Pregenerated sensors for CRISP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000124490Ensembl transcript IDs: ENST00000339139.5, ENST00000616725.4, ENST00000618917.4
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GAAAGTGATTTCTGTGATGATCTGGGGGAGAAGATGCATTGCTCTTaGAAATCAAATTTGTCACTAACATACATACAATTTCCACTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ESDFCDDLGEKMHCS*KSNLSLTYIQFPLV Trigger: TACCAGTGGAAATTGTATGTATGTTAGTGACAAATTTGATTTCAAAGAGCAATGCATCTTCTCCCCCAGATCATCACAGAAATCACTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| 3UTR TCA 72 bp | CATACATACAATTTCCACTGGTATGTCGCAATTAAATaGTGCAGCCCTTATCCATGCAGTCTTGCACAATGC | + |
|
Preference number: 3 (lower is better) Translates to: HTYNFHWYVAIK*CSPYPCSLAQC Trigger: GCATTGTGCAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAATTGTATGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGCGGCGTTGAGGAGCTaGGGCGCGCCCCTCTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLAALRS*GAPLSP Trigger: CGGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGTTGGGCCGGCGCGTTaGGGCGTTGAGGAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLVGPAR*GVEELR Trigger: CCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAAC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGAGACCTTCCTGCAGTTaGGCCGGCGCGTTGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLRPSCS*AGALRR Trigger: ACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCT...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339139.5 ENST00000616725.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGAACCCTTCCTGCAGTTaGGCCGGCGCGTTGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLNPSCS*AGALRR Trigger: ACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGGTT...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGAGCACAGACCTTCCTaGAGTTGGGCCGGCGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLEHRPS*SWAGAL Trigger: CAACGCGCCGGCCCAACTGCAGGAAGGTCTGTGCTC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339139.5 ENST00000616725.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTTTTATAACCCTTCCTaGAGTTGGGCCGGCGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLFYNPS*SWAGAL Trigger: CAACGCGCCGGCCCAACTGCAGGAAGGGTTATAAAA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTGCAGCCCTTATCCATaGAGTCTTGCACAATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLCSPYP*SLAQCS Trigger: TGAGCATTGTGCAAGACTGCATGGATAAGGGCTGCA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGTCCAACAACTGCATTaGGACTCTTTGGTCCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLVQQLH*DSLVLH Trigger: GTGTAGGACCAAAGAGTCCCAATGCAGTTGTTGGAC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR TCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGGAAGTAGGGTCACTTaGCATATAGAGATTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLGSRVT*HIEILT Trigger: GGTGAGAATCTCTATATGTCAAGTGACCCTACTTCC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR TCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCCTTGCACTTTTCCTTaGGTAACTCATGTTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLPCTFP*VTHVHS Trigger: GCTGTGAACATGAGTTACTCAAGGAAAAGTGCAAGG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGATACCAGCTTTGGATTaGAGAAGACCAGGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLIPALD*RRPGSR Trigger: CCTACTTCCTGGTCTTCTGCAATCCAAAGCTGGTAT...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTATAACCATTTACCCTaGCTCCAGAGCACAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLYNHLP*LQSTDL Trigger: AAGGTCTGTGCTCTGGAGCCAGGGTAAATGGTTATA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339139.5 ENST00000616725.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTCTTTAGCATGTTACTaGCAGGTGGAGAGACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLSLACY*QVERLL Trigger: AAGCAGTCTCTCCACCTGCCAGTAACATGCTAAAGA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTTGTTTGCCCACCTTTaGGCATTCGTTGTTACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLLFAHL*AFVVTS Trigger: AGAGGTAACAACGAATGCCCAAAGGTGGGCAAACAA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTCGTCATACCAGCTTTaGATTGCAGAAGACCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLSSYQL*IAEDQE Trigger: TTCCTGGTCTTCTGCAATCCAAAGCTGGTATGACGA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR TCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTATGTCGCAATTAAATaGTGCAGCCCTTATCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLYVAIK*CSPYPC Trigger: