACAGCAAATGTCCCAA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTTGGGACATTTGCTGTaGGCTTATGACTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWLGHLL*AYDFIS
Trigger: AGAAATGAAGTCATAAGCGCACAGCAAATGTCCCAA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGACAATTTGGGACATTTaGTGTGCGCTTATGACTTCA +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWTIWDI*CALMTS
Trigger: TGAAGTCATAAGCGCACAGCAAATGTCCCAAATTGT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGAGCATAATGTGGATTTaGTTGCATACAGTTACGAGG +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWSIMWI*LHTVTR
Trigger: CCTCGTAACTGTATGCAAGCAAATCCACATTATGCT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCAGCTCTACAGATGCTaGATTGCATTTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLQLYRC*IAFHNV
Trigger: TACATTATGAAATGCAATCCAGCATCTGTAGAGCTG...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGGCATAGCATTGAACTaGGGAAAATGTGATAAGGTT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCGIALN*GKCDKV
Trigger: AACCTTATCACATTTTCCCCAGTTCAATGCTATGCC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGCATAGCATTGAACTaGGGAAAATGTGATAAGGTT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWGIALN*GKCDKV
Trigger: AACCTTATCACATTTTCCCCAGTTCAATGCTATGCC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGGATTATAACAGAAAATaGCGTCCACTGACCTCATAT +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLDYNRK*RPLTSY
Trigger: ATATGAGGTCAGTGGACGCCATTTTCTGTTATAATC...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGTTGTTCCTTTGCACTaGTCTCTTAATCTTACTTCA +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWVVPLH*SLNLTS
Trigger: TGAAGTAAGATTAAGAGATCAGTGCAAAGGAACAAC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGTTGTTCCTTTGCACTaGTCTCTTAATCTTACTTCA +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCVVPLH*SLNLTS
Trigger: TGAAGTAAGATTAAGAGATCAGTGCAAAGGAACAAC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTTTAAATGCACTAGATaGTTTTCTGAGGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCFKCTR*FSEGHS
Trigger: TGAATGGCCCTCAGAAAATCATCTAGTGCATTTAAA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTAGATTTGACACGTCTTaGCCAAGCATAAGATATAGT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCRFDTS*PSIRYS
Trigger: ACTATATCTTATGCTTGGTCAAGACGTGTCAAATCT...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTCTCTGGACAACATCTaGTCTCATTCATTCACTATT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCSLDNI*SHSFTI
Trigger: AATAGTGAATGAATGAGATCAGATGTTGTCCAGAGA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS-3UTR TCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTCTCTGGACAACATCTaGTCTCATTCATTCACTATT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWSLDNI*SHSFTI
Trigger: AATAGTGAATGAATGAGATCAGATGTTGTCCAGAGA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTATGGACAATATGGGTTaGATTCATGTTCATATGGGT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCMDNMG*IHVHMG
Trigger: ACCCATATGAACATGAATGCAACCCATATTGTCCAT...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTCATGGACTTGTGACTaGTGTCGTTCTATTTCATTT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWSWTCD*CRSISF
Trigger: AAATGAAATAGAACGACAGCAGTCACAAGTCCATGA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTGCAGGTTGTTCCTTTaGACTGATCTCTTAATCTTA +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWCRLFL*TDLLIL
Trigger: TAAGATTAAGAGATCAGTGCAAAGGAACAACCTGCA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTGCAGGTTGTTCCTTTaGACTGATCTCTTAATCTTA +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCCRLFL*TDLLIL
Trigger: TAAGATTAAGAGATCAGTGCAAAGGAACAACCTGCA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTTGCAGCTCTACAGATaGTGGATTGCATTTCATAAT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCLQLYR*WIAFHN
Trigger: ATTATGAAATGCAATCCAGCATCTGTAGAGCTGCAA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTTGCAGCTCTACAGATaGTGGATTGCATTTCATAAT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWLQLYR*WIAFHN
Trigger: ATTATGAAATGCAATCCAGCATCTGTAGAGCTGCAA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCAGCTCTACAGATGCTaGATTGCATTTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCQLYRC*IAFHNV
Trigger: TACATTATGAAATGCAATCCAGCATCTGTAGAGCTG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGTCCTTGATCATTGCATaGAATTTATCTCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLSLIIA*NLSRLS
