Pregenerated sensors for CRH (Homo sapiens)
Ensembl gene IDs: ENSG00000147571Ensembl transcript IDs: ENST00000276571.5
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATTCTCTTTaGCTCAGACCACAACAAAAACAATTGAGTGACTTCTGTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: AYRFSLTHPREWHSL*LRPQQKQLSDFCLL Trigger: AAGCAGACAGAAGTCACTCAATTGTTTTTGTTGTGGTCTGAGCCAAAGAGAATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| 3UTR-3UTR GCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGCGTGAATACACTTTGTaGATGCTAAGTAAGGGGTAT | + |
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Preference number: 2 (lower is better) Translates to: INTWKRKLNVDKTNNIVLREYTL*MLSKGY Trigger: ATACCCCTTACTTAGCATGCACAAAGTGTATTCACG...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| 3UTR-3UTR TCA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCACAACAAAAACAATTaGGTGACTTCTGTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHHNKNN*VTSVCF Trigger: AAAGCAGACAGAAGTCACTCAATTGTTTTTGTTGTG...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| 3UTR-3UTR CCA 90 bp | ACTATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGATAAGAGCAGCGCTATaGTACAGAATACTGTATTTT | + |
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Preference number: 2 (lower is better) Translates to: TINTWKRKLNVDKTNNIVIRAAL*YRILYF Trigger: AAAATACAGTATTCTGTACCATAGCGCTGCTCTTAT...CACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTATAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| 3UTR-3UTR CAA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATGCACGTGAATACACTTaGTGCATGCTAAGTAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: KLFQRAYRFSLTHPREWHAREYT*CMLSKG Trigger: CCCCTTACTTAGCATGCACAAAGTGTATTCACGTGC...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| 3UTR-3UTR CAA 90 bp | AGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATTACGAATAACATTGTGTaGCTGCTGCACGTGAATACA | + |
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Preference number: 3 (lower is better) Translates to: SCFKELTDLVLPTQENGITNNIV*LLHVNT Trigger: TGTATTCACGTGCAGCAGCAACACAATGTTATTCGT...AATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| 3UTR-3UTR CAA 90 bp | AGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATTCCACAACAAAAACAATaGAGTGACTTCTGTCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: SCFKELTDLVLPTQENGIPQQKQ*SDFCLL Trigger: AAGCAGACAGAAGTCACTCAATTGTTTTTGTTGTGG...AATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR GCA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATAAGGGCGGCTGCCGCTaGCTCCGGCGAGGAGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: KLFQRAYRFSLTHPREWHKGGCR*LRRGAR Trigger: CCTCGCTCCTCGCCGGAGGCAGCGGCAGCCGCCCTT...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR GCA 90 bp | ACTATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGAGGACCGGCCGAGCCTaGGGCTGCTGGGGCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: TINTWKRKLNVDKTNNIVRTGRA*GCWGCS Trigger: CGAGCAGCCCCAGCAGCCGCAGGCTCGGCCGGTCCT...CACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATCTCTCCGGTGCCTCCTaGTGGCCGCCGAGGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: KLFQRAYRFSLTHPREWHLSGAS*WPPRAF Trigger: GAATGCCCTCGGCGGCCACCAGGAGGCACCGGAGAG...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR GCA 90 bp | ACTATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGGGCTCAGGAGCGCCCTaGATGGCGGGCAGGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TINTWKRKLNVDKTNNIVGSGAP*MAGRAG Trigger: TCCTGCCCTGCCCGCCATGCAGGGCGCTCCTGAGCC...CACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR TCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGCGGCCGGGCTCTTGTTaGGGTTCCCCAGGCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: INTWKRKLNVDKTNNIVLRPGSC*GSPGGG Trigger: TCCTCCGCCTGGGGAACCTCAACAAGAGCCCGGCCG...