GCATGGATAAGGGCTGCATCATTTAATTGCGACATA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR TCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGAAGTTGTTCTCCTCTaGGAAGTTGAAAGTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLEVVLL*EVESVS Trigger: TGAGACACTTTCAACTTCTCAGAGGAGAACAACTTC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTTTACAATCTCCCTTTaGACTTGCAACTGGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLFTISL*TCNWVV Trigger: AACCACCCAGTTGCAAGTGCAAAGGGAGATTGTAAA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTCGTTGTTACCTCTCTaGTCCATTCCATCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLSLLPL*SIPSLA Trigger: TGCTAAAGATGGAATGGAGCAGAGAGGTAACAACGA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGATCTTGTACTGGTTTTaGGGTCCTCTGGATCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLILYWF*GPLDHY Trigger: ATAGTGATCCAGAGGACCGCAAAACCAGTACAAGAT...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTGCATTGGGACTCTTTaGTCCTACACCATAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLCIGTL*SYTIDK Trigger: TTTGTCTATGGTGTAGGACCAAAGAGTCCCAATGCA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCAAGGTGTTCCTTGTTaGTACGGGGTATTCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLQGVPC*YGVFFL Trigger: TAGAAAGAATACCCCGTACCAACAAGGAACACCTTG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGATACTGGCAACTATTaGTGCATAGTCCTTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLDTGNY*CIVLCH Trigger: GTGACAAAGGACTATGCACCAATAGTTGCCAGTATC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGATTTCTGTGATGATCTaGGGGAGAAGATGCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLISVMI*GRRCIA Trigger: AGCAATGCATCTTCTCCCCCAGATCATCACAGAAAT...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR TCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTTACTTAGGAGATCTTaGTACTGGCAACTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLLLRRS*YWQLLV Trigger: CACCAATAGTTGCCAGTATCAAGATCTCCTAAGTAA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTACTGTGCTCTTTCTTaGAGGTGTTTTAAGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLYCALS*RCFKIR Trigger: CCTGATCTTAAAACACCTGCAAGAAAGAGCACAGTA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGAATGGTGAAGTACTGTaGTCTTTCTTGCAGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLNGEVL*SFLQVF Trigger: AAACACCTGCAAGAAAGAGCACAGTACTTCACCATT...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCACTATGTTGTAAAGTaGACTTGTTTGCCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLHYVVK*TCLPTF Trigger: AAAGGTGGGCAAACAAGTGCACTTTACAACATAGTG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTGCAGTCTTGCACAATaGTCACTAGGTAAATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLCSLAQ*SLGKSV Trigger: TACTGATTTACCTAGTGAGCATTGTGCAAGACTGCA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTTAGACTATCTTGATTaGGACAGTAGGCAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISTGMSQLNDAALIHAVLLDYLD*DSRQFH Trigger: GTGGAATTGCCTACTGTCCCAATCAAGATAGTCTAA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| 3UTR CAA 72 bp | TTCTGTGATGATCTGGGGGAGAAGATGCATTGCTCTTaGAAATCAAATTTGTCACTAACATACATACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FCDDLGEKMHCS*KSNLSLTYIQF Trigger: AAATTGTATGTATGTTAGTGACAAATTTGATTTCAAAGAGCAATGCATCTTCTCCCCCAGATCATCACAGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS GCA 90 bp | CCCTGGCTCCAGAGCACAGACCTTCCTGCAGTTGGGCCGGCGCGTTaGGGCGTTGAGGAGCTGCGGCGCGCCCCTCTCACCGCGATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PWLQSTDLPAVGPAR*GVEELRRAPLTAIV Trigger: AACAATCGCGGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCTGTGCTCTGGAGCCAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616725.4 |
||
| CDS TCA 90 bp | CCAGAGCACAGACCTTCCTGCAGTTGGGCCGGCGCGTTGCGGCGTTaGGGAGCTGCGGCGCGCCCCTCTCACCGCGATTGTTCACTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PEHRPSCSWAGALRR*GAAARPSHRDCSLA Trigger: GGCAAGTGAACAATCGCGGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCTGTGCTCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616725.4 |
||
| CDS GCA 90 bp | ATGGTGTATAATTTTATAACCCTTCCTGCAGTTGGGCCGGCGCGTTaGGGCGTTGAGGAGCTGCGGCGCGCCCCTCTCACCGCGATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: MVYNFITLPAVGPAR*GVEELRRAPLTAIV Trigger: AACAATCGCGGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGGTTATAAAATTATACACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCAGACCTTCCTGCAGTaGGGCCGGCGCGTTGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLQTFLQ*GRRVAA Trigger: CGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCTG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339139.5 ENST00000616725.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCCCCTCTCACCGCGATaGTTCACTTGCCAGGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLPLSPR*FTCQAP Trigger: TGGCGCCTGGCAAGTGAACAATCGCGGTGAGAGGGG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616725.4 ENST00000618917.4 |