Trigger: GGATAAACGAGATAAATTCCATGCAATGATCAAGGA...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGTTAATTACCAGTATTTaGAACCACTTAGCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLLITSI*NHLAVS
Trigger: GCTTACAGCTAAGTGGTTCCAAATACTGGTAATTAA...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
3UTR CAA 72 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATaGAACTGGGGAAAATGTGATAAGGTTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIA*NWGKCDKVSFS
Trigger: ACTGAAAGAAACCTTATCACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR GCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGCTTTCCTTGATCATTaGATGGAATTTATCTCGTTT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWAFLDH*MEFISF
Trigger: AAACGAGATAAATTCCATGCAATGATCAAGGAAAGC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CCA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTTGATTTTCCTTCTCTaGACAACATCTGATCTCATT +
Preference number: 4 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCLIFLL*TTSDLI
Trigger: AATGAGATCAGATGTTGTCCAGAGAAGGAAAATCAA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CCA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTTGATTTTCCTTCTCTaGACAACATCTGATCTCATT +
Preference number: 4 (lower is better)
Translates to: VENYLRLFGVGNGIALNWLIFLL*TTSDLI
Trigger: AATGAGATCAGATGTTGTCCAGAGAAGGAAAATCAA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS CCA 90 bp GCCCCGCTCGCGAAGGGCCTGAGCACCGAGCGTCCGGGGGCGACGTaGGTGCTGACTGCAGGAATACGCGAGCCTCCGCCTCTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: APLAKGLSTERPGAT*VLTAGIREPPPLRL
Trigger: GAGCCGCAGAGGCGGAGGCTCGCGTATTCCTGCAGTCAGCACCCACGTCGCCCCCGGACGCTCGGTGCTCAGGCCCTTCGCGAGCGGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000519798.1
CDS CCA 90 bp CAGGAGCGAGGGGCGGGGACACGAACGAGGCTCGGCGGCGGAGGCTaGCGGCGACCTCTTGCTCCTGCTCCGTACAGCCAGTACGCGCAG +
Preference number: 5 (lower is better)
Translates to: QERGAGTRTRLGGGG*RRPLAPAPYSQYAQ
Trigger: CTGCGCGTACTGGCTGTACGGAGCAGGAGCAAGAGGTCGCCGCCAGCCTCCGCCGCCGAGCCTCGTTCGTGTCCCCGCCCCTCGCTCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS GCA 90 bp GAAGGGCCTGAGCACCGAGCGTCCGGGGGCGACGTGGGTGCTGACTaGAGGAATACGCGAGCCTCCGCCTCTGCGGCTCCCTCAACCTGG +
Preference number: 5 (lower is better)
Translates to: EGPEHRASGGDVGAD*RNTRASASAAPSTW
Trigger: CCAGGTTGAGGGAGCCGCAGAGGCGGAGGCTCGCGTATTCCTGCAGTCAGCACCCACGTCGCCCCCGGACGCTCGGTGCTCAGGCCCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000519798.1
CDS TCA 90 bp CTTCCACTCCTTTTGGCTCTCCAGTGTGAAGTTTCCTGGGAGAGGTaGGCCAAACCGGACGGCCGGCCTCTGCAGCCGCCCAGAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LPLLLALQCEVSWER*AKPDGRPLQPPRAF
Trigger: GAAGGCTCTGGGCGGCTGCAGAGGCCGGCCGTCCGGTTTGGCTCACCTCTCCCAGGAAACTTCACACTGGAGAGCCAAAAGGAGTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000519798.1
CDS CCA 90 bp GGACGGCCGGCCTCCGCCTCTGCGGCTCCCTCAACCTGGAAGAAATaGCAGGCAAAGCGTCCAAAATTAGACCTGCAGTTGGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: GRPASASAAPSTWKK*QAKRPKLDLQLGWE
Trigger: TTCCCACCCCAACTGCAGGTCTAATTTTGGACGCTTTGCCTGCCATTTCTTCCAGGTTGAGGGAGCCGCAGAGGCGGAGGCCGGCCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520277.1
CDS CCA 90 bp AATACGCGAGCCTCCGCCTCTGCGGCTCCCTCAACCTGGAAGAAATaGCAGGCAAAGCGTCCAAAATTAGACCTGCAGTTGGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: NTRASASAAPSTWKK*QAKRPKLDLQLGWE
Trigger: TTCCCACCCCAACTGCAGGTCTAATTTTGGACGCTTTGCCTGCCATTTCTTCCAGGTTGAGGGAGCCGCAGAGGCGGAGGCTCGCGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000519798.1
CDS TCA 90 bp TGTGGTTACTCTGAGCCACTCCCGCGCGGTACACTTCATAATGAATaGCCTCAGGATTTCCCCAGGAAAATCTCCAAGACAGGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CGYSEPLPRGTLHNE*PQDFPRKISKTGSS
Trigger: GGAAGAGCCTGTCTTGGAGATTTTCCTGGGGAAATCCTGAGGTCATTCATTATGAAGTGTACCGCGCGGGAGTGGCTCAGAGTAACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000519798.1
ENST00000520277.1
CDS GCA 90 bp GCTTGCAGGTCCATGTTCCCACAAGCAACTTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCTACATCCCATGTCATCCTCATCCATGT +
Preference number: 5 (lower is better)
Translates to: ACRSMFPQATFSPGF*RSFQLYIPCHPHPC
Trigger: ACATGGATGAGGATGACATGGGATGTAGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAAAGTTGCTTGTGGGAACATGGACCTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519798.1
