RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRHR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000106113

Ensembl transcript IDs: ENST00000341843.8, ENST00000348438.8, ENST00000423776.1, ENST00000445981.5, ENST00000452278.5, ENST00000462882.1, ENST00000471646.6, ENST00000506074.6

Found 796 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTaGGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTGACTTGGCAGAA +
Preference number: 1 (lower is better)
Translates to: AGCGAVPRPSRPAAA*GEGVGVRARRDLAE
Trigger: TTCTGCCAAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR GCA 90 bp AGCCAGCGCCAGGCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTaGCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGG +
Preference number: 1 (lower is better)
Translates to: SQRQAAVGLQQAVEQ*RVHRVPQPRAEREW
Trigger: CCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCCTGGCGCTGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR GCA 90 bp CGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTaGCCTGGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAG +
Preference number: 1 (lower is better)
Translates to: RLRCRDTGTEAKPGS*PGGQLRGHVYPAHQ
Trigger: CTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CCA 90 bp ACTCCTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTaGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTCTACCCTGC +
Preference number: 1 (lower is better)
Translates to: TPAAPLQGHRDGSQA*KLPWWSTEGPCLPC
Trigger: GCAGGGTAGACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTaGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCC +
Preference number: 1 (lower is better)
Translates to: PLQGHRDGSQAWKLP*WSTEGPCLPCPPDS
Trigger: GGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 90 bp ACTGATCCTTTGCTGGCGTACCCCACCCAACTGCAGGGGCACCACTaGGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTG +
Preference number: 1 (lower is better)
Translates to: TDPLLAYPTQLQGHH*VWRPRASAGPHHCL
Trigger: CAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCCCCTGCAGTTGGGTGGGGTACGCCAGCAAAGGATCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 90 bp GGACAGGCCCTGGCTTGCTGGATGAGCTGCACACCTCCTCCAGGCTaGATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTATTAGCC +
Preference number: 1 (lower is better)
Translates to: GQALACWMSCTPPPG*IKLPLVGGWGQVLA
Trigger: GGCTAATACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 90 bp GATAAGGCAGCCAAACTGATCCTTTGCTGGCGTACCCCACCCAACTaGAGGGGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGC +
Preference number: 1 (lower is better)
Translates to: DKAAKLILCWRTPPN*RGTTECGGQGPVQG
Trigger: GCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCCCCTGCAGTTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGCTGCCTTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 90 bp GCAAATGCCTGCAGACATCTGACTGGCTCTTCTCAGGGGGTCCTGTaGATTCCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCAC +
Preference number: 1 (lower is better)
Translates to: ANACRHLTGSSQGVL*IPSASSCAEPGGPH
Trigger: GTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGGAATTCACAGGACCCCCTGAGAAGAGCCAGTCAGATGTCTGCAGGCATTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 90 bp ACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTaGCTTGACCTGAGGGGAGGCCACTTCCAAGAGGCATGGTTTATT +
Preference number: 1 (lower is better)
Translates to: TQPRSLAHTTLRVPG*LDLRGGHFQEAWFI
Trigger: AATAAACCATGCCTCTTGGAAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 90 bp AGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATaGGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTG +
Preference number: 1 (lower is better)
Translates to: RFQSLGLWDRPWLAG*AAHLLQAESSCPWL
Trigger: CAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 90 bp GCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTTaGCCTGAGGGGAGGCCACTTCCAAGAGGCATGGTTTATTTCACA +
Preference number: 1 (lower is better)
Translates to: ATILGPHHSSGAWVT*PEGRPLPRGMVYFT
Trigger: TGTGAAATAAACCATGCCTCTTGGAAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CCA 90 bp CTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTaGCTCTTCTCAGGGGGTCCTGTGAATTCCCTCTGCTTCCTCTTG +
Preference number: 1 (lower is better)
Translates to: LAREAGMGKCLQTSD*LFSGGPVNSLCFLL
Trigger: CAAGAGGAAGCAGAGGGAATTCACAGGACCCCCTGAGAAGAGCCAGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 90 bp GATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTTGACCTaGGGGGAGGCCACTTCCAAGAGGCATGGTTTATTTCACAGAGAG +
Preference number: 1 (lower is better)
Translates to: DPWPTPLFGCLGDLT*GEATSKRHGLFHRE
Trigger: CTCTCTGTGAAATAAACCATGCCTCTTGGAAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 90 bp GCATTGGTTTCTTTTGGAAGAAATGGCCTGATGCTTCTCTCTCCCTaGCTCCTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAG +
Preference number: 1 (lower is better)
Translates to: ALVSFGRNGLMLLSP*LLRLRCRDTGTEAK
Trigger: CTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAGGAGTCAGGGAGAGAGAAGCATCAGGCCATTTCTTCCAAAAGAAACCAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 90 bp GGGCCAGGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTaGAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAG +
Preference number: 1 (lower is better)
Translates to: GPGISLVGVIRDRPA*RCFDHKDSKPTRGQ
Trigger: CTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CCA 90 bp CCTCCTCCATGCCTCTGCTCCTCATTTTGCCCCGCACGATGCAACTaGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGATT +
Preference number: 1 (lower is better)
Translates to: PPPCLCSSFCPARCN*LTKDVASLMASSLI
Trigger: AATCAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAGGCATGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 90 bp CGGCACCAGACCTCATTGCTCTCGTGCACTTCATGGTCAACGAGCTaGAGCAGGAACCACATGACATTTCGCAGGATAAAGGTGGTGATG +
Preference number: 1 (lower is better)
Translates to: RHQTSLLSCTSWSTS*SRNHMTFRRIKVVM
Trigger: CATCACCACCTTTATCCTGCGAAATGTCATGTGGTTCCTGCTGCAGCTCGTTGACCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR GCA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTaGTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: GISLVGVIRDRPACR*FDHKDSKPTRGQRE
Trigger: CTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 90 bp ACTTCCTCTGCTTGTCATCCAAAATGGGCTCACACTGTGAGTAGTTaGTCTTTGAGGCCCACGTCCCATTCTCCAAGCATTCTCGATAGG +
Preference number: 1 (lower is better)
Translates to: TSSACHPKWAHTVSS*SLRPTSHSPSILDR
Trigger: CCTATCGAGAATGCTTGGAGAATGGGACGTGGGCCTCAAAGATCAACTACTCACAGTGTGAGCCCATTTTGGATGACAAGCAGAGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR CCA 90 bp GGTCCCTGTCTTCAGGCCAAGGCTCTCTTCCCATTTGACCAACCCTaGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTATC +
Preference number: 1 (lower is better)
Translates to: GPCLQAKALFPFDQP*HMCVCCIEELFQGI
Trigger: GATACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCCTTGGCCTGAAGACAGGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423776.1
ENST00000452278.5
3UTR-3UTR GCA 90 bp GGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTGCGGGGCCAGCACGTTCCGAGCAGTCCCCCTTGGCTaGCGCACCCCCTCTTTCCTG +
Preference number: 2 (lower is better)
Translates to: GTASPRGLRQRCGASTFRAVPLG*RTPSFL
Trigger: CAGGAAAGAGGGGGTGCGGCAGCCAAGGGGGACTGC...TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp GGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTGCGGGGCCAGCACGTTCCGAGCACCCCCTCTTTCCTaGCAGGCTGGAGAGCTGGTC +
Preference number: 2 (lower is better)
Translates to: GTASPRGLRQRCGASTFRAPPLS*QAGELV
Trigger: GACCAGCTCTCCAGCCTGGCAGGAAAGAGGGGGTGC...TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp GGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTGCGGGGCCAGCACGTTCCGACTCATCCCTGTCCCTTaGAGTCCCCCTTGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: GTASPRGLRQRCGASTFRLIPVP*SPPWLP
Trigger: CGGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAG...TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp TTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGAGAGGGAGTGGGAGTaGGCGCCCGGCGTGACTTGG +
Preference number: 2 (lower is better)
Translates to: LASSRLWSSAASIASRSREREWE*APGVTW
Trigger: CCAAGTCACGCCGGGCGCGCACTCCCACTCCCTCTC...GCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR-3UTR GCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTAGGACAGGGGAGCTGTaGAGGTGGGCGACCGAGGGG +
Preference number: 2 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPRTGEL*RWATEG
Trigger: CCCCTCGGTCGCCCACCTGCACAGCTCCCCTGTCCT...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGCAGTCCCCCTTGGCTaGCGCACCCCCTCTTTCCTG +
Preference number: 2 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPAVPLG*RTPSFL
Trigger: CAGGAAAGAGGGGGTGCGGCAGCCAAGGGGGACTGC...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACCCAAGGCGGGAGGATaGCTGGGGAGGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: PTRGQRERELARGQGPSPPKAGG*LGRGHR
Trigger: CCTGTGTCCCCTCCCCAGCCATCCTCCCGCCTTGGG...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCATGCTTCCTCTTGCGCTaGGCCTGGTGGCCCCCACTC +
Preference number: 2 (lower is better)
Translates to: PTRGQRERELARGQGPSPCFLLR*AWWPPL
Trigger: GAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCA...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTTCGGGTGCCTGGGTaGCTTGACCTGAGGGGAGGC +
Preference number: 2 (lower is better)
Translates to: PTRGQRERELARGQGPSPLRVPG*LDLRGG
Trigger: GCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAG...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTAGGACAGGGGAGCTGTaGAGGTGGGCGACCGAGGGG +
Preference number: 2 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLRTGEL*RWATEG
Trigger: CCCCTCGGTCGCCCACCTGCACAGCTCCCCTGTCCT...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGGCAGTCCCCCTTGGCTaGCGCACCCCCTCTTTCCTG +
Preference number: 2 (lower is better)
Translates to: WKPASFMEPPRREDGWGGAVPLG*RTPSFL
Trigger: CAGGAAAGAGGGGGTGCGGCAGCCAAGGGGGACTGC...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGGCAGTCCCCCTTGGCTaGCGCACCCCCTCTTTCCTG +
Preference number: 2 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWAVPLG*RTPSFL
Trigger: CAGGAAAGAGGGGGTGCGGCAGCCAAGGGGGACTGC...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCAGGGCTCCGGCAGCGCTaGGGGGCCAGCACGTTCCGA +
Preference number: 2 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSGLRQR*GASTFR
Trigger: TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCC...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGGCGGCCACCAGGGCTaGCACAGATACGCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLGGHQG*HRYAVA
Trigger: GGCCACTGCGTATCTGTGGCAGCCCTGGTGGCCGCC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR CCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTCCCTTGGTTGGGGGCTaGGGCCAGGTATTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPPLVGG*GQVLAW
Trigger: CCAGGCTAATACCTGGCCCCAGCCCCCAACCAAGGG...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGACCCTTGGTTGGGGGCTaGGGCCAGGTATTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRPLVGG*GQVLAW
Trigger: CCAGGCTAATACCTGGCCCCAGCCCCCAACCAAGGG...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTGCATAATCTCAGCACTTaGGGAAGCCAAGGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: HRVPQPRAEREWECAPGVHNLST*GSQGRQ
Trigger: CTGCCTACCTTGGCTTCCCCAAGTGCTGAGATTATG...CACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR-3UTR TCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCTGCTTCCTCTTGCGCTaGGCCTGGTGGCCCCCACTC +
Preference number: 2 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGCFLLR*AWWPPL
Trigger: GAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCA...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTGCTTCCTCTTGCGCTaGGCCTGGTGGCCCCCACTC +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLCFLLR*AWWPPL
Trigger: GAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGGGAGTGGGCTCTCTTCCCATTTaGCCAACCCTGGCATATGTG +
Preference number: 2 (lower is better)
Translates to: AVPRPSRPAAACGEGVGVGSLPI*PTLAYV
Trigger: CACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCC...CACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAAGGACAGGGGAGCTGTaGAGGTGGGCGACCGAGGGG +
Preference number: 2 (lower is better)
Translates to: SASSCAEPGGPHSSLSLARTGEL*RWATEG
Trigger: CCCCTCGGTCGCCCACCTGCACAGCTCCCCTGTCCT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGATCCCCTCCCATCTCCTaGCCCACGAGAGCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: ERKPGLEACILHGAPKAGSPPIS*PTRACP
Trigger: TGGGCAGGCTCTCGTGGGGCAGGAGATGGGAGGGGA...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGACCTGGCCAGAGAGGCTaGGATGGGCAAATGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRPGQRG*DGQMPA
Trigger: TGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGG...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTGGCCCAGTAAGGCCCTaGCCAGAGAGGCTGGGATGG +
Preference number: 2 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGGPVRP*PERLGW
Trigger: CCATCCCAGCCTCTCTGGCCAGGGCCTTACTGGGCC...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGCCCAAGGCGGGAGGATaGCTGGGGAGGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: AHQIPEPWPLGQALACWMPKAGG*LGRGHR
Trigger: CCTGTGTCCCCTCCCCAGCCATCCTCCCGCCTTGGG...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTCAGAGCCTTGGCCTTTaGGACAGGCCCTGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPQSLGL*DRPWLA
Trigger: AGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTG...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAAGGGTGGGGTACAAGTaGGCCTCTCTAGGTGACAGC +
Preference number: 2 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRRVGYK*ASLGDS
Trigger: GCTGTCACCTAGAGAGGCTCACTTGTACCCCACCCT...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTGCCCCACGAGAGCCTaGCCAGCACAGAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLCPTRA*PAQRTQ
Trigger: CTGGGTTCTCTGTGCTGGGCAGGCTCTCGTGGGGCA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGTCCCCTCCCATCTCCTaGCCCACGAGAGCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRSPPIS*PTRACP
Trigger: TGGGCAGGCTCTCGTGGGGCAGGAGATGGGAGGGGA...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATCCCCTCCCATCTCCTaGCCCACGAGAGCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: SASSCAEPGGPHSSLSLASPPIS*PTRACP
Trigger: TGGGCAGGCTCTCGTGGGGCAGGAGATGGGAGGGGA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGCACCCCCTCTTTCCTaGCAGGCTGGAGAGCTGGTC +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLAPPLS*QAGELV
Trigger: GACCAGCTCTCCAGCCTGGCAGGAAAGAGGGGGTGC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCTCATCCCTGTCCCTTaGAGTCCCCCTTGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGLIPVP*SPPWLP
Trigger: CGGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAG...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTGCAGGGCCACACCATTaGCTGGCTGCTGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGAGPHH*LAAGSM
Trigger: CATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGC...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGCGTACCCCACCCAACTaGAGGGGCACCACTGAGTGT +
Preference number: 2 (lower is better)
Translates to: WKPASFMEPPRREDGWGGRTPPN*RGTTEC
Trigger: ACACTCAGTGGTGCCCCTGCAGTTGGGTGGGGTACG...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCCTTGCAGTCCCCCTTaGCTGCCGCACCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLPCSPP*LPHPLF
Trigger: AAAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp ACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCTGCTGCCTTGCAGTCCCCCTTaGCTGCCGCACCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: TECGGQGPVQGHTIAWLLPCSPP*LPHPLF
Trigger: AAAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGG...CAGCAGCCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGAGCCTGCATCCTTCATaGAGCCCCCAAGGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLSLHPS*SPQGGR
Trigger: CCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCATGCTTCCTCTTGCGCTaGGCCTGGTGGCCCCCACTC +
Preference number: 2 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSCFLLR*AWWPPL
Trigger: GAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCA...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR TCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGGTGCCTGGGTGACTTaGCCTGAGGGGAGGCCACTT +
Preference number: 2 (lower is better)
Translates to: ERELARGQGPSPLRKMDVGAWVT*PEGRPL
Trigger: AAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACC...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTACACCTCCTCCAGGCTaGATCAAGCTGCCCTTGGTT +
Preference number: 2 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPTPPPG*IKLPLV
Trigger: AACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGT...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTAGGACAGGGGAGCTGTaGAGGTGGGCGACCGAGGGG +
Preference number: 2 (lower is better)
Translates to: VRPWPERLGWANACRHLTRTGEL*RWATEG
Trigger: CCCCTCGGTCGCCCACCTGCACAGCTCCCCTGTCCT...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGTGCCCCACGAGAGCCTaGCCAGCACAGAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: AHQIPEPWPLGQALACWMCPTRA*PAQRTQ
Trigger: CTGGGTTCTCTGTGCTGGGCAGGCTCTCGTGGGGCA...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGCTCATCCCTGTCCCTTaGAGTCCCCCTTGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRLIPVP*SPPWLP
Trigger: CGGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAG...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGGCAGGGCCACACCATTaGCTGGCTGCTGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: AHQIPEPWPLGQALACWMAGPHH*LAAGSM
Trigger: CATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGC...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGCAGGGCCACACCATTaGCTGGCTGCTGGCTCCATG +
Preference number: 2 (lower is better)
Translates to: QERKPGLEACILHGAPKAAGPHH*LAAGSM
Trigger: CATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGC...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGGAGGCCAAGGGCCAGTaGAGGGCCACACCATTGCCT +
Preference number: 2 (lower is better)
Translates to: AHQIPEPWPLGQALACWMEAKGQ*RATPLP
Trigger: AGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTC...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGACGTACCCCACCCAACTaGAGGGGCACCACTGAGTGT +
Preference number: 2 (lower is better)
Translates to: ERKPGLEACILHGAPKAGRTPPN*RGTTEC
Trigger: ACACTCAGTGGTGCCCCTGCAGTTGGGTGGGGTACG...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACGGGCCATGTCTACCCTaGCCACCAGATTCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNGPCLP*PPDSRA
Trigger: GGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCC...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGACTGCAGACATCTGACTaGCTCTTCTCAGGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRLQTSD*LFSGGP
Trigger: AGGACCCCCTGAGAAGAGCCAGTCAGATGTCTGCAG...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGACCTGGCCAGAGAGGCTaGGATGGGCAAATGCCTGCA +
Preference number: 2 (lower is better)
Translates to: ERKPGLEACILHGAPKAGPGQRG*DGQMPA
Trigger: TGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGG...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGGGCCCAGTAAGGCCCTaGCCAGAGAGGCTGGGATGG +
Preference number: 2 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWGPVRP*PERLGW
Trigger: CCATCCCAGCCTCTCTGGCCAGGGCCTTACTGGGCC...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGAGCCTGCATCCTTCATaGAGCCCCCAAGGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: ERELARGQGPSPLRKMDVSLHPS*SPQGGR
Trigger: CCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCT...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GCCGTTGAAGTACTCGGGGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTGCGCATAATCTCAGCACTTaGGGAAGCCAAGGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: AVEVLGARPLHEGSGSAAHNLST*GSQGRQ
Trigger: CTGCCTACCTTGGCTTCCCCAAGTGCTGAGATTATG...CGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCCCCGAGTACTTCAACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR CAA 90 bp AGCTGTGCAGGTGGGCGACCGAGGGGTCACACAGCGGCCGTCTGCTaGATGCTGTGGAAGCTGATCCGTGTGGGTGATGTAGGGATGGAC +
Preference number: 2 (lower is better)
Translates to: SCAGGRPRGHTAAVC*MLWKLIRVGDVGMD
Trigger: GTCCATCCCTACATCACCCACACGGATCAGCTTCCACAGCATCAAGCAGACGGCCGCTGTGTGACCCCTCGGTCGCCCACCTGCACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452278.5
ENST00000506074.6
3UTR-3UTR TCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGTGCCTGGGTGACTTaGCCTGAGGGGAGGCCACTT +
Preference number: 2 (lower is better)
Translates to: DELHTSSRLNQAALGWGLGAWVT*PEGRPL
Trigger: AAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACC...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCATGCCCCACGAGAGCCTaGCCAGCACAGAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSCPTRA*PAQRTQ
Trigger: CTGGGTTCTCTGTGCTGGGCAGGCTCTCGTGGGGCA...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGCACCCCCTCTTTCCTaGCAGGCTGGAGAGCTGGTC +
Preference number: 2 (lower is better)
Translates to: DELHTSSRLNQAALGWGLAPPLS*QAGELV
Trigger: GACCAGCTCTCCAGCCTGGCAGGAAAGAGGGGGTGC...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTCGTACCCCACCCAACTaGAGGGGCACCACTGAGTGT +
Preference number: 2 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCRTPPN*RGTTEC
Trigger: ACACTCAGTGGTGCCCCTGCAGTTGGGTGGGGTACG...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTCTGCTCCTCATTTTaGCCCGCACGATGCAACTGG +
Preference number: 2 (lower is better)
Translates to: PTRGQRERELARGQGPSPLCSSF*PARCNW
Trigger: CCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAG...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCGCCTCCCTCCTCCATaGCTCTGCTCCTCATTTTGC +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLRLPPP*LCSSFC
Trigger: GCAAAATGAGGAGCAGAGGCATGGAGGAGGGAGGCG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTCTTTCCTGCCAGGCTaGAGAGCTGGTCTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLSFLPG*RAGLSP
Trigger: AGGGGAGAGACCAGCTCTCCAGCCTGGCAGGAAAGA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCACCTTGCAGTCCCCCTTaGCTGCCGCACCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSPCSPP*LPHPLF
Trigger: AAAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGG...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR CCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGCCTTGCAGTCCCCCTTaGCTGCCGCACCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWPCSPP*LPHPLF
Trigger: AAAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGG...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACTGCAGACATCTGACTaGCTCTTCTCAGGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSLQTSD*LFSGGP
Trigger: AGGACCCCCTGAGAAGAGCCAGTCAGATGTCTGCAG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAAAACTGATCCTTTGCTaGCGTACCCCACCCAACTGC +
Preference number: 2 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRKLILC*RTPPNC
Trigger: GCAGTTGGGTGGGGTACGCCAGCAAAGGATCAGTTT...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CCAGGCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTATCCATTCGGATTCTTaGCCAGGTGCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PGCSWPPAGCGAVPRPSRIHSDS*PGAVAH
Trigger: GTGAGCCACTGCACCTGGCCAAGAATCCGAATGGAT...ACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCCTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR CAA 90 bp TGCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTaGCTGGATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: CPPDSRALAFGTGPG*LDELHTSSRLNQAA
Trigger: GGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTCTGCAGGGGCACCACTaGGTGTGGAGGCCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRLQGHH*VWRPRA
Trigger: GGCCCTTGGCCTCCACACTCAGTGGTGCCCCTGCAG...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTAGGGTGGGGTACAAGTaGGCCTCTCTAGGTGACAGC +
Preference number: 2 (lower is better)
Translates to: SDPATILGPHHSSGAWVTRVGYK*ASLGDS
Trigger: GCTGTCACCTAGAGAGGCTCACTTGTACCCCACCCT...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GGTGGCCTTCACTGCCTTCCTGTACTGGATTGTCTCGGATGTGGTGGACGCGCGAGTGGCCCAGGTAGTTaGCGACAAGGGCGATGCGGT +
Preference number: 2 (lower is better)
Translates to: GGLHCLPVLDCLGCGGRASGPGS*RQGRCG
Trigger: ACCGCATCGCCCTTGTCGTCAACTACCTGGGCCACT...CGCGCGTCCACCACATCCGAGACAATCCAGTACAGGAAGGCAGTGAAGGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp AATGATGGGGCCTTGGTAGATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAAAGGACAGGGGAGCTGTaGAGGTGGGCGACCGAGGGG +
Preference number: 2 (lower is better)
Translates to: NDGALVDVVHQVARLLAKRTGEL*RWATEG
Trigger: CCCCTCGGTCGCCCACCTGCACAGCTCCCCTGTCCT...TTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATCTACCAAGGCCCCATCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTGCACCCCCTCTTTCCTaGCAGGCTGGAGAGCTGGTC +
Preference number: 2 (lower is better)
Translates to: VRPWPERLGWANACRHLTAPPLS*QAGELV
Trigger: GACCAGCTCTCCAGCCTGGCAGGAAAGAGGGGGTGC...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCGCTGGGATGGGCAAATaGCTGCAGACATCTGACTGG +
Preference number: 2 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGAGMGK*LQTSDW
Trigger: CCAGTCAGATGTCTGCAGGCATTTGCCCATCCCAGC...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCGCCAAACTGATCCTTTaGTGGCGTACCCCACCCAAC +
Preference number: 2 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGAKLIL*WRTPPN
Trigger: GTTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGC...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACCTCTGCTCCTCATTTTaGCCCGCACGATGCAACTGG +