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR GCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGGTGCTGCCGCCTCTCTaGAGAGAGACGTCTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: INTWKRKLNVDKTNNIVLVLPPL*RETSPG Trigger: CCCCGGAGACGTCTCTCTGCAGAGAGGCGGCAGCAC...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGTCCGGTGCCTCCTGGTaGCCGCCGAGGGCATTCCTA | + |
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Preference number: 4 (lower is better) Translates to: INTWKRKLNVDKTNNIVLSGASW*PPRAFL Trigger: TAGGAATGCCCTCGGCGGCCACCAGGAGGCACCGGA...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR TCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGAAGAAATCCAAGGGCTaGGGGTGCTGCGGCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: INTWKRKLNVDKTNNIVLKKSKG*GCCGAC Trigger: GCAGGCGCCGCAGCACCCTCAGCCCTTGGATTTCTT...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR GCA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACAGTACTCCTCTCCCATaGGGAGCAGGACCGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHSTPLP*GAGPAE Trigger: CTCGGCCGGTCCTGCTCCGCATGGGAGAGGAGTACT...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR GCA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATGCTTGCTGTGCTAACTaGTCGGCCCTGGCCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: KLFQRAYRFSLTHPREWHACCAN*SALAIS Trigger: GGAAATGGCCAGGGCCGAGCAGTTAGCACAGCAAGC...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR GCA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCGAGGCAGCAGCAGCTaGTGCAGCAACACGCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHRGSSS*CSNTRK Trigger: TTTCCGCGTGTTGCTGCAGCAGCTGCTGCTGCCTCG...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACACACGCGGAAAAAGTTaGCGGTCGCCTGTTCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHTRGKS*RSPVPA Trigger: CGCCGGAACAGGCGACCGCCAACTTTTTCCGCGTGT...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATCTAACTGCTCGGCCCTaGCCATTTCCAAGACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KLFQRAYRFSLTHPREWHLTARP*PFPRLP Trigger: GGGAAGTCTTGGAAATGGCCAGGGCCGAGCAGTTAG...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR GCA 90 bp | ACTATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGGGCAGCAGCAGCTGCTaGAGCAACACGCGGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: TINTWKRKLNVDKTNNIVGSSSC*SNTRKK Trigger: CTTTTTCCGCGTGTTGCTGCAGCAGCTGCTGCTGCC...CACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACACTTCCCGGAGGAGGTaGAAGGTGAGATCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHTSRRR*KVRSRE Trigger: CTCCCTGGATCTCACCTTCCACCTCCTCCGGGAAGT...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACTCCGGGGGCTTTCTCTaGAGGTTGTCTTCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHSGGFL*RLSSFL Trigger: GAGAAAGGAAGACAACCTCCAGAGAAAGCCCCCGGA...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR TCA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACAGTTTCCTGTTGCTGTaGGCTTGCTGTGCTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHSFLLL*ACCANC Trigger: GCAGTTAGCACAGCAAGCTCACAGCAACAGGAAACT...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR TCA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATCTTACACAACCAAACTaGCCAAGGACTGGAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: KLFQRAYRFSLTHPREWHLTQPN*PRTGKM Trigger: CATCTTTCCAGTCCTTGGTCAGTTTGGTTGTGTAAG...