RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRIM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000150938

Ensembl transcript IDs: ENST00000280527.7, ENST00000413985.1, ENST00000426856.1, ENST00000428774.1, ENST00000473403.5, ENST00000477491.5, ENST00000481321.1, ENST00000497236.1, ENST00000613124.1, ENST00000619072.1, ENST00000619935.1

Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTaGGCGCGCACACACACACACACACACACACACATACATACTCTC +
Preference number: 1 (lower is better)
Translates to: TLLHSRCNADCSRRA*ARTHTHTHTHIHTL
Trigger: GAGAGTATGTATGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR CCA 90 bp GTGAGCTTCATCCAGAGTATGGCCCAGGCACCTCAGAATGAATGGTaGCACTCCTTTCCCTACTGTTGCATCTGGACCATTTGGGGGACC +
Preference number: 1 (lower is better)
Translates to: VSFIQSMAQAPQNEW*HSFPYCCIWTIWGT
Trigger: GGTCCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGATGAAGCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR CCA 90 bp GCTGTGAGCTTCATCCAGAGTATGGCCCAGGCACCTCAGAATGAATaGTGGCACTCCTTTCCCTACTGTTGCATCTGGACCATTTGGGGG +
Preference number: 1 (lower is better)
Translates to: AVSFIQSMAQAPQNE*WHSFPYCCIWTIWG
Trigger: CCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGATGAAGCTCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR TCA 90 bp AAAGAAACTTGTGGCTTTAGACCTGGGATGGCTGTCAAAGGGTTCTaGTGTGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGT +
Preference number: 1 (lower is better)
Translates to: KETCGFRPGMAVKGF*CARLVVLRWLWQLG
Trigger: ACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCACATCAGAACCCTTTGACAGCCATCCCAGGTCTAAAGCCACAAGTTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR TCA 90 bp GCCGCTATCGCATTTCTCTGGCTTCCTCACTGCCTACTGCAGTTGTaGCTGTATAGAAAAGAAACTTGTGGCTTTAGACCTGGGATGGCT +
Preference number: 1 (lower is better)
Translates to: AAIAFLWLPHCLLQL*LYRKETCGFRPGMA
Trigger: AGCCATCCCAGGTCTAAAGCCACAAGTTTCTTTTCTATACAGTCACAACTGCAGTAGGCAGTGAGGAAGCCAGAGAAATGCGATAGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR GCA 90 bp AAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTTAAGAAGACTCTaGCAGCAGTCTCCAGAGGGTTCTTATCAGGTGGGCCCTCTTGTG +
Preference number: 1 (lower is better)
Translates to: KMFYLVTVQVLLRRL*QQSPEGSYQVGPLV
Trigger: CACAAGAGGGCCCACCTGATAAGAACCCTCTGGAGACTGCTGGCAGAGTCTTCTTAACAGGACTTGGACTGTGACCAGATAAAACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
3UTR GCA 90 bp AACAGAACAAAGCAACAACAAACAGTGAAATATAGCCCCTGGAAATaGCTGGTGTTCGTCACCCTCTCCCTCCTCTTCCTGTCACGTTGT +
Preference number: 1 (lower is better)
Translates to: NRTKQQQTVKYSPWK*LVFVTLSLLFLSRC
Trigger: ACAACGTGACAGGAAGAGGAGGGAGAGGGTGACGAACACCAGGCATTTCCAGGGGCTATATTTCACTGTTTGTTGTTGCTTTGTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR GCA 90 bp AGAGAAATGCCGCTATCGCATTTCTCTGGCTTCCTCACTGCCTACTaGAGTTGTGACTGTATAGAAAAGAAACTTGTGGCTTTAGACCTG +
Preference number: 1 (lower is better)
Translates to: REMPLSHFSGFLTAY*SCDCIEKKLVALDL
Trigger: CAGGTCTAAAGCCACAAGTTTCTTTTCTATACAGTCACAACTGCAGTAGGCAGTGAGGAAGCCAGAGAAATGCGATAGCGGCATTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR GCA 90 bp AACCTTAACGTAGAAGCCATTGGACCTTCCAGATTGGCCAGTTTCTaGACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGT +
Preference number: 1 (lower is better)
Translates to: NLNVEAIGPSRLASF*TYRRCFIWSQSKSC
Trigger: ACAGGACTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGCCAATCTGGAAGGTCCAATGGCTTCTACGTTAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
3UTR TCA 90 bp CCACCAAGAGAACACAAGGACGTATACCCTTTAGTCTCTGTCATATaGAATGGCATCAGCATAAACTTTCAAATTAACTTCCTTAAGTTT +
Preference number: 1 (lower is better)
Translates to: PPREHKDVYPLVSVI*NGISINFQINFLKF
Trigger: AAACTTAAGGAAGTTAATTTGAAAGTTTATGCTGATGCCATTTCATATGACAGAGACTAAAGGGTATACGTCCTTGTGTTCTCTTGGTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCTATAGCCCCTGGAAATaGCTGGTGTTCGTCACCCTC +
Preference number: 2 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARYSPWK*LVFVTL
Trigger: GAGGGTGACGAACACCAGGCATTTCCAGGGGCTATA...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR GCA 90 bp GCTGTGAGCTTCATCCAGAGTATGGCCCAGGCACCTCAGAATGAATGGTGGCACTCCTTTCCCTACTGTTaGATCTGGACCATTTGGGGG +
Preference number: 2 (lower is better)
Translates to: AVSFIQSMAQAPQNEWWHSFPYC*IWTIWG
Trigger: CCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGA...GTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGATGAAGCTCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR-3UTR TCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCTCCCCGAGCCAAGCTaGCCAATTTTTCTTCCCAAC +
Preference number: 2 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFLPEPS*PIFLPN
Trigger: GTTGGGAAGAAAAATTGGTCAGCTTGGCTCGGGGAG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR TCA 90 bp GAAAACCTTAACGTAGAAGCCATTGGACCTTCCAGATTGGCCAGTTTCTGCACCAGGTGGGCCCTCTTGTaGTGGGGTCTTCCCCCATAT +
Preference number: 2 (lower is better)
Translates to: ENLNVEAIGPSRLASFCTRWALL*WGLPPY
Trigger: ATATGGGGGAAGACCCCATCACAAGAGGGCCCACCT...GGTGCAGAAACTGGCCAATCTGGAAGGTCCAATGGCTTCTACGTTAAGGTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413985.1
3UTR-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCAGCACTGCTATGGAATaGCTGTTTATCTGCCTTTGT +
Preference number: 2 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARSTAME*LFICLC
Trigger: ACAAAGGCAGATAAACAGGCATTCCATAGCAGTGCT...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR TCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCTGCCTACTGCAGTTGTaGCTGTATAGAAAAGAAACT +
Preference number: 2 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARCLLQL*LYRKET
Trigger: AGTTTCTTTTCTATACAGTCACAACTGCAGTAGGCA...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CCA 90 bp TTACCGCCTTACGTTAGAGCTGTGAGCTTCATCCAGAGTATGGCCCAGGCACCTTGCATCTGGACCATTTaGGGGACCATTTGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: LPPYVRAVSFIQSMAQAPCIWTI*GTICSS
Trigger: AGAGGAACAAATGGTCCCCCAAATGGTCCAGATGCA...AGGTGCCTGGGCCATACTCTGGATGAAGCTCACAGCTCTAACGTAAGGCGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR CAA 90 bp GCACTCCTTTCCCTACTGTTGCATCTGGACCATTTGGGGGACCATTaGTTCCTCTTTGAGATGAGCAGTAATGCTGAGAGCAGCCTCAAA +
Preference number: 2 (lower is better)
Translates to: ALLSLLLHLDHLGDH*FLFEMSSNAESSLK
Trigger: TTTGAGGCTGCTCTCAGCATTACTGCTCATCTCAAAGAGGAACAAATGGTCCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR-3UTR TCA 90 bp ATGAATGGTGGCACTCCTTTCCCTACTGTTGCATCTGGACCATTTGGGGGACCATGTTCCTCTTTGAGATaGGCAGTAATGCTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: MNGGTPFPTVASGPFGGPCSSLR*AVMLRA
Trigger: TGCTCTCAGCATTACTGCTCATCTCAAAGAGGAACA...TGGTCCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR-3UTR GCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTGAGGAAAAGTGGGAATaGTTGTTCTGCACATTGCTG +
Preference number: 2 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFEEKWE*LFCTLL
Trigger: CAGCAATGTGCAGAACAAGCATTCCCACTTTTCCTC...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGCCCCTGGAAATGCCTaGTGTTCGTCACCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVAPGNA*CSSPSP
Trigger: GGGAGAGGGTGACGAACACCAGGCATTTCCAGGGGC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR TCA 90 bp AGAACACAAGGACGTATACCCTTTAGTCTCTGTCATATGAAATGGCATCAGCATCCAGGCACCTCAGAATaGATGGTGGCACTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: RTQGRIPFSLCHMKWHQHPGTSE*MVALLS
Trigger: GGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGG...ATGCTGATGCCATTTCATATGACAGAGACTAAAGGGTATACGTCCTTGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR-3UTR TCA 90 bp TTGGCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCCCTTCCCCCATATCCTTaGCCACTAGAGGGTACAAAA +
Preference number: 2 (lower is better)
Translates to: LASFCTYRRCFIWSQSKSLPPYP*PLEGTK
Trigger: TTTTGTACCCTCTAGTGGTCAAGGATATGGGGGAAG...GGACTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413985.1
3UTR-3UTR GCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAAGGTGCAATGCTGACTaGTCAAGGCGTGCGTGCGCG +
Preference number: 2 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGRCNAD*SRRACA
Trigger: CGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCT...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGTTCTAAGGTGGTTATaGCAGCTGGGTCGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVVLRWL*QLGRKA
Trigger: GGCCTTGCGACCCAGCTGCCATAACCACCTTAGAAC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACTGGTAGTTCTAAGGTaGTTATGGCAGCTGGGTCGC +
Preference number: 2 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVELVVLR*LWQLGR
Trigger: GCGACCCAGCTGCCATAACCACCTTAGAACTACCAG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR TCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGACTGCTCATTCAGGCCTaGGCTTTGCAGCAACCAGTG +
Preference number: 2 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGLLIQA*ALQQPV
Trigger: CACTGGTTGCTGCAAAGCTCAGGCCTGAATGAGCAG...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAATTCAGGCCTGAGCTTTaGAGCAACCAGTGCAGTCTT +
Preference number: 2 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEFRPEL*SNQCSL
Trigger: AAGACTGCACTGGTTGCTGCAAAGCTCAGGCCTGAA...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGCTATCGCATTTCTCTaGCTTCCTCACTGCCTACTG +
Preference number: 2 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVAIAFL*LPHCLL
Trigger: CAGTAGGCAGTGAGGAAGCCAGAGAAATGCGATAGC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGCTTTAGACCTGGGATaGCTGTCAAAGGGTTCTGAT +
Preference number: 2 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVALDLG*LSKGSD
Trigger: ATCAGAACCCTTTGACAGCCATCCCAGGTCTAAAGC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGACTCTGCTAGGAACTaGCTGATTGATTGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVDSARN*LIDWLG
Trigger: TCCAAGCCAATCAATCAGCCAGTTCCTAGCAGAGTC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR GCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAGCTTGTTCTGCACATTaGTGTAGACAGAGCCCATCC +
Preference number: 2 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGACSAH*CRQSPS
Trigger: GGATGGGCTCTGTCTACAGCAATGTGCAGAACAAGC...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAATCTGGGCCACTGAACTaGTTTTATGTTACCAGGTTT +
Preference number: 2 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVESGPLN*FYVTRF
Trigger: AAACCTGGTAACATAAAAGCAGTTCAGTGGCCCAGA...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR TCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAAGCAACAACAAACAGTaGAATATAGCCCCTGGAAAT +
Preference number: 2 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVESNNKQ*NIAPGN
Trigger: ATTTCCAGGGGCTATATTTCACTGTTTGTTGTTGCT...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR TCA 72 bp GAGCTTCATCCAGAGTATGGCCCAGGCACCTCAGAATaGATGGTGGCACTCCTTTCCCTACTGTTGCATCTG +
Preference number: 3 (lower is better)
Translates to: ELHPEYGPGTSE*MVALLSLLLHL
Trigger: CAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGATGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR CCA 72 bp TTCATCCAGAGTATGGCCCAGGCACCTCAGAATGAATaGTGGCACTCCTTTCCCTACTGTTGCATCTGGACC +
Preference number: 3 (lower is better)
Translates to: FIQSMAQAPQNE*WHSFPYCCIWT
Trigger: GGTCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR-3UTR CAA 90 bp GCTTCATCCAGAGTATGGCCCAGGCACCTCAGAATGAATGGTGGCACTCCTTTCCATTTGGGGGACCATTaGTTCCTCTTTGAGATGAGC +
Preference number: 3 (lower is better)
Translates to: ASSRVWPRHLRMNGGTPFHLGDH*FLFEMS
Trigger: GCTCATCTCAAAGAGGAACAAATGGTCCCCCAAATG...GAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGATGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR CCA 72 bp ATCCAGAGTATGGCCCAGGCACCTCAGAATGAATGGTaGCACTCCTTTCCCTACTGTTGCATCTGGACCATT +
Preference number: 3 (lower is better)
Translates to: IQSMAQAPQNEW*HSFPYCCIWTI
Trigger: AATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR GCA 72 bp CCTCAGAATGAATGGTGGCACTCCTTTCCCTACTGTTaGATCTGGACCATTTGGGGGACCATTTGTTCCTCT +
Preference number: 3 (lower is better)
Translates to: PQNEWWHSFPYC*IWTIWGTICSS
Trigger: AGAGGAACAAATGGTCCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR-3UTR CAA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCACTTGGTCAGTTATCTaGAGGAAAAGTGGGAATGCT +
Preference number: 3 (lower is better)
Translates to: WATELLLCYQVSPRAKLTTWSVI*RKSGNA
Trigger: AGCATTCCCACTTTTCCTCAAGATAACTGACCAAGT...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR CCA 72 bp AGAACAAAGCAACAACAAACAGTGAAATATAGCCCCTaGAAATGCCTGGTGTTCGTCACCCTCTCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: RTKQQQTVKYSP*KCLVFVTLSLL
Trigger: GAGGAGGGAGAGGGTGACGAACACCAGGCATTTCCAGGGGCTATATTTCACTGTTTGTTGTTGCTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR CCA 72 bp AATGAATGGTGGCACTCCTTTCCCTACTGTTGCATCTaGACCATTTGGGGGACCATTTGTTCCTCTTTGAGA +
Preference number: 3 (lower is better)
Translates to: NEWWHSFPYCCI*TIWGTICSSLR
Trigger: TCTCAAAGAGGAACAAATGGTCCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR GCA 72 bp GTAGAAGCCATTGGACCTTCCAGATTGGCCAGTTTCTaGACCTATAGAAGATGTTTTATCTGGTCACAGTCC +