Preference number: 2 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNLCSSF*PARCNW
Trigger: CCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAG...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGACCAGAGAGGCTGGGATaGGCAAATGCCTGCAGACAT +
Preference number: 2 (lower is better)
Translates to: ERKPGLEACILHGAPKAGPERLG*ANACRH
Trigger: ATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGG...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCAGAGAGGCTGGGATaGGCAAATGCCTGCAGACAT +
Preference number: 2 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGPERLG*ANACRH
Trigger: ATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGG...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGCCTGGCCAGAGAGGCTaGGATGGGCAAATGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWPGQRG*DGQMPA
Trigger: TGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGG...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACCTAGGTGACAGCCCCTaGGATAAGGCAGCCAAACTG +
Preference number: 2 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNLGDSP*DKAAKL
Trigger: CAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAG...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGCCCGCACGATGCAACTaGTTGACTAAGGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: WKPASFMEPPRREDGWGGPARCN*LTKDVA
Trigger: AGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGG...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGATAAGGCAGCCAAACTaGTCCTTTGCTGGCGTACCC +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLIRQPN*SFAGVP
Trigger: GGGTACGCCAGCAAAGGATCAGTTTGGCTGCCTTAT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGAGGGTGGGGTACAAGTaGGCCTCTCTAGGTGACAGC +
Preference number: 2 (lower is better)
Translates to: DELHTSSRLNQAALGWGLRVGYK*ASLGDS
Trigger: GCTGTCACCTAGAGAGGCTCACTTGTACCCCACCCT...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTCACGATGCAACTGGTTaGCTAAGGATGTGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGHDATG*LRMWLP
Trigger: GGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTG...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCTTCGGGTGCCTGGGTaGCTTGACCTGAGGGGAGGC +
Preference number: 2 (lower is better)
Translates to: GISLVGVIRDRPACRCFDLRVPG*LDLRGG
Trigger: GCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAG...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCTCCCCTCCCATCTCCTaGCCCACGAGAGCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: DVVHQVARLLAKPALFILSPPIS*PTRACP
Trigger: TGGGCAGGCTCTCGTGGGGCAGGAGATGGGAGGGGA...GAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGCTGGGATGGGCAAATaGCTGCAGACATCTGACTGG +
Preference number: 2 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRAGMGK*LQTSDW
Trigger: CCAGTCAGATGTCTGCAGGCATTTGCCCATCCCAGC...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTGCTGGGATGGGCAAATaGCTGCAGACATCTGACTGG +
Preference number: 2 (lower is better)
Translates to: SDPATILGPHHSSGAWVTAGMGK*LQTSDW
Trigger: CCAGTCAGATGTCTGCAGGCATTTGCCCATCCCAGC...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCAGGCGTCTTCCTTGATTaGCTAATCTGTGGACTAGGC +
Preference number: 2 (lower is better)
Translates to: PTRGQRERELARGQGPSPGVFLD*LICGLG
Trigger: GCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCC...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGGCACCAGACCTCATTaGTCTCGTGCACTTCATGGT +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLGTRPH*SRALHG
Trigger: ACCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR CCA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCATCTTTCCTGCCAGGCTaGAGAGCTGGTCTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSSFLPG*RAGLSP
Trigger: AGGGGAGAGACCAGCTCTCCAGCCTGGCAGGAAAGA...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR CCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGTCTTTCCTGCCAGGCTaGAGAGCTGGTCTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWSFLPG*RAGLSP
Trigger: AGGGGAGAGACCAGCTCTCCAGCCTGGCAGGAAAGA...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAAATAGCTGTGTGTGTTaGACAGGTCCTTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRNSCVC*TGPSLL
Trigger: GAGCAGAGAAGGACCTGTCCAACACACACAGCTATT...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTACACAGGAACAAGGGTaGGGTACAAGTGAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGTQEQG*GTSEPL
Trigger: GAGAGGCTCACTTGTACCCCACCCTTGTTCCTGTGT...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGATCCATTCGGATTCTTaGCCAGGTGCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLIHSDS*PGAVAH
Trigger: GTGAGCCACTGCACCTGGCCAAGAATCCGAATGGAT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR TCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTCACGATGCAACTGGTTaGCTAAGGATGTGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: SDPATILGPHHSSGAWVTHDATG*LRMWLP
Trigger: GGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTG...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GGGCAGGGGAGCCCTGTGTCTGCTACTATAAATAGCTGTGTGTGTTGGACAGGTTCCCCTCCCATCTCCTaGCCCACGAGAGCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: GQGSPVSATINSCVCWTGSPPIS*PTRACP
Trigger: TGGGCAGGCTCTCGTGGGGCAGGAGATGGGAGGGGA...ACCTGTCCAACACACACAGCTATTTATAGTAGCAGACACAGGGCTCCCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGCCAAACTGATCCTTTaGTGGCGTACCCCACCCAAC +
Preference number: 2 (lower is better)
Translates to: DELHTSSRLNQAALGWGLAKLIL*WRTPPN
Trigger: GTTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGC...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTCATGGTCAACGAGCTaGAGCAGGAACCACATGACA +
Preference number: 2 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLSWSTS*SRNHMT
Trigger: TGTCATGTGGTTCCTGCTGCAGCTCGTTGACCATGA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR CCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTCCTTGCAGTCCCCCTTaGCTGCCGCACCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRPCSPP*LPHPLF
Trigger: AAAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGG...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGGGCCCAGTAAGGCCCTaGCCAGAGAGGCTGGGATGG +
Preference number: 2 (lower is better)
Translates to: ARCNWLTKDVASLMASSLGPVRP*PERLGW
Trigger: CCATCCCAGCCTCTCTGGCCAGGGCCTTACTGGGCC...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGACACAGGAACAAGGGTaGGGTACAAGTGAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: ERELARGQGPSPLRKMDVTQEQG*GTSEPL
Trigger: GAGAGGCTCACTTGTACCCCACCCTTGTTCCTGTGT...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTCCCGCACGATGCAACTaGTTGACTAAGGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: SDPATILGPHHSSGAWVTPARCN*LTKDVA
Trigger: AGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGG...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGTGCCCCACGAGAGCCTaGCCAGCACAGAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: ARCNWLTKDVASLMASSLCPTRA*PAQRTQ
Trigger: CTGGGTTCTCTGTGCTGGGCAGGCTCTCGTGGGGCA...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCTGCCCCACGAGAGCCTaGCCAGCACAGAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVCPTRA*PAQRTQ
Trigger: CTGGGTTCTCTGTGCTGGGCAGGCTCTCGTGGGGCA...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGGCACCCCCTCTTTCCTaGCAGGCTGGAGAGCTGGTC +
Preference number: 2 (lower is better)
Translates to: ARCNWLTKDVASLMASSLAPPLS*QAGELV
Trigger: GACCAGCTCTCCAGCCTGGCAGGAAAGAGGGGGTGC...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGAGGGACAGACCCGCCTaGAGGTGCTTTGACCATAAA +
Preference number: 2 (lower is better)
Translates to: DELHTSSRLNQAALGWGLRDRPA*RCFDHK
Trigger: TTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCT...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGAGCCTGCATCCTTCATaGAGCCCCCAAGGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: ARCNWLTKDVASLMASSLSLHPS*SPQGGR
Trigger: CCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCT...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCAGTGATGAGGTTCCAGTaGATCACATTCCGCAGACAG +
Preference number: 2 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSVMRFQ*ITFRRQ
Trigger: CTGTCTGCGGAATGTGATTCACTGGAACCTCATCAC...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTTTTTGCCCCGCACGATaGAACTGGTTGACTAAGGAT +
Preference number: 2 (lower is better)
Translates to: SDPATILGPHHSSGAWVTFCPAR*NWLTKD
Trigger: ATCCTTAGTCAACCAGTTGCATCGTGCGGGGCAAAA...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGAATAGCTGTGTGTGTTaGACAGGTCCTTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: ERELARGQGPSPLRKMDVNSCVC*TGPSLL
Trigger: GAGCAGAGAAGGACCTGTCCAACACACACAGCTATT...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACAATCACTGAAGACATaGTTGGTTTCTGCTATTCCC +
Preference number: 2 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSQSLKT*LVSAIP
Trigger: GGGAATAGCAGAAACCAACCATGTCTTCAGTGATTG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGAGGGCAAAGGGCAATaGGGTATGAGTTTCAATCAC +
Preference number: 2 (lower is better)
Translates to: ERELARGQGPSPLRKMDVEGKGQ*GMSFNH
Trigger: GTGATTGAAACTCATACCCCATTGCCCTTTGCCCTC...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCCAGAGCCTTGGCCTTTaGGACAGGCCCTGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSQSLGL*DRPWLA
Trigger: AGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTG...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CAA 90 bp CCTCCATGCCTCTGCTCCTCATTTTGCCCCGCACGATGCAACTGGTaGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGATTGCC +
Preference number: 2 (lower is better)
Translates to: PPCLCSSFCPARCNW*TKDVASLMASSLIA
Trigger: GGCAATCAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAGGCATGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAAGGGCCAGTaGAGGGCCACACCATTGCCT +
Preference number: 2 (lower is better)
Translates to: LTIKTPNLPEVRERENWPEAKGQ*RATPLP
Trigger: AGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTC...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGTTTTGCCCCGCACGATaGAACTGGTTGACTAAGGAT +
Preference number: 2 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWFCPAR*NWLTKD
Trigger: ATCCTTAGTCAACCAGTTGCATCGTGCGGGGCAAAA...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCCCTCCTCCATGCCTCTaGTCCTCATTTTGCCCCGCA +
Preference number: 2 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVPPPCL*SSFCPA
Trigger: TGCGGGGCAAAATGAGGAGCAGAGGCATGGAGGAGG...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCCCTCCTCCATGCCTCTaGTCCTCATTTTGCCCCGCA +
Preference number: 2 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSPPPCL*SSFCPA
Trigger: TGCGGGGCAAAATGAGGAGCAGAGGCATGGAGGAGG...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCCGCCTCCCTCCTCCATaGCTCTGCTCCTCATTTTGC +
Preference number: 2 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSRLPPP*LCSSFC
Trigger: GCAAAATGAGGAGCAGAGGCATGGAGGAGGGAGGCG...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCCGCCTCCCTCCTCCATaGCTCTGCTCCTCATTTTGC +
Preference number: 2 (lower is better)
Translates to: PDGVFLDCLICGLGREGVRLPPP*LCSSFC
Trigger: GCAAAATGAGGAGCAGAGGCATGGAGGAGGGAGGCG...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCTCTTTCCTGCCAGGCTaGAGAGCTGGTCTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSSFLPG*RAGLSP
Trigger: AGGGGAGAGACCAGCTCTCCAGCCTGGCAGGAAAGA...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCTCTTTCCTGCCAGGCTaGAGAGCTGGTCTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: PDGVFLDCLICGLGREGVSFLPG*RAGLSP
Trigger: AGGGGAGAGACCAGCTCTCCAGCCTGGCAGGAAAGA...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGAATAGCTGTGTGTGTTaGACAGGTCCTTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: DELHTSSRLNQAALGWGLNSCVC*TGPSLL
Trigger: GAGCAGAGAAGGACCTGTCCAACACACACAGCTATT...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCATGAGTTTCAATCACTaGAGACATGGTTGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGMSFNH*RHGWFL
Trigger: CAGAAACCAACCATGTCTTCAGTGATTGAAACTCAT...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCCCTCTTCCTCACGGCTaGGCGCACCTGATTGCTTGG +
Preference number: 2 (lower is better)
Translates to: LTIKTPNLPEVRERENWPPLPHG*AHLIAW
Trigger: CCAAGCAATCAGGTGCGCTCAGCCGTGAGGAAGAGG...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506074.6
3UTR-3UTR CCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCCCAGAGAGGCTGGGATaGGCAAATGCCTGCAGACAT +
Preference number: 2 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVPERLG*ANACRH
Trigger: ATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGG...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCCCCAAGGCGGGAGGATaGCTGGGGAGGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRPKAGG*LGRGHR
Trigger: CCTGTGTCCCCTCCCCAGCCATCCTCCCGCCTTGGG...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACGGGTACCTAGAGCATTaGTTTCTTTTGGAAGAAATG +
Preference number: 2 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNGYLEH*FLLEEM
Trigger: CATTTCTTCCAAAAGAAACCAATGCTCTAGGTACCC...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CAA 90 bp GGGCAAAGGGCAATGGGGTATGAGTTTCAATCACTGAAGACATGGTaGGTTTCTGCTATTCCCATCCCACGCCTCCCTCCTCCATGCCTC +
Preference number: 2 (lower is better)
Translates to: GQRAMGYEFQSLKTW*VSAIPIPRLPPPCL
Trigger: GAGGCATGGAGGAGGGAGGCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATACCCCATTGCCCTTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCATAAGGCAGCCAAACTaGTCCTTTGCTGGCGTACCC +
Preference number: 2 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSIRQPN*SFAGVP
Trigger: GGGTACGCCAGCAAAGGATCAGTTTGGCTGCCTTAT...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGAAACTGATCCTTTGCTaGCGTACCCCACCCAACTGC +
Preference number: 2 (lower is better)
Translates to: ARCNWLTKDVASLMASSLKLILC*RTPPNC
Trigger: GCAGTTGGGTGGGGTACGCCAGCAAAGGATCAGTTT...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGCCCGCACGATGCAACTaGTTGACTAAGGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: ARCNWLTKDVASLMASSLPARCN*LTKDVA
Trigger: AGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGG...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGCAATCACTGAAGACATaGTTGGTTTCTGCTATTCCC +
Preference number: 2 (lower is better)
Translates to: DELHTSSRLNQAALGWGLQSLKT*LVSAIP
Trigger: GGGAATAGCAGAAACCAACCATGTCTTCAGTGATTG...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGCACTTCCAAGAGGCATaGTTTATTTCACAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: DELHTSSRLNQAALGWGLHFQEA*FISQRA
Trigger: TGCTCTCTGTGAAATAAACCATGCCTCTTGGAAGTG...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp CAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCATAGTAGAGCTTGCCGATGGCAGCACGTTCCGATCTaGTCCAAGGTCGTGTTGCAG +
Preference number: 2 (lower is better)
Translates to: QAPCQTSTVHSHSRACRWQHVPI*SKVVLQ
Trigger: CTGCAACACGACCTTGGACCAGATCGGAACGTGCTG...CCATCGGCAAGCTCTACTATGAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCCTCATCCCTGTCCCTTaGAGTCCCCCTTGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRLIPVP*SPPWLP
Trigger: CGGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAG...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR GCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCGAGGCCAAGGGCCAGTaGAGGGCCACACCATTGCCT +
Preference number: 2 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPREAKGQ*RATPLP
Trigger: AGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTC...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp TGTACTGGATTGTCTCGGATGTGGTGGACGCGCGTAACTTTGTCATTAGGATCCCTCTCGTGCACTTCATaGTCAACGAGCTGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: CTGLSRMWWTRVTLSLGSLSCTS*STSCSR
Trigger: CCTGCTGCAGCTCGTTGACCATGAAGTGCACGAGAG...GGATCCTAATGACAAAGTTACGCGCGTCCACCACATCCGAGACAATCCAGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR CCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCGCGCACCTGATTGCTTaGCACACATCTCTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: PDGVFLDCLICGLGREGVAHLIA*HTSLSG
Trigger: TCCAGAAAGAGATGTGTGCCAAGCAATCAGGTGCGC...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506074.6
3UTR-3UTR TCA 90 bp TGTACTGGATTGTCTCGGATGTGGTGGACGCGCGTAACTTTGTCATTAGGATCCGGCTCTCTTCCCATTTaGCCAACCCTGGCATATGTG +
Preference number: 2 (lower is better)
Translates to: CTGLSRMWWTRVTLSLGSGSLPI*PTLAYV
Trigger: CACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCC...GGATCCTAATGACAAAGTTACGCGCGTCCACCACATCCGAGACAATCCAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR GCA 90 bp CAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCATAGTAGAGCTTGCCGATGGACCTCATTGCTCTCGTaGACTTCATGGTCAACGAGC +
Preference number: 2 (lower is better)
Translates to: QAPCQTSTVHSHSRACRWTSLLS*TSWSTS
Trigger: GCTCGTTGACCATGAAGTGCACGAGAGCAATGAGGT...CCATCGGCAAGCTCTACTATGAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR CCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGGAGGGCAAAGGGCAATaGGGTATGAGTTTCAATCAC +
Preference number: 2 (lower is better)
Translates to: ARCNWLTKDVASLMASSLEGKGQ*GMSFNH
Trigger: GTGATTGAAACTCATACCCCATTGCCCTTTGCCCTC...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CAA 90 bp AGGAAAGCCCAGGTCCCTGTCTTCAGGCCAAGGCTCTCTTCCCATTaGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTAT +
Preference number: 2 (lower is better)
Translates to: RKAQVPVFRPRLSSH*TNPGICVCVALRNY
Trigger: ATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCCTTGGCCTGAAGACAGGGACCTGGGCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423776.1
ENST00000452278.5
3UTR-3UTR TCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCACGGCTGAGCGCACCTaGTTGCTTGGCACACATCTC +
Preference number: 2 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRTAERT*LLGTHL
Trigger: GAGATGTGTGCCAAGCAATCAGGTGCGCTCAGCCGT...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506074.6
3UTR-3UTR CCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCCTAGGTGACAGCCCCTaGGATAAGGCAGCCAAACTG +
Preference number: 2 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRLGDSP*DKAAKL
Trigger: CAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAG...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CAA 90 bp GATGTGGTGGACGCGCGTAACTTTGTCATTAGGATCCTGACGATGTaGAACAGAAATACGAAATTGATCAGGAGCACGAGAATGATGGGG +
Preference number: 2 (lower is better)
Translates to: DVVDARNFVIRILTM*NRNTKLIRSTRMMG
Trigger: CCCCATCATTCTCGTGCTCCTGATCAATTTCGTATTTCTGTTCAACATCGTCAGGATCCTAATGACAAAGTTACGCGCGTCCACCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR TCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACAAGGGCAATGGGGTATaGGTTTCAATCACTGAAGAC +
Preference number: 2 (lower is better)
Translates to: GALTIKTPNLPEVRERENKGNGV*VSITED
Trigger: GTCTTCAGTGATTGAAACTCATACCCCATTGCCCTT...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCCACTTCCAAGAGGCATaGTTTATTTCACAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: LTIKTPNLPEVRERENWPHFQEA*FISQRA
Trigger: TGCTCTCTGTGAAATAAACCATGCCTCTTGGAAGTG...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR TCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACATGAGTTTCAATCACTaGAGACATGGTTGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: GALTIKTPNLPEVRERENMSFNH*RHGWFL
Trigger: CAGAAACCAACCATGTCTTCAGTGATTGAAACTCAT...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 72 bp GGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTaGGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTGAC +
Preference number: 3 (lower is better)
Translates to: GAVPRPSRPAAA*GEGVGVRARRD
Trigger: GTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR GCA 72 bp CGGGGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTaGGGGGCCAGCACGTTCCGATCTGGTCCAAGGTCG +
Preference number: 3 (lower is better)
Translates to: RGTASPRGLRQR*GASTFRSGPRS
Trigger: CGACCTTGGACCAGATCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR GCA 72 bp CAGGCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTaGCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAG +
Preference number: 3 (lower is better)
Translates to: QAAVGLQQAVEQ*RVHRVPQPRAE
Trigger: CTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR CCA 72 bp GTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTaGGAGTGCGCGCCCGGCGTGACTTGGCAGAAGAGC +
Preference number: 3 (lower is better)
Translates to: VHRVPQPRAERE*ECAPGVTWQKS
Trigger: GCTCTTCTGCCAAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR-3UTR CAA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGCCCTTGCAGTCCCCCTaGGCTGCCGCACCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: WKPASFMEPPRREDGWGGPLQSP*AAAPPL
Trigger: AAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGGG...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp GGCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCCGCGCCCGGCGTGACTaGGCAGAAGAGCTGAGGAAA +
Preference number: 3 (lower is better)
Translates to: GCSWPPAGCGAVPRPSRPRARRD*AEELRK
Trigger: TTTCCTCAGCTCTTCTGCCAAGTCACGCCGGGCGCG...GGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR-3UTR CAA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACCCCTTGCAGTCCCCCTaGGCTGCCGCACCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNPLQSP*AAAPPL
Trigger: AAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGGG...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 72 bp TTGCTGGCGTACCCCACCCAACTGCAGGGGCACCACTaGGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACAC +
Preference number: 3 (lower is better)
Translates to: LLAYPTQLQGHH*VWRPRASAGPH
Trigger: GTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCCCCTGCAGTTGGGTGGGGTACGCCAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CCA 72 bp AGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATaGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: REEARPGSLHPS*SPQGGRMAGEG
Trigger: CCCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGTGCAGGGCCACACCATaGCCTGGCTGCTGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: WKPASFMEPPRREDGWGGCRATP*PGCWLH
Trigger: ATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGCA...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTCCAGATTCCAGAGCCTaGGCCTTTGGGACAGGCCCT +
Preference number: 3 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPPDSRA*AFGTGP
Trigger: AGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGG...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CCA 72 bp GCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTaGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGT +
Preference number: 3 (lower is better)
Translates to: APLQGHRDGSQA*KLPWWSTEGPC
Trigger: ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGCCCTTGCAGTCCCCCTaGGCTGCCGCACCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWPLQSP*AAAPPL
Trigger: AAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGGG...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAACTCATCCCTGTCCCTaGCAGTCCCCCTTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: ERKPGLEACILHGAPKAGTHPCP*QSPLAA
Trigger: GGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAGT...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGACTCATCCCTGTCCCTaGCAGTCCCCCTTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLTHPCP*QSPLAA
Trigger: GGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAGT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
3UTR TCA 72 bp CTGGCTTGCTGGATGAGCTGCACACCTCCTCCAGGCTaGATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAG +
Preference number: 3 (lower is better)
Translates to: LACWMSCTPPPG*IKLPLVGGWGQ
Trigger: CTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATCCAGCAAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 72 bp GCAGGTGGGCGACCGAGGGGTCACACAGCGGCCGTCTaGTTGATGCTGTGGAAGCTGATCCGTGTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: AGGRPRGHTAAV*LMLWKLIRVGD
Trigger: ATCACCCACACGGATCAGCTTCCACAGCATCAAGCAGACGGCCGCTGTGTGACCCCTCGGTCGCCCACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452278.5
ENST00000506074.6
3UTR CCA 72 bp GCAGAGAAGGGGTCTCCCAAGAGAGGAAGCCAGGCCTaGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGG +
Preference number: 3 (lower is better)
Translates to: AEKGSPKRGSQA*KPASFMEPPRR
Trigger: CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTGGGAGACCCCTTCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CCA 72 bp GGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTaGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: GHRDGSQAWKLP*WSTEGPCLPCP
Trigger: TGGGCAGGGTAGACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGTGCAGGGCCACACCATaGCCTGGCTGCTGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: QERKPGLEACILHGAPKACRATP*PGCWLH
Trigger: ATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGCA...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACCTCTGCTCCTCATTTaGCCCCGCACGATGCAACTG +
Preference number: 3 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSPLLLI*PRTMQL
Trigger: CAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAGG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCCAGATTCCAGAGCCTaGGCCTTTGGGACAGGCCCT +
Preference number: 3 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLPDSRA*AFGTGP
Trigger: AGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp TTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCAGGCTCTCTTCCCATTaGACCAACCCTGGCATATGT +
Preference number: 3 (lower is better)
Translates to: LASSRLWSSAASIASRSRRLSSH*TNPGIC
