RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CREM (Homo sapiens)

Ensembl gene IDs: ENSG00000095794

Ensembl transcript IDs: ENST00000337656.8, ENST00000342105.7, ENST00000344351.5, ENST00000345491.7, ENST00000348787.6, ENST00000354759.7, ENST00000356917.9, ENST00000361599.8, ENST00000374711.5, ENST00000374721.7, ENST00000374726.7, ENST00000374728.7, ENST00000374734.7, ENST00000395887.7, ENST00000427847.6, ENST00000429130.7, ENST00000439705.5, ENST00000460270.5, ENST00000461968.5, ENST00000463314.5, ENST00000463960.5, ENST00000464475.1, ENST00000466251.5, ENST00000468236.5, ENST00000469517.1, ENST00000469949.6, ENST00000472813.1, ENST00000473940.5, ENST00000474362.5, ENST00000474931.5, ENST00000479070.5, ENST00000482633.5, ENST00000482646.5, ENST00000484283.5, ENST00000487132.5, ENST00000487763.5, ENST00000488328.5, ENST00000488741.5, ENST00000489321.5, ENST00000489388.5, ENST00000490460.5, ENST00000490511.1, ENST00000495301.1, ENST00000495960.5, ENST00000496626.5

Found 832 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATaGAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTAGGAGCTCG +
Preference number: 1 (lower is better)
Translates to: CFFCQLLGTVQTSGR*SHHHSLWQSSSRSS
Trigger: CGAGCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR GCA 90 bp AGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAA +
Preference number: 1 (lower is better)
Translates to: SSRLRVASSASCWGL*KLPGDAAITTPCGK
Trigger: TTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR CCA 90 bp GGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGCTCGGATCTGGTAAGTTGGCATGTC +
Preference number: 1 (lower is better)
Translates to: GTVQTSGRCSHHHSL*QSSSRSSDLVSWHV
Trigger: GACATGCCAACTTACCAGATCCGAGCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR CCA 90 bp ATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACTCCC +
Preference number: 1 (lower is better)
Translates to: ISLSSRLRVASSASC*GLCKLPGDAAITTP
Trigger: GGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR GCA 90 bp TTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACT +
Preference number: 1 (lower is better)
Translates to: FISLSSRLRVASSAS*WGLCKLPGDAAITT
Trigger: AGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR GCA 90 bp ACTCCCGGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTC +
Preference number: 1 (lower is better)
Translates to: TPGQLPCFSLASALV*VLLLLPAAGDCANF
Trigger: GAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCCGGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490460.5
3UTR TCA 90 bp AACAACCTGGCTGCCTGGGACAAAGAACTGCTGTGTGCCATCAGCTaGTTGTGCTGCGTACTGTACAATTGTAGCACCTGGTGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: NNLAAWDKELLCAIS*LCCVLYNCSTWWRS
Trigger: GCTCCTCCACCAGGTGCTACAATTGTACAGTACGCAGCACAATCAGCTGATGGCACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR TCA 90 bp ATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCAT +
Preference number: 1 (lower is better)
Translates to: MVERARARISTQCRN*LVPRRYAMRSQQAH
Trigger: ATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGTGCTGATCCTTGCACGCGCCCTTTCTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR GCA 90 bp ATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTC +
Preference number: 1 (lower is better)
Translates to: ILWQLPCFSLASALV*VLLLLPAAGDCANF
Trigger: GAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
3UTR CCA 90 bp GGCTATAGCAATGTATTGCCCCGTGCTAGTCTGATATATGCTAGTTaGTACTGCCATGGTAGCAATACTAGGTGGTGTTCCTTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: GYSNVLPRASLIYAS*YCHGSNTRWCSFFL
Trigger: GAGGAAGAAGGAACACCACCTAGTATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACATTGCTATAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR CCA 90 bp TCCTGGAACAACATTCCCAATTCAATTTCAAACACTAATCCAAACTaGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGG +
Preference number: 1 (lower is better)
Translates to: SWNNIPNSISNTNPN*ILKGHTCPSHKSTW
Trigger: CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTTTGAAATTGAATTGGGAATGTTGTTCCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR GCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCCTGGGTGCACAGCCCTaGGGCCATCCCCACCGTGAG +
Preference number: 2 (lower is better)
Translates to: PDSSRPPTERKSQAIMKALGAQP*GHPHRE
Trigger: CTCACGGTGGGGATGGCCGCAGGGCTGTGCACCCAG...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATCTGGGTGCACAGCCCTaGGGCCATCCCCACCGTGAG +
Preference number: 2 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYLGAQP*GHPHRE