Preference number: 3 (lower is better)
Translates to: VEAIGPSRLASF*TYRRCFIWSQS
Trigger: GGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGCCAATCTGGAAGGTCCAATGGCTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
3UTR TCA 72 bp GCATTTCTCTGGCTTCCTCACTGCCTACTGCAGTTGTaGCTGTATAGAAAAGAAACTTGTGGCTTTAGACCT +
Preference number: 3 (lower is better)
Translates to: AFLWLPHCLLQL*LYRKETCGFRP
Trigger: AGGTCTAAAGCCACAAGTTTCTTTTCTATACAGTCACAACTGCAGTAGGCAGTGAGGAAGCCAGAGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CAA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAGTCGCAAGGCCTTTTTaGTTTCCTGCTCATTCAGGC +
Preference number: 3 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGVARPF*FPAHSG
Trigger: GCCTGAATGAGCAGGAAACAAAAAAGGCCTTGCGAC...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CAA 90 bp AACTCCCATCTTCTGCAAATTTTAATCTCTAGCTTGATGTCTTTTGTTAGCCAATTGCATCTGGACCATTaGGGGGACCATTTGTTCCTC +
Preference number: 3 (lower is better)
Translates to: NSHLLQILISSLMSFVSQLHLDH*GDHLFL
Trigger: GAGGAACAAATGGTCCCCCAAATGGTCCAGATGCAA...TTGGCTAACAAAAGACATCAAGCTAGAGATTAAAATTTGCAGAAGATGGGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR-3UTR CAA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAGTCGTCTTCCGTCTTTaGAAACCTCATCCTAGTTGC +
Preference number: 3 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGVVFRL*KPHPSC
Trigger: GCAACTAGGATGAGGTTTCAAAAGACGGAAGACGAC...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR TCA 72 bp AACTTTGGTTCTAAGAAAACACTTGGTCAGTTATCTTaGGGAAAAGTGGGAATGCTTGTTCTGCACATTGCT +
Preference number: 3 (lower is better)
Translates to: NFGSKKTLGQLS*GKVGMLVLHIA
Trigger: AGCAATGTGCAGAACAAGCATTCCCACTTTTCCTCAAGATAACTGACCAAGTGTTTTCTTAGAACCAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR-3UTR CAA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGTTCTAAGAAAACACTaGGTCAGTTATCTTGAGGAA +
Preference number: 3 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVVLRKH*VSYLEE
Trigger: TTCCTCAAGATAACTGACCAAGTGTTTTCTTAGAAC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR TCA 72 bp GAACACAAGGACGTATACCCTTTAGTCTCTGTCATATaGAATGGCATCAGCATAAACTTTCAAATTAACTTC +
Preference number: 3 (lower is better)
Translates to: EHKDVYPLVSVI*NGISINFQINF
Trigger: GAAGTTAATTTGAAAGTTTATGCTGATGCCATTTCATATGACAGAGACTAAAGGGTATACGTCCTTGTGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCCAGCCGCAGACGCCCTaGACGATGCTCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARQPQTP*TMLPGQ
Trigger: CTGCCCGGGGAGCATCGTGCAGGGCGTCTGCGGCTG...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCAGACCAGCGCCCGGGTaGCGGAGCGCGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTRPAPG*RSAPAA
Trigger: TGCTGCTGGCGCGCTCCGGCACCCGGGCGCTGGTCT...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCTGCACACGCAGCGGCTaGGTAAGGGACAGCACTCCC +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARCTRSG*VRDSTP
Trigger: GGGAGTGCTGTCCCTTACCCAGCCGCTGCGTGTGCA...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCCAGCACTGTCCAGGGTaGATGGTGGGGTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARQHCPG*MVGLPQ
Trigger: CTGTGGCAACCCCACCATTCACCCTGGACAGTGCTG...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTAGCGAGACCAGGAGGTaGCCGCAGCCGGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFSETRR*PQPANP
Trigger: GGGGTTGGCCGGCTGCGGGCACCTCCTGGTCTCGCT...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCCGTAAATCCCGAAGGTaGCGCCGCAGCTCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARRKSRR*RRSSRS
Trigger: GGAACGAGAGCTGCGGCGGCACCTTCGGGATTTACG...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCGGCAGTAGCAGTGGGTaGAGCTGTCAAGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARGSSSG*SCQGPT
Trigger: GGTGGGACCTTGACAGCTGCACCCACTGCTACTGCC...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTCCCGAGCTGCCGAGTaGGCGCGGTGGCGCAGCACA +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFSRAAE*ARWRST
Trigger: TGTGCTGCGCCACCGCGCCCACTCGGCAGCTCGGGA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCCTGGCAGAGCAGCGGTaGGCACACCTCTGTCTCACA +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARLAEQR*AHLCLT
Trigger: TGTGAGACAGAGGTGTGCCCACCGCTGCTCTGCCAG...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCAGACGCCCTGCACGATaGTCCCCGGGCAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTRRPAR*SPGSSW
Trigger: CCAGGAACTGCCCGGGGAGCATCGTGCAGGGCGTCT...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCAGCAGGAATCCTGGGTaGGTGAGGGGTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARSRNPG*VRGSGR
Trigger: TCTGCCAGAACCCCTCACGCACCCAGGATTCCTGCT...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCTTCAACCCAAACTTCTaGCGCGGCGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTFNPNF*RGGGGG
Trigger: GCCACCGCCGCCGCCGCGCCAGAAGTTTGGGTTGAA...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCTCTCCTCCAGGGGCGTaGCAAATGGAGGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARSPPGA*QMEGVL
Trigger: CAGTACTCCCTCCATTTGCCACGCCCCTGGAGGAGA...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TCTTATCAGGTGGGCCCTCTTGTGATGGGGTCTTCCCCCATATCCTTGACCACTGTGCGTGAGGGGTTCTaGCAGAGCAGCGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SYQVGPLVMGSSPISLTTVREGF*QSSGGH
Trigger: GTGCCCACCGCTGCTCTGCCAGAACCCCTCACGCAC...AGTGGTCAAGGATATGGGGGAAGACCCCATCACAAGAGGGCCCACCTGATAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCTGGATCTTCACACACTaGGCAGCACTCTCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARWIFTH*AALSFG
Trigger: CCCGAAGGAGAGTGCTGCCCAGTGTGTGAAGATCCA...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGGACACGCGGTCTGCTaGACAGGAGGGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTGHAVC*TGGHST
Trigger: TGTGGAATGCCCTCCTGTTCAGCAGACCGCGTGTCC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp GGCCCTCTTGTGATGGGGTCTTCCCCCATATCCTTGACCACTAGAGGGTACAAACAGCACTGTCCAGGGTaGATGGTGGGGTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GPLVMGSSPISLTTRGYKQHCPG*MVGLPQ
Trigger: CTGTGGCAACCCCACCATTCACCCTGGACAGTGCTG...TTTGTACCCTCTAGTGGTCAAGGATATGGGGGAAGACCCCATCACAAGAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR TCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTGGAATCCTGGGTGCGTaGGGGGTTCTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFGILGA*GVLAEQ
Trigger: CTGCTCTGCCAGAACCCCTCACGCACCCAGGATTCC...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CCGCCTTACGTTAGAGCTGTGAGCTTCATCCAGAGTATGGCCCAGGCACCTCAGCCAGGCACCTCAGAATaGATGGTGGCACTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: PPYVRAVSFIQSMAQAPQPGTSE*MVALLS
Trigger: GGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGG...CTGAGGTGCCTGGGCCATACTCTGGATGAAGCTCACAGCTCTAACGTAAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR GCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTTTGCGCAGACAGCCTaGGGGGTTGCACACGCAGCG +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFFAQTA*GVAHAA
Trigger: CGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
57% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTGGGCTCCTCGCACTTaGACTCGTCACAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFWAPRT*TRHRAG
Trigger: GCCTGCCCTGTGACGAGTCCAAGTGCGAGGAGCCCA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp GGCCCTCTTGTGATGGGGTCTTCCCCCATATCCTTGACCACTAGAGGGTACAAACTGGCAGAGCAGCGGTaGGCACACCTCTGTCTCACA +
Preference number: 4 (lower is better)
Translates to: GPLVMGSSPISLTTRGYKLAEQR*AHLCLT
Trigger: TGTGAGACAGAGGTGTGCCCACCGCTGCTCTGCCAG...TTTGTACCCTCTAGTGGTCAAGGATATGGGGGAAGACCCCATCACAAGAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCGCCTTCCCACTGAAGTaGCACACCACCTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARAFPLK*HTTFFG
Trigger: TCCAAAGAAGGTGGTGTGCCACTTCAGTGGGAAGGC...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGCCCCTGGAAATGCCTaGTGTTCGTCACCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTAPGNA*CSSPSP
Trigger: GGGAGAGGGTGACGAACACCAGGCATTTCCAGGGGC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGCCAGCAGTCTCCAGAGGGTTCTTATCAGGTGGGCCCTCTTGTGATGGGGTCTAGGTTTGGCCTCCTATaGAGTAGGGACAACACTGGC +
Preference number: 4 (lower is better)
Translates to: CQQSPEGSYQVGPLVMGSRFGLL*SRDNTG
Trigger: GCCAGTGTTGTCCCTACTGCATAGGAGGCCAAACCT...AGACCCCATCACAAGAGGGCCCACCTGATAAGAACCCTCTGGAGACTGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCAGACTATGCGGGGAGTaGATCCCACCTCACACACGG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTRLCGE*IPPHTR
Trigger: CCGTGTGTGAGGTGGGATCCACTCCCCGCATAGTCT...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTAAGTGCCCGACAGGATaGGTGGCCCAGCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFKCPTG*VAQLKQ
Trigger: CTGCTTCAGCTGGGCCACCCATCCTGTCGGGCACTT...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCCTTTCACAGGGTTTGTaGAGGTCTGTCCGCAGACGG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTLSQGL*RSVRRR
Trigger: CCGTCTGCGGACAGACCTGCACAAACCCTGTGAAAG...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTACTGTCCAGGGTGAATaGTGGGGTTGCCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFTVQGE*WGCHRQ
Trigger: CTGCCTGTGGCAACCCCACCATTCACCCTGGACAGT...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCACATTTCCCGTCCATTaGGACAGTAGCATTCCCGGC +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTTFPVH*DSSIPG
Trigger: GCCGGGAATGCTACTGTCTCAATGGACGGGAAATGT...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCAAAGTCATCTGCACATaGTGGGCAGCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTKVICT*WAALSR
Trigger: CCTGGACAGTGCTGCCCATCATGTGCAGATGACTTT...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp GGCCCTCTTGTGATGGGGTCTTCCCCCATATCCTTGACCACTAGAGGGTACAAAAAATGGAGGGAGTACTaGGCTCTGGCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GPLVMGSSPISLTTRGYKKWREY*ALASAP
Trigger: TGGTGCAGAAGCCAGAGCTCAGTACTCCCTCCATTT...TTTGTACCCTCTAGTGGTCAAGGATATGGGGGAAGACCCCATCACAAGAGGGCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR TCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCCTGTGGCAGGTGCACTaGGTACAGGAGTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTLWQVH*VQESMF
Trigger: GAACATTGACTCCTGTACTCAGTGCACCTGCCACAG...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp AGAGGGTTCTTATCAGGTGGGCCCTCTTGTGATGGGGTCTTCCCCCATATCCTTCTGTGGCAGGTGCACTaGGTACAGGAGTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: RGFLSGGPSCDGVFPHILLWQVH*VQESMF
Trigger: GAACATTGACTCCTGTACTCAGTGCACCTGCCACAG...AAGGATATGGGGGAAGACCCCATCACAAGAGGGCCCACCTGATAAGAACCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCACTCAAAGGGATTGCTaGAGGTTCGAATGGTGTTAC +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARTQRDC*RFEWCY
Trigger: GTAACACCATTCGAACCTGCAGCAATCCCTTTGAGT...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCCAGATGTCACAGCCGTaGTTATTCTTCAGCAATCCA +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARQMSQP*LFFSNP
Trigger: TGGATTGCTGAAGAATAAGCACGGCTGTGACATCTG...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTGTCCGCTGTGGCAGGTaGACTGAGTACAGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFVRCGR*TEYRSQ
Trigger: TTGACTCCTGTACTCAGTGCACCTGCCACAGCGGAC...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCCTCTGGTTCCTTTCTTaGAGTCCACAGATACTAGCT +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARLWFLS*SPQILA
Trigger: AGCTAGTATCTGTGGACTGCAAGAAAGGAACCAGAG...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCGATGCAGATAAGAACTaGCATCAATGTCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARDADKN*HQCLWP
Trigger: TGGCCAGAGACATTGATGGCAGTTCTTATCTGCATC...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACGAGCCCACGAGCCTTaGCGCCGGCGGCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVERAHEP*RRRQLP
Trigger: GGGAAGCTGCCGCCGGCGCCAAGGCTCGTGGGCTCG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCAACGTGGAGAGAACTaGACTTCACAGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFQRGEN*TSQRAL
Trigger: CAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CCCAGGCACCTCAGAATGAATGGTGGCACTCCTTTCCCTACTGTTGCATCTGGAGCTTCATCCAGAGTATaGCCCAGGCACCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: PRHLRMNGGTPFPTVASGASSRV*PRHLRM
Trigger: CATTCTGAGGTGCCTGGGCCATACTCTGGATGAAGC...TCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR TCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATCACCACACTGGGCGGTaGAGCAGATGGCAACGCCCC +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYHHTGR*SRWQRP
Trigger: GGGGCGTTGCCATCTGCTTCACCGCCCAGTGTGGTG...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCTCGGTGTTTATGCACTaGCAGGTCCGACAACCATTG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTSVFMH*QVRQPL
Trigger: CAATGGTTGTCGGACCTGTCAGTGCATAAACACCGA...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp GAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTTAAGAAGACTCTGCCAGCAGGAATCCTGGGTGCGTaGGGGGTTCTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: EDVLSGHSPSPVKKTLPAGILGA*GVLAEQ