Trigger: ACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCCT...GCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
3UTR TCA 72 bp CGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTaGCTTGACCTGAGGGGAGGCCACTTCCAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: RSLAHTTLRVPG*LDLRGGHFQEA
Trigger: TGCCTCTTGGAAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 72 bp TGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTaGCCTGGTGGTCAACTGAGGGGCCATGTCTACCCT +
Preference number: 3 (lower is better)
Translates to: CRDTGTEAKPGS*PGGQLRGHVYP
Trigger: AGGGTAGACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTCCTCTGCTCCTCATTTaGCCCCGCACGATGCAACTG +
Preference number: 3 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCPLLLI*PRTMQL
Trigger: CAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAGG...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 72 bp CTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTTaGCCTGAGGGGAGGCCACTTCCAAGAGGCATGGTT +
Preference number: 3 (lower is better)
Translates to: LGPHHSSGAWVT*PEGRPLPRGMV
Trigger: AACCATGCCTCTTGGAAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 72 bp AGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATaGGCTGCACACCTCCTCCAGGCTGAATCAAGCTGC +
Preference number: 3 (lower is better)
Translates to: SLGLWDRPWLAG*AAHLLQAESSC
Trigger: GCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 72 bp CTGCCCTGGTGGTCAACTGAGGGGCCATGTCTACCCTaGCCACCAGATTCCAGAGCCTTGGCCTTTGGGACA +
Preference number: 3 (lower is better)
Translates to: LPWWSTEGPCLP*PPDSRALAFGT
Trigger: TGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGAGCCAAACTGATCCTTaGCTGGCGTACCCCACCCAA +
Preference number: 3 (lower is better)
Translates to: QERKPGLEACILHGAPKASQTDP*LAYPTQ
Trigger: TTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGCT...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp GGTGGCCTTCACTGCCTTCCTGTACTGGATTGTCTCGGATGTGGTGGACGCGCGCGGCACCAGACCTCATaGCTCTCGTGCACTTCATGG +
Preference number: 3 (lower is better)
Translates to: GGLHCLPVLDCLGCGGRARHQTS*LSCTSW
Trigger: CCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCCG...CGCGCGTCCACCACATCCGAGACAATCCAGTACAGGAAGGCAGTGAAGGCCACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR TCA 72 bp CCAGGGCTGCCACAGATACGCAGTGGCCCAGGTAGTTaGCGACAAGGGCGATGCGGTAGTGCAGGTCATACT +
Preference number: 3 (lower is better)
Translates to: PGLPQIRSGPGS*RQGRCGSAGHT
Trigger: AGTATGACCTGCACTACCGCATCGCCCTTGTCGTCAACTACCTGGGCCACTGCGTATCTGTGGCAGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR GCA 72 bp GGGGCCAGCACGTTCCGATCTGGTCCAAGGTCGTGTTaGAGTAGGAGTAGGGACCTTGGCAGAAGAGCTGAG +
Preference number: 3 (lower is better)
Translates to: GASTFRSGPRSC*SRSRDLGRRAE
Trigger: CTCAGCTCTTCTGCCAAGGTCCCTACTCCTACTGCAACACGACCTTGGACCAGATCGGAACGTGCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR CAA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGAGCCAAACTGATCCTTaGCTGGCGTACCCCACCCAA +
Preference number: 3 (lower is better)
Translates to: DELHTSSRLNQAALGWGLSQTDP*LAYPTQ
Trigger: TTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGCT...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTGCACGATGCAACTGGTaGACTAAGGATGTGGCTTCC +
Preference number: 3 (lower is better)
Translates to: SDPATILGPHHSSGAWVTARCNW*TKDVAS
Trigger: GGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTCCGCCTGCAGGTGCTTaGACCATAAAGACTCCAAAC +
Preference number: 3 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCPPAGA*TIKTPN
Trigger: GTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGG...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGAGCGCACCTGATTGCTaGGCACACATCTCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: ERELARGQGPSPLRKMDVSAPDC*AHISFW
Trigger: CCAGAAAGAGATGTGTGCCAAGCAATCAGGTGCGCT...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506074.6
3UTR-3UTR CAA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCATCACTGAAGACATGGTaGGTTTCTGCTATTCCCATC +
Preference number: 3 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSSLKTW*VSAIPI
Trigger: GATGGGAATAGCAGAAACCAACCATGTCTTCAGTGA...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCACCCAGCCACGATCCTaGGCCCACACCACTCTTCGG +
Preference number: 3 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVTQPRS*AHTTLR
Trigger: CCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGT...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGCCGCCTGCAGGTGCTTaGACCATAAAGACTCCAAAC +
Preference number: 3 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWPPAGA*TIKTPN
Trigger: GTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGG...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCAAATCCATTCGGATTCTaGGCCAGGTGCAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSNPFGF*ARCSGS
Trigger: TGAGCCACTGCACCTGGCCAAGAATCCGAATGGATT...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR CCA 72 bp GAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTaGCTCTTCTCAGGGGGTCCTGTGAATTCCCTCTGC +
Preference number: 3 (lower is better)
Translates to: EAGMGKCLQTSD*LFSGGPVNSLC
Trigger: GCAGAGGGAATTCACAGGACCCCCTGAGAAGAGCCAGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 72 bp TGCAGACATCTGACTGGCTCTTCTCAGGGGGTCCTGTaGATTCCCTCTGCTTCCTCTTGCGCTGAGCCTGGT +
Preference number: 3 (lower is better)
Translates to: CRHLTGSSQGVL*IPSASSCAEPG
Trigger: ACCAGGCTCAGCGCAAGAGGAAGCAGAGGGAATTCACAGGACCCCCTGAGAAGAGCCAGTCAGATGTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 72 bp CCCACACCACTCTTCGGGTGCCTGGGTGACTTGACCTaGGGGGAGGCCACTTCCAAGAGGCATGGTTTATTT +
Preference number: 3 (lower is better)
Translates to: PTPLFGCLGDLT*GEATSKRHGLF
Trigger: AAATAAACCATGCCTCTTGGAAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAGAGTGGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 72 bp CCTCCATGCCTCTGCTCCTCATTTTGCCCCGCACGATaGAACTGGTTGACTAAGGATGTGGCTTCCCTGATG +
Preference number: 3 (lower is better)
Translates to: PPCLCSSFCPAR*NWLTKDVASLM
Trigger: CATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAGGCATGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CCA 72 bp TGCCTCTGCTCCTCATTTTGCCCCGCACGATGCAACTaGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCT +
Preference number: 3 (lower is better)
Translates to: CLCSSFCPARCN*LTKDVASLMAS
Trigger: AGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAGCCAAACTGATCCTTaGCTGGCGTACCCCACCCAA +
Preference number: 3 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSSQTDP*LAYPTQ
Trigger: TTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGCT...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACACCCAGCCACGATCCTaGGCCCACACCACTCTTCGG +
Preference number: 3 (lower is better)
Translates to: GALTIKTPNLPEVRERENTQPRS*AHTTLR
Trigger: CCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGT...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp TGTACTGGATTGTCTCGGATGTGGTGGACGCGCGTAACTTTGTCATTAGGATCCAAGAGGAAGAGGCACTaGCGCAGGCGCTCAGTGGAG +
Preference number: 3 (lower is better)
Translates to: CTGLSRMWWTRVTLSLGSKRKRH*RRRSVE
Trigger: CTCCACTGAGCGCCTGCGCAAGTGCCTCTTCCTCTT...GGATCCTAATGACAAAGTTACGCGCGTCCACCACATCCGAGACAATCCAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR CCA 72 bp CAGCGGCACCAGACCTCATTGCTCTCGTGCACTTCATaGTCAACGAGCTGCAGCAGGAACCACATGACATTT +
Preference number: 3 (lower is better)
Translates to: QRHQTSLLSCTS*STSCSRNHMTF
Trigger: AAATGTCATGTGGTTCCTGCTGCAGCTCGTTGACCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR GCA 72 bp CTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTaGTTTGACCATAAAGACTCCAAACCTACCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LVGVIRDRPACR*FDHKDSKPTRG
Trigger: ACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 72 bp ATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTaGAGGTGCTTTGACCATAAAGACTCCAAACCTACC +
Preference number: 3 (lower is better)
Translates to: ISLVGVIRDRPA*RCFDHKDSKPT
Trigger: GGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR GCA 72 bp ACCTCATTGCTCTCGTGCACTTCATGGTCAACGAGCTaGAGCAGGAACCACATGACATTTCGCAGGATAAAG +
Preference number: 3 (lower is better)
Translates to: TSLLSCTSWSTS*SRNHMTFRRIK
Trigger: CTTTATCCTGCGAAATGTCATGTGGTTCCTGCTGCAGCTCGTTGACCATGAAGTGCACGAGAGCAATGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR TCA 72 bp GAGGGCAAAGGGCAATGGGGTATGAGTTTCAATCACTaGAGACATGGTTGGTTTCTGCTATTCCCATCCCAC +
Preference number: 3 (lower is better)
Translates to: EGKGQWGMSFNH*RHGWFLLFPSH
Trigger: GTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATACCCCATTGCCCTTTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR TCA 72 bp GCTTGTCATCCAAAATGGGCTCACACTGTGAGTAGTTaGTCTTTGAGGCCCACGTCCCATTCTCCAAGCATT +
Preference number: 3 (lower is better)
Translates to: ACHPKWAHTVSS*SLRPTSHSPSI
Trigger: AATGCTTGGAGAATGGGACGTGGGCCTCAAAGATCAACTACTCACAGTGTGAGCCCATTTTGGATGACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR-3UTR CAA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTCACTGAAGACATGGTaGGTTTCTGCTATTCCCATC +
Preference number: 3 (lower is better)
Translates to: GALTIKTPNLPEVRERENSLKTW*VSAIPI
Trigger: GATGGGAATAGCAGAAACCAACCATGTCTTCAGTGA...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR-3UTR CAA 90 bp TTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTAATCCATTCGGATTCTaGGCCAGGTGCAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: FDQPWHMCVCCIEELFQGNPFGF*ARCSGS
Trigger: TGAGCCACTGCACCTGGCCAAGAATCCGAATGGATT...ACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423776.1
ENST00000452278.5
CDS-3UTR CCA 90 bp CAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGCGTGCGGAGAGGGAGTaGGAGTGCGCGCCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: QAVEQCRVHRVPQPRAERRAERE*ECAPGV
Trigger: CACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACG...CCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR GCA 90 bp TGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGCAGCCAGCGCCAGGCTaGAGTTGGCCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: WPPAGCGAVPRPSRPAAAQPAPG*SWPPAG
Trigger: GCCTGCTGGAGGCCAACTGCAGCCTGGCGCTGGCTG...CGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR GCA 90 bp AGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGAGAGGGAGTGGGAGTaGGCGCCCGGCGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: SRLWSSAASIASRSRVRREREWE*APGVTW
Trigger: CCAAGTCACGCCGGGCGCGCACTCCCACTCCCTCTC...TCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp GCCGTTGAAGTACTCGGGGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTGCGTGCCCGGCTGCGTATTaGAGCGGCGGTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AVEVLGARPLHEGSGSAACPAAY*SGGGRR
Trigger: CCTCCTCCCACCGCCGCTCCAATACGCAGCCGGGCA...CGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCCCCGAGTACTTCAACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp GCCGTTGAAGTACTCGGGGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTGCGTCCCCTCCCATCTCCTaGCCCACGAGAGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AVEVLGARPLHEGSGSAASPPIS*PTRACP
Trigger: TGGGCAGGCTCTCGTGGGGCAGGAGATGGGAGGGGA...CGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCCCCGAGTACTTCAACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp CCAGCGCCAGGCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCACAGGCTGTGGAGCAGTaGCGCGTCCATCGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: PAPGCSWPPAGCGAVPRPQAVEQ*RVHRVP
Trigger: CGGGACGCGATGGACGCGGCACTGCTCCACAGCCTG...TGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCCTGGCGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR GCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAGAGAGGGAGTGGGAGTaGGCGCCCGGCGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLREREWE*APGVTA
Trigger: CGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTC...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GCCAGGCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTGCCCGGCTGCGTATTaGAGCGGCGGTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ARLQLASSRLWSSAASIACPAAY*SGGGRR
Trigger: CCTCCTCCCACCGCCGCTCCAATACGCAGCCGGGCA...CGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCCTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp TGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGACAGGGGCTGGTCTTTaGGCATCTGGCTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: WPPAGCGAVPRPSRPAAATGAGL*ASGSAR
Trigger: CCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGT...CGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACTCCCGGGCAGCCTTTaGGCGCCACCTCCGGTCGCC +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSLPGSL*APPPVA
Trigger: GGCGACCGGAGGTGGCGCCCAAAGGCTGCCCGGGAG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp ACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCTGCTGGAGTGGACGCGAGAGTaGGCGGCCGAGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TECGGQGPVQGHTIAWLLEWTRE*AAERAR
Trigger: CCGCGCCCTCTCGGCCGCTCACTCTCGCGTCCACTC...CAGCAGCCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGGGCTCCGGCAGCGCTaGGGGGCCAGCACGTTCCGA +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLGLRQR*GASTFR
Trigger: TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAGGCGGCCACCAGGGCTaGCACAGATACGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRGGHQG*HRYAVA
Trigger: GGCCACTGCGTATCTGTGGCAGCCCTGGTGGCCGCC...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGACAGGCTGTGGAGCAGTaGCGCGTCCATCGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRQAVEQ*RVHRVP
Trigger: CGGGACGCGATGGACGCGGCACTGCTCCACAGCCTG...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTCAGCCAGCGCCAGGCTaGAGTTGGCCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPQPAPG*SWPPAG
Trigger: GCCTGCTGGAGGCCAACTGCAGCCTGGCGCTGGCTG...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTCGTGCGGAGAGGGAGTaGGAGTGCGCGCCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGRAERE*ECAPGV
Trigger: CACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACG...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTGGGCTCTCTTCCCATTTaGCCAACCCTGGCATATGTG +
Preference number: 4 (lower is better)
Translates to: HRVPQPRAEREWECAPGVGSLPI*PTLAYV
Trigger: CACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCC...CACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR TCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTGCAGGGGCACCACTaGGTGTGGAGGCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPLQGHH*VWRPRA
Trigger: GGCCCTTGGCCTCCACACTCAGTGGTGCCCCTGCAG...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGACTTCGGGTGCCTGGGTaGCTTGACCTGAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRLRVPG*LDLRGG
Trigger: GCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAG...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGGGCTCCGGCAGCGCTaGGGGGCCAGCACGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAGLRQR*GASTFR
Trigger: TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTTCCCCTCCCATCTCCTaGCCCACGAGAGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPSPPIS*PTRACP
Trigger: TGGGCAGGCTCTCGTGGGGCAGGAGATGGGAGGGGA...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGCAGGCTGTGGAGCAGTaGCGCGTCCATCGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: WKPASFMEPPRREDGWGGQAVEQ*RVHRVP
Trigger: CGGGACGCGATGGACGCGGCACTGCTCCACAGCCTG...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAGGCCCAGTAAGGCCCTaGCCAGAGAGGCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRGPVRP*PERLGW
Trigger: CCATCCCAGCCTCTCTGGCCAGGGCCTTACTGGGCC...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCAGGCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTGCCTCCAGCAGGCTGTaGAGCAGTGCCGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: PGCSWPPAGCGAVPRPSRASSRL*SSAASI
Trigger: GATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGC...ACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCCTGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGCTCCCGGGCAGCCTTTaGGCGCCACCTCCGGTCGCC +
Preference number: 4 (lower is better)
Translates to: ERELARGQGPSPLRKMDVLPGSL*APPPVA
Trigger: GGCGACCGGAGGTGGCGCCCAAAGGCTGCCCGGGAG...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGGGGACTCGAAGGGAGTaGTGGTCCTGCCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWGTRRE*WSCQRC
Trigger: GCACCGCTGGCAGGACCATCACTCCCTTCGAGTCCC...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGATGGTGTGGCAGTACTaGTCCAGAAGTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: QAVEQCRVHRVPQPRAERMVWQY*SRSAHR
Trigger: CCTGTGGGCACTTCTGGAGCAGTACTGCCACACCAT...CCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGAGGACAGGGGAGCTGTaGAGGTGGGCGACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLRTGEL*RWATEG
Trigger: CCCCTCGGTCGCCCACCTGCACAGCTCCCCTGTCCT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCATCCCCTCCCATCTCCTaGCCCACGAGAGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSSPPIS*PTRACP
Trigger: TGGGCAGGCTCTCGTGGGGCAGGAGATGGGAGGGGA...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGCAGGGCCACACCATTaGCTGGCTGCTGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPAGPHH*LAAGSM
Trigger: CATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGC...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACTCCTGCGGCTCCGCTaGAGGGACACAGGGACGGAA +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSLLRLR*RDTGTE
Trigger: TTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAGGAG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTGCTGCCCAGCACGGTaGTCACACCCTGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLCCPAR*SHPGQP
Trigger: GGGCTGGCCAGGGTGTGACCACCGTGCTGGGCAGCA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341843.8
ENST00000348438.8
CDS-3UTR CCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGTATTGGAGCGGCGGTaGGAGGAGGCAGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPVLERR*EEAEQA
Trigger: TGCCTGCTCTGCCTCCTCCCACCGCCGCTCCAATAC...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGATGCCCGGCTGCGTATTaGAGCGGCGGTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ERKPGLEACILHGAPKAGCPAAY*SGGGRR
Trigger: CCTCCTCCCACCGCCGCTCCAATACGCAGCCGGGCA...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp GCGTGCGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTGACTTGGCAGAAGAGCTGAGTGCCCACAGGGGCTaGTCTTTGGGCATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ACGEGVGVRARRDLAEELSAHRG*SLGIWL
Trigger: GAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACT...CAGCTCTTCTGCCAAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGGGAGCTGTGCAGGTaGGCGACCGAGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: ERKPGLEACILHGAPKAGGELCR*ATEGSH
Trigger: GTGTGACCCCTCGGTCGCCCACCTGCACAGCTCCCC...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGGGGAGCTGTGCAGGTaGGCGACCGAGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLGELCR*ATEGSH
Trigger: GTGTGACCCCTCGGTCGCCCACCTGCACAGCTCCCC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACGGGGAGCTGTGCAGGTaGGCGACCGAGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNGELCR*ATEGSH
Trigger: GTGTGACCCCTCGGTCGCCCACCTGCACAGCTCCCC...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTCCCAAGGCGGGAGGATaGCTGGGGAGGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLPKAGG*LGRGHR
Trigger: CCTGTGTCCCCTCCCCAGCCATCCTCCCGCCTTGGG...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGGCCTCCAGCAGGCTGTaGAGCAGTGCCGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWASSRL*SSAASI
Trigger: GATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGC...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTTGGCCCAGGCGACGATaGTGGGGAAGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLWPRRR*WGRGCT
Trigger: GGTGCATCCCCTTCCCCATCATCGTCGCCTGGGCCA...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTGGCCCAGGCGACGATaGTGGGGAAGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLWPRRR*WGRGCT
Trigger: GGTGCATCCCCTTCCCCATCATCGTCGCCTGGGCCA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTTGGCCCAGGCGACGATaGTGGGGAAGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGWPRRR*WGRGCT
Trigger: GGTGCATCCCCTTCCCCATCATCGTCGCCTGGGCCA...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGGGACTCGAAGGGAGTaGTGGTCCTGCCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLGTRRE*WSCQRC
Trigger: GCACCGCTGGCAGGACCATCACTCCCTTCGAGTCCC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGCTTCCTCTTGCGCTaGGCCTGGTGGCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNCFLLR*AWWPPL
Trigger: GAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCA...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCAGGTGCCTGGGTGACTTaGCCTGAGGGGAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPGAWVT*PEGRPL
Trigger: AAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACC...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGGGACTGGAGCCTGCTaGCCAGCACGGTGGTCACAC +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLGTGAC*PARWSH
Trigger: GTGTGACCACCGTGCTGGGCAGCAGGCTCCAGTCCC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341843.8
ENST00000348438.8
CDS-3UTR GCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGGGCGGCCACCAGGGCTaGCACAGATACGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMGGHQG*HRYAVA
Trigger: GGCCACTGCGTATCTGTGGCAGCCCTGGTGGCCGCC...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGGCGGCCACCAGGGCTaGCACAGATACGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAGGHQG*HRYAVA
Trigger: GGCCACTGCGTATCTGTGGCAGCCCTGGTGGCCGCC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGCGGCCACCAGGGCTaGCACAGATACGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKAGGHQG*HRYAVA
Trigger: GGCCACTGCGTATCTGTGGCAGCCCTGGTGGCCGCC...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCATGGTCCTGCCAGCGGTaGCACCTCTTCCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPWSCQR*HLFLTA
Trigger: AGCCGTGAGGAAGAGGTGGCACCGCTGGCAGGACCA...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGAGGACAGGGGAGCTGTaGAGGTGGGCGACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKARTGEL*RWATEG
Trigger: CCCCTCGGTCGCCCACCTGCACAGCTCCCCTGTCCT...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTAGGACAGGGGAGCTGTaGAGGTGGGCGACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SDPATILGPHHSSGAWVTRTGEL*RWATEG
Trigger: CCCCTCGGTCGCCCACCTGCACAGCTCCCCTGTCCT...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGCAGTCCCCCTTGGCTaGCGCACCCCCTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLAVPLG*RTPSFL
Trigger: CAGGAAAGAGGGGGTGCGGCAGCCAAGGGGGACTGC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGGAGGCCAAGGGCCAGTaGAGGGCCACACCATTGCCT +
Preference number: 4 (lower is better)
Translates to: WKPASFMEPPRREDGWGGEAKGQ*RATPLP
Trigger: AGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTC...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTCGTACCCCACCCAACTaGAGGGGCACCACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPRTPPN*RGTTEC
Trigger: ACACTCAGTGGTGCCCCTGCAGTTGGGTGGGGTACG...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAGCCAAGCCTGGAAGCTaGCCTGGTGGTCAACTGAGG +
Preference number: 4 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRAKPGS*PGGQLR
Trigger: CCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGC...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp ACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCTGCTGCTCCTGCGGCTCCGCTaGAGGGACACAGGGACGGAA +
Preference number: 4 (lower is better)
Translates to: TECGGQGPVQGHTIAWLLLLRLR*RDTGTE
Trigger: TTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAGGAG...CAGCAGCCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGCGCGCCCGGCGTGACTaGGAGGGAGTGGACGCGAGA +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLRARRD*EGVDAR
Trigger: TCTCGCGTCCACTCCCTCGCAGTCACGCCGGGCGCG...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCTGGGGGTTAGGGACTaGAGCCTGCTGCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLLGVRD*SLLPST
Trigger: CGTGCTGGGCAGCAGGCTCCAGTCCCTAACCCCCAG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341843.8
ENST00000348438.8
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATGCCCGGCTGCGTATTaGAGCGGCGGTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLACPAAY*SGGGRR
Trigger: CCTCCTCCCACCGCCGCTCCAATACGCAGCCGGGCA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
CDS-3UTR CCA 90 bp GCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGTGGTCTTTGGGCATCTaGCTCTGCCCGGCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: AAVGLQQAVEQCRVHRVPWSLGI*LCPAAY
Trigger: ATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCA...CGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp GTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGGATCCATTCGGATTCTTaGCCAGGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VEQCRVHRVPQPRAEREWIHSDS*PGAVAH
Trigger: GTGAGCCACTGCACCTGGCCAAGAATCCGAATGGAT...CCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGGGGGAGCTGTGCAGGTaGGCGACCGAGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMGELCR*ATEGSH
Trigger: GTGTGACCCCTCGGTCGCCCACCTGCACAGCTCCCC...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACCCAGCCACGATCCTTaGCCCACACCACTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSPSHDP*PTPLFG
Trigger: CCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATGGCCCAGGCGACGATaGTGGGGAAGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAWPRRR*WGRGCT