||
| CDS GCA 90 bp | ATCTTGTACTGGTTTTGCGGTCCTCTGGATCACTATGTTGTAAAGTaGACTTGTTTGCCCACCTTTGGGCATTCGTTGTTACCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILYWFCGPLDHYVVK*TCLPTFGHSLLPLC Trigger: GCAGAGAGGTAACAACGAATGCCCAAAGGTGGGCAAACAAGTGCACTTTACAACATAGTGATCCAGAGGACCGCAAAACCAGTACAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCTTGTTTGCCCACCTTaGGGCATTCGTTGTTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLLVCPP*GIRCYL Trigger: GAGGTAACAACGAATGCCCAAAGGTGGGCAAACAAG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGTAAAGTGCACTTGTTaGCCCACCTTTGGGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLVKCTC*PTFGHS Trigger: CGAATGCCCAAAGGTGGGCAAACAAGTGCACTTTAC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCTCGTCATACCAGCTTaGGATTGCAGAAGACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLLVIPA*DCRRPG Trigger: TCCTGGTCTTCTGCAATCCAAAGCTGGTATGACGAG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGGCACAAGGTGTTCCTaGTTGGTACGGGGTATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLGTRCS*LVRGIL Trigger: AAGAATACCCCGTACCAACAAGGAACACCTTGTGCC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGACCTTTGGGCATTCGTaGTTACCTCTCTGCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLTFGHS*LPLCSI Trigger: AATGGAGCAGAGAGGTAACAACGAATGCCCAAAGGT...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTGTTGTAAAGTGCACTaGTTTGCCCACCTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLCCKVH*FAHLWA Trigger: TGCCCAAAGGTGGGCAAACAAGTGCACTTTACAACA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGGATTCTCACCACATCTaGTACTGGTTTTGCGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLDSHHI*YWFCGP Trigger: AGGACCGCAAAACCAGTACAAGATGTGGTGAGAATC...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCTGCATTGGGACTCTTaGGTCCTACACCATAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLLHWDS*VLHHRQ Trigger: TTGTCTATGGTGTAGGACCAAAGAGTCCCAATGCAG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTGTCCAACAACTGCATaGGGACTCTTTGGTCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLCPTTA*GLFGPT Trigger: TGTAGGACCAAAGAGTCCCAATGCAGTTGTTGGACA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTTGGTGCATAGTCCTTaGTCACAGTCATCAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLLVHSP*SQSSGQ Trigger: TTGCCCTGATGACTGTGACAAAGGACTATGCACCAA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCCGGTAGTAAAGCCATaGCTGGAAATGTTGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLPVVKP*LEMLVF Trigger: GAAAACCAACATTTCCAGCAATGGCTTTACTACCGG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339139.5 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGACAAGGTGTTCCTTGTaGGTACGGGGTATTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLTRCSL*VRGILS Trigger: AGAAAGAATACCCCGTACCAACAAGGAACACCTTGT...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCATAGGCAAGTAGCCTaGCACTTTTCCTTGAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLHRQVA*HFSLSN Trigger: GTTACTCAAGGAAAAGTGCAAGGCTACTTGCCTATG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGCCGGTAGTAAAGCCATaGCTGGAAATAATGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLPVVKP*LEIMVK Trigger: CTTCACCATTATTTCCAGCAATGGCTTTACTACCGG...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616725.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGACTGAAAGTGAGAAGTaGTTCTCCTCTGAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLTESEK*FSSEKL Trigger: CAACTTCTCAGAGGAGAACAACTTCTCACTTTCAGT...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618917.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGGTATGTCGCAATTAAATGATGCAGCCCTTATCCATGCAGTCTTGTGTCAGAGTTCACAGTaGTCATCATCTACTATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: ISTGMSQLNDAALIHAVLCQSSQ*SSSTML Trigger: TAGCATAGTAGATGATGACAACTGTGAACTCTGACA...CAAGACTGCATGGATAAGGGCTGCATCATTTAATTGCGACATACCAGTGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS GCA 72 bp | CAGAGCACAGACCTTCCTGCAGTTGGGCCGGCGCGTTaGGGCGTTGAGGAGCTGCGGCGCGCCCCTCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: QSTDLPAVGPAR*GVEELRRAPLT Trigger: GGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCTGTGCTCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616725.4 |