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGCTGGCGGCGACCTCTaGCTCCTGCTCCGTACAGCC +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCAGGDL*LLLRTA
Trigger: GGCTGTACGGAGCAGGAGCAAGAGGTCGCCGCCAGC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS GCA 90 bp GCTTGCAGGTCCATGTTCCCACAAGCAACTTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCTACATCCCATGTTTATTCACAGTACTC +
Preference number: 5 (lower is better)
Translates to: ACRSMFPQATFSPGF*RSFQLYIPCLFTVL
Trigger: GAGTACTGTGAATAAACATGGGATGTAGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAAAGTTGCTTGTGGGAACATGGACCTGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS TCA 90 bp CAGTTACGAGGACAGTATACTCTTGGGCAATGTGAAGCAGGCTTATaGAATGGACAGAGCTGTTCCACAGTTGTTTCACAAGTCACAGCC +
Preference number: 5 (lower is better)
Translates to: QLRGQYTLGQCEAGL*NGQSCSTVVSQVTA
Trigger: GGCTGTGACTTGTGAAACAACTGTGGAACAGCTCTGTCCATTTCATAAGCCTGCTTCACATTGCCCAAGAGTATACTGTCCTCGTAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS GCA 90 bp GCTTGCAGGTCCATGTTCCCACAAGCAACTTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCTACATCCCATGTCATATACTCCATATT +
Preference number: 5 (lower is better)
Translates to: ACRSMFPQATFSPGF*RSFQLYIPCHILHI
Trigger: AATATGGAGTATATGACATGGGATGTAGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAAAGTTGCTTGTGGGAACATGGACCTGCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAAAAATTAGACCTGCAGTaGGGGTGGGAAGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: FLLLYFLACRSICQDTKEKLDLQ*GWEGSC
Trigger: GCAGCTCCCTTCCCACCCCAACTGCAGGTCTAATTT...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS GCA 90 bp ATCAACATAACCACCGTGATTTCGAACCACTCCAGCATGTACTGCTaGTCTGCAGATACTGGACAGATCAGAATAAACTCGAGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: INITTVISNHSSMYC*SADTGQIRINSSSN
Trigger: ATTGGAACTCGAGTTTATTCTGATCTGTCCAGTATCTGCAGAGCAGCAGTACATGCTGGAGTGGTTCGAAATCACGGTGGTTATGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAACCCACCAGTTTCCCTTaGGGGAGTAATTGCACACCA +
Preference number: 5 (lower is better)
Translates to: FLLLYFLACRSICQDTKEPTSFP*GSNCTP
Trigger: TGGTGTGCAATTACTCCCCAAAGGGAAACTGGTGGG...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACGGACATTCGTACCTATaGCAGGTTGTTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYGHSYL*QVVPLH
Trigger: GTGCAAAGGAACAACCTGCAATAGGTACGAATGTCC...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCGCTCTTCCACTCCTTTaGGCTCTCCAGTGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLALPLL*ALQCEV
Trigger: AACTTCACACTGGAGAGCCAAAAGGAGTGGAAGAGC...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAACTTTTCCCTCGTTGTTaGGCTATCCACCACTCACCA +
Preference number: 5 (lower is better)
Translates to: FLLLYFLACRSICQDTKELFPRC*AIHHSP
Trigger: TGGTGAGTGGTGGATAGCCAAACAACGAGGGAAAAG...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGCCCTTTTCCCTCGTaGTTTGGCTATCCACCACTC +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWGPFPS*FGYPPL
Trigger: GAGTGGTGGATAGCCAAACAACGAGGGAAAAGGGCC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCTTGATGGAAGCAAGCTaGCAGGTCCATGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLLMEAS*QVHVPT
Trigger: TGTGGGAACATGGACCTGCAAGCTTGCTTCCATCAA...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS CCA 90 bp TCATTTCTGCTACTATCATCTGATCTTGTCCGGACATGGGTGTCATaGACTTGTGACTGCTGTCGTTCTATTTCATTTGTTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SFLLLSSDLVRTWVS*TCDCCRSISFVSSS
Trigger: AGAAGAGGAAACAAATGAAATAGAACGACAGCAGTCACAAGTCCATGACACCCATGTCCGGACAAGATCAGATGATAGTAGCAGAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAATTCATCATACCACGATaGTACATGAAACGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: FLLLYFLACRSICQDTKEFIIPR*YMKRRG
Trigger: CCCCCGACGTTTCATGTACAATCGTGGTATGATGAA...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCCCACCAGTTTCCCTTaGGGGAGTAATTGCACACCA +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCPTSFP*GSNCTP
Trigger: TGGTGTGCAATTACTCCCCAAAGGGAAACTGGTGGG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000523524.5
CDS-3UTR CAA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAACGTACCTATTGCAGGTaGTTCCTTTGCACTGATCTC +
Preference number: 5 (lower is better)
Translates to: FLLLYFLACRSICQDTKERTYCR*FLCTDL