Trigger: GGTGCATCCCCTTCCCCATCATCGTCGCCTGGGCCA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGGACTCGAAGGGAGTaGTGGTCCTGCCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKAGTRRE*WSCQRC
Trigger: GCACCGCTGGCAGGACCATCACTCCCTTCGAGTCCC...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAGCTGATCCGTGTGGGTaGTGTAGGGATGGACATGGC +
Preference number: 4 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRADPCG*CRDGHG
Trigger: GCCATGTCCATCCCTACATCACCCACACGGATCAGC...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTGGGTGACTTGACCTaGGGGGAGGCCACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPLGDLT*GEATSK
Trigger: CTTGGAAGTGGCCTCCCCTCAGGTCAAGTCACCCAG...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCATTAGGGACTGGAGCCTaGTGCCCAGCACGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSLGTGA*CPARWS
Trigger: TGACCACCGTGCTGGGCAGCAGGCTCCAGTCCCTAA...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTGGTCCTGCCAGCGGTaGCACCTCTTCCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLWSCQR*HLFLTA
Trigger: AGCCGTGAGGAAGAGGTGGCACCGCTGGCAGGACCA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTTCCCCTCCCATCTCCTaGCCCACGAGAGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCSPPIS*PTRACP
Trigger: TGGGCAGGCTCTCGTGGGGCAGGAGATGGGAGGGGA...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACCCCCTCTTTCCTaGCAGGCTGGAGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLAPPLS*QAGELV
Trigger: GACCAGCTCTCCAGCCTGGCAGGAAAGAGGGGGTGC...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCGCACCCCCTCTTTCCTaGCAGGCTGGAGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGAPPLS*QAGELV
Trigger: GACCAGCTCTCCAGCCTGGCAGGAAAGAGGGGGTGC...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGCAGTCCCCCTTGGCTaGCGCACCCCCTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAAVPLG*RTPSFL
Trigger: CAGGAAAGAGGGGGTGCGGCAGCCAAGGGGGACTGC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCTCATCCCTGTCCCTTaGAGTCCCCCTTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLLIPVP*SPPWLP
Trigger: CGGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGGGCCACACCATTaGCTGGCTGCTGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLAGPHH*LAAGSM
Trigger: CATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGC...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTCCGAGTGCACGGAGCTaGGGGTACAGCCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: VRPWPERLGWANACRHLTPSARS*GYSRSA
Trigger: GGCGGAGCGGCTGTACCCGCAGCTCCGTGCACTCGG...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS-3UTR GCA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTAGAGGAGCCGCCGAGTaGACGGAGCTGCGGGTACAG +
Preference number: 4 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCRGAAE*TELRVQ
Trigger: CTGTACCCGCAGCTCCGTGCACTCGGCGGCTCCTCT...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS-3UTR CCA 90 bp GCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGGGAGTGAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: AVPRPSRPAAACGEGVGVRVMMV*QYCSRS
Trigger: ACTTCTGGAGCAGTACTGCCACACCATCATGACCCT...CACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp GTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGGCATAATCTCAGCACTTaGGGAAGCCAAGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: VEQCRVHRVPQPRAEREWHNLST*GSQGRQ
Trigger: CTGCCTACCTTGGCTTCCCCAAGTGCTGAGATTATG...CCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp GGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTGCGGGGCCAGCACGTTCCGACCATTTGACCAACCCTaGCATATGTGTGTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GTASPRGLRQRCGASTFRPFDQP*HMCVCC
Trigger: GCAACACACACACATATGCCAGGGTTGGTCAAATGG...TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGGCAGGAGCACCAGGGTaGCCTTCACTGCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: WKPASFMEPPRREDGWGGAGAPG*PSLPSC
Trigger: ACAGGAAGGCAGTGAAGGCCACCCTGGTGCTCCTGC...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACATGGCCCGGGCCATaGGGACTCGAAGGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSTWPGP*GLEGSD
Trigger: ATCACTCCCTTCGAGTCCCCATGGCCCGGGCCATGT...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGTGGCCTTCACTGCCTTCCTGTACTGGATTGTCTCGGATGTGGTGGACGCGCGGGGGAGCTGTGCAGGTaGGCGACCGAGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: GGLHCLPVLDCLGCGGRAGELCR*ATEGSH
Trigger: GTGTGACCCCTCGGTCGCCCACCTGCACAGCTCCCC...CGCGCGTCCACCACATCCGAGACAATCCAGTACAGGAAGGCAGTGAAGGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGCCTGGCCAGAGAGGCTaGGATGGGCAAATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WKPASFMEPPRREDGWGGPGQRG*DGQMPA
Trigger: TGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGG...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCCTGGCCAGAGAGGCTaGGATGGGCAAATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWPGQRG*DGQMPA
Trigger: TGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGG...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGGCCCAGTAAGGCCCTaGCCAGAGAGGCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: ERELARGQGPSPLRKMDVGPVRP*PERLGW
Trigger: CCATCCCAGCCTCTCTGGCCAGGGCCTTACTGGGCC...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGCAGAGCCTTGGCCTTTaGGACAGGCCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: WKPASFMEPPRREDGWGGQSLGL*DRPWLA
Trigger: AGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTG...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTGCCTCCAGCAGGCTGTaGAGCAGTGCCGCGTCCATC +
Preference number: 4 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCASSRL*SSAASI
Trigger: GATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGC...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACCCAGAGCTGTCAAGTaGGGACCTTCCCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPPRAVK*GPSRRG
Trigger: TCCTCTCCGGGAAGGTCCCCACTTGACAGCTCTGGG...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS-3UTR TCA 90 bp GCCGTTGAAGTACTCGGGGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTGCGAATTCAAGACCAGCCTaGGAGGTTGGTGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: AVEVLGARPLHEGSGSAANSRPA*EVGEGH
Trigger: ATGACCCTCACCAACCTCTCAGGCTGGTCTTGAATT...CGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCCCCGAGTACTTCAACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp AGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGTAGGCAGATTGCTTaGGCACAGGAATTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SRLWSSAASIASRSRVRRGRQIA*AQEFKT
Trigger: GGTCTTGAATTCCTGTGCTCAAGCAATCTGCCTACC...TCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR TCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAAGTGGCCCAGGTAGTTaGCGACAAGGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: ERKPGLEACILHGAPKAGSGPGS*RQGRCG
Trigger: ACCGCATCGCCCTTGTCGTCAACTACCTGGGCCACT...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGTGGCCCAGGCGACGATaGTGGGGAAGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWWPRRR*WGRGCT
Trigger: GGTGCATCCCCTTCCCCATCATCGTCGCCTGGGCCA...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCAGATGAACATGATCTGTaGCAGGTCGTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPDEHDL*QVVLPG
Trigger: CCCGGGGAGGACGACCTGTCACAGATCATGTTCATC...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACCTCTTCCTCACGGCTaGGCGCACCTCTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSPLPHG*AHLSIE
Trigger: TTCAATGGAGAGGTGCGCTCAGCCGTGAGGAAGAGG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341843.8
ENST00000471646.6
CDS-3UTR TCA 90 bp GGTGGCCTTCACTGCCTTCCTGTACTGGATTGTCTCGGATGTGGTGGACGCGCGGGGACTCGAAGGGAGTaGTGGTCCTGCCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GGLHCLPVLDCLGCGGRAGTRRE*WSCQRC
Trigger: GCACCGCTGGCAGGACCATCACTCCCTTCGAGTCCC...CGCGCGTCCACCACATCCGAGACAATCCAGTACAGGAAGGCAGTGAAGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp GGTGGCCTTCACTGCCTTCCTGTACTGGATTGTCTCGGATGTGGTGGACGCGCGTGCTTCCTCTTGCGCTaGGCCTGGTGGCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: GGLHCLPVLDCLGCGGRACFLLR*AWWPPL
Trigger: GAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCA...CGCGCGTCCACCACATCCGAGACAATCCAGTACAGGAAGGCAGTGAAGGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGACTGGGTGACTTGACCTaGGGGGAGGCCACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: ERKPGLEACILHGAPKAGLGDLT*GEATSK
Trigger: CTTGGAAGTGGCCTCCCCTCAGGTCAAGTCACCCAG...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAACACCTCCTCCAGGCTaGATCAAGCTGCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRTPPPG*IKLPLV
Trigger: AACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGT...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTTAGGGACTGGAGCCTaGTGCCCAGCACGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLLGTGA*CPARWS
Trigger: TGACCACCGTGCTGGGCAGCAGGCTCCAGTCCCTAA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341843.8
ENST00000348438.8
CDS-3UTR GCA 90 bp ACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCTGCTGTTGGGCATCTGGCTCTaGCCGGCTGCGTATTGGAGC +
Preference number: 4 (lower is better)
Translates to: TECGGQGPVQGHTIAWLLLGIWL*PAAYWS
Trigger: GCTCCAATACGCAGCCGGGCAGAGCCAGATGCCCAA...CAGCAGCCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR GCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTGGGCTCCGGCAGCGCTaGGGGGCCAGCACGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRGLRQR*GASTFR
Trigger: TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCC...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATGGTCCTGCCAGCGGTaGCACCTCTTCCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAWSCQR*HLFLTA
Trigger: AGCCGTGAGGAAGAGGTGGCACCGCTGGCAGGACCA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGTGGTCCTGCCAGCGGTaGCACCTCTTCCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMWSCQR*HLFLTA
Trigger: AGCCGTGAGGAAGAGGTGGCACCGCTGGCAGGACCA...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACACACAGCGGCCGTCTaGTTGATGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPHTAAV*LMLWKL
Trigger: CAGCTTCCACAGCATCAAGCAGACGGCCGCTGTGTG...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGCACACAGCGGCCGTCTaGTTGATGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WKPASFMEPPRREDGWGGHTAAV*LMLWKL
Trigger: CAGCTTCCACAGCATCAAGCAGACGGCCGCTGTGTG...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTTGCCCCACGAGAGCCTaGCCAGCACAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCCPTRA*PAQRTQ
Trigger: CTGGGTTCTCTGTGCTGGGCAGGCTCTCGTGGGGCA...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATGCCCCACGAGAGCCTaGCCAGCACAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLACPTRA*PAQRTQ
Trigger: CTGGGTTCTCTGTGCTGGGCAGGCTCTCGTGGGGCA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCACCCCCTCTTTCCTaGCAGGCTGGAGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: ERELARGQGPSPLRKMDVAPPLS*QAGELV
Trigger: GACCAGCTCTCCAGCCTGGCAGGAAAGAGGGGGTGC...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGCAGTCCCCCTTGGCTaGCGCACCCCCTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLAVPLG*RTPSFL
Trigger: CAGGAAAGAGGGGGTGCGGCAGCCAAGGGGGACTGC...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGCTCATCCCTGTCCCTTaGAGTCCCCCTTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ERELARGQGPSPLRKMDVLIPVP*SPPWLP
Trigger: CGGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAG...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACTCATCCCTGTCCCTTaGAGTCCCCCTTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLALIPVP*SPPWLP
Trigger: CGGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGCCAAACTGATCCTTTaGTGGCGTACCCCACCCAAC +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPAKLIL*WRTPPN
Trigger: GTTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGC...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACGCCTCCCTCCTCCATaGCTCTGCTCCTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSRLPPP*LCSSFC
Trigger: GCAAAATGAGGAGCAGAGGCATGGAGGAGGGAGGCG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGGCTGAATCAAGCTaGCCTTGGTTGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLQAESS*PWLGAG
Trigger: CCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCAGGCTGAATCAAGCTaGCCTTGGTTGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGQAESS*PWLGAG
Trigger: CCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTG...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGACAGGCCCTGGCTTaGTGGATGAGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLGQALA*WMSCTP
Trigger: AGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTGTCC...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGGACAGGCCCTGGCTTaGTGGATGAGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLGQALA*WMSCTP
Trigger: AGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTGTCC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCGGGCCATGTCTACCCTaGCCACCAGATTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGGPCLP*PPDSRA
Trigger: GGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCC...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGCCAAGCCTGGAAGCTaGCCTGGTGGTCAACTGAGG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLAKPGS*PGGQLR
Trigger: CCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTCAGCCAGCGCCAGGCTaGAGTTGGCCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VRPWPERLGWANACRHLTQPAPG*SWPPAG
Trigger: GCCTGCTGGAGGCCAACTGCAGCCTGGCGCTGGCTG...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTCGGCCTGGGCTTCCTTaGTCACCCAGCTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGRPGLP*SPSSLH
Trigger: ATGGAGAGAGCTGGGTGAGCAAGGAAGCCCAGGCCG...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAACAGGGGCTGGTCTTTaGGCATCTGGCTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLATGAGL*ASGSAR
Trigger: CCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
CDS-3UTR CCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTCTCTCGTGCACTTCATaGTCAACGAGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPLSCTS*STSCSR
Trigger: CCTGCTGCAGCTCGTTGACCATGAAGTGCACGAGAG...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGCAGGAGCACCAGGGTaGCCTTCACTGCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLAGAPG*PSLPSC
Trigger: ACAGGAAGGCAGTGAAGGCCACCCTGGTGCTCCTGC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGACATGGCCCGGGCCATaGGGACTCGAAGGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLTWPGP*GLEGSD
Trigger: ATCACTCCCTTCGAGTCCCCATGGCCCGGGCCATGT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTACATGGCCCGGGCCATaGGGACTCGAAGGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLTWPGP*GLEGSD
Trigger: ATCACTCCCTTCGAGTCCCCATGGCCCGGGCCATGT...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCACATGGCCCGGGCCATaGGGACTCGAAGGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGTWPGP*GLEGSD
Trigger: ATCACTCCCTTCGAGTCCCCATGGCCCGGGCCATGT...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTCTGCAGACATCTGACTaGCTCTTCTCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPLQTSD*LFSGGP
Trigger: AGGACCCCCTGAGAAGAGCCAGTCAGATGTCTGCAG...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTCTAGGTGACAGCCCCTaGGATAAGGCAGCCAAACTG +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPLGDSP*DKAAKL
Trigger: CAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAG...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGAGCCTGCATCCTTCATaGAGCCCCCAAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMSLHPS*SPQGGR
Trigger: CCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCT...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACCCAGCCACGATCCTTaGCCCACACCACTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAPSHDP*PTPLFG
Trigger: CCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGCCCAGCCACGATCCTTaGCCCACACCACTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: ERELARGQGPSPLRKMDVPSHDP*PTPLFG
Trigger: CCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGG...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTCACACTGTGAGTAGTTaGTCTTTGAGGCCCACGTCC +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPHTVSS*SLRPTS
Trigger: GGACGTGGGCCTCAAAGATCAACTACTCACAGTGTG...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAAGTGGCCCAGGTAGTTaGCGACAAGGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLASGPGS*RQGRCG
Trigger: ACCGCATCGCCCTTGTCGTCAACTACCTGGGCCACT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTGATGAACATGATCTGTaGCAGGTCGTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGDEHDL*QVVLPG
Trigger: CCCGGGGAGGACGACCTGTCACAGATCATGTTCATC...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGCTGATCCGTGTGGGTaGTGTAGGGATGGACATGGC +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLADPCG*CRDGHG
Trigger: GCCATGTCCATCCCTACATCACCCACACGGATCAGC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCAGGGTGGGGTACAAGTaGGCCTCTCTAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGRVGYK*ASLGDS
Trigger: GCTGTCACCTAGAGAGGCTCACTTGTACCCCACCCT...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACTGGGTGACTTGACCTaGGGGGAGGCCACTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLALGDLT*GEATSK
Trigger: CTTGGAAGTGGCCTCCCCTCAGGTCAAGTCACCCAG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGGGTGCCTGGGTGACTTaGCCTGAGGGGAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWGAWVT*PEGRPL
Trigger: AAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACC...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCGAGTGGACGCGAGAGTaGGCGGCCGAGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVEWTRE*AAERAR
Trigger: CCGCGCCCTCTCGGCCGCTCACTCTCGCGTCCACTC...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAGTGCGCGCCCGGCGTaGCTGCGAGGGAGTGGACGC +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSSARPA*LRGSGR
Trigger: GCGTCCACTCCCTCGCAGTCACGCCGGGCGCGCACT...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCGGGCTCCGGCAGCGCTaGGGGGCCAGCACGTTCCGA +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVGLRQR*GASTFR
Trigger: TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCC...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACACAGCGGCCGTCTaGTTGATGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLHTAAV*LMLWKL
Trigger: CAGCTTCCACAGCATCAAGCAGACGGCCGCTGTGTG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGCTCATCCCTGTCCCTTaGAGTCCCCCTTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLLIPVP*SPPWLP
Trigger: CGGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAG...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGCGTACCCCACCCAACTaGAGGGGCACCACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRRTPPN*RGTTEC
Trigger: ACACTCAGTGGTGCCCCTGCAGTTGGGTGGGGTACG...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGGCCAAACTGATCCTTTaGTGGCGTACCCCACCCAAC +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWAKLIL*WRTPPN
Trigger: GTTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGC...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp ACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCTGCTGCCTCCTCCATGCCTCTaGTCCTCATTTTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: TECGGQGPVQGHTIAWLLPPPCL*SSFCPA
Trigger: TGCGGGGCAAAATGAGGAGCAGAGGCATGGAGGAGG...CAGCAGCCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGCAGGCTGAATCAAGCTaGCCTTGGTTGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMQAESS*PWLGAG
Trigger: CCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTG...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGGGCCATGTCTACCCTaGCCACCAGATTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAGPCLP*PPDSRA
Trigger: GGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGTCTCTCCCTGACTCCTaGGGCTCCGCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLSLPDS*GSAAGT
Trigger: TGTCCCTGCAGCGGAGCCGCAGGAGTCAGGGAGAGA...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTGAGAGGGAGTGGGAGTaGGCGCCCGGCGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWREREWE*APGVTA
Trigger: CGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTC...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAAGTGCCCACAGGGGCTaGTCTTTGGGCATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLASAHRG*SLGIWL
Trigger: GAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
CDS-3UTR CCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCTGCAGACATCTGACTaGCTCTTCTCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWLQTSD*LFSGGP
Trigger: AGGACCCCCTGAGAAGAGCCAGTCAGATGTCTGCAG...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCCAGAGAGGCTGGGATaGGCAAATGCCTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWPERLG*ANACRH
Trigger: ATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGG...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGCAGAGCCTTGGCCTTTaGGACAGGCCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ERELARGQGPSPLRKMDVQSLGL*DRPWLA
Trigger: AGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTG...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTCAGAGCCTTGGCCTTTaGGACAGGCCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SDPATILGPHHSSGAWVTQSLGL*DRPWLA
Trigger: AGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTG...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGGCCTGGAAGCTGCCCTaGTGGTCAACTGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWAWKLP*WSTEGP
Trigger: TGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGC...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCCGTGCGGAGAGGGAGTaGGAGTGCGCGCCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSRAERE*ECAPGV
Trigger: CACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACG...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
3UTR CAA 72 bp GGTGGGCGACCGAGGGGTCACACAGCGGCCGTCTGCTaGATGCTGTGGAAGCTGATCCGTGTGGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: GGRPRGHTAAVC*MLWKLIRVGDV
Trigger: TACATCACCCACACGGATCAGCTTCCACAGCATCAAGCAGACGGCCGCTGTGTGACCCCTCGGTCGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452278.5
ENST00000506074.6
CDS-3UTR TCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGTGATGAGGTTCCAGTaGATCACATTCCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPVMRFQ*ITFRRQ
Trigger: CTGTCTGCGGAATGTGATTCACTGGAACCTCATCAC...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGGATGCACCATCCGATaGAGAGGAAGAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLGCTIR*RGRGTC
Trigger: GCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGATGCACCATCCGATaGAGAGGAAGAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLGCTIR*RGRGTC
Trigger: GCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCC...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGATGAACATGATCTGTaGCAGGTCGTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLADEHDL*QVVLPG
Trigger: CCCGGGGAGGACGACCTGTCACAGATCATGTTCATC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGATGAACATGATCTGTaGCAGGTCGTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKADEHDL*QVVLPG
Trigger: CCCGGGGAGGACGACCTGTCACAGATCATGTTCATC...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACCTCTTCCTCACGGCTaGGCGCACCTCTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAPLPHG*AHLSIE
Trigger: TTCAATGGAGAGGTGCGCTCAGCCGTGAGGAAGAGG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
CDS-3UTR TCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGCTGATCCGTGTGGGTaGTGTAGGGATGGACATGGC +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKAADPCG*CRDGHG
Trigger: GCCATGTCCATCCCTACATCACCCACACGGATCAGC...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACACGATGCAACTGGTTaGCTAAGGATGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSHDATG*LRMWLP
Trigger: GGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTGAGCAGAGATGTTTCTaGAGGGGAGACTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGEQRCF*RGDWRA
Trigger: TGCCCTCCAGTCTCCCCTTCAGAAACATCTCTGCTC...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGTAGGAGTAGGGACCTaGGAGGTTGGTGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLVGVGT*EVGEGH
Trigger: ATGACCCTCACCAACCTCTCAGGTCCCTACTCCTAC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348438.8
CDS-3UTR TCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGACGGCTGAGCGCACCTaGTTGCTTGGCACACATCTC +
Preference number: 4 (lower is better)
Translates to: ERELARGQGPSPLRKMDVTAERT*LLGTHL
Trigger: GAGATGTGTGCCAAGCAATCAGGTGCGCTCAGCCGT...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS-3UTR GCA 90 bp AATGATGGGGCCTTGGTAGATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAAGGCGGCCACCAGGGCTaGCACAGATACGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: NDGALVDVVHQVARLLAKGGHQG*HRYAVA
Trigger: GGCCACTGCGTATCTGTGGCAGCCCTGGTGGCCGCC...TTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATCTACCAAGGCCCCATCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAACCTCATTGCTCTCGTaGACTTCATGGTCAACGAGC +
Preference number: 4 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRTSLLS*TSWSTS
Trigger: GCTCGTTGACCATGAAGTGCACGAGAGCAATGAGGT...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTCTCATAGTAGAGCTTaGCGATGGCCCAGGCGACGA +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLSHSRA*RWPRRR
Trigger: TCGTCGCCTGGGCCATCGGCAAGCTCTACTATGAGA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTCACACAGCGGCCGTCTaGTTGATGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SDPATILGPHHSSGAWVTHTAAV*LMLWKL
Trigger: CAGCTTCCACAGCATCAAGCAGACGGCCGCTGTGTG...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACGCTGGGATGGGCAAATaGCTGCAGACATCTGACTGG +