Trigger: CTGCTCTGCCAGAACCCCTCACGCACCCAGGATTCC...TGCTGGCAGAGTCTTCTTAACAGGACTTGGACTGTGACCAGATAAAACATCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR TCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGGCAATGGAGTCCAGTaGAGAATCTTCACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTGNGVQ*RIFTWV
Trigger: CACCCAAGTGAAGATTCTTCACTGGACTCCATTGCC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATCCGGCTGGCAGACTTTaGGCAGACAGCCTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYPAGRL*ADSLRG
Trigger: ACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGG...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGTTCCTCGGTGTTTATaGACTGACAGGTCCGACAAC +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTVPRCL*TDRSDN
Trigger: GTTGTCGGACCTGTCAGTGCATAAACACCGAGGAAC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTCCCGGCACCCATCGTaGCAGCTCTCCTCATTTTTA +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFSRHPS*QLSSFL
Trigger: TAAAAATGAGGAGAGCTGGCACGATGGGTGCCGGGA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TCTTATCAGGTGGGCCCTCTTGTGATGGGGTCTTCCCCCATATCCTTGACCACTCTGTTAAGAAGACTCTaGCAGCAGTCTCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SYQVGPLVMGSSPISLTTLLRRL*QQSPEG
Trigger: ACCCTCTGGAGACTGCTGGCAGAGTCTTCTTAACAG...AGTGGTCAAGGATATGGGGGAAGACCCCATCACAAGAGGGCCCACCTGATAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR GCA 90 bp GCTTCATCCAGAGTATGGCCCAGGCACCTCAGAATGAATGGTGGCACTCCTTTCTCCTTTCCCTACTGTTaGATCTGGACCATTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ASSRVWPRHLRMNGGTPFSFPYC*IWTIWG
Trigger: CCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGA...GAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGATGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCTTCACAGCGGGCCTTaGAGCAATCTGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFLHSGP*SNLASL
Trigger: AAGAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTCACCGTTGACGCACTaGCAGAATGTGCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFSPLTH*QNVQSS
Trigger: AGACGACTGCACATTCTGCCAGTGCGTCAACGGTGA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp GCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTGGGCAGCAGGAATCCTaGGTGCGTGAGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ASFCTYRRCFIWSQSKSCGQQES*VREGFW
Trigger: CCAGAACCCCTCACGCACCCAGGATTCCTGCTGCCC...ACAGGACTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR TCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCTGCTGTAGAAGCCACTaGATCTTGCATCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTCCRSH*ILHLVL
Trigger: CAGAACCAGATGCAAGATTCAGTGGCTTCTACAGCA...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp GAAAACCTTAACGTAGAAGCCATTGGACCTTCCAGATTGGCCAGTTTCTGCACCGTCCGCTGTGGCAGGTaGACTGAGTACAGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: ENLNVEAIGPSRLASFCTVRCGR*TEYRSQ
Trigger: TTGACTCCTGTACTCAGTGCACCTGCCACAGCGGAC...GGTGCAGAAACTGGCCAATCTGGAAGGTCCAATGGCTTCTACGTTAAGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR GCA 90 bp AACCTTAACGTAGAAGCCATTGGACCTTCCAGATTGGCCAGTTTCTGCACCTATAGCAGGAATCCTGGGTaGGTGAGGGGTTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: NLNVEAIGPSRLASFCTYSRNPG*VRGSGR
Trigger: TCTGCCAGAACCCCTCACGCACCCAGGATTCCTGCT...ATAGGTGCAGAAACTGGCCAATCTGGAAGGTCCAATGGCTTCTACGTTAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR GCA 90 bp AGAGGGTTCTTATCAGGTGGGCCCTCTTGTGATGGGGTCTTCCCCCATATCCTTCGCTATCAATGCAGATaGAGCTGGTACAAACGTCAG +
Preference number: 4 (lower is better)
Translates to: RGFLSGGPSCDGVFPHILRYQCR*SWYKRQ
Trigger: CTGACGTTTGTACCAGCTGCATCTGCATTGATAGCG...AAGGATATGGGGGAAGACCCCATCACAAGAGGGCCCACCTGATAAGAACCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR GCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTTCAGGCCTGAGCTTTaGAGCAACCAGTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFFRPEL*SNQCSL
Trigger: AAGACTGCACTGGTTGCTGCAAAGCTCAGGCCTGAA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATCGCCACCGGTCTCCGTaGGCAAGGATCAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYRHRSP*ARIRPL
Trigger: CAATGGCCTGATCCTTGCCCACGGAGACCGGTGGCG...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCTCCCCACATGCAGGTaGATCAACTGTGATGATGGT +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFLPTCR*INCDDG
Trigger: ACCATCATCACAGTTGATCCACCTGCATGTGGGGAG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCCTTCAGCAATCCAAGTaGACAATACTTGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARLQQSK*TILVTD
Trigger: ATCTGTGACAAGTATTGTCCACTTGGATTGCTGAAG...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCAATGCAGATGCAGCTaGTACAAACGTCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFQCRCS*YKRQAS
Trigger: GGAAGCCTGACGTTTGTACCAGCTGCATCTGCATTG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTGCTATCGCATTTCTCTaGCTTCCTCACTGCCTACTG +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFAIAFL*LPHCLL
Trigger: CAGTAGGCAGTGAGGAAGCCAGAGAAATGCGATAGC...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp GCTTCATCCAGAGTATGGCCCAGGCACCTCAGAATGAATGGTGGCACTCCTTTCTGCATCTGGACCATTTaGGGGACCATTTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ASSRVWPRHLRMNGGTPFCIWTI*GTICSS
Trigger: AGAGGAACAAATGGTCCCCCAAATGGTCCAGATGCA...GAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR CCA 90 bp GTGGCACTCCTTTCCCTACTGTTGCATCTGGACCATTTGGGGGACCATTTGTTCCCCTACTGTTGCATCTaGACCATTTGGGGGACCATT +
Preference number: 4 (lower is better)
Translates to: VALLSLLLHLDHLGDHLFPYCCI*TIWGTI
Trigger: AATGGTCCCCCAAATGGTCCAGATGCAACAGTAGGG...GAACAAATGGTCCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR CCA 90 bp AGAGTATGGCCCAGGCACCTCAGAATGAATGGTGGCACTCCTTTCCCTACTGTTGCACCTCAGAATGAATaGTGGCACTCCTTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: RVWPRHLRMNGGTPFPTVAPQNE*WHSFPY
Trigger: GTAGGGAAAGGAGTGCCACCATTCATTCTGAGGTGC...AACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGGCCATACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR TCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGAAAGGCACATATCCTaGCTTGGAAACTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTERHIS*LGNSKG
Trigger: TCCCTTTGAGTTTCCAAGTCAGGATATGTGCCTTTC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp GCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTAGGTGGGCCCTCTTGTaGTGGGGTCTTCCCCCATAT +
Preference number: 4 (lower is better)
Translates to: ASFCTYRRCFIWSQSKSCRWALL*WGLPPY
Trigger: ATATGGGGGAAGACCCCATCACAAGAGGGCCCACCT...ACAGGACTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR GCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGACAGCCTGCGGGGTTaGACACGCAGCGGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVDSLRG*TRSGWV
Trigger: TACCCAGCCGCTGCGTGTGCAACCCCGCAGGCTGTC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCGCTATCAATGCAGATaGAGCTGGTACAAACGTCAG +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFRYQCR*SWYKRQ
Trigger: CTGACGTTTGTACCAGCTGCATCTGCATTGATAGCG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCCCGCTTTAGAGAAATaGCGCTATCGCATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFPALEK*RYRISL
Trigger: CAGAGAAATGCGATAGCGGCATTTCTCTAAAGCGGG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATAGGTGCAATGCTGACTaGTCAAGGCGTGCGTGCGCG +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYRCNAD*SRRACA
Trigger: CGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCT...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTAACTGTGATGATGGTTaGTTCTTCGCACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFNCDDG*FFAHRA
Trigger: TGCCCTGTGTGCGAAGAACCAACCATCATCACAGTT...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCCAGATCTCACAGTTTTaGGCATCAGTAAGGAAACCG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTQISQF*ASVRKP
Trigger: CGGTTTCCTTACTGATGCCCAAAACTGTGAGATCTG...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TTGGCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCCACTGTCCAGGGTGAATaGTGGGGTTGCCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LASFCTYRRCFIWSQSKSTVQGE*WGCHRQ
Trigger: CTGCCTGTGGCAACCCCACCATTCACCCTGGACAGT...GGACTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGTGCGTGAGGGGTTCTaGCAGAGCAGCGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVVREGF*QSSGGH
Trigger: GTGCCCACCGCTGCTCTGCCAGAACCCCTCACGCAC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCATTTCTGGACACATTaGGCAGCAACTTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFHFWTH*AATSFH
Trigger: GTGGAAGGAAGTTGCTGCCCAATGTGTCCAGAAATG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGGAAGAAGGCTTAGTTaGTGTTCGATACCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTGRRLS*CSIPAK
Trigger: CTTTGCTGGTATCGAACACCAACTAAGCCTTCTTCC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTGACTCTGCTAGGAACTaGCTGATTGATTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFDSARN*LIDWLG
Trigger: TCCAAGCCAATCAATCAGCCAGTTCCTAGCAGAGTC...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TTCTTATCAGGTGGGCCCTCTTGTGATGGGGTCTTCCCCCATATCCTTGACCACTTGGACCTTCCAGATTaGCCAGTTTCTGCACCTATA +
Preference number: 4 (lower is better)
Translates to: FLSGGPSCDGVFPHILDHLDLPD*PVSAPI
Trigger: TATAGGTGCAGAAACTGGCCAATCTGGAAGGTCCAA...GTGGTCAAGGATATGGGGGAAGACCCCATCACAAGAGGGCCCACCTGATAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CCA 90 bp GTGGCACTCCTTTCCCTACTGTTGCATCTGGACCATTTGGGGGACCATTTGTTCCCTCAGAATGAATGGTaGCACTCCTTTCCCTACTGT +
Preference number: 4 (lower is better)
Translates to: VALLSLLLHLDHLGDHLFPQNEW*HSFPYC
Trigger: ACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGG...GAACAAATGGTCCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
3UTR CAA 72 bp GTGGCACTCCTTTCCCTACTGTTGCATCTGGACCATTaGGGGGACCATTTGTTCCTCTTTGAGATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VALLSLLLHLDH*GDHLFLFEMSS
Trigger: ACTGCTCATCTCAAAGAGGAACAAATGGTCCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR TCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATAGTGGCGTTCACCGTTaGCGCACTGGCAGAATGTGC +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYSGVHR*RTGRMC
Trigger: GCACATTCTGCCAGTGCGTCAACGGTGAACGCCACT...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTGTCCGACAACCATTGTaGTCGCGTTTGAAACCATTA +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFVRQPL*SRLKPL
Trigger: TAATGGTTTCAAACGCGATCACAATGGTTGTCGGAC...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATGATGACCATCCACGGTaGGACAAGTGCCCGACAGGA +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYDDHPR*DKCPTG
Trigger: TCCTGTCGGGCACTTGTCTCACCGTGGATGGTCATC...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CCGCCTTACGTTAGAGCTGTGAGCTTCATCCAGAGTATGGCCCAGGCACCTCAGTTAGTCTCTGTCATATaGAATGGCATCAGCATAAAC +
Preference number: 4 (lower is better)
Translates to: PPYVRAVSFIQSMAQAPQLVSVI*NGISIN
Trigger: GTTTATGCTGATGCCATTTCATATGACAGAGACTAA...CTGAGGTGCCTGGGCCATACTCTGGATGAAGCTCACAGCTCTAACGTAAGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR CCA 90 bp AGATTGGCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCTCCTCCAGGGGCGTaGCAAATGGAGGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: RLASFCTYRRCFIWSQSKSPPGA*QMEGVL
Trigger: CAGTACTCCCTCCATTTGCCACGCCCCTGGAGGAGA...CTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGCCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAGGGCAGCAGGAATCCTaGGTGCGTGAGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEGQQES*VREGFW
Trigger: CCAGAACCCCTCACGCACCCAGGATTCCTGCTGCCC...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGCACACCACCTTCTTTaGAATTGTGTCTTCTATGCA +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTAHHLL*NCVFYA
Trigger: TGCATAGAAGACACAATTCCAAAGAAGGTGGTGTGC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTGGGACATACATTTCTaGACACATTGGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFWDIHF*THWAAT
Trigger: AGTTGCTGCCCAATGTGTCCAGAAATGTATGTCCCA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCATACCAGCAAAGCAGTaGTATCCACTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTIPAKQ*YPLFLL
Trigger: CAGAAGAAACAGTGGATACCACTGCTTTGCTGGTAT...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
3UTR CAA 72 bp TCCCTACTGTTGCATCTGGACCATTTGGGGGACCATTaGTTCCTCTTTGAGATGAGCAGTAATGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SLLLHLDHLGDH*FLFEMSSNAES
Trigger: GCTCTCAGCATTACTGCTCATCTCAAAGAGGAACAAATGGTCCCCCAAATGGTCCAGATGCAACAGTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR TCA 90 bp GCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTAAAGTCATCTGCACATaGTGGGCAGCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASFCTYRRCFIWSQSKSCKVICT*WAALSR
Trigger: CCTGGACAGTGCTGCCCATCATGTGCAGATGACTTT...ACAGGACTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR TCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCAAACTGTAGAACTATaGTGCACTCCAAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFQTVEL*CTPSAI