Trigger: GAGATCAGTGCAAAGGAACAACCTGCAATAGGTACG...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGGAGGACAGTATACTCTaGGGCAATGTGAAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLEDSIL*GNVKQA
Trigger: AGCCTGCTTCACATTGCCCAAGAGTATACTGTCCTC...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp GCAATGAAAACTCATGGAAGAGTTAATTTCAAGGGTTCTGGGGCTGGGAAATACGAGCATAATGTGGATTaGCTTGCATACAGTTACGAG +
Preference number: 5 (lower is better)
Translates to: AMKTHGRVNFKGSGAGKYEHNVD*LAYSYE
Trigger: CTCGTAACTGTATGCAAGCAAATCCACATTATGCTC...GTATTTCCCAGCCCCAGAACCCTTGAAATTAACTCTTCCATGAGTTTTCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS CCA 90 bp CTTATGACTTCATTTCTGCTACTATCATCTGATCTTGTCCGGACATaGGTGTCATGGACTTGTGACTGCTGTCGTTCTATTTCATTTGTT +
Preference number: 5 (lower is better)
Translates to: LMTSFLLLSSDLVRT*VSWTCDCCRSISFV
Trigger: AACAAATGAAATAGAACGACAGCAGTCACAAGTCCATGACACCCATGTCCGGACAAGATCAGATGATAGTAGCAGAAATGAAGTCATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTTGATGGAAGCAAGCTaGCAGGTCCATGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWLMEAS*QVHVPT
Trigger: TGTGGGAACATGGACCTGCAAGCTTGCTTCCATCAA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGAGAGCTGTTCCACAGTaGTTTCACAAGTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLRAVPQ*FHKSQP
Trigger: AGGCTGTGACTTGTGAAACAACTGTGGAACAGCTCT...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGAGGACAGTATACTCTaGGGCAATGTGAAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCEDSIL*GNVKQA
Trigger: AGCCTGCTTCACATTGCCCAAGAGTATACTGTCCTC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGAGGACAGTATACTCTaGGGCAATGTGAAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWEDSIL*GNVKQA
Trigger: AGCCTGCTTCACATTGCCCAAGAGTATACTGTCCTC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS GCA 90 bp GATATCTACCCAGCCACCATCATTGTCTATTATACCATAATGAATTaGAGCTCTACAGATGCTGGATTGCATTTCATAATGTACACTGCC +
Preference number: 5 (lower is better)
Translates to: DIYPATIIVYYTIMN*SSTDAGLHFIMYTA
Trigger: GGCAGTGTACATTATGAAATGCAATCCAGCATCTGTAGAGCTGCAATTCATTATGGTATAATAGACAATGATGGTGGCTGGGTAGATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAAATTCTGTCCAATaGATGGAAGCAAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLPNSVQ*MEASLQ
Trigger: CTGCAAGCTTGCTTCCATCAATTGGACAGAATTTGG...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTTCATCATACCACGATaGTACATGAAACGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCFIIPR*YMKRRG
Trigger: CCCCCGACGTTTCATGTACAATCGTGGTATGATGAA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGGTCGTTCTATTTCATTaGTTTCCTCTTCTCGAGGGG +
Preference number: 5 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLVVLFH*FPLLEG
Trigger: CCCCTCGAGAAGAGGAAACAAATGAAATAGAACGAC...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCGTACCTATTGCAGGTaGTTCCTTTGCACTGATCTC +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWRTYCR*FLCTDL
Trigger: GAGATCAGTGCAAAGGAACAACCTGCAATAGGTACG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCGTACCTATTGCAGGTaGTTCCTTTGCACTGATCTC +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCRTYCR*FLCTDL
Trigger: GAGATCAGTGCAAAGGAACAACCTGCAATAGGTACG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGGACATTCGTACCTATaGCAGGTTGTTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCGHSYL*QVVPLH
Trigger: GTGCAAAGGAACAACCTGCAATAGGTACGAATGTCC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTAGAGCTGTTCCACAGTaGTTTCACAAGTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCRAVPQ*FHKSQP
Trigger: AGGCTGTGACTTGTGAAACAACTGTGGAACAGCTCT...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGATACTCTGCATGTCATaGTCTGTGATGGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWILCMS*SVMALF
Trigger: GAAAAGGGCCATCACAGACAATGACATGCAGAGTAT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGCCAAATTCTGTCCAATaGATGGAAGCAAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWPNSVQ*MEASLQ
Trigger: CTGCAAGCTTGCTTCCATCAATTGGACAGAATTTGG...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTCCAAATTCTGTCCAATaGATGGAAGCAAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCPNSVQ*MEASLQ
Trigger: CTGCAAGCTTGCTTCCATCAATTGGACAGAATTTGG...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGTCGTTCTATTTCATTaGTTTCCTCTTCTCGAGGGG +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWVVLFH*FPLLEG