Trigger: CTCACGGTGGGGATGGCCGCAGGGCTGTGCACCCAG...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCTGGGTGCACAGCCCTaGGGCCATCCCCACCGTGAG +
Preference number: 2 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSLGAQP*GHPHRE
Trigger: CTCACGGTGGGGATGGCCGCAGGGCTGTGCACCCAG...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp GCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 2 (lower is better)
Translates to: ASCWGLCKLPGDAAITTPASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...GGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR TCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCCGGCCATCCCCACCGTaGGATGGTAGAAAGGGCGCG +
Preference number: 2 (lower is better)
Translates to: PDSSRPPTERKSQAIMKARPSPP*DGRKGA
Trigger: CGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCG...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp CTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCAAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 2 (lower is better)
Translates to: LLLPAAGDCANFRAMQPSSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...TGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR TCA 90 bp GACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGTCACCAGTGGCAGCTTaGACAACAACCTGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: DCANFRAMQPSPLPVAKQSPVAA*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGA...CTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR GCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 2 (lower is better)
Translates to: CGHPHREMVERARARISTPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR CAA 90 bp GGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCG +
Preference number: 2 (lower is better)
Translates to: GQLPCFSLASALVCV*LLLPAAGDCANFRA
Trigger: CGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490460.5
3UTR-3UTR TCA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCCGGCCATCCCCACCGTaGGATGGTAGAAAGGGCGCG +
Preference number: 2 (lower is better)
Translates to: PPTERKSQAIMKAETLTARPSPP*DGRKGA
Trigger: CGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCG...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR TCA 90 bp TGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAACTGTGTGCCATCAGCTaGTTGTGCTGCGTACTGTAC +
Preference number: 2 (lower is better)
Translates to: WGLCKLPGDAAITTPCGKLCAIS*LCCVLY
Trigger: GTACAGTACGCAGCACAATCAGCTGATGGCACACAG...TTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR GCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCCCATCTTCTTCTGGGTaGACAGCCCTGCGGCCATCC +
Preference number: 2 (lower is better)
Translates to: PDSSRPPTERKSQAIMKAPSSSG*TALRPS
Trigger: GGATGGCCGCAGGGCTGTGCACCCAGAAGAAGATGG...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCCATCTTCTTCTGGGTaGACAGCCCTGCGGCCATCC +
Preference number: 2 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSPSSSG*TALRPS
Trigger: GGATGGCCGCAGGGCTGTGCACCCAGAAGAAGATGG...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp TCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTAGGAGCTCGCAAAGAACTGCTGTGTaGCATCAGCTGATTGTGCTG +
Preference number: 2 (lower is better)
Translates to: SGRCSHHHSLWQSSSRSSQRTAV*HQLIVL
Trigger: CAGCACAATCAGCTGATGGCACACAGCAGTTCTTTG...CGAGCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR CAA 90 bp TGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCG +
Preference number: 2 (lower is better)
Translates to: WQLPCFSLASALVCV*LLLPAAGDCANFRA
Trigger: CGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
3UTR-3UTR TCA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGGTAATGAACCTCAGCTaGATGTGCCGACAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKVMNLS*MCRQRS
Trigger: ACTCCGCTGTCGGCACATTCAGCTGAGGTTCATTAC...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR CAA 90 bp CACTCCCGGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTT +
Preference number: 2 (lower is better)
Translates to: HSRAASLFFISLSSR*RVASSASCWGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCCGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490460.5
3UTR-3UTR CCA 90 bp GGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTAGGAGCTCGGATTCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 2 (lower is better)
Translates to: GRCSHHHSLWQSSSRSSDSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...ATCCGAGCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR TCA 90 bp TGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTATGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 2 (lower is better)