Trigger: TATGGCACTTGGAGTGCATCATAGTTCTACAGTTTG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CTGGACCATTTGGGGGACCATTTGTTCCTCTTTGAGATGAGCAGTAATGCTGAGCTTACGTTAGAGCTGTaGGCTTCATCCAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: LDHLGDHLFLFEMSSNAELTLEL*ASSRVW
Trigger: CCATACTCTGGATGAAGCTCACAGCTCTAACGTAAG...CTCAGCATTACTGCTCATCTCAAAGAGGAACAAATGGTCCCCCAAATGGTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACGCCACGAGAGACTATaGGGGGAGTGGATCCCACCT +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVERHERL*GEWIPP
Trigger: AGGTGGGATCCACTCCCCGCATAGTCTCTCGTGGCG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACGCACTGGCAGAATGTaGAGTCGTCTTCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVERTGRM*SRLPAT
Trigger: GGTGGCGGGAAGACGACTGCACATTCTGCCAGTGCG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTCTGGGCCACTGAACTaGTTTTATGTTACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFSGPLN*FYVTRF
Trigger: AAACCTGGTAACATAAAAGCAGTTCAGTGGCCCAGA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTATCTCGTTCCTCTGGCTaGCGCACGTGTAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVSRSSG*RTCSSS
Trigger: GCTGCTGCTACACGTGCGCCAGCCAGAGGAACGAGA...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCTTAAAACCAAGCAGTTaGTCATCAGTCCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTLKPSS*SSVQFS
Trigger: TGAGAACTGGACTGATGACCAACTGCTTGGTTTTAA...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATCAAGGATCAGGCCATTaGCATAGCAGCCAGCGGGAT +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYQGSGH*HSSQRD
Trigger: ATCCCGCTGGCTGCTATGCCAATGGCCTGATCCTTG...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAACGGTCGCAACGCAGTaGCGTTCACCGTTGACGCAC +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVTVATQ*RSPLTH
Trigger: GTGCGTCAACGGTGAACGCCACTGCGTTGCGACCGT...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATGTTCTAAGGTGGTTATaGCAGCTGGGTCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYVLRWL*QLGRKA
Trigger: GGCCTTGCGACCCAGCTGCCATAACCACCTTAGAAC...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAGATGGGTGGCCCAGCTaGAGCAGAGGCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGDGWPS*SRGLSA
Trigger: TGCAGAGAGGCCTCTGCTTCAGCTGGGCCACCCATC...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATAACTTCCTTCCACGTTaGTGGGCTCAACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYNFLPR*WAQHRA
Trigger: TGCCCTGTGTTGAGCCCATCAACGTGGAAGGAAGTT...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTGCCTACTGCAGTTGTaGCTGTATAGAAAAGAAACT +
Preference number: 4 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFCLLQL*LYRKET
Trigger: AGTTTCTTTTCTATACAGTCACAACTGCAGTAGGCA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp GCAGTCCCCACCAAGAGAACACAAGGACGTATACCCTTTAGTCTCTGTCATATGTGTTCCTCTTTGAGATaGGCAGTAATGCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: AVPTKRTQGRIPFSLCHMCSSLR*AVMLRA
Trigger: TGCTCTCAGCATTACTGCTCATCTCAAAGAGGAACA...CATATGACAGAGACTAAAGGGTATACGTCCTTGTGTTCTCTTGGTGGGGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR GCA 90 bp GAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTTAAGAAGACTCTGCCAGCACTTCCAGGACTCAGCTaGCAGGAATATATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: EDVLSGHSPSPVKKTLPALPGLS*QEYIPF
Trigger: GAAGGGGATATATTCCTGGCAGCTGAGTCCTGGAAG...TGCTGGCAGAGTCTTCTTAACAGGACTTGGACTGTGACCAGATAAAACATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGATCCCCGGGCAGTTCCTaGGCTCCTCGCACTTGGACT +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGSPGSS*APRTWT
Trigger: AGTCCAAGTGCGAGGAGCCCAGGAACTGCCCGGGGA...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGTTAAATACGCAGGCTaGCTTTGTATCATTAACACA +
Preference number: 4 (lower is better)
Translates to: WATELLLCYQVSPRAKLTVKYAG*LCIINT
Trigger: TGTGTTAATGATACAAAGCCAGCCTGCGTATTTAAC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAATGGCAACGCCCCCTTaGCATCGACAGAACCGACAG +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEMATPP*HRQNRQ
Trigger: CTGTCGGTTCTGTCGATGCCAAGGGGGCGTTGCCAT...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAGCACTTCTTGGGCCTTaGGCGGCACTCACAGATCTC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEALLGP*AALTDL
Trigger: GAGATCTGTGAGTGCCGCCCAAGGCCCAAGAAGTGC...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp TTGGCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCCTTGATCTGTACACTGTaGGCAGCAGGAATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LASFCTYRRCFIWSQSKSLICTL*AAGILG
Trigger: ACCCAGGATTCCTGCTGCCCACAGTGTACAGATCAA...GGACTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CCA 90 bp GCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTCAATGCAGATGCAGCTaGTACAAACGTCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ASFCTYRRCFIWSQSKSCQCRCS*YKRQAS
Trigger: GGAAGCCTGACGTTTGTACCAGCTGCATCTGCATTG...ACAGGACTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR TCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTACAGATAAGACAGCCGTaGCTGTCCTGCTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVQIRQP*LSCWKP
Trigger: GGGTTTCCAGCAGGACAGTCACGGCTGTCTTATCTG...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATCCTTCCCTGTCAGAGTaGAGTTTGATAACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYPSLSE*SLITPH
Trigger: GTGGGGAGTTATCAAACTGCACTCTGACAGGGAAGG...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp AGATTGGCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGCTGAGCTCTGGCTTCTaGACCACAAAGTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: RLASFCTYRRCFIWSQSKLSSGF*TTKSSA
Trigger: TGCAGATGACTTTGTGGTGCAGAAGCCAGAGCTCAG...CTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGCCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CCA 90 bp CGTATACCCTTTAGTCTCTGTCATATGAAATGGCATCAGCATAAACTTTCAAATTCTCGTTCCTCTGGCTaGCGCACGTGTAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RIPFSLCHMKWHQHKLSNSRSSG*RTCSSS
Trigger: GCTGCTGCTACACGTGCGCCAGCCAGAGGAACGAGA...ATTTGAAAGTTTATGCTGATGCCATTTCATATGACAGAGACTAAAGGGTATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR CCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAATTCAGGTTTCCCGGCTaGCAGACTTTGCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEFRFPG*QTLRRQ
Trigger: CTGTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGAA...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATGTCCACGCCGAAAACTaGTTTGCACTCATAGAGGTC +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYVHAEN*FALIEV
Trigger: GACCTCTATGAGTGCAAACCAGTTTTCGGCGTGGAC...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATTTTATCTCACCACACTaGGCGGTGAAGCAGATGGCA +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYFISPH*AVKQMA
Trigger: TGCCATCTGCTTCACCGCCCAGTGTGGTGAGATAAA...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGATGGGTCTGCACTTCTTaGGCCTTGGGCGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGWVCTS*ALGGTH
Trigger: GTGAGTGCCGCCCAAGGCCCAAGAAGTGCAGACCCA...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACTCCCCGAGCCAAGCTaGCCAATTTTTCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVELPEPS*PIFLPN
Trigger: GTTGGGAAGAAAAATTGGTCAGCTTGGCTCGGGGAG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACACAGATTATGGGTCTaGACTTCTTGGGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEHRLWV*TSWALG
Trigger: GCCCAAGGCCCAAGAAGTGCAGACCCATAATCTGTG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATAGGGGCAGATCTTACTaGATGAGAGCTCTGGACATT +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYRGRSY*MRALDI
Trigger: AATGTCCAGAGCTCTCATGCAGTAAGATCTGCCCCT...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATACTTGTCACAGATTATaGGTCTGCACTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYTCHRL*VCTSWA
Trigger: GGCCCAAGAAGTGCAGACCCATAATCTGTGACAAGT...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGACATAGGCCTTCCCACTaGAGTGGCACACCACCTTCT +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGHRPSH*SGTPPS
Trigger: AGAAGGTGGTGTGCCACTTCAGTGGGAAGGCCTATG...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACGCCGAAAACTGGTTTaGACTCATAGAGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVERRKLV*THRGHS
Trigger: GCTGTGACCTCTATGAGTGCAAACCAGTTTTCGGCG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAGGCATTCCACAGTCCTaGAGTCCACGCCGAAAACTG +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGGIPQS*SPRRKL
Trigger: CAGTTTTCGGCGTGGACTGCAGGACTGTGGAATGCC...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTACTGAGCTCTGGCTTCTaGACCACAAAGTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVLSSGF*TTKSSA
Trigger: TGCAGATGACTTTGTGGTGCAGAAGCCAGAGCTCAG...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACTTCCAGGACTCAGCTaGCAGGAATATATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVELPGLS*QEYIPF
Trigger: GAAGGGGATATATTCCTGGCAGCTGAGTCCTGGAAG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAGCTTGTTCTGCACATTaGTGTAGACAGAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEACSAH*CRQSPS
Trigger: GGATGGGCTCTGTCTACAGCAATGTGCAGAACAAGC...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATACACTCGCATCTTGTTaGCAAAGTACAGCAACCATC +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYTLASC*QSTATI
Trigger: GATGGTTGCTGTACTTTGCCAACAAGATGCGAGTGT...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATCCACAACTGAGGCAATaGAGTCCAGTGAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYPQLRQ*SPVKNL
Trigger: AAGATTCTTCACTGGACTCCATTGCCTCAGTTGTGG...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAAAATGGAGGGAGTACTaGGCTCTGGCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGKWREY*ALASAP
Trigger: TGGTGCAGAAGCCAGAGCTCAGTACTCCCTCCATTT...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACTGCTAGGAACTGGCTaGTTGATTGGCTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVELLGTG*LIGLEE
Trigger: TTCTTCCAAGCCAATCAATCAGCCAGTTCCTAGCAG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAAGGGACAGTTCAAGGTaGAGCCTTGTTTACGTTCTG +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVERDSSR*SLVYVL
Trigger: CAGAACGTAAACAAGGCTGCACCTTGAACTGTCCCT...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGATATAGCCCCTGGAAATaGCTGGTGTTCGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGYSPWK*LVFVTL
Trigger: GAGGGTGACGAACACCAGGCATTTCCAGGGGCTATA...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATTGCTGCAGGTTCGAATaGTGTTACATTCACATTTCC +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYCCRFE*CYIHIS
Trigger: GGAAATGTGAATGTAACACCATTCGAACCTGCAGCA...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGTGAAATATAGCCCCTaGAAATGCCTGGTGTTCGTC +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVVKYSP*KCLVFV
Trigger: GACGAACACCAGGCATTTCCAGGGGCTATATTTCAC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAGCAGATCTTACTGCATaGGAGCTCTGGACATTTCTT +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEADLTA*ELWTFL
Trigger: AAGAAATGTCCAGAGCTCTCATGCAGTAAGATCTGC...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATAGCAACAACAAACAGTaGAATATAGCCCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYSNNKQ*NIAPGN
Trigger: ATTTCCAGGGGCTATATTTCACTGTTTGTTGTTGCT...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAGAAACTCAAAGGGATTaGTGCAGGTTCGAATGGTGT +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEETQRD*CRFEWC
Trigger: ACACCATTCGAACCTGCAGCAATCCCTTTGAGTTTC...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAATTGTGTCTTCTATaGAGTAGGGACAACACTGGC +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVELCLL*SRDNTG
Trigger: GCCAGTGTTGTCCCTACTGCATAGAAGACACAATTC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp GAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTTAAGAAGACTCTGCCAGCAAGATTGGCCAGTTTCTaGACCTATAGAAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: EDVLSGHSPSPVKKTLPARLASF*TYRRCF
Trigger: AAAACATCTTCTATAGGTGCAGAAACTGGCCAATCT...TGCTGGCAGAGTCTTCTTAACAGGACTTGGACTGTGACCAGATAAAACATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR GCA 90 bp CGTATACCCTTTAGTCTCTGTCATATGAAATGGCATCAGCATAAACTTTCAAATGTAGATATGATCACCTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: RIPFSLCHMKWHQHKLSNVDMIT*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGGTGATCATATCTAC...ATTTGAAAGTTTATGCTGATGCCATTTCATATGACAGAGACTAAAGGGTATACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATATTAAAAGGATACACTaGATCTTCACACACTGGGCA +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYIKRIH*IFTHWA
Trigger: TGCCCAGTGTGTGAAGATCCAGTGTATCCTTTTAAT...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGATTGATCTGTACACTGTaGGCAGCAGGAATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGLICTL*AAGILG
Trigger: ACCCAGGATTCCTGCTGCCCACAGTGTACAGATCAA...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGATGTCCACCTGGACTCTaGTTCCTTTCTTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGCPPGL*FLSCSP
Trigger: TGGACTGCAAGAAAGGAACCAGAGTCCAGGTGGACA...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAGCCACTGAATCTTaGATCTGGTTCTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVEATES*IWFCNS