Trigger: CCCCTCGAGAAGAGGAAACAAATGAAATAGAACGAC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTACTATCATCTGATCTaGTCCGGACATGGGTGTCAT +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCYYHLI*SGHGCH
Trigger: ATGACACCCATGTCCGGACAAGATCAGATGATAGTA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTACTATCATCTGATCTaGTCCGGACATGGGTGTCAT +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWYYHLI*SGHGCH
Trigger: ATGACACCCATGTCCGGACAAGATCAGATGATAGTA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGAACAATTTGGGACATTaGCTGTGCGCTTATGACTTC +
Preference number: 5 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLNNLGH*LCAYDF
Trigger: GAAGTCATAAGCGCACAGCAAATGTCCCAAATTGTT...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAAATAATGTGGATTTGCTaGCATACAGTTACGAGGACA +
Preference number: 5 (lower is better)
Translates to: FLLLYFLACRSICQDTKEIMWIC*HTVTRT
Trigger: TGTCCTCGTAACTGTATGCAAGCAAATCCACATTAT...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGCCTGCAGGAGTATTaGCCAGGATACAAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWGLQEY*PGYKRK
Trigger: TTTTCTTTTGTATCCTGGCAAATACTCCTGCAGGCC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp CTTGCTTTCCTTGATCATTGCATGGAATTTATCTCGTTTATCCCTCCTAAACTCGTATTATCTGCTCTCTaGCTTTCCTTGATCATTGCA +
Preference number: 5 (lower is better)
Translates to: LAFLDHCMEFISFIPPKLVLSAL*LSLIIA
Trigger: TGCAATGATCAAGGAAAGCAAGAGAGCAGATAATAC...GAGTTTAGGAGGGATAAACGAGATAAATTCCATGCAATGATCAAGGAAAGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGATTTAGCAGACCTCTaGGCCTTTTCTTTCCACACA +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWDLADL*AFSFHT
Trigger: TGTGTGGAAAGAAAAGGCCAAGAGGTCTGCTAAATC...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTAACAATTTGGGACATTaGCTGTGCGCTTATGACTTC +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCNNLGH*LCAYDF
Trigger: GAAGTCATAAGCGCACAGCAAATGTCCCAAATTGTT...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGCCAGGATACAAAAGAATCTACAGATGCTGGATaGCATTTCATAATGTACACT +
Preference number: 5 (lower is better)
Translates to: FLLLYFLACRSICQDTKESTDAG*HFIMYT
Trigger: AGTGTACATTATGAAATGCAATCCAGCATCTGTAGA...TTCTTTTGTATCCTGGCAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGAGCATAATGTGGATTaGCTTGCATACAGTTACGAG +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCEHNVD*LAYSYE
Trigger: CTCGTAACTGTATGCAAGCAAATCCACATTATGCTC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTGGTAATGGCATAGCATaGAACTGGGGAAAATGTGAT +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCGNGIA*NWGKCD
Trigger: ATCACATTTTCCCCAGTTCAATGCTATGCCATTACC...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGTTATACCATAATGAATaGCAGCTCTACAGATGCTGG +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWLYHNE*QLYRCW
Trigger: CCAGCATCTGTAGAGCTGCAATTCATTATGGTATAA...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGATAATGTGGATTTGCTaGCATACAGTTACGAGGACA +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWIMWIC*HTVTRT
Trigger: TGTCCTCGTAACTGTATGCAAGCAAATCCACATTAT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TTCATCTTTGTTCAACTTTTTGCTATTATACTTCCTGGCCTGCAGGAGTATTTGTCTTTGTTCAACTTTTaGCTATTATACTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: FIFVQLFAIILPGLQEYLSLFNF*LLYFLA
Trigger: GGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGA...CAAATACTCCTGCAGGCCAGGAAGTATAATAGCAAAAAGTTGAACAAAGATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTATTTCAGATACAGATTaGACACGTCTTGACCAAGCA +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCISDTD*TRLDQA
Trigger: TGCTTGGTCAAGACGTGTCAAATCTGTATCTGAAAT...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGATTTCAGATACAGATTaGACACGTCTTGACCAAGCA +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWISDTD*TRLDQA
Trigger: TGCTTGGTCAAGACGTGTCAAATCTGTATCTGAAAT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS TCA 90 bp CTGATCTCATTCATTCACTATTTCAGATACAGATTTGACACGTCTTaGCCAAGCATAAGATATAGTTTCATGTTTTATTACCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LISFIHYFRYRFDTS*PSIRYSFMFYYQQH
Trigger: GTGCTGCTGGTAATAAAACATGAAACTATATCTTATGCTTGGTCAAGACGTGTCAAATCTGTATCTGAAATAGTGAATGAATGAGATCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTTCTACAGATGCTGGATaGCATTTCATAATGTACACT +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCSTDAG*HFIMYT