||
| CDS CAA 72 bp | CAGACCTTCCTGCAGTTGGGCCGGCGCGTTGCGGCGTaGAGGAGCTGCGGCGCGCCCCTCTCACCGCGATTG | + |
|
Preference number: 6 (lower is better) Translates to: QTFLQLGRRVAA*RSCGAPLSPRL Trigger: CAATCGCGGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616725.4 |
||
| CDS TCA 72 bp | AACCCTTCCTGCAGTTGGGCCGGCGCGTTGCGGCGTTaGGGAGCTGCGGCGCGCCCCTCTCACCGCGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: NPSCSWAGALRR*GAAARPSHRDC Trigger: ACAATCGCGGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618917.4 |
||
| CDS TCA 72 bp | AGACCTTCCTGCAGTTGGGCCGGCGCGTTGCGGCGTTaGGGAGCTGCGGCGCGCCCCTCTCACCGCGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: RPSCSWAGALRR*GAAARPSHRDC Trigger: ACAATCGCGGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616725.4 |
||
| CDS GCA 72 bp | CTGCAGTTGGGCCGGCGCGTTGCGGCGTTGAGGAGCTaGGGCGCGCCCCTCTCACCGCGATTGTTCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LQLGRRVAALRS*GAPLSPRLFTC Trigger: GCAAGTGAACAATCGCGGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000616725.4 ENST00000618917.4 |
||
| CDS CAA 90 bp | TCCAGAGCACAGACCTTCCTGCAGTTGGGCCGGCGCGTTGCGGCGTaGAGGAGCTGCGGCGCGCCCCTCTCACCGCGATTGTTCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRAQTFLQLGRRVAA*RSCGAPLSPRLFTC Trigger: GCAAGTGAACAATCGCGGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCTGTGCTCTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616725.4 |
||
| CDS CAA 72 bp | ATTTACCCTGGCTCCAGAGCACAGACCTTCCTGCAGTaGGGCCGGCGCGTTGCGGCGTTGAGGAGCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: IYPGSRAQTFLQ*GRRVAALRSCG Trigger: GCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCTGTGCTCTGGAGCCAGGGTAAAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616725.4 |
||
| CDS GCA 72 bp | AATTTTATAACCCTTCCTGCAGTTGGGCCGGCGCGTTaGGGCGTTGAGGAGCTGCGGCGCGCCCCTCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: NFITLPAVGPAR*GVEELRRAPLT Trigger: GGTGAGAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGGTTATAAAATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618917.4 |
||
| CDS CAA 90 bp | TTTATAACCATTTACCCTGGCTCCAGAGCACAGACCTTCCTGCAGTaGGGCCGGCGCGTTGCGGCGTTGAGGAGCTGCGGCGCGCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FITIYPGSRAQTFLQ*GRRVAALRSCGAPL Trigger: GAGGGGCGCGCCGCAGCTCCTCAACGCCGCAACGCGCCGGCCCAACTGCAGGAAGGTCTGTGCTCTGGAGCCAGGGTAAATGGTTATAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616725.4 |
||
| CDS CAA 72 bp | GGTCCTCTGGATCACTATGTTGTAAAGTGCACTTGTTaGCCCACCTTTGGGCATTCGTTGTTACCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPLDHYVVKCTC*PTFGHSLLPLC Trigger: GCAGAGAGGTAACAACGAATGCCCAAAGGTGGGCAAACAAGTGCACTTTACAACATAGTGATCCAGAGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS CAA 90 bp | TGGTTTTGCGGTCCTCTGGATCACTATGTTGTAAAGTGCACTTGTTaGCCCACCTTTGGGCATTCGTTGTTACCTCTCTGCTCCATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WFCGPLDHYVVKCTC*PTFGHSLLPLCSIP Trigger: TGGAATGGAGCAGAGAGGTAACAACGAATGCCCAAAGGTGGGCAAACAAGTGCACTTTACAACATAGTGATCCAGAGGACCGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS CAA 90 bp | GTACTGGTTTTGCGGTCCTCTGGATCACTATGTTGTAAAGTGCACTaGTTTGCCCACCTTTGGGCATTCGTTGTTACCTCTCTGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VLVLRSSGSLCCKVH*FAHLWAFVVTSLLH Trigger: ATGGAGCAGAGAGGTAACAACGAATGCCCAAAGGTGGGCAAACAAGTGCACTTTACAACATAGTGATCCAGAGGACCGCAAAACCAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS CCA 72 bp | TCACTATGTTGTAAAGTGCACTTGTTTGCCCACCTTTaGGCATTCGTTGTTACCTCTCTGCTCCATTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLCCKVHLFAHL*AFVVTSLLHSI Trigger: GATGGAATGGAGCAGAGAGGTAACAACGAATGCCCAAAGGTGGGCAAACAAGTGCACTTTACAACATAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS TCA 72 bp | ACTGTGCTCTTTCTTGCAGGTGTTTTAAGATCAGGATaGCATGGTTTTCCTAGAGTGTCTTTAGGAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVLFLAGVLRSG*HGFPRVSLGGP Trigger: TGGCCCTCCTAAAGACACTCTAGGAAAACCATGTCATCCTGATCTTAAAACACCTGCAAGAAAGAGCACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||
| CDS TCA 72 bp | GTATTCTTCAAGGAATCACAGTTACTTAGGAGATCTTaGTACTGGCAACTATTGGTGCATAGTCCTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VFFKESQLLRRS*YWQLLVHSPLS Trigger: TGACAAAGGACTATGCACCAATAGTTGCCAGTATCAAGATCTCCTAAGTAACTGTGATTCCTTGAAGAATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339139.5 ENST00000616725.4 ENST00000618917.4 |
||