Translates to: CKLPGDAAITTPCGKAAVCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...TACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR GCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCGGTAGAAAGGGCGCGTaGAAGGATCAGCACCCAGTG +
Preference number: 2 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLGRKGA*KDQHPV
Trigger: CACTGGGTGCTGATCCTTGCACGCGCCCTTTCTACC...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACCCATCTTCTTCTGGGTaGACAGCCCTGCGGCCATCC +
Preference number: 2 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANPSSSG*TALRPS
Trigger: GGATGGCCGCAGGGCTGTGCACCCAGAAGAAGATGG...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CCA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCATCTTCTTCTaGGTGCACAGCCCTGCGGCC +
Preference number: 2 (lower is better)
Translates to: SRPPTERKSQAIMKAETLTAIFF*VHSPAA
Trigger: GGCCGCAGGGCTGTGCACCCAGAAGAAGATGGCTGT...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CCA 90 bp AGGAGCTCGGATCTGGTAAGTTGGCATGTCACCAGTGGCAGCTTGAACAACAACTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 2 (lower is better)
Translates to: RSSDLVSWHVTSGSLNNNSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...GTTGTTGTTCAAGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR GCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCCAAACACTACAAAGTaGAACCAACATGGTTCTATT +
Preference number: 2 (lower is better)
Translates to: CGHPHREMVERARARISTPNTTK*NQHGSI
Trigger: AATAGAACCATGTTGGTTGCACTTTGTAGTGTTTGG...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATCCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 2 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTGGTAGAAAGGGCGCGTaGAAGGATCAGCACCCAGTG +
Preference number: 2 (lower is better)
Translates to: VETDLYPEGMQCDPNRLIGRKGA*KDQHPV
Trigger: CACTGGGTGCTGATCCTTGCACGCGCCCTTTCTACC...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp TCAGCTGAATGTGCCGACAGCGGAGTATCTGATCTAATGTGGACTTTGAAGCATCCATCTTCTTCTGGGTaGACAGCCCTGCGGCCATCC +
Preference number: 2 (lower is better)
Translates to: SAECADSGVSDLMWTLKHPSSSG*TALRPS
Trigger: GGATGGCCGCAGGGCTGTGCACCCAGAAGAAGATGG...ATGCTTCAAAGTCCACATTAGATCAGATACTCCGCTGTCGGCACATTCAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp CTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 2 (lower is better)
Translates to: LWQLPCFSLASALVCVLLSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...AAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
3UTR-3UTR GCA 90 bp GACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGTATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 2 (lower is better)
Translates to: DCANFRAMQPSPLPVAKQYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...CTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CCA 90 bp ACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTAGGAGCCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 2 (lower is better)
Translates to: TSGRCSHHHSLWQSSSRSLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CCA 90 bp GCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCCTGGGTTAGAAATCTaGATTGTTCCACCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: ALVCVLLLLPAAGDCANFPGLEI*IVPPWA
Trigger: AGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGG...GAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR TCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTAT +
Preference number: 2 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYTQCRN*LVPRRY
Trigger: ATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGT...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR TCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTAT +
Preference number: 2 (lower is better)
Translates to: PDSSRPPTERKSQAIMKATQCRN*LVPRRY
Trigger: ATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGT...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR TCA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCAGTAATGAACCTCAGCTaGATGTGCCGACAGCGGAGT +
Preference number: 2 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPVMNLS*MCRQRS
Trigger: ACTCCGCTGTCGGCACATTCAGCTGAGGTTCATTAC...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 2 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
3UTR-3UTR GCA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAACTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 2 (lower is better)