Trigger: AGAATTGCAGAACCAGATGCAAGATTCAGTGGCTTC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTATTCCTCACTGCCTACTaGAGTTGTGACTGTATAGAA +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVFLTAY*SCDCIE
Trigger: TTCTATACAGTCACAACTGCAGTAGGCAGTGAGGAA...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAATCCACAGATACTAGCTaGTTATTTAAGGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVESTDTS*LFKEEG
Trigger: GCCTTCTTCCTTAAATAATCAGCTAGTATCTGTGGA...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAGTGCTAAGGGCTGTTTaGAAAGTTACCACTATAGTA +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEVLRAV*KVTTIV
Trigger: TACTATAGTGGTAACTTTTCAAACAGCCCTTAGCAC...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR GCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAGAGGAAAAGTGGGAATaGTTGTTCTGCACATTGCTG +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGEEKWE*LFCTLL
Trigger: CAGCAATGTGCAGAACAAGCATTCCCACTTTTCCTC...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATAAGGTTTTCATTGCATaGTTTAAAACCAAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYKVFIA*FKTKQL
Trigger: CAACTGCTTGGTTTTAAACCATGCAATGAAAACCTT...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAATCTCAATGGGTATATTaGTTGGTTCTGGGACATACA +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVESQWVY*LVLGHT
Trigger: TGTATGTCCCAGAACCAACCAATATACCCATTGAGA...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGGTTTGTCTTCTCAATaGGTATATTGGTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVGLSSQ*VYWLVL
Trigger: CAGAACCAACCAATATACCCATTGAGAAGACAAACC...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGACATCTGCAGTTAGTCTaGCTTGAGTTTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGHLQLV*LEFHSC
Trigger: ACAGCTATGAAACTCAAGTCAGACTAACTGCAGATG...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR TCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAATCCACTGTTTCTTCTaGTTGATGAATAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEIHCFF*LMNRNA
Trigger: AGCATTCCTATTCATCAATCAGAAGAAACAGTGGAT...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTATATATTGGTTGGTTCTaGGACATACATTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVYIGWF*DIHFWT
Trigger: TGTCCAGAAATGTATGTCCCAGAACCAACCAATATA...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAAATGGGTATATTGGTTaGTTCTGGGACATACATTTC +
Preference number: 4 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVENGYIG*FWDIHF
Trigger: GAAATGTATGTCCCAGAACCAACCAATATACCCATT...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGATCAAAAGCACTGCTATaGAATGCCTGTTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGSKALL*NACLSA
Trigger: GGCAGATAAACAGGCATTCCATAGCAGTGCTTTTGA...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CCA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAATATCTCTAGGGAGATaGACGATATCATTTTCACTA +
Preference number: 4 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVISLGR*TISFSL
Trigger: TAGTGAAAATGATATCGTCCATCTCCCTAGAGATAT...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS GCA 90 bp CTCCGGTTCAACCCAAACTTCTGGCGCGGCGGCGGCGGTGGCTGCTaGGCTCGGCTCCAGCCCGGGCCGGCGGCGCCTCCTCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LRFNPNFWRGGGGGC*ARLQPGPAAPPPSP
Trigger: AGGAGAGGGAGGAGGCGCCGCCGGCCCGGGCTGGAGCCGAGCGCAGCAGCCACCGCCGCCGCCGCGCCAGAAGTTTGGGTTGAACCGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp AGCAGCAGCCGCAGACGCCCTGCACGATGCTCCCCGGGCAGTTCCTaGGCTCCTCGCACTTGGACTCGTCACAGGGCAGGCAGACCAGCG +
Preference number: 5 (lower is better)
Translates to: SSSRRRPARCSPGSS*APRTWTRHRAGRPA
Trigger: CGCTGGTCTGCCTGCCCTGTGACGAGTCCAAGTGCGAGGAGCCCAGGAACTGCCCGGGGAGCATCGTGCAGGGCGTCTGCGGCTGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000619935.1
CDS GCA 90 bp TCTGGCTGGCGCACGTGTAGCAGCAGCCGCAGACGCCCTGCACGATaGTCCCCGGGCAGTTCCTGGGCTCCTCGCACTTGGACTCGTCAC +
Preference number: 5 (lower is better)
Translates to: SGWRTCSSSRRRPAR*SPGSSWAPRTWTRH
Trigger: GTGACGAGTCCAAGTGCGAGGAGCCCAGGAACTGCCCGGGGAGCATCGTGCAGGGCGTCTGCGGCTGCTGCTACACGTGCGCCAGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000619935.1
CDS GCA 90 bp TCAGGTTTCCCGGCTGGCAGACTTTGCGCAGACAGCCTGCGGGGTTaGACACGCAGCGGCTGGGTAAGGGACAGCACTCCCCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SGFPAGRLCADSLRG*TRSGWVRDSTPQEE
Trigger: CTCCTCCTGGGGAGTGCTGTCCCTTACCCAGCCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CCA 90 bp TTCCGTAAATCCCGAAGGTGCCGCCGCAGCTCTCGTTCCTCTGGCTaGCGCACGTGTAGCAGCAGCCGCAGACGCCCTGCACGATGCTCC +
Preference number: 5 (lower is better)
Translates to: FRKSRRCRRSSRSSG*RTCSSSRRRPARCS
Trigger: GGAGCATCGTGCAGGGCGTCTGCGGCTGCTGCTACACGTGCGCCAGCCAGAGGAACGAGAGCTGCGGCGGCACCTTCGGGATTTACGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280527.7
ENST00000426856.1
ENST00000613124.1
ENST00000619935.1
CDS CCA 90 bp TGTCCGCAGACGGTCGCAACGCAGTGGCGTTCACCGTTGACGCACTaGCAGAATGTGCAGTCGTCTTCCCGCCACCGGTCTCCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: CPQTVATQWRSPLTH*QNVQSSSRHRSPWA
Trigger: TGCCCACGGAGACCGGTGGCGGGAAGACGACTGCACATTCTGCCAGTGCGTCAACGGTGAACGCCACTGCGTTGCGACCGTCTGCGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS TCA 90 bp TGCAGGTCTGTCCGCAGACGGTCGCAACGCAGTGGCGTTCACCGTTaGCGCACTGGCAGAATGTGCAGTCGTCTTCCCGCCACCGGTCTC +
Preference number: 5 (lower is better)
Translates to: CRSVRRRSQRSGVHR*RTGRMCSRLPATGL
Trigger: GAGACCGGTGGCGGGAAGACGACTGCACATTCTGCCAGTGCGTCAACGGTGAACGCCACTGCGTTGCGACCGTCTGCGGACAGACCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS CCA 90 bp GGCAGACTTTGCGCAGACAGCCTGCGGGGTTGCACACGCAGCGGCTaGGTAAGGGACAGCACTCCCCAGGAGGAGCATAACCCTCGATCA +
Preference number: 5 (lower is better)
Translates to: GRLCADSLRGCTRSG*VRDSTPQEEHNPRS
Trigger: TGATCGAGGGTTATGCTCCTCCTGGGGAGTGCTGTCCCTTACCCAGCCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS GCA 90 bp CTTCGCACACAGGGCAACACTCCCCAGGCACTTTCACAGGGTTTGTaGAGGTCTGTCCGCAGACGGTCGCAACGCAGTGGCGTTCACCGT +
Preference number: 5 (lower is better)
Translates to: LRTQGNTPQALSQGL*RSVRRRSQRSGVHR
Trigger: ACGGTGAACGCCACTGCGTTGCGACCGTCTGCGGACAGACCTGCACAAACCCTGTGAAAGTGCCTGGGGAGTGTTGCCCTGTGTGCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS CCA 90 bp GGCTTCCCTGAGGCTTTTGACACTAGTATGTTCAGGTTTCCCGGCTaGCAGACTTTGCGCAGACAGCCTGCGGGGTTGCACACGCAGCGG +
Preference number: 5 (lower is better)
Translates to: GFPEAFDTSMFRFPG*QTLRRQPAGLHTQR
Trigger: CCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGAACATACTAGTGTCAAAAGCCTCAGGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS-3UTR CAA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCGATGGCAACGCCCCCTaGGCATCGACAGAACCGACA +
Preference number: 5 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARDGNAP*ASTEPT
Trigger: TGTCGGTTCTGTCGATGCCAAGGGGGCGTTGCCATC...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCATGGGTCTGCACTTCTaGGGCCTTGGGCGGCACTCA +
Preference number: 5 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARMGLHF*GLGRHS
Trigger: TGAGTGCCGCCCAAGGCCCAAGAAGTGCAGACCCAT...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 90 bp CGGGCACGTAGTACCTCTCGCAGTTTATCTCACCACACTGGGCGGTaGAGCAGATGGCAACGCCCCCTTGGCATCGACAGAACCGACAGT +
Preference number: 5 (lower is better)
Translates to: RARSTSRSLSHHTGR*SRWQRPLGIDRTDS
Trigger: ACTGTCGGTTCTGTCGATGCCAAGGGGGCGTTGCCATCTGCTTCACCGCCCAGTGTGGTGAGATAAACTGCGAGAGGTACTACGTGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS GCA 90 bp AGGCTTTTGACACTAGTATGTTCAGGTTTCCCGGCTGGCAGACTTTaGGCAGACAGCCTGCGGGGTTGCACACGCAGCGGCTGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: RLLTLVCSGFPAGRL*ADSLRGCTRSGWVR
Trigger: CCTTACCCAGCCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGAACATACTAGTGTCAAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CCA 90 bp TTCACAGGGTTTGTGCAGGTCTGTCCGCAGACGGTCGCAACGCAGTaGCGTTCACCGTTGACGCACTGGCAGAATGTGCAGTCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: FTGFVQVCPQTVATQ*RSPLTHWQNVQSSS
Trigger: GGAAGACGACTGCACATTCTGCCAGTGCGTCAACGGTGAACGCCACTGCGTTGCGACCGTCTGCGGACAGACCTGCACAAACCCTGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS CCA 90 bp AGCACTTTCCAGGTGTCCCATCGCCACGAGAGACTATGCGGGGAGTaGATCCCACCTCACACACGGGGAAACCACATAAGCCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: STFQVSHRHERLCGE*IPPHTRGNHISQRD
Trigger: GTCTCTCTGGCTTATGTGGTTTCCCCGTGTGTGAGGTGGGATCCACTCCCCGCATAGTCTCTCGTGGCGATGGGACACCTGGAAAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS GCA 90 bp AGACATCACAGCACTTTCCAGGTGTCCCATCGCCACGAGAGACTATaGGGGGAGTGGATCCCACCTCACACACGGGGAAACCACATAAGC +
Preference number: 5 (lower is better)
Translates to: RHHSTFQVSHRHERL*GEWIPPHTRGNHIS
Trigger: GCTTATGTGGTTTCCCCGTGTGTGAGGTGGGATCCACTCCCCGCATAGTCTCTCGTGGCGATGGGACACCTGGAAAGTGCTGTGATGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS GCA 90 bp GTGGGCACACCTCTGTCTCACACAGCACCCGTCCGCTGTGGCAGGTaGACTGAGTACAGGAGTCAATGTTCCACGTTTCTCCTTCCACAA +
Preference number: 5 (lower is better)
Translates to: VGTPLSHTAPVRCGR*TEYRSQCSTFLLPQ
Trigger: TTGTGGAAGGAGAAACGTGGAACATTGACTCCTGTACTCAGTGCACCTGCCACAGCGGACGGGTGCTGTGTGAGACAGAGGTGTGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000413985.1
CDS-3UTR CAA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATCCGAGCCCACGAGCCTaGGCGCCGGCGGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYPSPRA*APAAAS
Trigger: GGAAGCTGCCGCCGGCGCCAAGGCTCGTGGGCTCGG...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 90 bp CCAGCTGAAGCAGAGGCCTCTCTGCACTTGCAGATAAGACAGCCGTaGCTGTCCTGCTGGAAACCCAAGGGGCAGATCTTACTGCATGAG +
Preference number: 5 (lower is better)
Translates to: PAEAEASLHLQIRQP*LSCWKPKGQILLHE
Trigger: CTCATGCAGTAAGATCTGCCCCTTGGGTTTCCAGCAGGACAGTCACGGCTGTCTTATCTGCAAGTGCAGAGAGGCCTCTGCTTCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 90 bp CATCGTGCCAGCTCTCCTCATTTTTATGATGATGACCATCCACGGTaGGACAAGTGCCCGACAGGATGGGTGGCCCAGCTGAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: HRASSPHFYDDDHPR*DKCPTGWVAQLKQR
Trigger: CCTCTGCTTCAGCTGGGCCACCCATCCTGTCGGGCACTTGTCTCACCGTGGATGGTCATCATCATAAAAATGAGGAGAGCTGGCACGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCGTCGCAAGGCCTTTTTaGTTTCCTGCTCATTCAGGC +
Preference number: 5 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARVARPF*FPAHSG
Trigger: GCCTGAATGAGCAGGAAACAAAAAAGGCCTTGCGAC...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 90 bp GCCGTGACTGTCCTGCTGGAAACCCAAGGGGCAGATCTTACTGCATaGGAGCTCTGGACATTTCTTACAGCGACAGATGTCACAGCCGTG +
Preference number: 5 (lower is better)
Translates to: AVTVLLETQGADLTA*ELWTFLTATDVTAV
Trigger: CACGGCTGTGACATCTGTCGCTGTAAGAAATGTCCAGAGCTCTCATGCAGTAAGATCTGCCCCTTGGGTTTCCAGCAGGACAGTCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 90 bp CCACAAAGTATTCTCCTCCAGGGGCGTGGCAAATGGAGGGAGTACTaGGCTCTGGCTTCTGCACCACAAAGTCATCTGCACATGATGGGC +
Preference number: 5 (lower is better)
Translates to: PQSILLQGRGKWREY*ALASAPQSHLHMMG
Trigger: GCCCATCATGTGCAGATGACTTTGTGGTGCAGAAGCCAGAGCTCAGTACTCCCTCCATTTGCCACGCCCCTGGAGGAGAATACTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000413985.1
CDS TCA 90 bp AGCTGTCAAGGTCCCACCGCTCCTCGTCGGCATAGGCCTTCCCACTaGAGTGGCACACCACCTTCTTTGGAATTGTGTCTTCTATGCAGT +
Preference number: 5 (lower is better)
Translates to: SCQGPTAPRRHRPSH*SGTPPSLELCLLCS
Trigger: ACTGCATAGAAGACACAATTCCAAAGAAGGTGGTGTGCCACTTCAGTGGGAAGGCCTATGCCGACGAGGAGCGGTGGGACCTTGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp CTGCACTTCTTGGGCCTTGGGCGGCACTCACAGATCTCACAGTTTTaGGCATCAGTAAGGAAACCGAAGGGACAGTTCAAGGTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LHFLGLGRHSQISQF*ASVRKPKGQFKVQP
Trigger: AGGCTGCACCTTGAACTGTCCCTTCGGTTTCCTTACTGATGCCCAAAACTGTGAGATCTGTGAGTGCCGCCCAAGGCCCAAGAAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCGTCGTCTTCCGTCTTTaGAAACCTCATCCTAGTTGC +
Preference number: 5 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARVVFRL*KPHPSC
Trigger: GCAACTAGGATGAGGTTTCAAAAGACGGAAGACGAC...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 90 bp CACACCTCTGTCTCACACAGCACCCGTCCGCTGTGGCAGGTGCACTaGGTACAGGAGTCAATGTTCCACGTTTCTCCTTCCACAAAGTAT +
Preference number: 5 (lower is better)
Translates to: HTSVSHSTRPLWQVH*VQESMFHVSPSTKY
Trigger: ATACTTTGTGGAAGGAGAAACGTGGAACATTGACTCCTGTACTCAGTGCACCTGCCACAGCGGACGGGTGCTGTGTGAGACAGAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000413985.1
CDS GCA 90 bp GACAGCCGTGACTGTCCTGCTGGAAACCCAAGGGGCAGATCTTACTaGATGAGAGCTCTGGACATTTCTTACAGCGACAGATGTCACAGC +
Preference number: 5 (lower is better)
Translates to: DSRDCPAGNPRGRSY*MRALDISYSDRCHS
Trigger: GCTGTGACATCTGTCGCTGTAAGAAATGTCCAGAGCTCTCATGCAGTAAGATCTGCCCCTTGGGTTTCCAGCAGGACAGTCACGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp TTTATCTCACCACACTGGGCGGTGAAGCAGATGGCAACGCCCCCTTaGCATCGACAGAACCGACAGTTGTCCATTCGAAACATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: FISPHWAVKQMATPP*HRQNRQLSIRNMSP
Trigger: TGGAGACATGTTTCGAATGGACAACTGTCGGTTCTGTCGATGCCAAGGGGGCGTTGCCATCTGCTTCACCGCCCAGTGTGGTGAGATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp CTAGGCGTGGGCCACAGGGGAACCTCCAGGTCAACCTCTCCTCGATaGTTTGTCTTCTCAATGGGTATATTGGTTGGTTCTGGGACATAC +