Preference number: 4 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNAGMGK*LQTSDW
Trigger: CCAGTCAGATGTCTGCAGGCATTTGCCCATCCCAGC...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGCGTCTTCCTTGATTaGCTAATCTGTGGACTAGGC +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPGVFLD*LICGLG
Trigger: GCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCC...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTCTCTGCTCCTCATTTTaGCCCGCACGATGCAACTGG +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLLCSSF*PARCNW
Trigger: CCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAG...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTCGCCTCCCTCCTCCATaGCTCTGCTCCTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCRLPPP*LCSSFC
Trigger: GCAAAATGAGGAGCAGAGGCATGGAGGAGGGAGGCG...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAAGACCCGCCTGCAGGTaGTTTGACCATAAAGACTCC +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSRPACR*FDHKDS
Trigger: GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCT...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCAAGACCCGCCTGCAGGTaGTTTGACCATAAAGACTCC +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPRPACR*FDHKDS
Trigger: GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCT...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGAGGGACAGACCCGCCTaGAGGTGCTTTGACCATAAA +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWRDRPA*RCFDHK
Trigger: TTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCT...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCATGTCTACCCTaGCCACCAGATTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLGPCLP*PPDSRA
Trigger: GGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCC...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATGGTCTTTGGGCATCTaGCTCTGCCCGGCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAWSLGI*LCPAAY
Trigger: ATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
CDS-3UTR CCA 90 bp CCAGCGCCAGGCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCACCATTTGACCAACCCTaGCATATGTGTGTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: PAPGCSWPPAGCGAVPRPPFDQP*HMCVCC
Trigger: GCAACACACACACATATGCCAGGGTTGGTCAAATGG...TGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCCTGGCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGCACGTTCCGATCTaGTCCAAGGTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLQHVPI*SKVVLQ
Trigger: CTGCAACACGACCTTGGACCAGATCGGAACGTGCTG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCTCTCGTGCACTTCATaGTCAACGAGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLLSCTS*STSCSR
Trigger: CCTGCTGCAGCTCGTTGACCATGAAGTGCACGAGAG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTCTCTCGTGCACTTCATaGTCAACGAGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGLSCTS*STSCSR
Trigger: CCTGCTGCAGCTCGTTGACCATGAAGTGCACGAGAG...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCAGCAGGAGCACCAGGGTaGCCTTCACTGCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSAGAPG*PSLPSC
Trigger: ACAGGAAGGCAGTGAAGGCCACCCTGGTGCTCCTGC...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTTCTTTCCTGCCAGGCTaGAGAGCTGGTCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCSFLPG*RAGLSP
Trigger: AGGGGAGAGACCAGCTCTCCAGCCTGGCAGGAAAGA...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATCTTTCCTGCCAGGCTaGAGAGCTGGTCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLASFLPG*RAGLSP
Trigger: AGGGGAGAGACCAGCTCTCCAGCCTGGCAGGAAAGA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTCCAGAGAGGCTGGGATaGGCAAATGCCTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGPERLG*ANACRH
Trigger: ATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGG...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCAAAACTGATCCTTTGCTaGCGTACCCCACCCAACTGC +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPKLILC*RTPPNC
Trigger: GCAGTTGGGTGGGGTACGCCAGCAAAGGATCAGTTT...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACCCGCACGATGCAACTaGTTGACTAAGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSPARCN*LTKDVA
Trigger: AGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTCCCTTGGTTGGGGGCTaGGGCCAGGTATTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VRPWPERLGWANACRHLTPLVGG*GQVLAW
Trigger: CCAGGCTAATACCTGGCCCCAGCCCCCAACCAAGGG...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGCAGGCCCTGGCTTGCTaGATGAGCTGCACACCTCCT +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLQALAC*MSCTPP
Trigger: AGGAGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTG...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCAGGTAGGCAGATTGCTTaGGCACAGGAATTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPGRQIA*AQEFKT
Trigger: GGTCTTGAATTCCTGTGCTCAAGCAATCTGCCTACC...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR TCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGGTGATGAGGTTCCAGTaGATCACATTCCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWVMRFQ*ITFRRQ
Trigger: CTGTCTGCGGAATGTGATTCACTGGAACCTCATCAC...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGGGATGCACCATCCGATaGAGAGGAAGAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMGCTIR*RGRGTC
Trigger: GCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCC...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTTCAGGAGCACGAGAATaGTGGGGCCTTGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLSGARE*WGLGRC
Trigger: ACATCTACCAAGGCCCCATCATTCTCGTGCTCCTGA...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTCAGGAGCACGAGAATaGTGGGGCCTTGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLSGARE*WGLGRC
Trigger: ACATCTACCAAGGCCCCATCATTCTCGTGCTCCTGA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGTGGCCTTCACTGCCTTCCTGTACTGGATTGTCTCGGATGTGGTGGACGCGCGGCTGATCCGTGTGGGTaGTGTAGGGATGGACATGGC +
Preference number: 4 (lower is better)
Translates to: GGLHCLPVLDCLGCGGRAADPCG*CRDGHG
Trigger: GCCATGTCCATCCCTACATCACCCACACGGATCAGC...CGCGCGTCCACCACATCCGAGACAATCCAGTACAGGAAGGCAGTGAAGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTTGCTTCCTCTTGCGCTaGGCCTGGTGGCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRCFLLR*AWWPPL
Trigger: GAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCA...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCCTGCAGGGGCACCACTaGGTGTGGAGGCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSLQGHH*VWRPRA
Trigger: GGCCCTTGGCCTCCACACTCAGTGGTGCCCCTGCAG...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGCTGCAGGGGCACCACTaGGTGTGGAGGCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLLQGHH*VWRPRA
Trigger: GGCCCTTGGCCTCCACACTCAGTGGTGCCCCTGCAG...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGAGGGTGGGGTACAAGTaGGCCTCTCTAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWRVGYK*ASLGDS
Trigger: GCTGTCACCTAGAGAGGCTCACTTGTACCCCACCCT...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTCTTCGGGTGCCTGGGTaGCTTGACCTGAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRLRVPG*LDLRGG
Trigger: GCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAG...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGACACCTCCTCCAGGCTaGATCAAGCTGCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRTPPPG*IKLPLV
Trigger: AACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGT...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCATTGGAAGAAATGGCCTaGTGCTTCTCTCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPLEEMA*CFSLPD
Trigger: GTCAGGGAGAGAGAAGCATCAGGCCATTTCTTCCAA...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACGGGACTGGAGCCTGCTaGCCAGCACGGTGGTCACAC +
Preference number: 4 (lower is better)
Translates to: GISLVGVIRDRPACRCFDGTGAC*PARWSH
Trigger: GTGTGACCACCGTGCTGGGCAGCAGGCTCCAGTCCC...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAATGGTGTGGCAGTACTaGTCCAGAAGTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAMVWQY*SRSAHR
Trigger: CCTGTGGGCACTTCTGGAGCAGTACTGCCACACCAT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
CDS-3UTR GCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGTCATGGTCAACGAGCTaGAGCAGGAACCACATGACA +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWSWSTS*SRNHMT
Trigger: TGTCATGTGGTTCCTGCTGCAGCTCGTTGACCATGA...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGTCTCATAGTAGAGCTTaGCGATGGCCCAGGCGACGA +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKASHSRA*RWPRRR
Trigger: TCGTCGCCTGGGCCATCGGCAAGCTCTACTATGAGA...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGTCTCATAGTAGAGCTTaGCGATGGCCCAGGCGACGA +
Preference number: 4 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRSHSRA*RWPRRR
Trigger: TCGTCGCCTGGGCCATCGGCAAGCTCTACTATGAGA...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGTCTCATAGTAGAGCTTaGCGATGGCCCAGGCGACGA +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMSHSRA*RWPRRR
Trigger: TCGTCGCCTGGGCCATCGGCAAGCTCTACTATGAGA...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACGCAGTCCCCCTTGGCTaGCGCACCCCCTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GISLVGVIRDRPACRCFDAVPLG*RTPSFL
Trigger: CAGGAAAGAGGGGGTGCGGCAGCCAAGGGGGACTGC...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGGGCGTCTTCCTTGATTaGCTAATCTGTGGACTAGGC +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWGVFLD*LICGLG
Trigger: GCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCC...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGGTCCAAGGTCGTGTTaGAGTAGGAGTAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAGPRSC*SRSRDL
Trigger: CAGGTCCCTACTCCTACTGCAACACGACCTTGGACC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348438.8
CDS-3UTR GCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGTCCAAGGTCGTGTTaGAGTAGGAGTAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKAGPRSC*SRSRDP
Trigger: AGGGTCCCTACTCCTACTGCAACACGACCTTGGACC...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCTGCTGCCCAGCACGGTaGTCACACCCTGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVCCPAR*SHPGQP
Trigger: GGGCTGGCCAGGGTGTGACCACCGTGCTGGGCAGCA...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp GCATTCCGGGTCGTGTTGTACTTGACGCCGTTGAAGTACTCGGGGCACGGCCTCTGGTCTTTGGGCATCTaGCTCTGCCCGGCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: AFRVVLYLTPLKYSGHGLWSLGI*LCPAAY
Trigger: ATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCA...GAGGCCGTGCCCCGAGTACTTCAACGGCGTCAAGTACAACACGACCCGGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACAGCACGTTCCGATCTaGTCCAAGGTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAQHVPI*SKVVLQ
Trigger: CTGCAACACGACCTTGGACCAGATCGGAACGTGCTG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACTCTCGTGCACTTCATaGTCAACGAGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLALSCTS*STSCSR
Trigger: CCTGCTGCAGCTCGTTGACCATGAAGTGCACGAGAG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGATTGTCTCGGATGTaGTGGACGCGCGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLGLSRM*WTRVTL
Trigger: CAAAGTTACGCGCGTCCACCACATCCGAGACAATCC...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCAACTGCCTTCCTGTACTaGATTGTCTCGGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: PTRGQRERELARGQGPSPTAFLY*IVSDVV
Trigger: CACCACATCCGAGACAATCCAGTACAGGAAGGCAGT...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTGCAGGAGCACCAGGGTaGCCTTCACTGCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VRPWPERLGWANACRHLTAGAPG*PSLPSC
Trigger: ACAGGAAGGCAGTGAAGGCCACCCTGGTGCTCCTGC...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGACACGAAGAAACCCTaGAACGACTGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLDTKKP*NDCRKE
Trigger: CTCCTTCCTGCAGTCGTTCCAGGGTTTCTTCGTGTC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGTCTGCTTGATGCTGTaGAAGCTGATCCGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLVCLML*KLIRVG
Trigger: ACCCACACGGATCAGCTTCCACAGCATCAAGCAGAC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTGTCTGCTTGATGCTGTaGAAGCTGATCCGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGVCLML*KLIRVG
Trigger: ACCCACACGGATCAGCTTCCACAGCATCAAGCAGAC...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACTGCAGACATCTGACTaGCTCTTCTCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLALQTSD*LFSGGP
Trigger: AGGACCCCCTGAGAAGAGCCAGTCAGATGTCTGCAG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGCCAGAGAGGCTGGGATaGGCAAATGCCTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRPERLG*ANACRH
Trigger: ATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGG...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTAAACTGATCCTTTGCTaGCGTACCCCACCCAACTGC +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLKLILC*RTPPNC
Trigger: GCAGTTGGGTGGGGTACGCCAGCAAAGGATCAGTTT...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTCTAGGTGACAGCCCCTaGGATAAGGCAGCCAAACTG +
Preference number: 4 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCLGDSP*DKAAKL
Trigger: CAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAG...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACACACAGGAACAAGGGTaGGGTACAAGTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNTQEQG*GTSEPL
Trigger: GAGAGGCTCACTTGTACCCCACCCTTGTTCCTGTGT...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCCCCAAGGCGGGAGGATaGCTGGGGAGGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSPKAGG*LGRGHR
Trigger: CCTGTGTCCCCTCCCCAGCCATCCTCCCGCCTTGGG...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTCCCGCACGATGCAACTaGTTGACTAAGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGPARCN*LTKDVA
Trigger: AGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGG...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CAA 72 bp GATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTaGCTGGATGAGCTGCACACCTCCTCCAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: DSRALAFGTGPG*LDELHTSSRLN
Trigger: ATTCAGCCTGGAGGAGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAAATTCAAGACCAGCCTaGGAGGTTGGTGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: ERKPGLEACILHGAPKAGNSRPA*EVGEGH
Trigger: ATGACCCTCACCAACCTCTCAGGCTGGTCTTGAATT...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR TCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACACACTGTGAGTAGTTaGTCTTTGAGGCCCACGTCC +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAHTVSS*SLRPTS
Trigger: GGACGTGGGCCTCAAAGATCAACTACTCACAGTGTG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTGTGATGAGGTTCCAGTaGATCACATTCCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGVMRFQ*ITFRRQ
Trigger: CTGTCTGCGGAATGTGATTCACTGGAACCTCATCAC...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GCATTCCGGGTCGTGTTGTACTTGACGCCGTTGAAGTACTCGGGGCACGGCCTCGGATGCACCATCCGATaGAGAGGAAGAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: AFRVVLYLTPLKYSGHGLGCTIR*RGRGTC
Trigger: GCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCC...GAGGCCGTGCCCCGAGTACTTCAACGGCGTCAAGTACAACACGACCCGGAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGAGCGCACCTCTCCATTaGAGAAGCAGTAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLSAPLH*RSSRRQ
Trigger: CTGTCTTCTACTGCTTCTTCAATGGAGAGGTGCGCT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
CDS-3UTR TCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGATAAGGCAGCCAAACTaGTCCTTTGCTGGCGTACCC +
Preference number: 4 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRIRQPN*SFAGVP
Trigger: GGGTACGCCAGCAAAGGATCAGTTTGGCTGCCTTAT...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGCACGATGCAACTGGTTaGCTAAGGATGTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKAHDATG*LRMWLP
Trigger: GGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTG...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGCTTCGGGTGCCTGGGTaGCTTGACCTGAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLLRVPG*LDLRGG
Trigger: GCCTCCCCTCAGGTCAAGTCACCCAGGCACCCGAAG...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACAGTGCGCGCCCGGCGTaGCTGCGAGGGAGTGGACGC +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENSARPA*LRGSGR
Trigger: GCGTCCACTCCCTCGCAGTCACGCCGGGCGCGCACT...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTCCCAGCTCTCTCCATTaGAGAAGCAGTAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLPSSLH*RSSRRQ
Trigger: CTGTCTTCTACTGCTTCTTCAATGGAGAGAGCTGGG...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS-3UTR GCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGGGCACCAGACCTCATTaGTCTCGTGCACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMGTRPH*SRALHG
Trigger: ACCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCC...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCATAGTAGAGCTTGCCGATGGAGGACAGGGGAGCTGTaGAGGTGGGCGACCGAGGGG +
Preference number: 4 (lower is better)
Translates to: QAPCQTSTVHSHSRACRWRTGEL*RWATEG
Trigger: CCCCTCGGTCGCCCACCTGCACAGCTCCCCTGTCCT...CCATCGGCAAGCTCTACTATGAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp CGATCTGGTCCAAGGTCGTGTTGCAGTAGGAGTAGGGACCTTGGCAGAAGAGCTTGCCCCACGAGAGCCTaGCCAGCACAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: RSGPRSCCSRSRDLGRRACPTRA*PAQRTQ
Trigger: CTGGGTTCTCTGTGCTGGGCAGGCTCTCGTGGGGCA...AGCTCTTCTGCCAAGGTCCCTACTCCTACTGCAACACGACCTTGGACCAGATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCGCAGTCCCCCTTGGCTaGCGCACCCCCTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVAVPLG*RTPSFL
Trigger: CAGGAAAGAGGGGGTGCGGCAGCCAAGGGGGACTGC...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCCTCATCCCTGTCCCTTaGAGTCCCCCTTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DVVHQVARLLAKPALFILLIPVP*SPPWLP
Trigger: CGGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAG...GAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGCGTCTTCCTTGATTaGCTAATCTGTGGACTAGGC +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLGVFLD*LICGLG
Trigger: GCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCC...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCCTGGGGGTTAGGGACTaGAGCCTGCTGCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSLGVRD*SLLPST
Trigger: CGTGCTGGGCAGCAGGCTCCAGTCCCTAACCCCCAG...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTTGTCTCGGATGTGGTaGACGCGCGTAACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLLSRMW*TRVTLS
Trigger: TGACAAAGTTACGCGCGTCCACCACATCCGAGACAA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGGATTGTCTCGGATGTaGTGGACGCGCGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAGLSRM*WTRVTL
Trigger: CAAAGTTACGCGCGTCCACCACATCCGAGACAATCC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp ACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCTGCTGACTGCCTTCCTGTACTaGATTGTCTCGGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: TECGGQGPVQGHTIAWLLTAFLY*IVSDVV
Trigger: CACCACATCCGAGACAATCCAGTACAGGAAGGCAGT...CAGCAGCCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTGACACGAAGAAACCCTaGAACGACTGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SDPATILGPHHSSGAWVTDTKKP*NDCRKE
Trigger: CTCCTTCCTGCAGTCGTTCCAGGGTTTCTTCGTGTC...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTTCTTTCCTGCCAGGCTaGAGAGCTGGTCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VRPWPERLGWANACRHLTSFLPG*RAGLSP
Trigger: AGGGGAGAGACCAGCTCTCCAGCCTGGCAGGAAAGA...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCGGCCCAGTAAGGCCCTaGCCAGAGAGGCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVGPVRP*PERLGW
Trigger: CCATCCCAGCCTCTCTGGCCAGGGCCTTACTGGGCC...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGAATAGCTGTGTGTGTTaGACAGGTCCTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWNSCVC*TGPSLL
Trigger: GAGCAGAGAAGGACCTGTCCAACACACACAGCTATT...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGCTAGGTGACAGCCCCTaGGATAAGGCAGCCAAACTG +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLLGDSP*DKAAKL
Trigger: CAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAG...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGACACAGGAACAAGGGTaGGGTACAAGTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKATQEQG*GTSEPL
Trigger: GAGAGGCTCACTTGTACCCCACCCTTGTTCCTGTGT...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTACACAGGAACAAGGGTaGGGTACAAGTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SDPATILGPHHSSGAWVTTQEQG*GTSEPL
Trigger: GAGAGGCTCACTTGTACCCCACCCTTGTTCCTGTGT...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGCCCGCACGATGCAACTaGTTGACTAAGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKAPARCN*LTKDVA
Trigger: AGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGG...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGCACACTGTGAGTAGTTaGTCTTTGAGGCCCACGTCC +
Preference number: 4 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWHTVSS*SLRPTS
Trigger: GGACGTGGGCCTCAAAGATCAACTACTCACAGTGTG...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTAGTGGCCCAGGTAGTTaGCGACAAGGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRSGPGS*RQGRCG
Trigger: ACCGCATCGCCCTTGTCGTCAACTACCTGGGCCACT...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGTGATGAGGTTCCAGTaGATCACATTCCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAVMRFQ*ITFRRQ
Trigger: CTGTCTGCGGAATGTGATTCACTGGAACCTCATCAC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGAGCGCACCTCTCCATTaGAGAAGCAGTAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: ERELARGQGPSPLRKMDVSAPLH*RSSRRQ
Trigger: CTGTCTTCTACTGCTTCTTCAATGGAGAGGTGCGCT...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341843.8
ENST00000471646.6
CDS-3UTR TCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAAGCGCACCTCTCCATTaGAGAAGCAGTAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLASAPLH*RSSRRQ
Trigger: CTGTCTTCTACTGCTTCTTCAATGGAGAGGTGCGCT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
CDS-3UTR TCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCGGTGCCTGGGTGACTTaGCCTGAGGGGAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVGAWVT*PEGRPL
Trigger: AAGTGGCCTCCCCTCAGGTCAAGTCACCCAGGCACC...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATTGGAAGAAATGGCCTaGTGCTTCTCTCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLALEEMA*CFSLPD
Trigger: GTCAGGGAGAGAGAAGCATCAGGCCATTTCTTCCAA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGTCATGGTCAACGAGCTaGAGCAGGAACCACATGACA +
Preference number: 4 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRSWSTS*SRNHMT
Trigger: TGTCATGTGGTTCCTGCTGCAGCTCGTTGACCATGA...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGACCTCATTGCTCTCGTaGACTTCATGGTCAACGAGC +
Preference number: 4 (lower is better)
Translates to: QERKPGLEACILHGAPKATSLLS*TSWSTS
Trigger: GCTCGTTGACCATGAAGTGCACGAGAGCAATGAGGT...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAACCTCATTGCTCTCGTaGACTTCATGGTCAACGAGC +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLATSLLS*TSWSTS
Trigger: GCTCGTTGACCATGAAGTGCACGAGAGCAATGAGGT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGACCTCATTGCTCTCGTaGACTTCATGGTCAACGAGC +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMTSLLS*TSWSTS
Trigger: GCTCGTTGACCATGAAGTGCACGAGAGCAATGAGGT...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCAGGCACCAGACCTCATTaGTCTCGTGCACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSGTRPH*SRALHG
Trigger: ACCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCC...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGGGCACCAGACCTCATTaGTCTCGTGCACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWGTRPH*SRALHG
Trigger: ACCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCC...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCTGCCCCACGAGAGCCTaGCCAGCACAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSCPTRA*PAQRTQ
Trigger: CTGGGTTCTCTGTGCTGGGCAGGCTCTCGTGGGGCA...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCGAGGCCAAGGGCCAGTaGAGGGCCACACCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSEAKGQ*RATPLP
Trigger: AGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTC...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTTTTTGCCCCGCACGATaGAACTGGTTGACTAAGGAT +
Preference number: 4 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGFCPAR*NWLTKD
Trigger: ATCCTTAGTCAACCAGTTGCATCGTGCGGGGCAAAA...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTCTCTGCTCCTCATTTTaGCCCGCACGATGCAACTGG +
Preference number: 4 (lower is better)
Translates to: VRPWPERLGWANACRHLTLCSSF*PARCNW
Trigger: CCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAG...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTGCCAAGCCTGGAAGCTaGCCTGGTGGTCAACTGAGG +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRAKPGS*PGGQLR
Trigger: CCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGC...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCTCTCTCCCTGACTCCTaGGGCTCCGCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVSLPDS*GSAAGT
Trigger: TGTCCCTGCAGCGGAGCCGCAGGAGTCAGGGAGAGA...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGTCTCTCCCTGACTCCTaGGGCTCCGCTGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLSLPDS*GSAAGT
Trigger: TGTCCCTGCAGCGGAGCCGCAGGAGTCAGGGAGAGA...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCACAGGGGCTGGTCTTTaGGCATCTGGCTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVTGAGL*ASGSAR
Trigger: CCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGT...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLARVMMV*QYCSRS
Trigger: ACTTCTGGAGCAGTACTGCCACACCATCATGACCCT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