Trigger: AGTGTACATTATGAAATGCAATCCAGCATCTGTAGA...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTATAATGCTTTCTTCCTaGTCTAGTGATATCTACCCA +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCIMLSS*SSDIYP
Trigger: TGGGTAGATATCACTAGACAAGGAAGAAAGCATTAT...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp GTGGAAAATTATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGATAATGCTTTCTTCCTaGTCTAGTGATATCTACCCA +
Preference number: 5 (lower is better)
Translates to: VENYLRLFGVGNGIALNWIMLSS*SSDIYP
Trigger: TGGGTAGATATCACTAGACAAGGAAGAAAGCATTAT...CCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATAATTTTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS-3UTR CAA 90 bp TATTTGAGATTATTTGGAGTTGGTAATGGCATAGCATTGAACTGGGGAAAATGTAAGATTTATATGCATTaGGCACCTTTTTGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: YLRLFGVGNGIALNWGKCKIYMH*APFWAE
Trigger: TTCAGCCCAAAAAGGTGCCAAATGCATATAAATCTT...ACATTTTCCCCAGTTCAATGCTATGCCATTACCAACTCCAAATAATCTCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CCA 72 bp GGGGCGGGGACACGAACGAGGCTCGGCGGCGGAGGCTaGCGGCGACCTCTTGCTCCTGCTCCGTACAGCCAG +
Preference number: 6 (lower is better)
Translates to: GAGTRTRLGGGG*RRPLAPAPYSQ
Trigger: CTGGCTGTACGGAGCAGGAGCAAGAGGTCGCCGCCAGCCTCCGCCGCCGAGCCTCGTTCGTGTCCCCGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS GCA 72 bp GCTCGGCGGCGGAGGCTGGCGGCGACCTCTTGCTCCTaGTCCGTACAGCCAGTACGCGCAGAACCAGGCGCC +
Preference number: 6 (lower is better)
Translates to: ARRRRLAATSCS*SVQPVRAEPGA
Trigger: GGCGCCTGGTTCTGCGCGTACTGGCTGTACGGAGCAGGAGCAAGAGGTCGCCGCCAGCCTCCGCCGCCGAGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS GCA 72 bp GAGCACCGAGCGTCCGGGGGCGACGTGGGTGCTGACTaGAGGAATACGCGAGCCTCCGCCTCTGCGGCTCCC +
Preference number: 6 (lower is better)
Translates to: EHRASGGDVGAD*RNTRASASAAP
Trigger: GGGAGCCGCAGAGGCGGAGGCTCGCGTATTCCTGCAGTCAGCACCCACGTCGCCCCCGGACGCTCGGTGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000519798.1
CDS CAA 90 bp CGGGGACACGAACGAGGCTCGGCGGCGGAGGCTGGCGGCGACCTCTaGCTCCTGCTCCGTACAGCCAGTACGCGCAGAACCAGGCGCCTA +
Preference number: 6 (lower is better)
Translates to: RGHERGSAAEAGGDL*LLLRTASTRRTRRL
Trigger: TAGGCGCCTGGTTCTGCGCGTACTGGCTGTACGGAGCAGGAGCAAGAGGTCGCCGCCAGCCTCCGCCGCCGAGCCTCGTTCGTGTCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS CAA 90 bp ACCTGGAAGAAATGGCAGGCAAAGCGTCCAAAATTAGACCTGCAGTaGGGGTGGGAAGGGAGCTGCTTCGTTAGTCTGCCAGGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: TWKKWQAKRPKLDLQ*GWEGSCFVSLPGWA
Trigger: CGCCCACCCTGGCAGACTAACGAAGCAGCTCCCTTCCCACCCCAACTGCAGGTCTAATTTTGGACGCTTTGCCTGCCATTTCTTCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000519798.1
ENST00000520277.1
CDS CCA 72 bp GCCTCCGCCTCTGCGGCTCCCTCAACCTGGAAGAAATaGCAGGCAAAGCGTCCAAAATTAGACCTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: ASASAAPSTWKK*QAKRPKLDLQL
Trigger: CAACTGCAGGTCTAATTTTGGACGCTTTGCCTGCCATTTCTTCCAGGTTGAGGGAGCCGCAGAGGCGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000519798.1
ENST00000520277.1
CDS CAA 72 bp AAATGGCAGGCAAAGCGTCCAAAATTAGACCTGCAGTaGGGGTGGGAAGGGAGCTGCTTCGTTAGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: KWQAKRPKLDLQ*GWEGSCFVSLP
Trigger: TGGCAGACTAACGAAGCAGCTCCCTTCCCACCCCAACTGCAGGTCTAATTTTGGACGCTTTGCCTGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000519798.1
ENST00000520277.1
CDS CAA 90 bp TTCCCCAGTGTGCTCCCAAATTCTGTCCAATTGATGGAAGCAAGCTaGCAGGTCCATGTTCCCACAAGCAACTTTCAGCCCAGGATTCTG +
Preference number: 6 (lower is better)
Translates to: FPSVLPNSVQLMEAS*QVHVPTSNFQPRIL
Trigger: CAGAATCCTGGGCTGAAAGTTGCTTGTGGGAACATGGACCTGCAAGCTTGCTTCCATCAATTGGACAGAATTTGGGAGCACACTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000519798.1
ENST00000523524.5
CDS TCA 72 bp TCTGAGCCACTCCCGCGCGGTACACTTCATAATGAATaGCCTCAGGATTTCCCCAGGAAAATCTCCAAGACA +
Preference number: 6 (lower is better)
Translates to: SEPLPRGTLHNE*PQDFPRKISKT
Trigger: TGTCTTGGAGATTTTCCTGGGGAAATCCTGAGGTCATTCATTATGAAGTGTACCGCGCGGGAGTGGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000519798.1
ENST00000520277.1
CDS CCA 72 bp CCTTTGGGGAGTAATTGCACACCAGGTAGACAGCTTTaGGCCATATCTGCCCCCAGATGTTCATGTTATGAC +
Preference number: 6 (lower is better)
Translates to: PLGSNCTPGRQL*AISAPRCSCYD
Trigger: GTCATAACATGAACATCTGGGGGCAGATATGGCCCAAAGCTGTCTACCTGGTGTGCAATTACTCCCCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000523524.5