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGCCCTCAGTCTCTCAATaGACTTGGTCTCTGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: INTWKRKLNVDKTNNIVLPSVSQ*TWSLSF Trigger: GAAACTCAGAGACCAAGTCCATTGAGAGACTGAGGG...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGACCCACCCAAGAGAATaGCATTCTCTTTGGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: INTWKRKLNVDKTNNIVLTHPRE*HSLWLR Trigger: TCTGAGCCAAAGAGAATGCCATTCTCTTGGGTGGGT...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR GCA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATCGTGAATACACTTTGTaGATGCTAAGTAAGGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: KLFQRAYRFSLTHPREWHREYTL*MLSKGY Trigger: ATACCCCTTACTTAGCATGCACAAAGTGTATTCACG...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR TCA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATCACAACAAAAACAATTaGGTGACTTCTGTCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KLFQRAYRFSLTHPREWHHNKNN*VTSVCF Trigger: AAAGCAGACAGAAGTCACTCAATTGTTTTTGTTGTG...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGGAATGGCATTCTCTTTaGCTCAGACCACAACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: INTWKRKLNVDKTNNIVLEWHSL*LRPQQK Trigger: TTTTTGTTGTGGTCTGAGCCAAAGAGAATGCCATTC...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGAATGCAGATTCTTTTTaGCCAAACGCACCGTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: INTWKRKLNVDKTNNIVLNADSF*PNAPFY Trigger: ATAAAACGGTGCGTTTGGCCAAAAAGAATCTGCATT...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | ATAAACACCTGGAAACGGAAACTAAACGTAGACAAAACGAATAACATTGTGTTGACCACTATAAACACCTaGAAACGGAAACTAAACGTA | + |
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Preference number: 4 (lower is better) Translates to: INTWKRKLNVDKTNNIVLTTINT*KRKLNV Trigger: TACGTTTAGTTTCCGTTTCCAGGTGTTTATAGTGGT...CAACACAATGTTATTCGTTTTGTCTACGTTTAGTTTCCGTTTCCAGGTGTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CCA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACATAAGAGCAGCGCTATaGTACAGAATACTGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHIRAAL*YRILYF Trigger: AAAATACAGTATTCTGTACCATAGCGCTGCTCTTAT...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 90 bp | GCGCCTGCCGAGCTCCCGGGACCGGCCCGCGGCTCAGGAGCGCCCTaGATGGCGGGCAGGGCAGGAGAGCCACCAGCAGGACTCCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: APAELPGPARGSGAP*MAGRAGEPPAGLPR Trigger: CCGCGGGAGTCCTGCTGGTGGCTCTCCTGCCCTGCCCGCCATGCAGGGCGCTCCTGAGCCGCGGGCCGGTCCCGGGAGCTCGGCAGGCGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS CCA 90 bp | ATGGGAGGCTCCTCGGACCGCCTTTCTCTCTCCGGTGCCTCCTGGTaGCCGCCGAGGGCATTCCTAGCGCCGCGCTCCGCGAGAGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: MGGSSDRLSLSGASW*PPRAFLAPRSARAA Trigger: CGCGGCTCTCGCGGAGCGCGGCGCTAGGAATGCCCTCGGCGGCCACCAGGAGGCACCGGAGAGAGAAAGGCGGTCCGAGGAGCCTCCCAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS CCA 90 bp | GAGATGGGAGGCTCCTCGGACCGCCTTTCTCTCTCCGGTGCCTCCTaGTGGCCGCCGAGGGCATTCCTAGCGCCGCGCTCCGCGAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: EMGGSSDRLSLSGAS*WPPRAFLAPRSARA Trigger: GGCTCTCGCGGAGCGCGGCGCTAGGAATGCCCTCGGCGGCCACCAGGAGGCACCGGAGAGAGAAAGGCGGTCCGAGGAGCCTCCCATCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 90 bp | CGGAGGAAGTACTCCTCTCCCATGCGGAGCAGGACCGGCCGAGCCTaGGGCTGCTGGGGCTGCTCGGACTGCGGCGGCGGCTGGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: RRKYSSPMRSRTGRA*GCWGCSDCGGGWKK Trigger: TTTCTTCCAGCCGCCGCCGCAGTCCGAGCAGCCCCAGCAGCCGCAGGCTCGGCCGGTCCTGCTCCGCATGGGAGAGGAGTACTTCCTCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 90 bp | GCGAGAGCCGCGGGGCTGTCGAGCGAGCGCCGAGGCAGCAGCAGCTaGTGCAGCAACACGCGGAAAAAGTTGGCGGTCGCCTGTTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: ARAAGLSSERRGSSS*CSNTRKKLAVACSG Trigger: GCCGGAACAGGCGACCGCCAACTTTTTCCGCGTGTTGCTGCAGCAGCTGCTGCTGCCTCGGCGCTCGCTCGACAGCCCCGCGGCTCTCGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 90 bp | ATCCAGGGAGATGGGAGGCTCCTCGGACCGCCTTTCTCTCTCCGGTaGCTCCTGGTGGCCGCCGAGGGCATTCCTAGCGCCGCGCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: IQGDGRLLGPPFSLR*LLVAAEGIPSAALR Trigger: GCGGAGCGCGGCGCTAGGAATGCCCTCGGCGGCCACCAGGAGGCACCGGAGAGAGAAAGGCGGTCCGAGGAGCCTCCCATCTCCCTGGAT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS CCA 90 bp | TACTCCTCTCCCATGCGGAGCAGGACCGGCCGAGCCTGCGGCTGCTaGGGCTGCTCGGACTGCGGCGGCGGCTGGAAGAAATCCAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: YSSPMRSRTGRACGC*GCSDCGGGWKKSKG Trigger: GCCCTTGGATTTCTTCCAGCCGCCGCCGCAGTCCGAGCAGCCCCAGCAGCCGCAGGCTCGGCCGGTCCTGCTCCGCATGGGAGAGGAGTA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS TCA 90 bp | CGAGGAGCGAGGAGGCGGGCGAAAGGGGAGCGGCCGGGCTCTTGTTaGGGTTCCCCAGGCGGAGGAAGTACTCCTCTCCCATGCGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: RGARRRAKGERPGSC*GSPGGGSTPLPCGA Trigger: TGCTCCGCATGGGAGAGGAGTACTTCCTCCGCCTGGGGAACCTCAACAAGAGCCCGGCCGCTCCCCTTTCGCCCGCCTCCTCGCTCCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 90 bp | AAGTACTCCTCTCCCATGCGGAGCAGGACCGGCCGAGCCTGCGGCTaGTGGGGCTGCTCGGACTGCGGCGGCGGCTGGAAGAAATCCAAG | + |
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Preference number: 5 (lower is better) Translates to: KYSSPMRSRTGRACG*WGCSDCGGGWKKSK Trigger: CTTGGATTTCTTCCAGCCGCCGCCGCAGTCCGAGCAGCCCCAGCAGCCGCAGGCTCGGCCGGTCCTGCTCCGCATGGGAGAGGAGTACTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 90 bp | AGAGCCGCGGGGCTGTCGAGCGAGCGCCGAGGCAGCAGCAGCTGCTaGAGCAACACGCGGAAAAAGTTGGCGGTCGCCTGTTCCGGCGAA | + |
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Preference number: 5 (lower is better) Translates to: RAAGLSSERRGSSSC*SNTRKKLAVACSGE Trigger: TTCGCCGGAACAGGCGACCGCCAACTTTTTCCGCGTGTTGCTGCAGCAGCTGCTGCTGCCTCGGCGCTCGCTCGACAGCCCCGCGGCTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 90 bp | CGCTTCCCAGGCGCTTCGCAGGTGAGCCGGGTGCTGCCGCCTCTCTaGAGAGAGACGTCTCCGGGGGCTTTCTCTGGAGGTTGTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: RFPGASQVSRVLPPL*RETSPGAFSGGCLP Trigger: AGGAAGACAACCTCCAGAGAAAGCCCCCGGAGACGTCTCTCTGCAGAGAGGCGGCAGCACCCGGCTCACCTGCGAAGCGCCTGGGAAGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CAA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATGGAGCGGCCGGGCTCTaGTTGAGGTTCCCCAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: KLFQRAYRFSLTHPREWHGAAGL*LRFPRR Trigger: CCGCCTGGGGAACCTCAACAAGAGCCCGGCCGCTCC...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CAA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACGCGGCCGGGCTCTTGTaGAGGTTCCCCAGGCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHAAGLL*RFPRRR Trigger: CCTCCGCCTGGGGAACCTCAACAAGAGCCCGGCCGC...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CAA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATAACACGCGGAAAAAGTaGGCGGTCGCCTGTTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: KLFQRAYRFSLTHPREWHNTRKK*AVACSG Trigger: GCCGGAACAGGCGACCGCCAACTTTTTCCGCGTGTT...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CAA 90 bp | AAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATGGCTTTCTCTGGAGGTaGTCTTCCTTTCTCTTTACT | + |