CDS-3UTR CCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTCAGCACGTTCCGATCTaGTCCAAGGTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VRPWPERLGWANACRHLTQHVPI*SKVVLQ
Trigger: CTGCAACACGACCTTGGACCAGATCGGAACGTGCTG...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATTGTCTCGGATGTGGTaGACGCGCGTAACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLALSRMW*TRVTLS
Trigger: TGACAAAGTTACGCGCGTCCACCACATCCGAGACAA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGTTGTCTCGGATGTGGTaGACGCGCGTAACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: AHQIPEPWPLGQALACWMLSRMW*TRVTLS
Trigger: TGACAAAGTTACGCGCGTCCACCACATCCGAGACAA...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCAGGATTGTCTCGGATGTaGTGGACGCGCGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSGLSRM*WTRVTL
Trigger: CAAAGTTACGCGCGTCCACCACATCCGAGACAATCC...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAACTGCCTTCCTGTACTaGATTGTCTCGGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLATAFLY*IVSDVV
Trigger: CACCACATCCGAGACAATCCAGTACAGGAAGGCAGT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGACTGCCTTCCTGTACTaGATTGTCTCGGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRTAFLY*IVSDVV
Trigger: CACCACATCCGAGACAATCCAGTACAGGAAGGCAGT...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACGCAGGAGCACCAGGGTaGCCTTCACTGCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GISLVGVIRDRPACRCFDAGAPG*PSLPSC
Trigger: ACAGGAAGGCAGTGAAGGCCACCCTGGTGCTCCTGC...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGACACGAAGAAACCCTaGAACGACTGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLDTKKP*NDCRKE
Trigger: CTCCTTCCTGCAGTCGTTCCAGGGTTTCTTCGTGTC...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGGCAGGGGAGCCCTGTGTCTGCTACTATAAATAGCTGTGTGTGTTGGACAGGTCCTTGCAGTCCCCCTTaGCTGCCGCACCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GQGSPVSATINSCVCWTGPCSPP*LPHPLF
Trigger: AAAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGG...ACCTGTCCAACACACACAGCTATTTATAGTAGCAGACACAGGGCTCCCCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCCCTTGCAGTCCCCCTTaGCTGCCGCACCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSPCSPP*LPHPLF
Trigger: AAAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGG...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGAAACTGATCCTTTGCTaGCGTACCCCACCCAACTGC +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLKLILC*RTPPNC
Trigger: GCAGTTGGGTGGGGTACGCCAGCAAAGGATCAGTTT...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCAGCCTGCATCCTTCATaGAGCCCCCAAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVSLHPS*SPQGGR
Trigger: CCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCT...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCCCCTTGGTTGGGGGCTaGGGCCAGGTATTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVPLVGG*GQVLAW
Trigger: CCAGGCTAATACCTGGCCCCAGCCCCCAACCAAGGG...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGGCAGGGGAGCCCTGTGTCTGCTACTATAAATAGCTGTGTGTGTTGGACAGGTGCCTGGAAGCTGCCCTaGTGGTCAACTGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GQGSPVSATINSCVCWTGAWKLP*WSTEGP
Trigger: TGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGC...ACCTGTCCAACACACACAGCTATTTATAGTAGCAGACACAGGGCTCCCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCGCCTGGAAGCTGCCCTaGTGGTCAACTGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVAWKLP*WSTEGP
Trigger: TGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGC...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGTGGCCCAGGTAGTTaGCGACAAGGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVSGPGS*RQGRCG
Trigger: ACCGCATCGCCCTTGTCGTCAACTACCTGGGCCACT...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTTCAGGAGCACGAGAATaGTGGGGCCTTGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: VRPWPERLGWANACRHLTSGARE*WGLGRC
Trigger: ACATCTACCAAGGCCCCATCATTCTCGTGCTCCTGA...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCGATGAACATGATCTGTaGCAGGTCGTCCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: DVVHQVARLLAKPALFILDEHDL*QVVLPG
Trigger: CCCGGGGAGGACGACCTGTCACAGATCATGTTCATC...GAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp CGATCTGGTCCAAGGTCGTGTTGCAGTAGGAGTAGGGACCTTGGCAGAAGAGCTCCTCTTCCTCACGGCTaGGCGCACCTCTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: RSGPRSCCSRSRDLGRRAPLPHG*AHLSIE
Trigger: TTCAATGGAGAGGTGCGCTCAGCCGTGAGGAAGAGG...AGCTCTTCTGCCAAGGTCCCTACTCCTACTGCAACACGACCTTGGACCAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTATGAGTTTCAATCACTaGAGACATGGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPMSFNH*RHGWFL
Trigger: CAGAAACCAACCATGTCTTCAGTGATTGAAACTCAT...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTAAGGGCAATGGGGTATaGGTTTCAATCACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLKGNGV*VSITED
Trigger: GTCTTCAGTGATTGAAACTCATACCCCATTGCCCTT...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACAAGGGCAATGGGGTATaGGTTTCAATCACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNKGNGV*VSITED
Trigger: GTCTTCAGTGATTGAAACTCATACCCCATTGCCCTT...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCCCTCTTCCTCACGGCTaGGCGCACCTGATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVPLPHG*AHLIAW
Trigger: CCAAGCAATCAGGTGCGCTCAGCCGTGAGGAAGAGG...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS-3UTR GCA 90 bp AATGATGGGGCCTTGGTAGATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACACACAGCGGCCGTCTaGTTGATGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: NDGALVDVVHQVARLLAKHTAAV*LMLWKL
Trigger: CAGCTTCCACAGCATCAAGCAGACGGCCGCTGTGTG...TTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATCTACCAAGGCCCCATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCCGTACCCCACCCAACTaGAGGGGCACCACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVRTPPN*RGTTEC
Trigger: ACACTCAGTGGTGCCCCTGCAGTTGGGTGGGGTACG...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCATAGTAGAGCTTGCCGATGGACAGGGGCTGGTCTTTaGGCATCTGGCTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: QAPCQTSTVHSHSRACRWTGAGL*ASGSAR
Trigger: CCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGT...CCATCGGCAAGCTCTACTATGAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGTGCCCACAGGGGCTaGTCTTTGGGCATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVSAHRG*SLGIWL
Trigger: GAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACT...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp GCATTCCGGGTCGTGTTGTACTTGACGCCGTTGAAGTACTCGGGGCACGGCCTCCATAATCTCAGCACTTaGGGAAGCCAAGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: AFRVVLYLTPLKYSGHGLHNLST*GSQGRQ
Trigger: CTGCCTACCTTGGCTTCCCCAAGTGCTGAGATTATG...GAGGCCGTGCCCCGAGTACTTCAACGGCGTCAAGTACAACACGACCCGGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCTTGTCATCCAAAATaGGCTCACACTGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLACHPK*AHTVSS
Trigger: ACTACTCACAGTGTGAGCCCATTTTGGATGACAAGC...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGCTTGTCATCCAAAATaGGCTCACACTGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLACHPK*AHTVSS
Trigger: ACTACTCACAGTGTGAGCCCATTTTGGATGACAAGC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTGGATTGTCTCGGATGTaGTGGACGCGCGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: VRPWPERLGWANACRHLTGLSRM*WTRVTL
Trigger: CAAAGTTACGCGCGTCCACCACATCCGAGACAATCC...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCATAGTAGAGCTTGCCGATGGCCTTGCAGTCCCCCTTaGCTGCCGCACCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QAPCQTSTVHSHSRACRWPCSPP*LPHPLF
Trigger: AAAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGG...CCATCGGCAAGCTCTACTATGAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCCCTGGCCAGAGAGGCTaGGATGGGCAAATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVPGQRG*DGQMPA
Trigger: TGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGG...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTGAGGGCAAAGGGCAATaGGGTATGAGTTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: SDPATILGPHHSSGAWVTEGKGQ*GMSFNH
Trigger: GTGATTGAAACTCATACCCCATTGCCCTTTGCCCTC...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGCACTTCCAAGAGGCATaGTTTATTTCACAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: WKPASFMEPPRREDGWGGHFQEA*FISQRA
Trigger: TGCTCTCTGTGAAATAAACCATGCCTCTTGGAAGTG...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCACACTTCCAAGAGGCATaGTTTATTTCACAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSHFQEA*FISQRA
Trigger: TGCTCTCTGTGAAATAAACCATGCCTCTTGGAAGTG...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACTGGAAGCTGCCCTGGTaGTCAACTGAGGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: GISLVGVIRDRPACRCFDWKLPW*STEGPC
Trigger: ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCA...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGGTACCTAGAGCATTaGTTTCTTTTGGAAGAAATG +
Preference number: 4 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPGYLEH*FLLEEM
Trigger: CATTTCTTCCAAAAGAAACCAATGCTCTAGGTACCC...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp CAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCATAGTAGAGCTTGCCGATGGAGTGGCCCAGGTAGTTaGCGACAAGGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: QAPCQTSTVHSHSRACRWSGPGS*RQGRCG
Trigger: ACCGCATCGCCCTTGTCGTCAACTACCTGGGCCACT...CCATCGGCAAGCTCTACTATGAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACGGGACTCGAAGGGAGTaGTGGTCCTGCCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENGTRRE*WSCQRC
Trigger: GCACCGCTGGCAGGACCATCACTCCCTTCGAGTCCC...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCGCTGATCCGTGTGGGTaGTGTAGGGATGGACATGGC +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSADPCG*CRDGHG
Trigger: GCCATGTCCATCCCTACATCACCCACACGGATCAGC...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGCTTCCTCTTGCGCTaGGCCTGGTGGCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENCFLLR*AWWPPL
Trigger: GAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCA...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGAGGGTGGGGTACAAGTaGGCCTCTCTAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLRVGYK*ASLGDS
Trigger: GCTGTCACCTAGAGAGGCTCACTTGTACCCCACCCT...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGAAGGGCAATGGGGTATaGGTTTCAATCACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRKGNGV*VSITED
Trigger: GTCTTCAGTGATTGAAACTCATACCCCATTGCCCTT...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CGATCTGGTCCAAGGTCGTGTTGCAGTAGGAGTAGGGACCTTGGCAGAAGAGCTATGGTGTGGCAGTACTaGTCCAGAAGTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RSGPRSCCSRSRDLGRRAMVWQY*SRSAHR
Trigger: CCTGTGGGCACTTCTGGAGCAGTACTGCCACACCAT...AGCTCTTCTGCCAAGGTCCCTACTCCTACTGCAACACGACCTTGGACCAGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp TGTACTGGATTGTCTCGGATGTGGTGGACGCGCGTAACTTTGTCATTAGGATCCGCACCCCCTCTTTCCTaGCAGGCTGGAGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: CTGLSRMWWTRVTLSLGSAPPLS*QAGELV
Trigger: GACCAGCTCTCCAGCCTGGCAGGAAAGAGGGGGTGC...GGATCCTAATGACAAAGTTACGCGCGTCCACCACATCCGAGACAATCCAGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTGCTGGGATGGGCAAATaGCTGCAGACATCTGACTGG +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRAGMGK*LQTSDW
Trigger: CCAGTCAGATGTCTGCAGGCATTTGCCCATCCCAGC...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGCCTCCTCCATGCCTCTaGTCCTCATTTTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLPPPCL*SSFCPA
Trigger: TGCGGGGCAAAATGAGGAGCAGAGGCATGGAGGAGG...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCCGCGCCCGGCGTGACTaGGAGGGAGTGGACGCGAGA +
Preference number: 4 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRRARRD*EGVDAR
Trigger: TCTCGCGTCCACTCCCTCGCAGTCACGCCGGGCGCG...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGTGGTCTTTGGGCATCTaGCTCTGCCCGGCTGCGTAT +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLWSLGI*LCPAAY
Trigger: ATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCA...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp CAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCATAGTAGAGCTTGCCGATGGAGTGCCCACAGGGGCTaGTCTTTGGGCATCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QAPCQTSTVHSHSRACRWSAHRG*SLGIWL
Trigger: GAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACT...CCATCGGCAAGCTCTACTATGAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCAGCACGTTCCGATCTaGTCCAAGGTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GISLVGVIRDRPACRCFDQHVPI*SKVVLQ
Trigger: CTGCAACACGACCTTGGACCAGATCGGAACGTGCTG...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGCTTGTCATCCAAAATaGGCTCACACTGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAACHPK*AHTVSS
Trigger: ACTACTCACAGTGTGAGCCCATTTTGGATGACAAGC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGGCAGGGGAGCCCTGTGTCTGCTACTATAAATAGCTGTGTGTGTTGGACAGGTTCTTTCCTGCCAGGCTaGAGAGCTGGTCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GQGSPVSATINSCVCWTGSFLPG*RAGLSP
Trigger: AGGGGAGAGACCAGCTCTCCAGCCTGGCAGGAAAGA...ACCTGTCCAACACACACAGCTATTTATAGTAGCAGACACAGGGCTCCCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTCAATCACTGAAGACATaGTTGGTTTCTGCTATTCCC +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLQSLKT*LVSAIP
Trigger: GGGAATAGCAGAAACCAACCATGTCTTCAGTGATTG...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACTTCCAAGAGGCATaGTTTATTTCACAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLHFQEA*FISQRA
Trigger: TGCTCTCTGTGAAATAAACCATGCCTCTTGGAAGTG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
3UTR CAA 72 bp CTCTGCTCCTCATTTTGCCCCGCACGATGCAACTGGTaGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LCSSFCPARCNW*TKDVASLMASS
Trigger: GGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGGGATGCACCATCCGATaGAGAGGAAGAGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLGCTIR*RGRGTC
Trigger: GCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCC...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp AATGATGGGGCCTTGGTAGATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAATCAGGAGCACGAGAATaGTGGGGCCTTGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: NDGALVDVVHQVARLLAKSGARE*WGLGRC
Trigger: ACATCTACCAAGGCCCCATCATTCTCGTGCTCCTGA...TTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATCTACCAAGGCCCCATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTATGAGTTTCAATCACTaGAGACATGGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLMSFNH*RHGWFL
Trigger: CAGAAACCAACCATGTCTTCAGTGATTGAAACTCAT...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCGAGCAGAGATGTTTCTaGAGGGGAGACTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VGVIRDRPACRCFDHKDSEQRCF*RGDWRA
Trigger: TGCCCTCCAGTCTCCCCTTCAGAAACATCTCTGCTC...GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTGGTCCAAGGTCGTGTTaGAGTAGGAGTAGGGACCTT +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRGPRSC*SRSRDL
Trigger: AAGGTCCCTACTCCTACTGCAACACGACCTTGGACC...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR GCA 90 bp GATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCGGTCCAAGGTCGTGTTaGAGTAGGAGTAGGGACCTT +
Preference number: 4 (lower is better)
Translates to: DVVHQVARLLAKPALFILGPRSC*SRSRDL
Trigger: AAGGTCCCTACTCCTACTGCAACACGACCTTGGACC...GAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp CCATTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGGCTCCGGCAGCGCTaGGGGGCCAGCACGTTCCGA +
Preference number: 4 (lower is better)
Translates to: PFDQPWHMCVCCIEELFQGLRQR*GASTFR
Trigger: TCGGAACGTGCTGGCCCCGCAGCGCTGCCGGAGCCC...TTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCGGTCCAAGGTCGTGTTaGAGTAGGAGTAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVGPRSC*SRSRDP
Trigger: AGGGTCCCTACTCCTACTGCAACACGACCTTGGACC...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CGATCTGGTCCAAGGTCGTGTTGCAGTAGGAGTAGGGACCTTGGCAGAAGAGCTGACACGAAGAAACCCTaGAACGACTGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RSGPRSCCSRSRDLGRRADTKKP*NDCRKE
Trigger: CTCCTTCCTGCAGTCGTTCCAGGGTTTCTTCGTGTC...AGCTCTTCTGCCAAGGTCCCTACTCCTACTGCAACACGACCTTGGACCAGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCCAGGCCCTGGCTTGCTaGATGAGCTGCACACCTCCT +
Preference number: 4 (lower is better)
Translates to: LTIKTPNLPEVRERENWPQALAC*MSCTPP
Trigger: AGGAGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTG...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAAGCATTGGTTTCTTTTaGAAGAAATGGCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: ERKPGLEACILHGAPKAGSIGFF*KKWPDA
Trigger: AGCATCAGGCCATTTCTTCCAAAAGAAACCAATGCT...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp ACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGCTGCTGGGGTACCTAGAGCATTaGTTTCTTTTGGAAGAAATG +
Preference number: 4 (lower is better)
Translates to: TECGGQGPVQGHTIAWLLGYLEH*FLLEEM
Trigger: CATTTCTTCCAAAAGAAACCAATGCTCTAGGTACCC...CAGCAGCCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGGTACCTAGAGCATTaGTTTCTTTTGGAAGAAATG +
Preference number: 4 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLGYLEH*FLLEEM
Trigger: CATTTCTTCCAAAAGAAACCAATGCTCTAGGTACCC...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCGGCTCTCTTCCCATTTaGCCAACCCTGGCATATGTG +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVGSLPI*PTLAYV
Trigger: CACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCC...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR TCA 90 bp AATGATGGGGCCTTGGTAGATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAAGTGATGAGGTTCCAGTaGATCACATTCCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: NDGALVDVVHQVARLLAKVMRFQ*ITFRRQ
Trigger: CTGTCTGCGGAATGTGATTCACTGGAACCTCATCAC...TTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATCTACCAAGGCCCCATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGTCAGGAGCACGAGAATaGTGGGGCCTTGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLSGARE*WGLGRC
Trigger: ACATCTACCAAGGCCCCATCATTCTCGTGCTCCTGA...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCATAAGGCAGCCAAACTaGTCCTTTGCTGGCGTACCC +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVIRQPN*SFAGVP
Trigger: GGGTACGCCAGCAAAGGATCAGTTTGGCTGCCTTAT...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp AATGATGGGGCCTTGGTAGATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAAACCTCATTGCTCTCGTaGACTTCATGGTCAACGAGC +
Preference number: 4 (lower is better)
Translates to: NDGALVDVVHQVARLLAKTSLLS*TSWSTS
Trigger: GCTCGTTGACCATGAAGTGCACGAGAGCAATGAGGT...TTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATCTACCAAGGCCCCATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp GGGCAGGGGAGCCCTGTGTCTGCTACTATAAATAGCTGTGTGTGTTGGACAGGTGGCACCAGACCTCATTaGTCTCGTGCACTTCATGGT +
Preference number: 4 (lower is better)
Translates to: GQGSPVSATINSCVCWTGGTRPH*SRALHG
Trigger: ACCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCC...ACCTGTCCAACACACACAGCTATTTATAGTAGCAGACACAGGGCTCCCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCCGCCTCCCTCCTCCATaGCTCTGCTCCTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: LTIKTPNLPEVRERENWPRLPPP*LCSSFC
Trigger: GCAAAATGAGGAGCAGAGGCATGGAGGAGGGAGGCG...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCTTGTCTCGGATGTGGTaGACGCGCGTAACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: DVVHQVARLLAKPALFILLSRMW*TRVTLS
Trigger: TGACAAAGTTACGCGCGTCCACCACATCCGAGACAA...GAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTTTGTCTCGGATGTGGTaGACGCGCGTAACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRLSRMW*TRVTLS
Trigger: TGACAAAGTTACGCGCGTCCACCACATCCGAGACAA...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCGGATTGTCTCGGATGTaGTGGACGCGCGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVGLSRM*WTRVTL
Trigger: CAAAGTTACGCGCGTCCACCACATCCGAGACAATCC...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCGACACGAAGAAACCCTaGAACGACTGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVDTKKP*NDCRKE
Trigger: CTCCTTCCTGCAGTCGTTCCAGGGTTTCTTCGTGTC...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGCAATCACTGAAGACATaGTTGGTTTCTGCTATTCCC +
Preference number: 4 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWQSLKT*LVSAIP
Trigger: GGGAATAGCAGAAACCAACCATGTCTTCAGTGATTG...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACCCTCTTCCTCACGGCTaGGCGCACCTCTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENPLPHG*AHLSIE
Trigger: TTCAATGGAGAGGTGCGCTCAGCCGTGAGGAAGAGG...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341843.8
ENST00000471646.6
CDS-3UTR TCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGATGAGTTTCAATCACTaGAGACATGGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLMSFNH*RHGWFL
Trigger: CAGAAACCAACCATGTCTTCAGTGATTGAAACTCAT...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCACACCTCCTCCAGGCTaGATCAAGCTGCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LTIKTPNLPEVRERENWPTPPPG*IKLPLV
Trigger: AACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGT...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGTCATGGTCAACGAGCTaGAGCAGGAACCACATGACA +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLSWSTS*SRNHMT
Trigger: TGTCATGTGGTTCCTGCTGCAGCTCGTTGACCATGA...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TGTACTGGATTGTCTCGGATGTGGTGGACGCGCGTAACTTTGTCATTAGGATCCTCTCATAGTAGAGCTTaGCGATGGCCCAGGCGACGA +
Preference number: 4 (lower is better)
Translates to: CTGLSRMWWTRVTLSLGSSHSRA*RWPRRR
Trigger: TCGTCGCCTGGGCCATCGGCAAGCTCTACTATGAGA...GGATCCTAATGACAAAGTTACGCGCGTCCACCACATCCGAGACAATCCAGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCGCAGGGCCACACCATTaGCTGGCTGCTGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRAGPHH*LAAGSM
Trigger: CATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGC...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGGTCAACTTAAAAATGTaGAAGACGGGATACATGATT +
Preference number: 4 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLVNLKM*KTGYMI
Trigger: AATCATGTATCCCGTCTTGCACATTTTTAAGTTGAC...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGTTCTGTCACCACCTCTaGTCTGGCTTCTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLFCHHL*SGFSLP
Trigger: TGGAAGAGAGAAGCCAGAGCAGAGGTGGTGACAGAA...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS-3UTR CCA 90 bp CAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCATAGTAGAGCTTGCCGATGGATCCATTCGGATTCTTaGCCAGGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QAPCQTSTVHSHSRACRWIHSDS*PGAVAH
Trigger: GTGAGCCACTGCACCTGGCCAAGAATCCGAATGGAT...CCATCGGCAAGCTCTACTATGAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTAATAGCTGTGTGTGTTaGACAGGTCCTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRNSCVC*TGPSLL
Trigger: GAGCAGAGAAGGACCTGTCCAACACACACAGCTATT...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGAAGCTGCCCTGGTaGTCAACTGAGGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENWKLPW*STEGPC
Trigger: ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCA...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGAGCATTGGTTTCTTTTaGAAGAAATGGCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLSIGFF*KKWPDA
Trigger: AGCATCAGGCCATTTCTTCCAAAAGAAACCAATGCT...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCCACACTGTGAGTAGTTaGTCTTTGAGGCCCACGTCC +
Preference number: 4 (lower is better)
Translates to: LTIKTPNLPEVRERENWPHTVSS*SLRPTS
Trigger: GGACGTGGGCCTCAAAGATCAACTACTCACAGTGTG...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTATCTGGTCCTGCCAGCGGTaGCACCTCTTCCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: DQPWHMCVCCIEELFQGIWSCQR*HLFLTA
Trigger: AGCCGTGAGGAAGAGGTGGCACCGCTGGCAGGACCA...GATACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACGCCAAACTGATCCTTTaGTGGCGTACCCCACCCAAC +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENAKLIL*WRTPPN
Trigger: GTTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGC...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGTTTTGCCCCGCACGATaGAACTGGTTGACTAAGGAT +
Preference number: 4 (lower is better)
Translates to: ARCNWLTKDVASLMASSLFCPAR*NWLTKD
Trigger: ATCCTTAGTCAACCAGTTGCATCGTGCGGGGCAAAA...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACCTCTGCTCCTCATTTTaGCCCGCACGATGCAACTGG +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENLCSSF*PARCNW
Trigger: CCAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAG...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCGGACAGGCCCTGGCTTaGTGGATGAGCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRGQALA*WMSCTP
Trigger: AGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTGTCC...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCATCCATTCGGATTCTTaGCCAGGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LTIKTPNLPEVRERENWPIHSDS*PGAVAH
Trigger: GTGAGCCACTGCACCTGGCCAAGAATCCGAATGGAT...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTGCTTGTCATCCAAAATaGGCTCACACTGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRACHPK*AHTVSS
Trigger: ACTACTCACAGTGTGAGCCCATTTTGGATGACAAGC...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCGAGGGCAAAGGGCAATaGGGTATGAGTTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: PDGVFLDCLICGLGREGVEGKGQ*GMSFNH
Trigger: GTGATTGAAACTCATACCCCATTGCCCTTTGCCCTC...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCCAGGCCCTGGCTTGCTaGATGAGCTGCACACCTCCT +
Preference number: 4 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRQALAC*MSCTPP
Trigger: AGGAGGTGTGCAGCTCATCCAGCAAGCCAGGGCCTG...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACATAAGGCAGCCAAACTaGTCCTTTGCTGGCGTACCC +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENIRQPN*SFAGVP