CDS CAA 72 bp CTGCATGTCATTGTCTGTGATGGCCCTTTTCCCTCGTaGTTTGGCTATCCACCACTCACCATCCTCATCCAT +
Preference number: 6 (lower is better)
Translates to: LHVIVCDGPFPS*FGYPPLTILIH
Trigger: ATGGATGAGGATGGTGAGTGGTGGATAGCCAAACAACGAGGGAAAAGGGCCATCACAGACAATGACATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000520277.1
CDS CAA 72 bp GTGCTCCCAAATTCTGTCCAATTGATGGAAGCAAGCTaGCAGGTCCATGTTCCCACAAGCAACTTTCAGCCC +
Preference number: 6 (lower is better)
Translates to: VLPNSVQLMEAS*QVHVPTSNFQP
Trigger: GGGCTGAAAGTTGCTTGTGGGAACATGGACCTGCAAGCTTGCTTCCATCAATTGGACAGAATTTGGGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000519798.1
ENST00000523524.5
CDS GCA 72 bp ACCACCGTGATTTCGAACCACTCCAGCATGTACTGCTaGTCTGCAGATACTGGACAGATCAGAATAAACTCG +
Preference number: 6 (lower is better)
Translates to: TTVISNHSSMYC*SADTGQIRINS
Trigger: CGAGTTTATTCTGATCTGTCCAGTATCTGCAGAGCAGCAGTACATGCTGGAGTGGTTCGAAATCACGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS GCA 72 bp TCCATGTTCCCACAAGCAACTTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCTACATCCCATGTCATCCT +
Preference number: 6 (lower is better)
Translates to: SMFPQATFSPGF*RSFQLYIPCHP
Trigger: AGGATGACATGGGATGTAGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAAAGTTGCTTGTGGGAACATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519798.1
CDS CAA 90 bp GGACATGGGTGTCATGGACTTGTGACTGCTGTCGTTCTATTTCATTaGTTTCCTCTTCTCGAGGGGGATAATACCTGTCTGACCCTTCTT +
Preference number: 6 (lower is better)
Translates to: GHGCHGLVTAVVLFH*FPLLEGDNTCLTLL
Trigger: AAGAAGGGTCAGACAGGTATTATCCCCCTCGAGAAGAGGAAACAAATGAAATAGAACGACAGCAGTCACAAGTCCATGACACCCATGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CAA 72 bp ATGTCATTGTCTGTGATGGCCCTTTTCCCTCGTTGTTaGGCTATCCACCACTCACCATCCTCATCCATGTAT +
Preference number: 6 (lower is better)
Translates to: MSLSVMALFPRC*AIHHSPSSSMY
Trigger: ATACATGGATGAGGATGGTGAGTGGTGGATAGCCAAACAACGAGGGAAAAGGGCCATCACAGACAATGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000520277.1
CDS CAA 90 bp ATGTTCATATGGGTAGCTAAAGTCTTTCACTTCATCATACCACGATaGTACATGAAACGTCGGGGGCCTATATCTTCCCCAGTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: MFIWVAKVFHFIIPR*YMKRRGPISSPVCS
Trigger: GGAGCACACTGGGGAAGATATAGGCCCCCGACGTTTCATGTACAATCGTGGTATGATGAAGTGAAAGACTTTAGCTACCCATATGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS TCA 72 bp CTAAAGTCTTTCACTTCATCATACCACGATTGTACATaGAACGTCGGGGGCCTATATCTTCCCCAGTGTGCT +
Preference number: 6 (lower is better)
Translates to: LKSFTSSYHDCT*NVGGLYLPQCA
Trigger: AGCACACTGGGGAAGATATAGGCCCCCGACGTTTCATGTACAATCGTGGTATGATGAAGTGAAAGACTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS GCA 72 bp TCCATGTTCCCACAAGCAACTTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCTACATCCCATGTCATATA +
Preference number: 6 (lower is better)
Translates to: SMFPQATFSPGF*RSFQLYIPCHI
Trigger: TATATGACATGGGATGTAGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAAAGTTGCTTGTGGGAACATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262207.9
CDS GCA 72 bp GATCTTGTCCGGACATGGGTGTCATGGACTTGTGACTaGTGTCGTTCTATTTCATTTGTTTCCTCTTCTCGA +
Preference number: 6 (lower is better)
Translates to: DLVRTWVSWTCD*CRSISFVSSSR
Trigger: TCGAGAAGAGGAAACAAATGAAATAGAACGACAGCAGTCACAAGTCCATGACACCCATGTCCGGACAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS GCA 72 bp TCCATGTTCCCACAAGCAACTTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCTACATCCCATGTTTATTC +
Preference number: 6 (lower is better)
Translates to: SMFPQATFSPGF*RSFQLYIPCLF
Trigger: GAATAAACATGGGATGTAGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAAAGTTGCTTGTGGGAACATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS CAA 72 bp TGGGTAGCTAAAGTCTTTCACTTCATCATACCACGATaGTACATGAAACGTCGGGGGCCTATATCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: WVAKVFHFIIPR*YMKRRGPISSP
Trigger: TGGGGAAGATATAGGCCCCCGACGTTTCATGTACAATCGTGGTATGATGAAGTGAAAGACTTTAGCTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CAA 90 bp ATACTCTGCATGTCATTGTCTGTGATGGCCCTTTTCCCTCGTTGTTaGGCTATCCACCACTCACCATCCTCATCCATGTATTTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: ILCMSLSVMALFPRC*AIHHSPSSSMYFSK
Trigger: TTTGGAAAAATACATGGATGAGGATGGTGAGTGGTGGATAGCCAAACAACGAGGGAAAAGGGCCATCACAGACAATGACATGCAGAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262207.9