Preference number: 5 (lower is better)
Translates to: LGVGHRGTSRSTSPR*FVFSMGILVGSGTY
Trigger: GTATGTCCCAGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGAGAGGTTGACCTGGAGGTTCCCCTGTGGCCCACGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp AATCTTCAGGACAACGTGGAGAGAACTGGACTTCACAGCGGGCCTTaGAGCAATCTGGCTTCTCTTCTTCGCAAACGCCCGCTTCGTACT +
Preference number: 5 (lower is better)
Translates to: NLQDNVERTGLHSGP*SNLASLLRKRPLRT
Trigger: AGTACGAAGCGGGCGTTTGCGAAGAAGAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426856.1
CDS-3UTR CAA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTACTTCACAGCGGGCCTaGGAGCAATCTGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFTSQRA*EQSGFS
Trigger: AGAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAGT...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCTTAGGTACGCTGTTATaGCGGGACAAGGAAGGCCGA +
Preference number: 5 (lower is better)
Translates to: WATELLLCYQVSPRAKLTLGTLL*RDKEGR
Trigger: TCGGCCTTCCTTGTCCCGCAATAACAGCGTACCTAA...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp AGAGGGTTCTTATCAGGTGGGCCCTCTTGTGATGGGGTCTTCCCCCATATCCTTTTAGGTACGCTGTTATaGCGGGACAAGGAAGGCCGA +
Preference number: 5 (lower is better)
Translates to: RGFLSGGPSCDGVFPHILLGTLL*RDKEGR
Trigger: TCGGCCTTCCTTGTCCCGCAATAACAGCGTACCTAA...AAGGATATGGGGGAAGACCCCATCACAAGAGGGCCCACCTGATAAGAACCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS CCA 90 bp AGGAGGAGCATAACCCTCGATCAGAACAGAATCTTCAGGACAACGTaGAGAGAACTGGACTTCACAGCGGGCCTTGGAGCAATCTGGCTT +
Preference number: 5 (lower is better)
Translates to: RRSITLDQNRIFRTT*RELDFTAGLGAIWL
Trigger: AAGCCAGATTGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATTCTGTTCTGATCGAGGGTTATGCTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CCA 90 bp ATGTTCCACGTTTCTCCTTCCACAAAGTATTCTCCTCCAGGGGCGTaGCAAATGGAGGGAGTACTGAGCTCTGGCTTCTGCACCACAAAG +
Preference number: 5 (lower is better)
Translates to: MFHVSPSTKYSPPGA*QMEGVLSSGFCTTK
Trigger: CTTTGTGGTGCAGAAGCCAGAGCTCAGTACTCCCTCCATTTGCCACGCCCCTGGAGGAGAATACTTTGTGGAAGGAGAAACGTGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000413985.1
CDS-3UTR CAA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGGAAACTCAAAGGGATaGCTGCAGGTTCGAATGGTG +
Preference number: 5 (lower is better)
Translates to: WATELLLCYQVSPRAKLTGNSKG*LQVRMV
Trigger: CACCATTCGAACCTGCAGCAATCCCTTTGAGTTTCC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTACCCGGCTGGCAGACTTaGCGCAGACAGCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVPGWQT*RRQPAG
Trigger: CCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGG...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp CCCAGGCACCTCAGAATGAATGGTGGCACTCCTTTCCCTACTGTTGCATCTGGATTGCATCTGGACCATTaGGGGGACCATTTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: PRHLRMNGGTPFPTVASGLHLDH*GDHLFL
Trigger: GAGGAACAAATGGTCCCCCAAATGGTCCAGATGCAA...TCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCATTCTGAGGTGCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS TCA 90 bp ACTCGCATCTTGTTGGCAAAGTACAGCAACCATCTGCAGTTAGTCTaGCTTGAGTTTCATAGCTGTCCGGGGGACACGCGGTCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: TRILLAKYSNHLQLV*LEFHSCPGDTRSAE
Trigger: TTCAGCAGACCGCGTGTCCCCCGGACAGCTATGAAACTCAAGTCAGACTAACTGCAGATGGTTGCTGTACTTTGCCAACAAGATGCGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS TCA 90 bp TGTAGATATGATCACCTGCACTCCAGCCGCCTTACGTTAGAGCTGTaGGCTTCATCCAGAGTATGGCCCAGGCACCTCAGAATGAATGGT +
Preference number: 5 (lower is better)
Translates to: CRYDHLHSSRLTLEL*ASSRVWPRHLRMNG
Trigger: ACCATTCATTCTGAGGTGCCTGGGCCATACTCTGGATGAAGCTCACAGCTCTAACGTAAGGCGGCTGGAGTGCAGGTGATCATATCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477491.5
CDS-3UTR CAA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAAGACAGCCTGCGGGGTaGCACACGCAGCGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVRQPAG*HTQRLG
Trigger: ACCCAGCCGCTGCGTGTGCAACCCCGCAGGCTGTCT...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCGCTTCCCTGAGGCTTTaGACACTAGTATGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: WATELLLCYQVSPRAKLTASLRL*TLVCSG
Trigger: ACCTGAACATACTAGTGTCAAAAGCCTCAGGGAAGC...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCTGTCAGAGTGCAGTTaGATAACTCCCCACATGCAG +
Preference number: 5 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFLSECS*ITPHMQ
Trigger: CTGCATGTGGGGAGTTATCAAACTGCACTCTGACAG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS GCA 90 bp ACTACAGCAAACACACATGCACTCATGGGCTGCTTTGTAGAGAAATaGTGGGCCCTTGGCATGCAGATTCTCATTACTGCCGCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: TTANTHALMGCFVEK*WALGMQILITAAEV
Trigger: AACCTCTGCGGCAGTAATGAGAATCTGCATGCCAAGGGCCCAGCATTTCTCTACAAAGCAGCCCATGAGTGCATGTGTGTTTGCTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473403.5
CDS-3UTR CAA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAACTGGGCTCCTCGCACTaGGACTCGTCACAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVELGSSH*DSSQGR
Trigger: CCTGCCCTGTGACGAGTCCAAGTGCGAGGAGCCCAG...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTAGAGACACTCGCATCTaGTTGGCAAAGTACAGCAAC +
Preference number: 5 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFRDTRI*LAKYSN
Trigger: GTTGCTGTACTTTGCCAACAAGATGCGAGTGTCTCT...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACCCTTCTCCATAGCAGGTGCAATGCTGACTGCTCAAGGCGTGCGTGCGCGCGTTCTAAGAAAACACTaGGTCAGTTATCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: IPFSIAGAMLTAQGVRARVLRKH*VSYLEE
Trigger: TTCCTCAAGATAACTGACCAAGTGTTTTCTTAGAAC...GCGCGCACGCACGCCTTGAGCAGTCAGCATTGCACCTGCTATGGAGAAGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATGAATGGTGGCACTCCTTTCCCTACTGTTGCATCTGGACCATTTGGGGGACCACATTTGGGGGACCATTaGTTCCTCTTTGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: MNGGTPFPTVASGPFGGPHLGDH*FLFEMS
Trigger: GCTCATCTCAAAGAGGAACAAATGGTCCCCCAAATG...TGGTCCCCCAAATGGTCCAGATGCAACAGTAGGGAAAGGAGTGCCACCATTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428774.1
CDS TCA 90 bp TGTTGCATCTGGACCATTTGGGGGACCATTTGTTCCTCTTTGAGATaGGCAGTAATGCTGAGAGCAGCCTCAAATTCAATACCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: CCIWTIWGTICSSLR*AVMLRAASNSIPRS
Trigger: GCTGCGGGGTATTGAATTTGAGGCTGCTCTCAGCATTACTGCTCATCTCAAAGAGGAACAAATGGTCCCCCAAATGGTCCAGATGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428774.1
ENST00000473403.5
CDS CCA 90 bp TGGACAATACTTGTCACAGATTATGGGTCTGCACTTCTTGGGCCTTaGGCGGCACTCACAGATCTCACAGTTTTGGGCATCAGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: WTILVTDYGSALLGP*AALTDLTVLGISKE
Trigger: TTCCTTACTGATGCCCAAAACTGTGAGATCTGTGAGTGCCGCCCAAGGCCCAAGAAGTGCAGACCCATAATCTGTGACAAGTATTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATCAGTGGCGTTCACCGTaGACGCACTGGCAGAATGTG +
Preference number: 5 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYQWRSP*THWQNV
Trigger: CACATTCTGCCAGTGCGTCAACGGTGAACGCCACTG...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp CCAGGTCAACCTCTCCTCGATGGTTTGTCTTCTCAATGGGTATATTaGTTGGTTCTGGGACATACATTTCTGGACACATTGGGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: PGQPLLDGLSSQWVY*LVLGHTFLDTLGSN
Trigger: GTTGCTGCCCAATGTGTCCAGAAATGTATGTCCCAGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGAGAGGTTGACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp GGGGAACCTCCAGGTCAACCTCTCCTCGATGGTTTGTCTTCTCAATaGGTATATTGGTTGGTTCTGGGACATACATTTCTGGACACATTG +
Preference number: 5 (lower is better)
Translates to: GEPPGQPLLDGLSSQ*VYWLVLGHTFLDTL
Trigger: CAATGTGTCCAGAAATGTATGTCCCAGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGAGAGGTTGACCTGGAGGTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp AAGCCACTGAATCTTGCATCTGGTTCTGCAATTCTTAGCATTCTCTaGGAACTGTCCACCTGGACTCTGGTTCCTTTCTTGCAGTCCACA +
Preference number: 5 (lower is better)
Translates to: KPLNLASGSAILSIL*ELSTWTLVPFLQST
Trigger: TGTGGACTGCAAGAAAGGAACCAGAGTCCAGGTGGACAGTTCCCAGAGAATGCTAAGAATTGCAGAACCAGATGCAAGATTCAGTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTTTTAAAACCAAGCAGTaGGTCATCAGTCCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFFKTKQ*VISPVL
Trigger: GAGAACTGGACTGATGACCAACTGCTTGGTTTTAAA...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TTGGCCAGTTTCTGCACCTATAGAAGATGTTTTATCTGGTCACAGTCCAAGTCCGGAAGGCCGAAAAGGTaGATCTGTACACTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: LASFCTYRRCFIWSQSKSGRPKR*ICTLWA
Trigger: TGCCCACAGTGTACAGATCAACCTTTTCGGCCTTCC...GGACTTGGACTGTGACCAGATAAAACATCTTCTATAGGTGCAGAAACTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS-3UTR CAA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTACTTGGTCAGTTATCTaGAGGAAAAGTGGGAATGCT +
Preference number: 5 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFTWSVI*RKSGNA
Trigger: AGCATTCCCACTTTTCCTCAAGATAACTGACCAAGT...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCAGTGCTAAGGGCTGTTaGAAAAGTTACCACTATAGT +
Preference number: 5 (lower is better)
Translates to: WATELLLCYQVSPRAKLTSAKGC*KSYHYS
Trigger: ACTATAGTGGTAACTTTTCAAACAGCCCTTAGCACT...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCCTGCCAAGAATCAAGTaGCAGATAATTCTCTTACAG +
Preference number: 5 (lower is better)
Translates to: WATELLLCYQVSPRAKLTLPRIK*QIILLQ
Trigger: CTGTAAGAGAATTATCTGCAACTTGATTCTTGGCAG...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp CAGCCAGCAATAAGGTTTTCATTGCATGGTTTAAAACCAAGCAGTTaGTCATCAGTCCAGTTCTCATCTTCGCAAACGCCCGCTTCGTAC +
Preference number: 5 (lower is better)
Translates to: QPAIRFSLHGLKPSS*SSVQFSSSQTPASY
Trigger: GTACGAAGCGGGCGTTTGCGAAGATGAGAACTGGACTGATGACCAACTGCTTGGTTTTAAACCATGCAATGAAAACCTTATTGCTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATGGAAGGCCGAAAAGGTaGATCTGTACACTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYGRPKR*ICTLWA
Trigger: TGCCCACAGTGTACAGATCAACCTTTTCGGCCTTCC...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TGCTCGTCTGGTAGTTCTAAGGTGGTTATGGCAGCTGGGTCGCAAGGCCTTTTTCAATGGGTATATTGGTaGGTTCTGGGACATACATTT +
Preference number: 5 (lower is better)
Translates to: CSSGSSKVVMAAGSQGLFQWVYW*VLGHTF
Trigger: AAATGTATGTCCCAGAACCAACCAATATACCCATTG...AAAAAGGCCTTGCGACCCAGCTGCCATAACCACCTTAGAACTACCAGACGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp TGGGCCACTGAACTGCTTTTATGTTACCAGGTTTCTCCCCGAGCCAAGCTGACCCCTGTTTATCTGCCTTaGTTCTGGTTAAAATCTCAT +
Preference number: 5 (lower is better)
Translates to: WATELLLCYQVSPRAKLTPVYLP*FWLKSH
Trigger: ATGAGATTTTAACCAGAACAAAGGCAGATAAACAGG...GGTCAGCTTGGCTCGGGGAGAAACCTGGTAACATAAAAGCAGTTCAGTGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp GAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTTAAGAAGACTCTGCCAGCAGGTACAAAATCAGGTTaGGCCTCCTATGCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: EDVLSGHSPSPVKKTLPAGTKSG*ASYAVG
Trigger: CCCTACTGCATAGGAGGCCAAACCTGATTTTGTACC...TGCTGGCAGAGTCTTCTTAACAGGACTTGGACTGTGACCAGATAAAACATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS GCA 90 bp AATGCAGATGCAGCTGGTACAAACGTCAGGCTTCCAGGACTCAGCTaGCAGGAATATATCCCCTTCATCATTTTTGCAGTAATTAGGTAC +
Preference number: 5 (lower is better)
Translates to: NADAAGTNVRLPGLS*QEYIPFIIFAVIRY
Trigger: GTACCTAATTACTGCAAAAATGATGAAGGGGATATATTCCTGGCAGCTGAGTCCTGGAAGCCTGACGTTTGTACCAGCTGCATCTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000413985.1
CDS CCA 90 bp AATCTTCAGGACAACGTGGAGAGAACTGGACTTCACAGCGGGCCTTaGAGCAATCTGGCTTCTCTTCTTCAATTCTCTTTAAAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: NLQDNVERTGLHSGP*SNLASLLQFSLKLK
Trigger: TTTCAGCTTTAAAGAGAATTGAAGAAGAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAGCACTTTCACAGGGTTaGTGCAGGTCTGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEALSQG*CRSVRR
Trigger: TCTGCGGACAGACCTGCACAAACCCTGTGAAAGTGC...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTACAACTTCCTTCCACGTaGATGGGCTCAACACAGGGC +
Preference number: 5 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVQLPST*MGSTQG
Trigger: GCCCTGTGTTGAGCCCATCAACGTGGAAGGAAGTTG...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp GAAGATGTTTTATCTGGTCACAGTCCAAGTCCTGTTAAGAAGACTCTGCCAGCATCTTCCCCCATATCCTaGACCACTAGAGGGTACAAA +
Preference number: 5 (lower is better)
Translates to: EDVLSGHSPSPVKKTLPASSPIS*TTRGYK
Trigger: TTTGTACCCTCTAGTGGTCAAGGATATGGGGGAAGA...TGCTGGCAGAGTCTTCTTAACAGGACTTGGACTGTGACCAGATAAAACATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413985.1
CDS TCA 90 bp TGTCTGCCTGTAGATGGTTCTGTTTTTGCATGCTGTAGAAGCCACTaGATCTTGCATCTGGTTCTGCAATTCTTAGCATTCTCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: CLPVDGSVFACCRSH*ILHLVLQFLAFSGN
Trigger: GTTCCCAGAGAATGCTAAGAATTGCAGAACCAGATGCAAGATTCAGTGGCTTCTACAGCATGCAAAAACAGAACCATCTACAGGCAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp GTTCTGCAATTCTTAGCATTCTCTGGGAACTGTCCACCTGGACTCTaGTTCCTTTCTTGCAGTCCACAGATACTAGCTGATTATTTAAGG +
Preference number: 5 (lower is better)
Translates to: VLQFLAFSGNCPPGL*FLSCSPQILADYLR
Trigger: CCTTAAATAATCAGCTAGTATCTGTGGACTGCAAGAAAGGAACCAGAGTCCAGGTGGACAGTTCCCAGAGAATGCTAAGAATTGCAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATGACACTCGCATCTTGTaGGCAAAGTACAGCAACCAT +