Trigger: GGGTACGCCAGCAAAGGATCAGTTTGGCTGCCTTAT...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR TCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCTTGGAAGAAATGGCCTaGTGCTTCTCTCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LTIKTPNLPEVRERENWPLEEMA*CFSLPD
Trigger: GTCAGGGAGAGAGAAGCATCAGGCCATTTCTTCCAA...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACAGACCCGCCTGCAGGTaGTTTGACCATAAAGACTCC +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENRPACR*FDHKDS
Trigger: GGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCT...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR GCA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGTCAACTTAAAAATGTaGAAGACGGGATACATGATT +
Preference number: 4 (lower is better)
Translates to: DELHTSSRLNQAALGWGLVNLKM*KTGYMI
Trigger: AATCATGTATCCCGTCTTGCACATTTTTAAGTTGAC...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCGCTTGTCATCCAAAATaGGCTCACACTGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVACHPK*AHTVSS
Trigger: ACTACTCACAGTGTGAGCCCATTTTGGATGACAAGC...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCCTCTCGTGCACTTCATaGTCAACGAGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRLSCTS*STSCSR
Trigger: CCTGCTGCAGCTCGTTGACCATGAAGTGCACGAGAG...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp CCATTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAACATGGCCCGGGCCATaGGGACTCGAAGGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: PFDQPWHMCVCCIEELFQTWPGP*GLEGSD
Trigger: ATCACTCCCTTCGAGTCCCCATGGCCCGGGCCATGT...TTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCCAATCACTGAAGACATaGTTGGTTTCTGCTATTCCC +
Preference number: 4 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVQSLKT*LVSAIP
Trigger: GGGAATAGCAGAAACCAACCATGTCTTCAGTGATTG...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACCCATTTGACCAACCCTaGCATATGTGTGTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GALTIKTPNLPEVRERENPFDQP*HMCVCC
Trigger: GCAACACACACACATATGCCAGGGTTGGTCAAATGG...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCGTCTGCTTGATGCTGTaGAAGCTGATCCGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRVCLML*KLIRVG
Trigger: ACCCACACGGATCAGCTTCCACAGCATCAAGCAGAC...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRRVMMV*QYCSRS
Trigger: ACTTCTGGAGCAGTACTGCCACACCATCATGACCCT...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCCATAATCTCAGCACTTaGGGAAGCCAAGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRHNLST*GSQGRQ
Trigger: CTGCCTACCTTGGCTTCCCCAAGTGCTGAGATTATG...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CCA 90 bp TTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTCAGCACGTTCCGATCTaGTCCAAGGTCGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: FDQPWHMCVCCIEELFQGQHVPI*SKVVLQ
Trigger: CTGCAACACGACCTTGGACCAGATCGGAACGTGCTG...ACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR TCA 90 bp GACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTATCAATTCAAGACCAGCCTaGGAGGTTGGTGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: DQPWHMCVCCIEELFQGINSRPA*EVGEGH
Trigger: ATGACCCTCACCAACCTCTCAGGCTGGTCTTGAATT...GATACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423776.1
ENST00000452278.5
CDS-3UTR TCA 90 bp TTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTGGCTCTCTTCCCATTTaGCCAACCCTGGCATATGTG +
Preference number: 4 (lower is better)
Translates to: FDQPWHMCVCCIEELFQGGSLPI*PTLAYV
Trigger: CACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCC...ACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423776.1
ENST00000452278.5
CDS-3UTR TCA 90 bp CCATTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAACACACTGTGAGTAGTTaGTCTTTGAGGCCCACGTCC +
Preference number: 4 (lower is better)
Translates to: PFDQPWHMCVCCIEELFQHTVSS*SLRPTS
Trigger: GGACGTGGGCCTCAAAGATCAACTACTCACAGTGTG...TTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR GCA 90 bp GACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTATCTCATGGTCAACGAGCTaGAGCAGGAACCACATGACA +
Preference number: 4 (lower is better)
Translates to: DQPWHMCVCCIEELFQGISWSTS*SRNHMT
Trigger: TGTCATGTGGTTCCTGCTGCAGCTCGTTGACCATGA...GATACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp TTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTGTCTGCTTGATGCTGTaGAAGCTGATCCGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: FDQPWHMCVCCIEELFQGVCLML*KLIRVG
Trigger: ACCCACACGGATCAGCTTCCACAGCATCAAGCAGAC...ACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CCA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCAGCATTGGTTTCTTTTaGAAGAAATGGCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: LTIKTPNLPEVRERENWPSIGFF*KKWPDA
Trigger: AGCATCAGGCCATTTCTTCCAAAAGAAACCAATGCT...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CCA 90 bp TTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: FDQPWHMCVCCIEELFQGRVMMV*QYCSRS
Trigger: ACTTCTGGAGCAGTACTGCCACACCATCATGACCCT...ACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423776.1
ENST00000452278.5
CDS-3UTR CCA 90 bp TTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTACTGCCTTCCTGTACTaGATTGTCTCGGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: FDQPWHMCVCCIEELFQGTAFLY*IVSDVV
Trigger: CACCACATCCGAGACAATCCAGTACAGGAAGGCAGT...ACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
3UTR CAA 72 bp GACGCGCGTAACTTTGTCATTAGGATCCTGACGATGTaGAACAGAAATACGAAATTGATCAGGAGCACGAGA +
Preference number: 4 (lower is better)
Translates to: DARNFVIRILTM*NRNTKLIRSTR
Trigger: TCTCGTGCTCCTGATCAATTTCGTATTTCTGTTCAACATCGTCAGGATCCTAATGACAAAGTTACGCGCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS GCA 90 bp GCAGCCGCGTGCGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTGACTaGGAGGGAGTGGACGCGAGAGTGAGCGGCCGAGAGGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: AAACGEGVGVRARRD*EGVDARVSGREGAG
Trigger: CCCCGCGCCCTCTCGGCCGCTCACTCTCGCGTCCACTCCCTCGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS TCA 90 bp TCCCGCAGCCGCGTGCGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTaGCTGCGAGGGAGTGGACGCGAGAGTGAGCGGCCGAGAGGGCGC +
Preference number: 5 (lower is better)
Translates to: SRSRVRRGSGSARPA*LRGSGRESERPRGR
Trigger: GCGCCCTCTCGGCCGCTCACTCTCGCGTCCACTCCCTCGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS GCA 90 bp GCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTaGGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTGACTGCGAGGGA +
Preference number: 5 (lower is better)
Translates to: AGCGAVPRPSRPAAA*GEGVGVRARRDCEG
Trigger: TCCCTCGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS CCA 90 bp CAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTaGGAGTGCGCGCCCGGCGTGACTGCGAGGGAGTGGACGCGAGAG +
Preference number: 5 (lower is better)
Translates to: QCRVHRVPQPRAERE*ECAPGVTAREWTRE
Trigger: CTCTCGCGTCCACTCCCTCGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS CCA 90 bp CAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTaGGAGTGCGCGCCCGGCGTGACTGAGAGGTTGGTGAGGGTCATG +
Preference number: 5 (lower is better)
Translates to: QCRVHRVPQPRAERE*ECAPGVTERLVRVM
Trigger: CATGACCCTCACCAACCTCTCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445981.5
CDS-3UTR CAA 90 bp GCCAGGCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGCTGCCCGGCTGCGTATaGGAGCGGCGGTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ARLQLASSRLWSSAASIALPGCV*ERRWEE
Trigger: CTCCTCCCACCGCCGCTCCAATACGCAGCCGGGCAG...CGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS CCA 90 bp AGCTCTTCAGCCAGCGCCAGGCTGCAGTTGGCCTCCAGCAGGCTGTaGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGA +
Preference number: 5 (lower is better)
Translates to: SSSASARLQLASSRL*SSAASIASRSRVRR
Trigger: TCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGCCTGGCGCTGGCTGAAGAGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTGACTGACCAGCCTGAGAGGTaGGTGAGGGTCATGATGGTG +
Preference number: 5 (lower is better)
Translates to: RVPQPRAEREWECAPGVTDQPER*VRVMMV
Trigger: CACCATCATGACCCTCACCAACCTCTCAGGCTGGTC...AGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CAA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGTCTCCCGGGCAGCCTTaGGGCGCCACCTCCGGTCGC +
Preference number: 5 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWSPGQP*GATSGR
Trigger: GCGACCGGAGGTGGCGCCCAAAGGCTGCCCGGGAGA...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGCGCGCCCGGCGTGACTaGGCAGAAGAGCTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: CGAVPRPSRPAAACGEGVRARRD*AEELRK
Trigger: TTTCCTCAGCTCTTCTGCCAAGTCACGCCGGGCGCG...CACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CAA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGCTGCCCGGCTGCGTATaGGAGCGGCGGTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ERELARGQGPSPLRKMDVLPGCV*ERRWEE
Trigger: CTCCTCCCACCGCCGCTCCAATACGCAGCCGGGCAG...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CAA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACTGCCCGGCTGCGTATaGGAGCGGCGGTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SASSCAEPGGPHSSLSLALPGCV*ERRWEE
Trigger: CTCCTCCCACCGCCGCTCCAATACGCAGCCGGGCAG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
CDS-3UTR CAA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAACTCATCCCTGTCCCTaGCAGTCCCCCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRTHPCP*QSPLAA
Trigger: GGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAGT...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCACTGCCCGGCTGCGTATaGGAGCGGCGGTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSLPGCV*ERRWEE
Trigger: CTCCTCCCACCGCCGCTCCAATACGCAGCCGGGCAG...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCACAGGGGCTGGTCTTaGGGCATCTGGCTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGHRGWS*GIWLCP
Trigger: CGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGTG...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CAA 90 bp GCCGTTGAAGTACTCGGGGCACGGCCTCTCCACGAGGGCTCCGGCAGCGCTGCGCGGGTCGTGTTGTACTaGACGCCGTTGAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: AVEVLGARPLHEGSGSAARVVLY*TPLKYS
Trigger: CGAGTACTTCAACGGCGTCAAGTACAACACGACCCG...CGCAGCGCTGCCGGAGCCCTCGTGGAGAGGCCGTGCCCCGAGTACTTCAACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAAAGAGGAAGAGGCACTaGCGCAGGCGCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRKRKRH*RRRSVE
Trigger: CTCCACTGAGCGCCTGCGCAAGTGCCTCTTCCTCTT...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACCCTTGCAGTCCCCCTaGGCTGCCGCACCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAPLQSP*AAAPPL
Trigger: AAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGGG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGCCCTTGCAGTCCCCCTaGGCTGCCGCACCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: AHQIPEPWPLGQALACWMPLQSP*AAAPPL
Trigger: AAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGGG...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCAACCCAGCCACGATCCTaGGCCCACACCACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: PTRGQRERELARGQGPSPTQPRS*AHTTLR
Trigger: CCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGT...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGACCAGATTCCAGAGCCTaGGCCTTTGGGACAGGCCCT +
Preference number: 5 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRPDSRA*AFGTGP
Trigger: AGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGG...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS CCA 90 bp TGGTGTGGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTGGTCTTTaGGCATCTGGCTCTGCCCGGCTGCGTATTGGAGCGGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: WCGSTAPEVPTGAGL*ASGSARLRIGAAVG
Trigger: TCCCACCGCCGCTCCAATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000423776.1
ENST00000445981.5
ENST00000452278.5
ENST00000462882.1
CDS-3UTR CAA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTTTGTACTTGACGCCGTaGAAGTACTCGGGGCACGGC +
Preference number: 5 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPLYLTP*KYSGHG
Trigger: GCCGTGCCCCGAGTACTTCAACGGCGTCAAGTACAA...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGATTGTACTTGACGCCGTaGAAGTACTCGGGGCACGGC +
Preference number: 5 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRLYLTP*KYSGHG
Trigger: GCCGTGCCCCGAGTACTTCAACGGCGTCAAGTACAA...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCACTCATCCCTGTCCCTaGCAGTCCCCCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGTHPCP*QSPLAA
Trigger: GGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAGT...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGCAGGGCCACACCATaGCCTGGCTGCTGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNCRATP*PGCWLH
Trigger: ATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGCA...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTACCCAGCCACGATCCTaGGCCCACACCACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLTQPRS*AHTTLR
Trigger: CCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGT...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS CCA 90 bp TGCGCGCCCGGCGTGACTGAGAGGTTGGTGAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTGGTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: CAPGVTERLVRVMMV*QYCSRSAHRGWSLG
Trigger: GCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGTCACGCCGGGCGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445981.5
CDS-3UTR CAA 90 bp AGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGCCAAGGTAGGCAGATaGCTTGAGCACAGGAATTCA +
Preference number: 5 (lower is better)
Translates to: SRLWSSAASIASRSRVRRAKVGR*LEHRNS
Trigger: TGAATTCCTGTGCTCAAGCAATCTGCCTACCTTGGC...TCTCCGCACGCGGCTGCGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CAA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCATTGTACTTGACGCCGTaGAAGTACTCGGGGCACGGC +
Preference number: 5 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSLYLTP*KYSGHG
Trigger: GCCGTGCCCCGAGTACTTCAACGGCGTCAAGTACAA...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGAAGAGGAAGAGGCACTaGCGCAGGCGCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLKRKRH*RRRSVE
Trigger: CTCCACTGAGCGCCTGCGCAAGTGCCTCTTCCTCTT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTCCCTTGCAGTCCCCCTaGGCTGCCGCACCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: VRPWPERLGWANACRHLTPLQSP*AAAPPL
Trigger: AAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGGG...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAACTCATCCCTGTCCCTaGCAGTCCCCCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SASSCAEPGGPHSSLSLATHPCP*QSPLAA
Trigger: GGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAGT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGTGCAGGGCCACACCATaGCCTGGCTGCTGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: AHQIPEPWPLGQALACWMCRATP*PGCWLH
Trigger: ATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGCA...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGACCCAGCCACGATCCTaGGCCCACACCACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: ERELARGQGPSPLRKMDVTQPRS*AHTTLR
Trigger: CCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGT...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS GCA 90 bp GAGGTTGGTGAGGGTCATGATGGTGTGGCAGTACTGCTCCAGAAGTaGCCACAGGGGCTGGTCTTTGGGCATCTGGCTCTGCCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: EVGEGHDGVAVLLQK*PQGLVFGHLALPGC
Trigger: GCAGCCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000423776.1
ENST00000445981.5
ENST00000452278.5
ENST00000462882.1
CDS CCA 90 bp GTCATGATGGTGTGGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTaGTCTTTGGGCATCTGGCTCTGCCCGGCTGCGTATTGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: VMMVWQYCSRSAHRG*SLGIWLCPAAYWSG
Trigger: GCCGCTCCAATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000423776.1
ENST00000445981.5
ENST00000452278.5
ENST00000462882.1
CDS-3UTR CAA 90 bp GCTGCAGTTGGCCTCCAGCAGGCTGTGGAGCAGTGCCGCGTCCATCGCGTCCCGAGGCTCTCTTCCCATTaGACCAACCCTGGCATATGT +
Preference number: 5 (lower is better)
Translates to: AAVGLQQAVEQCRVHRVPRLSSH*TNPGIC
Trigger: ACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCCT...CGGGACGCGATGGACGCGGCACTGCTCCACAGCCTGCTGGAGGCCAACTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423776.1
CDS-3UTR CAA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCAGCATTCCGGGTCGTGTaGTACTTGACGCCGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PTRGQRERELARGQGPSPAFRVV*YLTPLK
Trigger: CTTCAACGGCGTCAAGTACAACACGACCCGGAATGC...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACCGGCACCAGACCTCATaGCTCTCGTGCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNRHQTS*LSCTSW
Trigger: CCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCCG...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCGGCACCAGACCTCATaGCTCTCGTGCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLRHQTS*LSCTSW
Trigger: CCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCCG...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGAGGTCGCCAGGCTCCTaGCCAAACCAGCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLRSPGS*PNQHCS
Trigger: TGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACCTTCCTGTACTGGATaGTCTCGGATGTGGTGGACG +
Preference number: 5 (lower is better)
Translates to: PTRGQRERELARGQGPSPPSCTG*SRMWWT
Trigger: CGTCCACCACATCCGAGACAATCCAGTACAGGAAGG...TGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACACAGCGGCCGTCTGCTaGATGCTGTGGAAGCTGATC +
Preference number: 5 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNTAAVC*MLWKLI
Trigger: GATCAGCTTCCACAGCATCAAGCAGACGGCCGCTGT...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGACAGCGGCCGTCTGCTaGATGCTGTGGAAGCTGATC +
Preference number: 5 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLTAAVC*MLWKLI
Trigger: GATCAGCTTCCACAGCATCAAGCAGACGGCCGCTGT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGTGGCCTTCACTGCCTTCCTGTACTGGATTGTCTCGGATGTGGTGGACGCGCGACTCATCCCTGTCCCTaGCAGTCCCCCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GGLHCLPVLDCLGCGGRATHPCP*QSPLAA
Trigger: GGCAGCCAAGGGGGACTGCAAGGGACAGGGATGAGT...CGCGCGTCCACCACATCCGAGACAATCCAGTACAGGAAGGCAGTGAAGGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp GGGCAGGGGAGCCCTGTGTCTGCTACTATAAATAGCTGTGTGTGTTGGACAGGTTCTCCCGGGCAGCCTTaGGGCGCCACCTCCGGTCGC +
Preference number: 5 (lower is better)
Translates to: GQGSPVSATINSCVCWTGSPGQP*GATSGR
Trigger: GCGACCGGAGGTGGCGCCCAAAGGCTGCCCGGGAGA...ACCTGTCCAACACACACAGCTATTTATAGTAGCAGACACAGGGCTCCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTGACCAGCCTGAGAGGTaGGTGAGGGTCATGATGGTG +
Preference number: 5 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCDQPER*VRVMMV
Trigger: CACCATCATGACCCTCACCAACCTCTCAGGCTGGTC...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CAA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAGCCAAGGTAGGCAGATaGCTTGAGCACAGGAATTCA +
Preference number: 5 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRAKVGR*LEHRNS
Trigger: TGAATTCCTGTGCTCAAGCAATCTGCCTACCTTGGC...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CAA 90 bp CTGCGGCTCCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTAGGCTCTCTTCCCATTaGACCAACCCTGGCATATGT +
Preference number: 5 (lower is better)
Translates to: LRLRCRDTGTEAKPGSCPRLSSH*TNPGIC
Trigger: ACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCCT...AGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGGAGCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CAA 90 bp GGCACCACTGAGTGTGGAGGCCAAGGGCCAGTGCAGGGCCACACCATTGCCTGGGTAGGAGTAGGGACCTaGGCAGAAGAGCTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: GTTECGGQGPVQGHTIAWVGVGT*AEELRK
Trigger: TTTCCTCAGCTCTTCTGCCAAGGTCCCTACTCCTAC...CCAGGCAATGGTGTGGCCCTGCACTGGCCCTTGGCCTCCACACTCAGTGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CAA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATTGTACTTGACGCCGTaGAAGTACTCGGGGCACGGC +
Preference number: 5 (lower is better)
Translates to: SASSCAEPGGPHSSLSLALYLTP*KYSGHG
Trigger: GCCGTGCCCCGAGTACTTCAACGGCGTCAAGTACAA...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCATTCCGGGTCGTGTaGTACTTGACGCCGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PSASSCAEPGGPHSSLSLAFRVV*YLTPLK
Trigger: CTTCAACGGCGTCAAGTACAACACGACCCGGAATGC...AAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGAGGTCGCCAGGCTCCTaGCCAAACCAGCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRRSPGS*PNQHCS
Trigger: TGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCT...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACCCTTCCTGTACTGGATaGTCTCGGATGTGGTGGACG +
Preference number: 5 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNPSCTG*SRMWWT
Trigger: CGTCCACCACATCCGAGACAATCCAGTACAGGAAGG...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GAGAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGACAGCGGCCGTCTGCTaGATGCTGTGGAAGCTGATC +
Preference number: 5 (lower is better)
Translates to: ERELARGQGPSPLRKMDVTAAVC*MLWKLI
Trigger: GATCAGCTTCCACAGCATCAAGCAGACGGCCGCTGT...CACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTACAGCGGCCGTCTGCTaGATGCTGTGGAAGCTGATC +
Preference number: 5 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCTAAVC*MLWKLI
Trigger: GATCAGCTTCCACAGCATCAAGCAGACGGCCGCTGT...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCCCCTTGCAGTCCCCCTaGGCTGCCGCACCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: DVVHQVARLLAKPALFILPLQSP*AAAPPL
Trigger: AAGAGGGGGTGCGGCAGCCAAGGGGGACTGCAAGGG...GAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAAGCCAAACTGATCCTTaGCTGGCGTACCCCACCCAA +
Preference number: 5 (lower is better)
Translates to: ERKPGLEACILHGAPKAGSQTDP*LAYPTQ
Trigger: TTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGCT...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TCAGACCCAGCCACGATCCTTGGCCCACACCACTCTTCGGGTGCCTGGGTGACTCCTCTGCTCCTCATTTaGCCCCGCACGATGCAACTG +
Preference number: 5 (lower is better)
Translates to: SDPATILGPHHSSGAWVTPLLLI*PRTMQL
Trigger: CAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAGG...AGTCACCCAGGCACCCGAAGAGTGGTGTGGGCCAAGGATCGTGGCTGGGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GATGAGCTGCACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGCCAGATTCCAGAGCCTaGGCCTTTGGGACAGGCCCT +
Preference number: 5 (lower is better)
Translates to: DELHTSSRLNQAALGWGLPDSRA*AFGTGP
Trigger: AGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGG...CAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTGCAGCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS GCA 90 bp GACCAGCCTGAGAGGTTGGTGAGGGTCATGATGGTGTGGCAGTACTaGTCCAGAAGTGCCCACAGGGGCTGGTCTTTGGGCATCTGGCTC +
Preference number: 5 (lower is better)
Translates to: DQPERLVRVMMVWQY*SRSAHRGWSLGIWL
Trigger: GAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000423776.1
ENST00000452278.5
CDS GCA 90 bp GGCGTGACTGAGAGGTTGGTGAGGGTCATGATGGTGTGGCAGTACTaGTCCAGAAGTGCCCACAGGGGCTGGTCTTTGGGCATCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GVTERLVRVMMVWQY*SRSAHRGWSLGIWL
Trigger: GAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGTCACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445981.5
CDS GCA 90 bp CCTGAGCCTGAGAGGTTGGTGAGGGTCATGATGGTGTGGCAGTACTaGTCCAGAAGTGCCCACAGGGGCTGGTCTTTGGGCATCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PEPERLVRVMMVWQY*SRSAHRGWSLGIWL
Trigger: GAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS CCA 90 bp AGTGGCAAGCCTGAGCCTGAGAGGTTGGTGAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTGGTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SGKPEPERLVRVMMV*QYCSRSAHRGWSLG
Trigger: GCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTCAGGCTTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS CCA 90 bp CTCCTGAATGCCAGCCCAGCTGACTTCCATCGTGGGAGCTGGGAATaGGGAGTGGCCTCCCAGCCAAGCCCTTCATTATCAGTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: LLNASPADFHRGSWE*GVASQPSPSLSVAS
Trigger: GCTTGCCACTGATAATGAAGGGCTTGGCTGGGAGGCCACTCCCCATTCCCAGCTCCCACGATGGAAGTCAGCTGGGCTGGCATTCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS-3UTR CAA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTCGGGTCGTGTTGTACTaGACGCCGTTGAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCRVVLY*TPLKYS
Trigger: CGAGTACTTCAACGGCGTCAAGTACAACACGACCCG...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACGGGTCGTGTTGTACTaGACGCCGTTGAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: SASSCAEPGGPHSSLSLARVVLY*TPLKYS
Trigger: CGAGTACTTCAACGGCGTCAAGTACAACACGACCCG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAGCATTCCGGGTCGTGTaGTACTTGACGCCGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAAFRVV*YLTPLK
Trigger: CTTCAACGGCGTCAAGTACAACACGACCCGGAATGC...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGTGGTCAACTGAGGGGCCATGTCTACCCTGCCCACCAGATTCCAGAGCCTTGGCGGCACCAGACCTCATaGCTCTCGTGCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: GGQLRGHVYPAHQIPEPWRHQTS*LSCTSW
Trigger: CCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCCG...CCAAGGCTCTGGAATCTGGTGGGCAGGGTAGACATGGCCCCTCAGTTGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCACCTTCCTGTACTGGATaGTCTCGGATGTGGTGGACG +
Preference number: 5 (lower is better)
Translates to: SASSCAEPGGPHSSLSLAPSCTG*SRMWWT
Trigger: CGTCCACCACATCCGAGACAATCCAGTACAGGAAGG...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGCCTTCCTGTACTGGATaGTCTCGGATGTGGTGGACG +
Preference number: 5 (lower is better)
Translates to: QERKPGLEACILHGAPKAPSCTG*SRMWWT