ENST00000520277.1
CDS TCA 72 bp GGACAGTATACTCTTGGGCAATGTGAAGCAGGCTTATaGAATGGACAGAGCTGTTCCACAGTTGTTTCACAA +
Preference number: 6 (lower is better)
Translates to: GQYTLGQCEAGL*NGQSCSTVVSQ
Trigger: TTGTGAAACAACTGTGGAACAGCTCTGTCCATTTCATAAGCCTGCTTCACATTGCCCAAGAGTATACTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CAA 72 bp TGTCATGGACTTGTGACTGCTGTCGTTCTATTTCATTaGTTTCCTCTTCTCGAGGGGGATAATACCTGTCTG +
Preference number: 6 (lower is better)
Translates to: CHGLVTAVVLFH*FPLLEGDNTCL
Trigger: CAGACAGGTATTATCCCCCTCGAGAAGAGGAAACAAATGAAATAGAACGACAGCAGTCACAAGTCCATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CAA 90 bp TCCTCATCCATGTATTTTTCCAAAAGTTTCTCCAATAAAGTGGCATaGGGAACCACCATGGCTGGAATTGCTCTAGCCATGAACAGCACT +
Preference number: 6 (lower is better)
Translates to: SSSMYFSKSFSNKVA*GTTMAGIALAMNST
Trigger: AGTGCTGTTCATGGCTAGAGCAATTCCAGCCATGGTGGTTCCCAATGCCACTTTATTGGAGAAACTTTTGGAAAAATACATGGATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000519798.1
ENST00000520277.1
CDS CCA 72 bp CTACTATCATCTGATCTTGTCCGGACATGGGTGTCATaGACTTGTGACTGCTGTCGTTCTATTTCATTTGTT +
Preference number: 6 (lower is better)
Translates to: LLSSDLVRTWVS*TCDCCRSISFV
Trigger: AACAAATGAAATAGAACGACAGCAGTCACAAGTCCATGACACCCATGTCCGGACAAGATCAGATGATAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CAA 72 bp TCGAGTTCCAATTACACGAGCATAATGTGGATTTGCTaGCATACAGTTACGAGGACAGTATACTCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: SSSNYTSIMWIC*HTVTRTVYSWA
Trigger: TGCCCAAGAGTATACTGTCCTCGTAACTGTATGCAAGCAAATCCACATTATGCTCGTGTAATTGGAACTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS GCA 72 bp AACTCGAGTTCCAATTACACGAGCATAATGTGGATTTaGTTGCATACAGTTACGAGGACAGTATACTCTTGG +
Preference number: 6 (lower is better)
Translates to: NSSSNYTSIMWI*LHTVTRTVYSW
Trigger: CCAAGAGTATACTGTCCTCGTAACTGTATGCAAGCAAATCCACATTATGCTCGTGTAATTGGAACTCGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CAA 90 bp GATCAGAATAAACTCGAGTTCCAATTACACGAGCATAATGTGGATTaGCTTGCATACAGTTACGAGGACAGTATACTCTTGGGCAATGTG +
Preference number: 6 (lower is better)
Translates to: DQNKLEFQLHEHNVD*LAYSYEDSILLGNV
Trigger: CACATTGCCCAAGAGTATACTGTCCTCGTAACTGTATGCAAGCAAATCCACATTATGCTCGTGTAATTGGAACTCGAGTTTATTCTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CAA 90 bp CTACATCCCATGTTTATTCACAGTACTCTTGATTTAGCAGACCTCTaGGCCTTTTCTTTCCACACAGGAGTTTCCATGTTCTTATTCCAT +
Preference number: 6 (lower is better)
Translates to: LHPMFIHSTLDLADL*AFSFHTGVSMFLFH
Trigger: ATGGAATAAGAACATGGAAACTCCTGTGTGGAAAGAAAAGGCCAAGAGGTCTGCTAAATCAAGAGTACTGTGAATAAACATGGGATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517786.1
ENST00000523524.5
CDS CAA 72 bp AAACTCGAGTTCCAATTACACGAGCATAATGTGGATTaGCTTGCATACAGTTACGAGGACAGTATACTCTTG +
Preference number: 6 (lower is better)
Translates to: KLEFQLHEHNVD*LAYSYEDSILL
Trigger: CAAGAGTATACTGTCCTCGTAACTGTATGCAAGCAAATCCACATTATGCTCGTGTAATTGGAACTCGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS TCA 72 bp GGACATTCGTACCTATTGCAGGTTGTTCCTTTGCACTaGTCTCTTAATCTTACTTCACAAGAAACAATTTGG +
Preference number: 6 (lower is better)
Translates to: GHSYLLQVVPLH*SLNLTSQETIW
Trigger: CCAAATTGTTTCTTGTGAAGTAAGATTAAGAGATCAGTGCAAAGGAACAACCTGCAATAGGTACGAATGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS GCA 72 bp CCAGCCACCATCATTGTCTATTATACCATAATGAATTaGAGCTCTACAGATGCTGGATTGCATTTCATAATG +
Preference number: 6 (lower is better)
Translates to: PATIIVYYTIMN*SSTDAGLHFIM
Trigger: CATTATGAAATGCAATCCAGCATCTGTAGAGCTGCAATTCATTATGGTATAATAGACAATGATGGTGGCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CAA 72 bp CCCAGCCACCATCATTGTCTATTATACCATAATGAATaGCAGCTCTACAGATGCTGGATTGCATTTCATAAT +
Preference number: 6 (lower is better)
Translates to: PSHHHCLLYHNE*QLYRCWIAFHN
Trigger: ATTATGAAATGCAATCCAGCATCTGTAGAGCTGCAATTCATTATGGTATAATAGACAATGATGGTGGCTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5
CDS CAA 90 bp TTGAATACCATTTCTATTGGACTTGATGAAATAATGCTTTCTTCCTaGTCTAGTGATATCTACCCAGCCACCATCATTGTCTATTATACC +
Preference number: 6 (lower is better)
Translates to: LNTISIGLDEIMLSS*SSDIYPATIIVYYT
Trigger: GGTATAATAGACAATGATGGTGGCTGGGTAGATATCACTAGACAAGGAAGAAAGCATTATTTCATCAAGTCCAATAGAAATGGTATTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262207.9
ENST00000517786.1
ENST00000523524.5