Preference number: 5 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYDTRIL*AKYSNH
Trigger: ATGGTTGCTGTACTTTGCCAACAAGATGCGAGTGTC...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATGGCACACCACCTTCTTaGGAATTGTGTCTTCTATGC +
Preference number: 5 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYGTPPS*ELCLLC
Trigger: GCATAGAAGACACAATTCCAAAGAAGGTGGTGTGCC...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATGTGAAGAATCTTCACTaGGGTGCAGCCTGTTATCTC +
Preference number: 5 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYVKNLH*GAACYL
Trigger: GAGATAACAGGCTGCACCCAAGTGAAGATTCTTCAC...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp CACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAGAAGGCACATATCCTGACTaGGAAACTCAAAGGGATTGC +
Preference number: 5 (lower is better)
Translates to: HTHTYSHTHIFPIKLQVEGTYPD*ETQRDC
Trigger: GCAATCCCTTTGAGTTTCCAAGTCAGGATATGTGCC...TTCTACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTACGACAGAACCGACAGTaGTCCATTCGAAACATGTCT +
Preference number: 5 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVRQNRQ*SIRNMS
Trigger: AGACATGTTTCGAATGGACAACTGTCGGTTCTGTCG...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp CAAACTCACTGTCCCCACCCCAAATATCTCTACAGCTATCTTACAGGCAAATATTTCTCAATGGGTATATaGGTTGGTTCTGGGACATAC +
Preference number: 5 (lower is better)
Translates to: QTHCPHPKYLYSYLTGKYFSMGI*VGSGTY
Trigger: GTATGTCCCAGAACCAACCAATATACCCATTGAGAA...ATATTTGCCTGTAAGATAGCTGTAGAGATATTTGGGGTGGGGACAGTGAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTAACAGATCTCACAGTTTaGGGCATCAGTAAGGAAACC +
Preference number: 5 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVTDLTV*GISKET
Trigger: GGTTTCCTTACTGATGCCCAAAACTGTGAGATCTGT...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAACATTTCTGGACACATaGGGCAGCAACTTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGTFLDT*GSNFLP
Trigger: TGGAAGGAAGTTGCTGCCCAATGTGTCCAGAAATGT...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGAACTCTGGTTCCTTTCTaGCAGTCCACAGATACTAGC +
Preference number: 5 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGTLVPF*QSTDTS
Trigger: GCTAGTATCTGTGGACTGCAAGAAAGGAACCAGAGT...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 90 bp TTTCCCATTGATTATATTGCAGCCAGCAATAAGGTTTTCATTGCATaGTTTAAAACCAAGCAGTTGGTCATCAGTCCAGTTCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: FPIDYIAASNKVFIA*FKTKQLVISPVLIF
Trigger: GAAGATGAGAACTGGACTGATGACCAACTGCTTGGTTTTAAACCATGCAATGAAAACCTTATTGCTGGCTGCAATATAATCAATGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGACCAAGTGGACAATACTaGTCACAGATTATGGGTCTG +
Preference number: 5 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGPSGQY*SQIMGL
Trigger: CAGACCCATAATCTGTGACAAGTATTGTCCACTTGG...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGACCACCTTCTTTGGAATaGTGTCTTCTATGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGPPSLE*CLLCSR
Trigger: CCTACTGCATAGAAGACACAATTCCAAAGAAGGTGG...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGACCTCTCCTCGATGGTTaGTCTTCTCAATGGGTATAT +
Preference number: 5 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGPLLDG*SSQWVY
Trigger: ATATACCCATTGAGAAGACAAACCATCGAGGAGAGG...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ACACACACACATACATACTCTCACACACACATCTTTCCAATTAAACTGCAGGTATTCCCATTGATTATATaGCAGCCAGCAATAAGGTTT +
Preference number: 5 (lower is better)
Translates to: THTHTYSHTHIFPIKLQVFPLII*QPAIRF
Trigger: AAACCTTATTGCTGGCTGCAATATAATCAATGGGAA...TACCTGCAGTTTAATTGGAAAGATGTGTGTGTGAGAGTATGTATGTGTGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 90 bp GTTGGTGTTCGATACCAGCAAAGCAGTGGTATCCACTGTTTCTTCTaGTTGATGAATAGGAATGCTATTATAATAGAGAGGCATATAATT +
Preference number: 5 (lower is better)
Translates to: VGVRYQQSSGIHCFF*LMNRNAIIIERHII
Trigger: AATTATATGCCTCTCTATTATAATAGCATTCCTATTCATCAATCAGAAGAAACAGTGGATACCACTGCTTTGCTGGTATCGAACACCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS-3UTR CAA 90 bp ATACAGTCAGTTATATTTGAGGCATACTACAACAAACTTCCAGCTTATTGTGGACATTCACATTTCCCATaGATTATATTGCAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: IQSVIFEAYYNKLPAYCGHSHFP*IILQPA
Trigger: TGCTGGCTGCAATATAATCAATGGGAAATGTGAATG...TCCACAATAAGCTGGAAGTTTGTTGTAGTATGCCTCAAATATAACTGACTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 72 bp CGATGCTCCCCGGGCAGTTCCTGGGCTCCTCGCACTTaGACTCGTCACAGGGCAGGCAGACCAGCGCCCGGG +
Preference number: 6 (lower is better)
Translates to: RCSPGSSWAPRT*TRHRAGRPAPG
Trigger: CCCGGGCGCTGGTCTGCCTGCCCTGTGACGAGTCCAAGTGCGAGGAGCCCAGGAACTGCCCGGGGAGCATCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000619935.1
CDS GCA 72 bp CGCACGTGTAGCAGCAGCCGCAGACGCCCTGCACGATaGTCCCCGGGCAGTTCCTGGGCTCCTCGCACTTGG +
Preference number: 6 (lower is better)
Translates to: RTCSSSRRRPAR*SPGSSWAPRTW
Trigger: CCAAGTGCGAGGAGCCCAGGAACTGCCCGGGGAGCATCGTGCAGGGCGTCTGCGGCTGCTGCTACACGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000619935.1
CDS GCA 72 bp GCAGCCCCCGGTCGCAGGTTCCGTAAATCCCGAAGGTaGCGCCGCAGCTCTCGTTCCTCTGGCTGGCGCACG +
Preference number: 6 (lower is better)
Translates to: AAPGRRFRKSRR*RRSSRSSGWRT
Trigger: CGTGCGCCAGCCAGAGGAACGAGAGCTGCGGCGGCACCTTCGGGATTTACGGAACCTGCGACCGGGGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280527.7
ENST00000426856.1
ENST00000428774.1
ENST00000613124.1
ENST00000619072.1
ENST00000619935.1
CDS CCA 72 bp CGCAGACGCCCTGCACGATGCTCCCCGGGCAGTTCCTaGGCTCCTCGCACTTGGACTCGTCACAGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: RRRPARCSPGSS*APRTWTRHRAG
Trigger: GCCTGCCCTGTGACGAGTCCAAGTGCGAGGAGCCCAGGAACTGCCCGGGGAGCATCGTGCAGGGCGTCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000619935.1
CDS CCA 72 bp TCCCGAAGGTGCCGCCGCAGCTCTCGTTCCTCTGGCTaGCGCACGTGTAGCAGCAGCCGCAGACGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: SRRCRRSSRSSG*RTCSSSRRRPA
Trigger: TGCAGGGCGTCTGCGGCTGCTGCTACACGTGCGCCAGCCAGAGGAACGAGAGCTGCGGCGGCACCTTCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280527.7
ENST00000426856.1
ENST00000613124.1
ENST00000619935.1
CDS CAA 72 bp ACGATGCTCCCCGGGCAGTTCCTGGGCTCCTCGCACTaGGACTCGTCACAGGGCAGGCAGACCAGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: TMLPGQFLGSSH*DSSQGRQTSAR
Trigger: CCGGGCGCTGGTCTGCCTGCCCTGTGACGAGTCCAAGTGCGAGGAGCCCAGGAACTGCCCGGGGAGCATCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000619935.1
CDS GCA 72 bp CCGGCTGGCAGACTTTGCGCAGACAGCCTGCGGGGTTaGACACGCAGCGGCTGGGTAAGGGACAGCACTCCC +
Preference number: 6 (lower is better)
Translates to: PAGRLCADSLRG*TRSGWVRDSTP
Trigger: GGGAGTGCTGTCCCTTACCCAGCCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CAA 72 bp CCCGGCTGGCAGACTTTGCGCAGACAGCCTGCGGGGTaGCACACGCAGCGGCTGGGTAAGGGACAGCACTCC +
Preference number: 6 (lower is better)
Translates to: PGWQTLRRQPAG*HTQRLGKGQHS
Trigger: GGAGTGCTGTCCCTTACCCAGCCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS GCA 72 bp AGCAGAGGGTCTGGCCCTGCAGGCAGTAGCAGTGGGTaGAGCTGTCAAGGTCCCACCGCTCCTCGTCGGCAT +
Preference number: 6 (lower is better)
Translates to: SRGSGPAGSSSG*SCQGPTAPRRH
Trigger: ATGCCGACGAGGAGCGGTGGGACCTTGACAGCTGCACCCACTGCTACTGCCTGCAGGGCCAGACCCTCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp TTCAGGTTTCCCGGCTGGCAGACTTTGCGCAGACAGCCTGCGGGGTaGCACACGCAGCGGCTGGGTAAGGGACAGCACTCCCCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: FRFPGWQTLRRQPAG*HTQRLGKGQHSPGG
Trigger: TCCTCCTGGGGAGTGCTGTCCCTTACCCAGCCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS TCA 72 bp GTCCGCAGACGGTCGCAACGCAGTGGCGTTCACCGTTaGCGCACTGGCAGAATGTGCAGTCGTCTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: VRRRSQRSGVHR*RTGRMCSRLPA
Trigger: GGCGGGAAGACGACTGCACATTCTGCCAGTGCGTCAACGGTGAACGCCACTGCGTTGCGACCGTCTGCGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS CAA 90 bp GTGCAGGTCTGTCCGCAGACGGTCGCAACGCAGTGGCGTTCACCGTaGACGCACTGGCAGAATGTGCAGTCGTCTTCCCGCCACCGGTCT +
Preference number: 6 (lower is better)
Translates to: VQVCPQTVATQWRSP*THWQNVQSSSRHRS
Trigger: AGACCGGTGGCGGGAAGACGACTGCACATTCTGCCAGTGCGTCAACGGTGAACGCCACTGCGTTGCGACCGTCTGCGGACAGACCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS GCA 72 bp CAGGGCAACACTCCCCAGGCACTTTCACAGGGTTTGTaGAGGTCTGTCCGCAGACGGTCGCAACGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: QGNTPQALSQGL*RSVRRRSQRSG
Trigger: GCCACTGCGTTGCGACCGTCTGCGGACAGACCTGCACAAACCCTGTGAAAGTGCCTGGGGAGTGTTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS CCA 72 bp ACGGTCGCAACGCAGTGGCGTTCACCGTTGACGCACTaGCAGAATGTGCAGTCGTCTTCCCGCCACCGGTCT +
Preference number: 6 (lower is better)
Translates to: TVATQWRSPLTH*QNVQSSSRHRS
Trigger: AGACCGGTGGCGGGAAGACGACTGCACATTCTGCCAGTGCGTCAACGGTGAACGCCACTGCGTTGCGACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS CAA 72 bp TGTCCGCAGACGGTCGCAACGCAGTGGCGTTCACCGTaGACGCACTGGCAGAATGTGCAGTCGTCTTCCCGC +
Preference number: 6 (lower is better)
Translates to: CPQTVATQWRSP*THWQNVQSSSR
Trigger: GCGGGAAGACGACTGCACATTCTGCCAGTGCGTCAACGGTGAACGCCACTGCGTTGCGACCGTCTGCGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS GCA 72 bp ACACTAGTATGTTCAGGTTTCCCGGCTGGCAGACTTTaGGCAGACAGCCTGCGGGGTTGCACACGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: TLVCSGFPAGRL*ADSLRGCTRSG
Trigger: GCCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGAACATACTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CAA 72 bp GACACTAGTATGTTCAGGTTTCCCGGCTGGCAGACTTaGCGCAGACAGCCTGCGGGGTTGCACACGCAGCGG +
Preference number: 6 (lower is better)
Translates to: DTSMFRFPGWQT*RRQPAGLHTQR
Trigger: CCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGAACATACTAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CAA 90 bp GTTCTTCGCACACAGGGCAACACTCCCCAGGCACTTTCACAGGGTTaGTGCAGGTCTGTCCGCAGACGGTCGCAACGCAGTGGCGTTCAC +
Preference number: 6 (lower is better)
Translates to: VLRTQGNTPQALSQG*CRSVRRRSQRSGVH
Trigger: GTGAACGCCACTGCGTTGCGACCGTCTGCGGACAGACCTGCACAAACCCTGTGAAAGTGCCTGGGGAGTGTTGCCCTGTGTGCGAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS GCA 72 bp AGCACTTTCCAGGTGTCCCATCGCCACGAGAGACTATaGGGGGAGTGGATCCCACCTCACACACGGGGAAAC +
Preference number: 6 (lower is better)
Translates to: STFQVSHRHERL*GEWIPPHTRGN
Trigger: GTTTCCCCGTGTGTGAGGTGGGATCCACTCCCCGCATAGTCTCTCGTGGCGATGGGACACCTGGAAAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CCA 72 bp CAGGTGTCCCATCGCCACGAGAGACTATGCGGGGAGTaGATCCCACCTCACACACGGGGAAACCACATAAGC +
Preference number: 6 (lower is better)
Translates to: QVSHRHERLCGE*IPPHTRGNHIS
Trigger: GCTTATGTGGTTTCCCCGTGTGTGAGGTGGGATCCACTCCCCGCATAGTCTCTCGTGGCGATGGGACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CCA 72 bp TTTGTGCAGGTCTGTCCGCAGACGGTCGCAACGCAGTaGCGTTCACCGTTGACGCACTGGCAGAATGTGCAG +
Preference number: 6 (lower is better)
Translates to: FVQVCPQTVATQ*RSPLTHWQNVQ
Trigger: CTGCACATTCTGCCAGTGCGTCAACGGTGAACGCCACTGCGTTGCGACCGTCTGCGGACAGACCTGCACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS CAA 72 bp ACACAGGGCAACACTCCCCAGGCACTTTCACAGGGTTaGTGCAGGTCTGTCCGCAGACGGTCGCAACGCAGT +
Preference number: 6 (lower is better)
Translates to: TQGNTPQALSQG*CRSVRRRSQRS
Trigger: ACTGCGTTGCGACCGTCTGCGGACAGACCTGCACAAACCCTGTGAAAGTGCCTGGGGAGTGTTGCCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000481321.1
CDS CAA 90 bp GAGGCTTTTGACACTAGTATGTTCAGGTTTCCCGGCTGGCAGACTTaGCGCAGACAGCCTGCGGGGTTGCACACGCAGCGGCTGGGTAAG +
Preference number: 6 (lower is better)
Translates to: EAFDTSMFRFPGWQT*RRQPAGLHTQRLGK
Trigger: CTTACCCAGCCGCTGCGTGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGAACATACTAGTGTCAAAAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CCA 72 bp CCACACTGGGCGGTGAAGCAGATGGCAACGCCCCCTTaGCATCGACAGAACCGACAGTTGTCCATTCGAAAC +
Preference number: 6 (lower is better)
Translates to: PHWAVKQMATPP*HRQNRQLSIRN
Trigger: GTTTCGAATGGACAACTGTCGGTTCTGTCGATGCCAAGGGGGCGTTGCCATCTGCTTCACCGCCCAGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 72 bp AGTACCTCTCGCAGTTTATCTCACCACACTGGGCGGTaGAGCAGATGGCAACGCCCCCTTGGCATCGACAGA +
Preference number: 6 (lower is better)
Translates to: STSRSLSHHTGR*SRWQRPLGIDR
Trigger: TCTGTCGATGCCAAGGGGGCGTTGCCATCTGCTTCACCGCCCAGTGTGGTGAGATAAACTGCGAGAGGTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 72 bp GTCTCACACAGCACCCGTCCGCTGTGGCAGGTGCACTaGGTACAGGAGTCAATGTTCCACGTTTCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: VSHSTRPLWQVH*VQESMFHVSPS
Trigger: GGAAGGAGAAACGTGGAACATTGACTCCTGTACTCAGTGCACCTGCCACAGCGGACGGGTGCTGTGTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000413985.1
CDS TCA 72 bp GGTCCCACCGCTCCTCGTCGGCATAGGCCTTCCCACTaGAGTGGCACACCACCTTCTTTGGAATTGTGTCTT +
Preference number: 6 (lower is better)
Translates to: GPTAPRRHRPSH*SGTPPSLELCL
Trigger: AAGACACAATTCCAAAGAAGGTGGTGTGCCACTTCAGTGGGAAGGCCTATGCCGACGAGGAGCGGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 72 bp GATCACCTGCACTCCAGCCGCCTTACGTTAGAGCTGTaGGCTTCATCCAGAGTATGGCCCAGGCACCTCAGA +
Preference number: 6 (lower is better)
Translates to: DHLHSSRLTLEL*ASSRVWPRHLR