Trigger: CGTCCACCACATCCGAGACAATCCAGTACAGGAAGG...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GCCCACCAGATTCCAGAGCCTTGGCCTTTGGGACAGGCCCTGGCTTGCTGGATGAATCCATTCGGATTCTaGGCCAGGTGCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: AHQIPEPWPLGQALACWMNPFGF*ARCSGS
Trigger: TGAGCCACTGCACCTGGCCAAGAATCCGAATGGATT...CATCCAGCAAGCCAGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341843.8
CDS-3UTR CAA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAAATCCATTCGGATTCTaGGCCAGGTGCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: SASSCAEPGGPHSSLSLANPFGF*ARCSGS
Trigger: TGAGCCACTGCACCTGGCCAAGAATCCGAATGGATT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341843.8
ENST00000452278.5
CDS-3UTR CAA 90 bp AAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGCACGATGCAACTGGTaGACTAAGGATGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KRGSQAWKPASFMEPPRRARCNW*TKDVAS
Trigger: GGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC...CCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS CCA 90 bp GGAATTCAAGACCAGCCTGAGAGGTTGGTGAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTGGTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GIQDQPERLVRVMMV*QYCSRSAHRGWSLG
Trigger: GCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTGGTCTTGAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000423776.1
ENST00000452278.5
CDS-3UTR CAA 90 bp GATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCAAGAGGAAGAGGCACTaGCGCAGGCGCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: DVVHQVARLLAKPALFILKRKRH*RRRSVE
Trigger: CTCCACTGAGCGCCTGCGCAAGTGCCTCTTCCTCTT...GAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp GCACGATGCAACTGGTTGACTAAGGATGTGGCTTCCCTGATGGCGTCTTCCTTGTGCAGGGCCACACCATaGCCTGGCTGCTGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: ARCNWLTKDVASLMASSLCRATP*PGCWLH
Trigger: ATGGAGCCAGCAGCCAGGCAATGGTGTGGCCCTGCA...CAAGGAAGACGCCATCAGGGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGGAAGGGGATGCACCATCCGATGAAGAGGAAGAGGCACTTGCGCAGGCGCTCAGCCAAGGTAGGCAGATaGCTTGAGCACAGGAATTCA +
Preference number: 5 (lower is better)
Translates to: GKGMHHPMKRKRHLRRRSAKVGR*LEHRNS
Trigger: TGAATTCCTGTGCTCAAGCAATCTGCCTACCTTGGC...TGAGCGCCTGCGCAAGTGCCTCTTCCTCTTCATCGGATGGTGCATCCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGTCATACTTCCTCTGCTaGTCATCCAAAATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLSYFLC*SSKMGS
Trigger: TGAGCCCATTTTGGATGACAAGCAGAGGAAGTATGA...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp AATGATGGGGCCTTGGTAGATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACGGCACCAGACCTCATaGCTCTCGTGCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: NDGALVDVVHQVARLLAKRHQTS*LSCTSW
Trigger: CCATGAAGTGCACGAGAGCAATGAGGTCTGGTGCCG...TTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATCTACCAAGGCCCCATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp GGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCCCCCTCAGAAACAGAAATACGAAATaGATCAGGAGCACGAGAATG +
Preference number: 5 (lower is better)
Translates to: GPRPGPEPTKEDGCGPLRNRNTK*IRSTRM
Trigger: CATTCTCGTGCTCCTGATCAATTTCGTATTTCTGTT...TCTGAGGGGGCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp AATGATGGGGCCTTGGTAGATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAAACAGCGGCCGTCTGCTaGATGCTGTGGAAGCTGATC +
Preference number: 5 (lower is better)
Translates to: NDGALVDVVHQVARLLAKTAAVC*MLWKLI
Trigger: GATCAGCTTCCACAGCATCAAGCAGACGGCCGCTGT...TTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATCTACCAAGGCCCCATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACCCTCTGCTCCTCATTTaGCCCCGCACGATGCAACTG +
Preference number: 5 (lower is better)
Translates to: GISLVGVIRDRPACRCFDPLLLI*PRTMQL
Trigger: CAGTTGCATCGTGCGGGGCAAAATGAGGAGCAGAGG...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTCACTGAAGACATGGTaGGTTTCTGCTATTCCCATC +
Preference number: 5 (lower is better)
Translates to: AAGTQGRKPSLEAALVVNSLKTW*VSAIPI
Trigger: GATGGGAATAGCAGAAACCAACCATGTCTTCAGTGA...GTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CACACCTCCTCCAGGCTGAATCAAGCTGCCCTTGGTTGGGGGCTGGGGCCAGGTTCACTGAAGACATGGTaGGTTTCTGCTATTCCCATC +
Preference number: 5 (lower is better)
Translates to: HTSSRLNQAALGWGLGPGSLKTW*VSAIPI
Trigger: GATGGGAATAGCAGAAACCAACCATGTCTTCAGTGA...ACCTGGCCCCAGCCCCCAACCAAGGGCAGCTTGATTCAGCCTGGAGGAGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GTAAGGCCCTGGCCAGAGAGGCTGGGATGGGCAAATGCCTGCAGACATCTGACTCCGCCTGCAGGTGCTTaGACCATAAAGACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VRPWPERLGWANACRHLTPPAGA*TIKTPN
Trigger: GTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGG...AGTCAGATGTCTGCAGGCATTTGCCCATCCCAGCCTCTCTGGCCAGGGCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GATGTAGTCCACCAGGTCGCCAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCGCATTCCGGGTCGTGTaGTACTTGACGCCGTTGAAG +
Preference number: 5 (lower is better)
Translates to: DVVHQVARLLAKPALFILAFRVV*YLTPLK
Trigger: CTTCAACGGCGTCAAGTACAACACGACCCGGAATGC...GAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCTGGTGGACTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp CCTGATGGCGTCTTCCTTGATTGCCTAATCTGTGGACTAGGCAGAGAAGGGGTCAGGTCGCCAGGCTCCTaGCCAAACCAGCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: PDGVFLDCLICGLGREGVRSPGS*PNQHCS
Trigger: TGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCT...GACCCCTTCTCTGCCTAGTCCACAGATTAGGCAATCAAGGAAGACGCCATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCGCTGCAGGGACACAGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAAACAGAAATACGAAATaGATCAGGAGCACGAGAATG +
Preference number: 5 (lower is better)
Translates to: PLQGHRDGSQAWKLPWWSNRNTK*IRSTRM
Trigger: CATTCTCGTGCTCCTGATCAATTTCGTATTTCTGTT...TGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCTGTGTCCCTGCAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGATGGCTGGGGAGGGAGGATCCTGACGATGTaGAACAGAAATACGAAATTG +
Preference number: 5 (lower is better)
Translates to: WKPASFMEPPRREDGWGGRILTM*NRNTKL
Trigger: CAATTTCGTATTTCTGTTCAACATCGTCAGGATCCT...CCCTCCCCAGCCATCCTCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGAGGGGTACCTAGAGCATaGGTTTCTTTTGGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: ERKPGLEACILHGAPKAGGVPRA*VSFGRN
Trigger: ATTTCTTCCAAAAGAAACCAATGCTCTAGGTACCCC...TCCCGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS TCA 90 bp GCCAAGGTAGGCAGATTGCTTGAGCACAGGAATTCAAGACCAGCCTaGGAGGTTGGTGAGGGTCATGATGGTGTGGCAGTACTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: AKVGRLLEHRNSRPA*EVGEGHDGVAVLLQ
Trigger: CTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTGGTCTTGAATTCCTGTGCTCAAGCAATCTGCCTACCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000423776.1
ENST00000452278.5
CDS-3UTR CAA 90 bp CAGGCTCCTTGCCAAACCAGCACTGTTCATTCTCATAGTAGAGCTTGCCGATGGGACCAGCCTGAGAGGTaGGTGAGGGTCATGATGGTG +
Preference number: 5 (lower is better)
Translates to: QAPCQTSTVHSHSRACRWDQPER*VRVMMV
Trigger: CACCATCATGACCCTCACCAACCTCTCAGGCTGGTC...CCATCGGCAAGCTCTACTATGAGAATGAACAGTGCTGGTTTGGCAAGGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp GGGCAGGGGAGCCCTGTGTCTGCTACTATAAATAGCTGTGTGTGTTGGACAGGTCGGGTCGTGTTGTACTaGACGCCGTTGAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: GQGSPVSATINSCVCWTGRVVLY*TPLKYS
Trigger: CGAGTACTTCAACGGCGTCAAGTACAACACGACCCG...ACCTGTCCAACACACACAGCTATTTATAGTAGCAGACACAGGGCTCCCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGTGGCCTTCACTGCCTTCCTGTACTGGATTGTCTCGGATGTGGTGGACGCGCGTCATACTTCCTCTGCTaGTCATCCAAAATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: GGLHCLPVLDCLGCGGRASYFLC*SSKMGS
Trigger: TGAGCCCATTTTGGATGACAAGCAGAGGAAGTATGA...CGCGCGTCCACCACATCCGAGACAATCCAGTACAGGAAGGCAGTGAAGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCAAGAGGAAGAGGCACTaGCGCAGGCGCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: LTIKTPNLPEVRERENWPKRKRH*RRRSVE
Trigger: CTCCACTGAGCGCCTGCGCAAGTGCCTCTTCCTCTT...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGAACAGAAATACGAAATaGATCAGGAGCACGAGAATG +
Preference number: 5 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLNRNTK*IRSTRM
Trigger: CATTCTCGTGCTCCTGATCAATTTCGTATTTCTGTT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GAGAGAACTGGCCCGAGGCCAGGGCCCGAGCCCACTAAGGAAGATGGATGTGGCAACAGAAATACGAAATaGATCAGGAGCACGAGAATG +
Preference number: 5 (lower is better)
Translates to: ERTGPRPGPEPTKEDGCGNRNTK*IRSTRM
Trigger: CATTCTCGTGCTCCTGATCAATTTCGTATTTCTGTT...GCCACATCCATCTTCCTTAGTGGGCTCGGGCCCTGGCCTCGGGCCAGTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCTCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGAGGATCCTGACGATGTaGAACAGAAATACGAAATTG +
Preference number: 5 (lower is better)
Translates to: PLLPLALSLVAPTHPCPLRILTM*NRNTKL
Trigger: CAATTTCGTATTTCTGTTCAACATCGTCAGGATCCT...CAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACGCACGATGCAACTGGTaGACTAAGGATGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GISLVGVIRDRPACRCFDARCNW*TKDVAS
Trigger: GGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CAAGAGAGGAAGCCAGGCCTGGAAGCCTGCATCCTTCATGGAGCCCCCAAGGCGGGGGTACCTAGAGCATaGGTTTCTTTTGGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QERKPGLEACILHGAPKAGVPRA*VSFGRN
Trigger: ATTTCTTCCAAAAGAAACCAATGCTCTAGGTACCCC...CGCCTTGGGGGCTCCATGAAGGATGCAGGCTTCCAGGCCTGGCTTCCTCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACAGCGCACCTGATTGCTaGGCACACATCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GISLVGVIRDRPACRCFDSAPDC*AHISFW
Trigger: CCAGAAAGAGATGTGTGCCAAGCAATCAGGTGCGCT...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS GCA 90 bp AGTCACACCTGTAGCCACGGCAACCAGAGAATGTTTACCACCTTCTaGCAGTTTCCCTGGAGTTGGAAAGCTGAGGGGTCATCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: SHTCSHGNQRMFTTF*QFPWSWKAEGSSPS
Trigger: AGAAGGGGATGACCCCTCAGCTTTCCAACTCCAGGGAAACTGGCAGAAGGTGGTAAACATTCTCTGGTTGCCGTGGCTACAGGTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS CCA 90 bp GGCAACCAGAGAATGTTTACCACCTTCTGCCAGTTTCCCTGGAGTTaGAAAGCTGAGGGGTCATCCCCTTCTTGGACTCCTGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: GNQRMFTTFCQFPWS*KAEGSSPSWTPECQ
Trigger: CTGGCATTCAGGAGTCCAAGAAGGGGATGACCCCTCAGCTTTCCAACTCCAGGGAAACTGGCAGAAGGTGGTAAACATTCTCTGGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS CCA 90 bp AGCCACGGCAACCAGAGAATGTTTACCACCTTCTGCCAGTTTCCCTaGAGTTGGAAAGCTGAGGGGTCATCCCCTTCTTGGACTCCTGAA +
Preference number: 5 (lower is better)
Translates to: SHGNQRMFTTFCQFP*SWKAEGSSPSWTPE
Trigger: TTCAGGAGTCCAAGAAGGGGATGACCCCTCAGCTTTCCAACTCCAGGGAAACTGGCAGAAGGTGGTAAACATTCTCTGGTTGCCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS-3UTR CAA 90 bp TGTACTGGATTGTCTCGGATGTGGTGGACGCGCGTAACTTTGTCATTAGGATCCAGGTCGCCAGGCTCCTaGCCAAACCAGCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: CTGLSRMWWTRVTLSLGSRSPGS*PNQHCS
Trigger: TGAACAGTGCTGGTTTGGCAAGGAGCCTGGCGACCT...GGATCCTAATGACAAAGTTACGCGCGTCCACCACATCCGAGACAATCCAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp TCTGCTTCCTCTTGCGCTGAGCCTGGTGGCCCCCACTCATCCCTGTCCCTTGCAAACAGAAATACGAAATaGATCAGGAGCACGAGAATG +
Preference number: 5 (lower is better)
Translates to: SASSCAEPGGPHSSLSLANRNTK*IRSTRM
Trigger: CATTCTCGTGCTCCTGATCAATTTCGTATTTCTGTT...TGCAAGGGACAGGGATGAGTGGGGGCCACCAGGCTCAGCGCAAGAGGAAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000452278.5
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp AGGGACGGAAGCCAAGCCTGGAAGCTGCCCTGGTGGTCAACTGAGGGGCCATGTAGGATCCTGACGATGTaGAACAGAAATACGAAATTG +
Preference number: 5 (lower is better)
Translates to: RDGSQAWKLPWWSTEGPCRILTM*NRNTKL
Trigger: CAATTTCGTATTTCTGTTCAACATCGTCAGGATCCT...ACATGGCCCCTCAGTTGACCACCAGGGCAGCTTCCAGGCTTGGCTTCCGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp ACAGACCCGCCTGCAGGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCCCGCCTGCAGGTGCTTaGACCATAAAGACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: TDPPAGALTIKTPNLPEVPPAGA*TIKTPN
Trigger: GTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGG...GACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGGGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS TCA 90 bp ACCCATAATCTCAGCACTTGGGGAAGCCAAGGTAGGCAGATTGCTTaGGCACAGGAATTCAAGACCAGCCAGGAAGTCACACCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: THNLSTWGSQGRQIA*AQEFKTSQEVTPVA
Trigger: GGCTACAGGTGTGACTTCCTGGCTGGTCTTGAATTCCTGTGCTCAAGCAATCTGCCTACCTTGGCTTCCCCAAGTGCTGAGATTATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS-3UTR CAA 90 bp GGTATTAGCCTGGTTGGAGTGATAAGGGACAGACCCGCCTGCAGGTGCTTTGACTCATACTTCCTCTGCTaGTCATCCAAAATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: GISLVGVIRDRPACRCFDSYFLC*SSKMGS
Trigger: TGAGCCCATTTTGGATGACAAGCAGAGGAAGTATGA...GTCAAAGCACCTGCAGGCGGGTCTGTCCCTTATCACTCCAACCAGGCTAATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TCTCTAGGTGACAGCCCCTGGGATAAGGCAGCCAAACTGATCCTTTGCTGGCGTTCATACTTCCTCTGCTaGTCATCCAAAATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SLGDSPWDKAAKLILCWRSYFLC*SSKMGS
Trigger: TGAGCCCATTTTGGATGACAAGCAGAGGAAGTATGA...ACGCCAGCAAAGGATCAGTTTGGCTGCCTTATCCCAGGGGCTGTCACCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCAAGAGGAAGAGGCACTaGCGCAGGCGCTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRKRKRH*RRRSVE
Trigger: CTCCACTGAGCGCCTGCGCAAGTGCCTCTTCCTCTT...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACAGCCAAACTGATCCTTaGCTGGCGTACCCCACCCAA +
Preference number: 5 (lower is better)
Translates to: GALTIKTPNLPEVRERENSQTDP*LAYPTQ
Trigger: TTGGGTGGGGTACGCCAGCAAAGGATCAGTTTGGCT...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCCCAGATTCCAGAGCCTaGGCCTTTGGGACAGGCCCT +
Preference number: 5 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRPDSRA*AFGTGP
Trigger: AGGGCCTGTCCCAAAGGCCAAGGCTCTGGAATCTGG...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACCCGCCTGCAGGTGCTTaGACCATAAAGACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: GALTIKTPNLPEVRERENPPAGA*TIKTPN
Trigger: GTTTGGAGTCTTTATGGTCAAAGCACCTGCAGGCGG...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCCGGGTCGTGTTGTACTaGACGCCGTTGAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRRVVLY*TPLKYS
Trigger: CGAGTACTTCAACGGCGTCAAGTACAACACGACCCG...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGGCAGGGGAGCCCTGTGTCTGCTACTATAAATAGCTGTGTGTGTTGGACAGGTAGGATCCTGACGATGTaGAACAGAAATACGAAATTG +
Preference number: 5 (lower is better)
Translates to: GQGSPVSATINSCVCWTGRILTM*NRNTKL
Trigger: CAATTTCGTATTTCTGTTCAACATCGTCAGGATCCT...ACCTGTCCAACACACACAGCTATTTATAGTAGCAGACACAGGGCTCCCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTATCCCTTCCTGTACTGGATaGTCTCGGATGTGGTGGACG +
Preference number: 5 (lower is better)
Translates to: DQPWHMCVCCIEELFQGIPSCTG*SRMWWT
Trigger: CGTCCACCACATCCGAGACAATCCAGTACAGGAAGG...GATACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp TATGAGTTTCAATCACTGAAGACATGGTTGGTTTCTGCTATTCCCATCCCACGCGCACGATGCAACTGGTaGACTAAGGATGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: YEFQSLKTWLVSAIPIPRARCNW*TKDVAS
Trigger: GGAAGCCACATCCTTAGTCAACCAGTTGCATCGTGC...GCGTGGGATGGGAATAGCAGAAACCAACCATGTCTTCAGTGATTGAAACTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp TTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTGGCCCTCACTGAAGACATGGTaGGTTTCTGCTATTCCCATC +
Preference number: 5 (lower is better)
Translates to: LTIKTPNLPEVRERENWPSLKTW*VSAIPI
Trigger: GATGGGAATAGCAGAAACCAACCATGTCTTCAGTGA...GGGCCAGTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACTCATACTTCCTCTGCTaGTCATCCAAAATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: GALTIKTPNLPEVRERENSYFLC*SSKMGS
Trigger: TGAGCCCATTTTGGATGACAAGCAGAGGAAGTATGA...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCATTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGTAGGAGTAGGGACCTaGGCAGAAGAGCTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: PFDQPWHMCVCCIEELFQVGVGT*AEELRK
Trigger: TTTCCTCAGCTCTTCTGCCAAGGTCCCTACTCCTAC...TTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS-3UTR CAA 90 bp GGTGCTTTGACCATAAAGACTCCAAACCTACCAGAGGTCAGAGAGAGAGAGAACGGGGTACCTAGAGCATaGGTTTCTTTTGGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: GALTIKTPNLPEVRERENGVPRA*VSFGRN
Trigger: ATTTCTTCCAAAAGAAACCAATGCTCTAGGTACCCC...GTTCTCTCTCTCTCTGACCTCTGGTAGGTTTGGAGTCTTTATGGTCAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000471646.6
ENST00000506074.6
CDS-3UTR CAA 90 bp CCATTTGACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAAGGCTCTCTTCCCATTaGACCAACCCTGGCATATGT +
Preference number: 5 (lower is better)
Translates to: PFDQPWHMCVCCIEELFQRLSSH*TNPGIC
Trigger: ACATATGCCAGGGTTGGTCAAATGGGAAGAGAGCCT...TTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTCAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423776.1
ENST00000452278.5
CDS-3UTR CAA 90 bp GACCAACCCTGGCATATGTGTGTGTGTTGCATTGAGGAATTATTTCAAGGTATCAGGATCCTGACGATGTaGAACAGAAATACGAAATTG +
Preference number: 5 (lower is better)
Translates to: DQPWHMCVCCIEELFQGIRILTM*NRNTKL
Trigger: CAATTTCGTATTTCTGTTCAACATCGTCAGGATCCT...GATACCTTGAAATAATTCCTCAATGCAACACACACACATATGCCAGGGTTGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452278.5
CDS GCA 72 bp CGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGGGAGTaGGCGCCCGGCGTGACTGCGAGGGAGTGGACGCGA +
Preference number: 6 (lower is better)
Translates to: RVPQPRAEREWE*APGVTAREWTR
Trigger: TCGCGTCCACTCCCTCGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS TCA 72 bp CGCGTGCGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTaGCTGCGAGGGAGTGGACGCGAGAGTGAGCGGCCG +
Preference number: 6 (lower is better)
Translates to: RVRRGSGSARPA*LRGSGRESERP
Trigger: CGGCCGCTCACTCTCGCGTCCACTCCCTCGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS CCA 72 bp GTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTaGGAGTGCGCGCCCGGCGTGACTGCGAGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: VHRVPQPRAERE*ECAPGVTAREW
Trigger: CCACTCCCTCGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS GCA 72 bp CGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTGGGAGTaGGCGCCCGGCGTGACTGAGAGGTTGGTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: RVPQPRAEREWE*APGVTERLVRV
Trigger: GACCCTCACCAACCTCTCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445981.5
CDS GCA 72 bp GTCAAGTGGGGACCTTCCCGGAGAGGAGCCGCCGAGTaGACGGAGCTGCGGGTACAGCCGCTCCGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: VKWGPSRRGAAE*TELRVQPLRRG
Trigger: GCCGCGGCGGAGCGGCTGTACCCGCAGCTCCGTGCACTCGGCGGCTCCTCTCCGGGAAGGTCCCCACTTGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS CCA 72 bp CCCCGCCAGCCCAGCCCCGATCTCCCGGGCAGCCTTTaGGCGCCACCTCCGGTCGCCCAGAGCTGTCAAGTG +
Preference number: 6 (lower is better)
Translates to: PRQPSPDLPGSL*APPPVAQSCQV
Trigger: CACTTGACAGCTCTGGGCGACCGGAGGTGGCGCCCAAAGGCTGCCCGGGAGATCGGGGCTGGGCTGGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506074.6
CDS CAA 72 bp CCCCCGCCAGCCCAGCCCCGATCTCCCGGGCAGCCTTaGGGCGCCACCTCCGGTCGCCCAGAGCTGTCAAGT +
Preference number: 6 (lower is better)
Translates to: PPPAQPRSPGQP*GATSGRPELSS
Trigger: ACTTGACAGCTCTGGGCGACCGGAGGTGGCGCCCAAAGGCTGCCCGGGAGATCGGGGCTGGGCTGGCGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS GCA 72 bp TGCGGAGAGGGAGTGGGAGTGCGCGCCCGGCGTGACTaGGAGGGAGTGGACGCGAGAGTGAGCGGCCGAGAG +
Preference number: 6 (lower is better)
Translates to: CGEGVGVRARRD*EGVDARVSGRE
Trigger: CTCTCGGCCGCTCACTCTCGCGTCCACTCCCTCGCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471646.6
ENST00000506074.6
CDS CCA 72 bp GTCCATCGCGTCCCGCAGCCGCGTGCGGAGAGGGAGTaGGAGTGCGCGCCCGGCGTGACTGAGAGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: VHRVPQPRAERE*ECAPGVTERLV
Trigger: CACCAACCTCTCAGTCACGCCGGGCGCGCACTCCCACTCCCTCTCCGCACGCGGCTGCGGGACGCGATGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445981.5
CDS GCA 72 bp GCCAGTAGTGGCTGGGGGTTAGGGACTGGAGCCTGCTaGCCAGCACGGTGGTCACACCCTGGCCAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: ASSGWGLGTGAC*PARWSHPGQPH
Trigger: GTGGGGCTGGCCAGGGTGTGACCACCGTGCTGGGCAGCAGGCTCCAGTCCCTAACCCCCAGCCACTACTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS CCA 72 bp TCCAGAAGTGCCCACAGGGGCTGGTCTTTGGGCATCTaGCTCTGCCCGGCTGCGTATTGGAGCGGCGGTGGG +
Preference number: 6 (lower is better)
Translates to: SRSAHRGWSLGI*LCPAAYWSGGG
Trigger: CCCACCGCCGCTCCAATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000423776.1
ENST00000445981.5
ENST00000452278.5
ENST00000462882.1
CDS CAA 90 bp ATGGTGTGGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTGGTCTTaGGGCATCTGGCTCTGCCCGGCTGCGTATTGGAGCGGCGGTGGG +
Preference number: 6 (lower is better)
Translates to: MVWQYCSRSAHRGWS*GIWLCPAAYWSGGG
Trigger: CCCACCGCCGCTCCAATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000423776.1
ENST00000445981.5
ENST00000452278.5
ENST00000462882.1
CDS CCA 72 bp AGTACTGCTCCAGAAGTGCCCACAGGGGCTGGTCTTTaGGCATCTGGCTCTGCCCGGCTGCGTATTGGAGCG +
Preference number: 6 (lower is better)
Translates to: STAPEVPTGAGL*ASGSARLRIGA
Trigger: CGCTCCAATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000423776.1
ENST00000445981.5
ENST00000452278.5
ENST00000462882.1
CDS CCA 72 bp GTGTGGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTaGTCTTTGGGCATCTGGCTCTGCCCGGCTGCGTAT +
Preference number: 6 (lower is better)
Translates to: VWQYCSRSAHRG*SLGIWLCPAAY
Trigger: ATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000423776.1
ENST00000445981.5
ENST00000452278.5
ENST00000462882.1
CDS CAA 72 bp CAGTACTGCTCCAGAAGTGCCCACAGGGGCTGGTCTTaGGGCATCTGGCTCTGCCCGGCTGCGTATTGGAGC +
Preference number: 6 (lower is better)
Translates to: QYCSRSAHRGWS*GIWLCPAAYWS
Trigger: GCTCCAATACGCAGCCGGGCAGAGCCAGATGCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000423776.1
ENST00000445981.5
ENST00000452278.5
ENST00000462882.1
CDS CCA 72 bp GACCAGCCTGAGAGGTTGGTGAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: DQPERLVRVMMV*QYCSRSAHRGW
Trigger: CCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000423776.1
ENST00000452278.5
CDS CCA 72 bp GGCGTGACTGAGAGGTTGGTGAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GVTERLVRVMMV*QYCSRSAHRGW
Trigger: CCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGTCACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445981.5
CDS CCA 72 bp CCTGAGCCTGAGAGGTTGGTGAGGGTCATGATGGTGTaGCAGTACTGCTCCAGAAGTGCCCACAGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PEPERLVRVMMV*QYCSRSAHRGW
Trigger: CCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS CCA 72 bp GCCAGCCCAGCTGACTTCCATCGTGGGAGCTGGGAATaGGGAGTGGCCTCCCAGCCAAGCCCTTCATTATCA +
Preference number: 6 (lower is better)
Translates to: ASPADFHRGSWE*GVASQPSPSLS
Trigger: TGATAATGAAGGGCTTGGCTGGGAGGCCACTCCCCATTCCCAGCTCCCACGATGGAAGTCAGCTGGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS GCA 72 bp GAGAGGTTGGTGAGGGTCATGATGGTGTGGCAGTACTaGTCCAGAAGTGCCCACAGGGGCTGGTCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: ERLVRVMMVWQY*SRSAHRGWSLG
Trigger: GCCCAAAGACCAGCCCCTGTGGGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341843.8
ENST00000348438.8
ENST00000423776.1
ENST00000445981.5
ENST00000452278.5
ENST00000462882.1
CDS CAA 90 bp CCAGCCAAGCCCTTCATTATCAGTGGCAAGCCTGAGCCTGAGAGGTaGGTGAGGGTCATGATGGTGTGGCAGTACTGCTCCAGAAGTGCC +
Preference number: 6 (lower is better)
Translates to: PAKPFIISGKPEPER*VRVMMVWQYCSRSA
Trigger: GGCACTTCTGGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTCAGGCTTGCCACTGATAATGAAGGGCTTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS CAA 72 bp CCCTTCATTATCAGTGGCAAGCCTGAGCCTGAGAGGTaGGTGAGGGTCATGATGGTGTGGCAGTACTGCTCC +
Preference number: 6 (lower is better)
Translates to: PFIISGKPEPER*VRVMMVWQYCS
Trigger: GGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTCAGGCTTGCCACTGATAATGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS TCA 72 bp CTCAGCACTTGGGGAAGCCAAGGTAGGCAGATTGCTTaGGCACAGGAATTCAAGACCAGCCTGAGAGGTTGG +
Preference number: 6 (lower is better)
Translates to: LSTWGSQGRQIA*AQEFKTSLRGW
Trigger: CCAACCTCTCAGGCTGGTCTTGAATTCCTGTGCTCAAGCAATCTGCCTACCTTGGCTTCCCCAAGTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000423776.1
ENST00000452278.5
CDS CAA 72 bp TGCTTGAGCACAGGAATTCAAGACCAGCCTGAGAGGTaGGTGAGGGTCATGATGGTGTGGCAGTACTGCTCC +
Preference number: 6 (lower is better)
Translates to: CLSTGIQDQPER*VRVMMVWQYCS
Trigger: GGAGCAGTACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTGGTCTTGAATTCCTGTGCTCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000423776.1
ENST00000452278.5
CDS TCA 72 bp GGCAGATTGCTTGAGCACAGGAATTCAAGACCAGCCTaGGAGGTTGGTGAGGGTCATGATGGTGTGGCAGTA +
Preference number: 6 (lower is better)
Translates to: GRLLEHRNSRPA*EVGEGHDGVAV
Trigger: TACTGCCACACCATCATGACCCTCACCAACCTCTCAGGCTGGTCTTGAATTCCTGTGCTCAAGCAATCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341843.8
ENST00000423776.1
ENST00000452278.5
CDS TCA 72 bp CTCAGCACTTGGGGAAGCCAAGGTAGGCAGATTGCTTaGGCACAGGAATTCAAGACCAGCCAGGAAGTCACA +
Preference number: 6 (lower is better)
Translates to: LSTWGSQGRQIA*AQEFKTSQEVT
Trigger: TGTGACTTCCTGGCTGGTCTTGAATTCCTGTGCTCAAGCAATCTGCCTACCTTGGCTTCCCCAAGTGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462882.1
CDS GCA 72 bp TGTAGCCACGGCAACCAGAGAATGTTTACCACCTTCTaGCAGTTTCCCTGGAGTTGGAAAGCTGAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: CSHGNQRMFTTF*QFPWSWKAEGS
Trigger: TGACCCCTCAGCTTTCCAACTCCAGGGAAACTGGCAGAAGGTGGTAAACATTCTCTGGTTGCCGTGGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462882.1