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Preference number: 5 (lower is better) Translates to: KLFQRAYRFSLTHPREWHGFLWR*SSFLFT Trigger: AGTAAAGAGAAAGGAAGACAACCTCCAGAGAAAGCC...ATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CAA 90 bp | AGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCAAGAGAATGGCATTAAATGCAGATTCTTTTaGGCCAAACGCACCGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: SCFKELTDLVLPTQENGIKCRFF*AKRTVL Trigger: TAAAACGGTGCGTTTGGCCAAAAAGAATCTGCATTT...AATGCCATTCTCTTGGGTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS-3UTR CAA 90 bp | AACGTTTACAAGAGAAAGTTGTTTCAAAGAGCTTACAGATTTAGTCTTACCCACCCACAACAAAAACAATaGAGTGACTTCTGTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: NVYKRKLFQRAYRFSLTHPQQKQ*SDFCLL Trigger: AAGCAGACAGAAGTCACTCAATTGTTTTTGTTGTGG...GTGGGTAAGACTAAATCTGTAAGCTCTTTGAAACAACTTTCTCTTGTAAACGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 72 bp | TCTCCCATGCGGAGCAGGACCGGCCGAGCCTGCGGCTaGTGGGGCTGCTCGGACTGCGGCGGCGGCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SPMRSRTGRACG*WGCSDCGGGWK Trigger: CTTCCAGCCGCCGCCGCAGTCCGAGCAGCCCCAGCAGCCGCAGGCTCGGCCGGTCCTGCTCCGCATGGGAGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS TCA 72 bp | TCGGACTGCGGCGGCGGCTGGAAGAAATCCAAGGGCTaGGGGTGCTGCGGCGCCTGCCGAGCTCCCGGGACC | + |
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Preference number: 6 (lower is better) Translates to: SDCGGGWKKSKG*GCCGACRAPGT Trigger: GGTCCCGGGAGCTCGGCAGGCGCCGCAGCACCCTCAGCCCTTGGATTTCTTCCAGCCGCCGCCGCAGTCCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS CCA 72 bp | TCCTCGGACCGCCTTTCTCTCTCCGGTGCCTCCTGGTaGCCGCCGAGGGCATTCCTAGCGCCGCGCTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: SSDRLSLSGASW*PPRAFLAPRSA Trigger: CGCGGAGCGCGGCGCTAGGAATGCCCTCGGCGGCCACCAGGAGGCACCGGAGAGAGAAAGGCGGTCCGAGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS CCA 72 bp | GGCTCCTCGGACCGCCTTTCTCTCTCCGGTGCCTCCTaGTGGCCGCCGAGGGCATTCCTAGCGCCGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSSDRLSLSGAS*WPPRAFLAPRS Trigger: GGAGCGCGGCGCTAGGAATGCCCTCGGCGGCCACCAGGAGGCACCGGAGAGAGAAAGGCGGTCCGAGGAGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS CAA 90 bp | GCGAGGAGCGAGGAGGCGGGCGAAAGGGGAGCGGCCGGGCTCTTGTaGAGGTTCCCCAGGCGGAGGAAGTACTCCTCTCCCATGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ARSEEAGERGAAGLL*RFPRRRKYSSPMRS Trigger: GCTCCGCATGGGAGAGGAGTACTTCCTCCGCCTGGGGAACCTCAACAAGAGCCCGGCCGCTCCCCTTTCGCCCGCCTCCTCGCTCCTCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 72 bp | GCGGGGCTGTCGAGCGAGCGCCGAGGCAGCAGCAGCTaGTGCAGCAACACGCGGAAAAAGTTGGCGGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: AGLSSERRGSSS*CSNTRKKLAVA Trigger: GGCGACCGCCAACTTTTTCCGCGTGTTGCTGCAGCAGCTGCTGCTGCCTCGGCGCTCGCTCGACAGCCCCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 72 bp | GATGGGAGGCTCCTCGGACCGCCTTTCTCTCTCCGGTaGCTCCTGGTGGCCGCCGAGGGCATTCCTAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: DGRLLGPPFSLR*LLVAAEGIPSA Trigger: GGCGCTAGGAATGCCCTCGGCGGCCACCAGGAGGCACCGGAGAGAGAAAGGCGGTCCGAGGAGCCTCCCATC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS GCA 72 bp | GGCGCTTCGCAGGTGAGCCGGGTGCTGCCGCCTCTCTaGAGAGAGACGTCTCCGGGGGCTTTCTCTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: GASQVSRVLPPL*RETSPGAFSGG Trigger: ACCTCCAGAGAAAGCCCCCGGAGACGTCTCTCTGCAGAGAGGCGGCAGCACCCGGCTCACCTGCGAAGCGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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| CDS CCA 72 bp | TGTTGCTGTGAGCTTGCTGTGCTAACTGCTCGGCCCTaGCCATTTCCAAGACTTCCCGGAGGAGGTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: CCCELAVLTARP*PFPRLPGGGGR Trigger: CCTTCCACCTCCTCCGGGAAGTCTTGGAAATGGCCAGGGCCGAGCAGTTAGCACAGCAAGCTCACAGCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276571.5 |
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