Trigger: TCTGAGGTGCCTGGGCCATACTCTGGATGAAGCTCACAGCTCTAACGTAAGGCGGCTGGAGTGCAGGTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477491.5
CDS GCA 72 bp CCTCTGTCTCACACAGCACCCGTCCGCTGTGGCAGGTaGACTGAGTACAGGAGTCAATGTTCCACGTTTCTC +
Preference number: 6 (lower is better)
Translates to: PLSHTAPVRCGR*TEYRSQCSTFL
Trigger: GAGAAACGTGGAACATTGACTCCTGTACTCAGTGCACCTGCCACAGCGGACGGGTGCTGTGTGAGACAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000413985.1
CDS CCA 72 bp GAGGCTTTTGACACTAGTATGTTCAGGTTTCCCGGCTaGCAGACTTTGCGCAGACAGCCTGCGGGGTTGCAC +
Preference number: 6 (lower is better)
Translates to: EAFDTSMFRFPG*QTLRRQPAGLH
Trigger: GTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGAACATACTAGTGTCAAAAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CCA 72 bp GACAACGTGGAGAGAACTGGACTTCACAGCGGGCCTTaGAGCAATCTGGCTTCTCTTCTTCGCAAACGCCCG +
Preference number: 6 (lower is better)
Translates to: DNVERTGLHSGP*SNLASLLRKRP
Trigger: CGGGCGTTTGCGAAGAAGAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426856.1
CDS CAA 72 bp GGACAACGTGGAGAGAACTGGACTTCACAGCGGGCCTaGGAGCAATCTGGCTTCTCTTCTTCGCAAACGCCC +
Preference number: 6 (lower is better)
Translates to: GQRGENWTSQRA*EQSGFSSSQTP
Trigger: GGGCGTTTGCGAAGAAGAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426856.1
CDS TCA 72 bp GCAGAGGCCTCTCTGCACTTGCAGATAAGACAGCCGTaGCTGTCCTGCTGGAAACCCAAGGGGCAGATCTTA +
Preference number: 6 (lower is better)
Translates to: AEASLHLQIRQP*LSCWKPKGQIL
Trigger: TAAGATCTGCCCCTTGGGTTTCCAGCAGGACAGTCACGGCTGTCTTATCTGCAAGTGCAGAGAGGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS GCA 72 bp ACGCGGTCTGCTGAACAGGAGGGCATTCCACAGTCCTaGAGTCCACGCCGAAAACTGGTTTGCACTCATAGA +
Preference number: 6 (lower is better)
Translates to: TRSAEQEGIPQS*SPRRKLVCTHR
Trigger: TCTATGAGTGCAAACCAGTTTTCGGCGTGGACTGCAGGACTGTGGAATGCCCTCCTGTTCAGCAGACCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CAA 90 bp TCTGCACTTCTTGGGCCTTGGGCGGCACTCACAGATCTCACAGTTTaGGGCATCAGTAAGGAAACCGAAGGGACAGTTCAAGGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SALLGPWAALTDLTV*GISKETEGTVQGAA
Trigger: GGCTGCACCTTGAACTGTCCCTTCGGTTTCCTTACTGATGCCCAAAACTGTGAGATCTGTGAGTGCCGCCCAAGGCCCAAGAAGTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp GAATCTTCAGGACAACGTGGAGAGAACTGGACTTCACAGCGGGCCTaGGAGCAATCTGGCTTCTCTTCTTCGCAAACGCCCGCTTCGTAC +
Preference number: 6 (lower is better)
Translates to: ESSGQRGENWTSQRA*EQSGFSSSQTPASY
Trigger: GTACGAAGCGGGCGTTTGCGAAGAAGAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426856.1
CDS TCA 72 bp AGCTCTCCTCATTTTTATGATGATGACCATCCACGGTaGGACAAGTGCCCGACAGGATGGGTGGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: SSPHFYDDDHPR*DKCPTGWVAQL
Trigger: CAGCTGGGCCACCCATCCTGTCGGGCACTTGTCTCACCGTGGATGGTCATCATCATAAAAATGAGGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 72 bp AATCTGGAACACAGAGACCGCCTTACGTTAGAGCTGTaGGCTTCATCCAGAGTATGGCCCAGGCACCTCAGA +
Preference number: 6 (lower is better)
Translates to: NLEHRDRLTLEL*ASSRVWPRHLR
Trigger: TCTGAGGTGCCTGGGCCATACTCTGGATGAAGCTCACAGCTCTAACGTAAGGCGGTCTCTGTGTTCCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473403.5
ENST00000497236.1
CDS CCA 72 bp CTTGTCACAGATTATGGGTCTGCACTTCTTGGGCCTTaGGCGGCACTCACAGATCTCACAGTTTTGGGCATC +
Preference number: 6 (lower is better)
Translates to: LVTDYGSALLGP*AALTDLTVLGI
Trigger: GATGCCCAAAACTGTGAGATCTGTGAGTGCCGCCCAAGGCCCAAGAAGTGCAGACCCATAATCTGTGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 72 bp CTTGGGCCTTGGGCGGCACTCACAGATCTCACAGTTTaGGGCATCAGTAAGGAAACCGAAGGGACAGTTCAA +
Preference number: 6 (lower is better)
Translates to: LGPWAALTDLTV*GISKETEGTVQ
Trigger: TTGAACTGTCCCTTCGGTTTCCTTACTGATGCCCAAAACTGTGAGATCTGTGAGTGCCGCCCAAGGCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp GCGTGGGCCACAGGGGAACCTCCAGGTCAACCTCTCCTCGATGGTTaGTCTTCTCAATGGGTATATTGGTTGGTTCTGGGACATACATTT +
Preference number: 6 (lower is better)
Translates to: AWATGEPPGQPLLDG*SSQWVYWLVLGHTF
Trigger: AAATGTATGTCCCAGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGAGAGGTTGACCTGGAGGTTCCCCTGTGGCCCACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 72 bp TTGTTGGCAAAGTACAGCAACCATCTGCAGTTAGTCTaGCTTGAGTTTCATAGCTGTCCGGGGGACACGCGG +
Preference number: 6 (lower is better)
Translates to: LLAKYSNHLQLV*LEFHSCPGDTR
Trigger: CCGCGTGTCCCCCGGACAGCTATGAAACTCAAGTCAGACTAACTGCAGATGGTTGCTGTACTTTGCCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS TCA 72 bp GTCCTGCTGGAAACCCAAGGGGCAGATCTTACTGCATaGGAGCTCTGGACATTTCTTACAGCGACAGATGTC +
Preference number: 6 (lower is better)
Translates to: VLLETQGADLTA*ELWTFLTATDV
Trigger: GACATCTGTCGCTGTAAGAAATGTCCAGAGCTCTCATGCAGTAAGATCTGCCCCTTGGGTTTCCAGCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS GCA 72 bp GACTGTCCTGCTGGAAACCCAAGGGGCAGATCTTACTaGATGAGAGCTCTGGACATTTCTTACAGCGACAGA +
Preference number: 6 (lower is better)
Translates to: DCPAGNPRGRSY*MRALDISYSDR
Trigger: TCTGTCGCTGTAAGAAATGTCCAGAGCTCTCATGCAGTAAGATCTGCCCCTTGGGTTTCCAGCAGGACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 72 bp ATAACCCTCGATCAGAACAGAATCTTCAGGACAACGTaGAGAGAACTGGACTTCACAGCGGGCCTTGGAGCA +
Preference number: 6 (lower is better)
Translates to: ITLDQNRIFRTT*RELDFTAGLGA
Trigger: TGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATTCTGTTCTGATCGAGGGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000426856.1
CDS CCA 72 bp GGCCACAGGGGAACCTCCAGGTCAACCTCTCCTCGATaGTTTGTCTTCTCAATGGGTATATTGGTTGGTTCT +
Preference number: 6 (lower is better)
Translates to: GHRGTSRSTSPR*FVFSMGILVGS
Trigger: AGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGAGAGGTTGACCTGGAGGTTCCCCTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp ATGTCACAGCCGTGCTTATTCTTCAGCAATCCAAGTGGACAATACTaGTCACAGATTATGGGTCTGCACTTCTTGGGCCTTGGGCGGCAC +
Preference number: 6 (lower is better)
Translates to: MSQPCLFFSNPSGQY*SQIMGLHFLGLGRH
Trigger: GTGCCGCCCAAGGCCCAAGAAGTGCAGACCCATAATCTGTGACAAGTATTGTCCACTTGGATTGCTGAAGAATAAGCACGGCTGTGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp TGGGAACCACAACTGAGGCAATGGAGTCCAGTGAAGAATCTTCACTaGGGTGCAGCCTGTTATCTCTGTAATCTACCTGGAGGTGACCCA +
Preference number: 6 (lower is better)
Translates to: WEPQLRQWSPVKNLH*GAACYLCNLPGGDP
Trigger: TGGGTCACCTCCAGGTAGATTACAGAGATAACAGGCTGCACCCAAGTGAAGATTCTTCACTGGACTCCATTGCCTCAGTTGTGGTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 72 bp GGACAATACTTGTCACAGATTATGGGTCTGCACTTCTaGGGCCTTGGGCGGCACTCACAGATCTCACAGTTT +
Preference number: 6 (lower is better)
Translates to: GQYLSQIMGLHF*GLGRHSQISQF
Trigger: AAACTGTGAGATCTGTGAGTGCCGCCCAAGGCCCAAGAAGTGCAGACCCATAATCTGTGACAAGTATTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 72 bp ACAGGGGAACCTCCAGGTCAACCTCTCCTCGATGGTTaGTCTTCTCAATGGGTATATTGGTTGGTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: TGEPPGQPLLDG*SSQWVYWLVLG
Trigger: TCCCAGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGAGAGGTTGACCTGGAGGTTCCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS GCA 72 bp GCAGCTGGTACAAACGTCAGGCTTCCAGGACTCAGCTaGCAGGAATATATCCCCTTCATCATTTTTGCAGTA +
Preference number: 6 (lower is better)
Translates to: AAGTNVRLPGLS*QEYIPFIIFAV
Trigger: TACTGCAAAAATGATGAAGGGGATATATTCCTGGCAGCTGAGTCCTGGAAGCCTGACGTTTGTACCAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280527.7
ENST00000413985.1
CDS CCA 72 bp GACAATACTTGTCACAGATTATGGGTCTGCACTTCTTaGGCCTTGGGCGGCACTCACAGATCTCACAGTTTT +
Preference number: 6 (lower is better)
Translates to: DNTCHRLWVCTS*ALGGTHRSHSF
Trigger: AAAACTGTGAGATCTGTGAGTGCCGCCCAAGGCCCAAGAAGTGCAGACCCATAATCTGTGACAAGTATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp GCAGCCAGCAATAAGGTTTTCATTGCATGGTTTAAAACCAAGCAGTaGGTCATCAGTCCAGTTCTCATCTTCGCAAACGCCCGCTTCGTA +
Preference number: 6 (lower is better)
Translates to: AASNKVFIAWFKTKQ*VISPVLIFANARFV
Trigger: TACGAAGCGGGCGTTTGCGAAGATGAGAACTGGACTGATGACCAACTGCTTGGTTTTAAACCATGCAATGAAAACCTTATTGCTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp GAATCTTCAGGACAACGTGGAGAGAACTGGACTTCACAGCGGGCCTaGGAGCAATCTGGCTTCTCTTCTTCAATTCTCTTTAAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: ESSGQRGENWTSQRA*EQSGFSSSILFKAE
Trigger: TTCAGCTTTAAAGAGAATTGAAGAAGAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp GGTCAACCTCTCCTCGATGGTTTGTCTTCTCAATGGGTATATTGGTaGGTTCTGGGACATACATTTCTGGACACATTGGGCAGCAACTTC +
Preference number: 6 (lower is better)
Translates to: GQPLLDGLSSQWVYW*VLGHTFLDTLGSNF
Trigger: GAAGTTGCTGCCCAATGTGTCCAGAAATGTATGTCCCAGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGAGAGGTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 72 bp CAACTGAGGCAATGGAGTCCAGTGAAGAATCTTCACTaGGGTGCAGCCTGTTATCTCTGTAATCTACCTGGA +
Preference number: 6 (lower is better)
Translates to: QLRQWSPVKNLH*GAACYLCNLPG
Trigger: TCCAGGTAGATTACAGAGATAACAGGCTGCACCCAAGTGAAGATTCTTCACTGGACTCCATTGCCTCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS GCA 72 bp TCTGGGAACTGTCCACCTGGACTCTGGTTCCTTTCTTaGAGTCCACAGATACTAGCTGATTATTTAAGGAAG +
Preference number: 6 (lower is better)
Translates to: SGNCPPGLWFLS*SPQILADYLRK
Trigger: CTTCCTTAAATAATCAGCTAGTATCTGTGGACTGCAAGAAAGGAACCAGAGTCCAGGTGGACAGTTCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 72 bp CCAGGTCAACCTCTCCTCGATGGTTTGTCTTCTCAATaGGTATATTGGTTGGTTCTGGGACATACATTTCTG +
Preference number: 6 (lower is better)
Translates to: PGQPLLDGLSSQ*VYWLVLGHTFL
Trigger: CAGAAATGTATGTCCCAGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGAGAGGTTGACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 72 bp CCGTGCTTATTCTTCAGCAATCCAAGTGGACAATACTaGTCACAGATTATGGGTCTGCACTTCTTGGGCCTT +
Preference number: 6 (lower is better)
Translates to: PCLFFSNPSGQY*SQIMGLHFLGL
Trigger: AAGGCCCAAGAAGTGCAGACCCATAATCTGTGACAAGTATTGTCCACTTGGATTGCTGAAGAATAAGCACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 72 bp CTCCTCGATGGTTTGTCTTCTCAATGGGTATATTGGTaGGTTCTGGGACATACATTTCTGGACACATTGGGC +
Preference number: 6 (lower is better)
Translates to: LLDGLSSQWVYW*VLGHTFLDTLG
Trigger: GCCCAATGTGTCCAGAAATGTATGTCCCAGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 72 bp TGGACCATTTGGGGGACCATTTGTTCCTCTTTGAGATaGGCAGTAATGCTGAGAGCAGCCTCAAATTCAATA +
Preference number: 6 (lower is better)
Translates to: WTIWGTICSSLR*AVMLRAASNSI
Trigger: TATTGAATTTGAGGCTGCTCTCAGCATTACTGCTCATCTCAAAGAGGAACAAATGGTCCCCCAAATGGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000428774.1
ENST00000473403.5
ENST00000477491.5
ENST00000497236.1
CDS GCA 72 bp GGCACATATCCTGACTTGGAAACTCAAAGGGATTGCTaGAGGTTCGAATGGTGTTACATTCACATTTCCCAT +
Preference number: 6 (lower is better)
Translates to: GTYPDLETQRDC*RFEWCYIHISH
Trigger: ATGGGAAATGTGAATGTAACACCATTCGAACCTGCAGCAATCCCTTTGAGTTTCCAAGTCAGGATATGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CCA 72 bp TCCTCGATGGTTTGTCTTCTCAATGGGTATATTGGTTaGTTCTGGGACATACATTTCTGGACACATTGGGCA +
Preference number: 6 (lower is better)
Translates to: SSMVCLLNGYIG*FWDIHFWTHWA
Trigger: TGCCCAATGTGTCCAGAAATGTATGTCCCAGAACCAACCAATATACCCATTGAGAAGACAAACCATCGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 72 bp ACTCTGGTTCCTTTCTTGCAGTCCACAGATACTAGCTaGTTATTTAAGGAAGAAGGCTTAGTTGGTGTTCGA +
Preference number: 6 (lower is better)
Translates to: TLVPFLQSTDTS*LFKEEGLVGVR
Trigger: TCGAACACCAACTAAGCCTTCTTCCTTAAATAATCAGCTAGTATCTGTGGACTGCAAGAAAGGAACCAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS TCA 72 bp GTAGATGGTTCTGTTTTTGCATGCTGTAGAAGCCACTaGATCTTGCATCTGGTTCTGCAATTCTTAGCATTC +
Preference number: 6 (lower is better)
Translates to: VDGSVFACCRSH*ILHLVLQFLAF
Trigger: GAATGCTAAGAATTGCAGAACCAGATGCAAGATTCAGTGGCTTCTACAGCATGCAAAAACAGAACCATCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp TCACATTTCCCATTGATTATATTGCAGCCAGCAATAAGGTTTTCATaGCATGGTTTAAAACCAAGCAGTTGGTCATCAGTCCAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: SHFPLIILQPAIRFS*HGLKPSSWSSVQFS
Trigger: TGAGAACTGGACTGATGACCAACTGCTTGGTTTTAAACCATGCAATGAAAACCTTATTGCTGGCTGCAATATAATCAATGGGAAATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 90 bp CTGCAGGTTCGAATGGTGTTACATTCACATTTCCCATTGATTATATaGCAGCCAGCAATAAGGTTTTCATTGCATGGTTTAAAACCAAGC +
Preference number: 6 (lower is better)
Translates to: LQVRMVLHSHFPLII*QPAIRFSLHGLKPS
Trigger: GCTTGGTTTTAAACCATGCAATGAAAACCTTATTGCTGGCTGCAATATAATCAATGGGAAATGTGAATGTAACACCATTCGAACCTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 72 bp CCATTGATTATATTGCAGCCAGCAATAAGGTTTTCATaGCATGGTTTAAAACCAAGCAGTTGGTCATCAGTC +
Preference number: 6 (lower is better)
Translates to: PLIILQPAIRFS*HGLKPSSWSSV
Trigger: GACTGATGACCAACTGCTTGGTTTTAAACCATGCAATGAAAACCTTATTGCTGGCTGCAATATAATCAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280527.7
CDS CAA 72 bp CGAATGGTGTTACATTCACATTTCCCATTGATTATATaGCAGCCAGCAATAAGGTTTTCATTGCATGGTTTA +
Preference number: 6 (lower is better)
Translates to: RMVLHSHFPLII*QPAIRFSLHGL
Trigger: TAAACCATGCAATGAAAACCTTATTGCTGGCTGCAATATAATCAATGGGAAATGTGAATGTAACACCATTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280527.7