Translates to: QIKVSSVSVITAAFHILELDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR CCA 90 bp GTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 2 (lower is better)
Translates to: VLLLLPAAGDCANFRAMQNTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...CTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490460.5
3UTR-3UTR CCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 2 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490460.5
3UTR CAA 90 bp CATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTT +
Preference number: 2 (lower is better)
Translates to: HSLAASLFFISLSSR*RVASSASCWGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
3UTR-3UTR TCA 90 bp AAGAACTGCTGTGTGCCATCAGCTGATTGTGCTGCGTACTGTACAATTGTAGCAAATGCCTGCAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 2 (lower is better)
Translates to: KNCCVPSADCAAYCTIVANACSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTGCAGGCATT...TGCTACAATTGTACAGTACGCAGCACAATCAGCTGATGGCACACAGCAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR GCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACTGTACCCCGAAGGTATaGAATGCGATCCCAACAGGC +
Preference number: 2 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANCTPKV*NAIPTG
Trigger: GCCTGTTGGGATCGCATTGCATACCTTCGGGGTACA...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTATGTACCCCGAAGGTATaGAATGCGATCCCAACAGGC +
Preference number: 2 (lower is better)
Translates to: SRPPTERKSQAIMKAETLCTPKV*NAIPTG
Trigger: GCCTGTTGGGATCGCATTGCATACCTTCGGGGTACA...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp TCTTTCGACGTCGACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 2 (lower is better)
Translates to: SFDVDILWQLPCFSLASALDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...AGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464475.1
3UTR-3UTR CCA 90 bp ATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 2 (lower is better)
Translates to: ISLSSRLRVASSASCWGLISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...CAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000490460.5
3UTR-3UTR CCA 90 bp CATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 2 (lower is better)
Translates to: HSLAASLFFISLSSRLRVSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...AACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
3UTR-3UTR GCA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 2 (lower is better)
Translates to: VETDLYPEGMQCDPNRLIPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp TCAGCTGAATGTGCCGACAGCGGAGTATCTGATCTAATGTGGACTTTGAAGCATTGTACCCCGAAGGTATaGAATGCGATCCCAACAGGC +
Preference number: 2 (lower is better)
Translates to: SAECADSGVSDLMWTLKHCTPKV*NAIPTG
Trigger: GCCTGTTGGGATCGCATTGCATACCTTCGGGGTACA...ATGCTTCAAAGTCCACATTAGATCAGATACTCCGCTGTCGGCACATTCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 2 (lower is better)
Translates to: SSSISFLFWTSSTATRLSKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR GCA 90 bp TCTTTCGACGTCGACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 2 (lower is better)
Translates to: SFDVDILWQLPCFSLASAASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...AGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
3UTR-3UTR GCA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: DKQIKVSSVSVITAAFHIASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490460.5
3UTR-3UTR CCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 2 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR TCA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTAT +
Preference number: 2 (lower is better)
Translates to: VETDLYPEGMQCDPNRLITQCRN*LVPRRY
Trigger: ATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGT...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 2 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp CTTTCTTTCGACGTCGACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: LSFDVDILWQLPCFSLASASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...TGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCGAAAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
3UTR-3UTR CCA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTTGGTTGTTCGCTAAATaGCAAAATAGGGGGCCACCA +
Preference number: 2 (lower is better)
Translates to: VETDLYPEGMQCDPNRLIWLFAK*QNRGPP
Trigger: TGGTGGCCCCCTATTTTGCCATTTAGCGAACAACCA...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 2 (lower is better)
Translates to: SSSISFLFWTSSTATRLSDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464475.1
3UTR-3UTR GCA 90 bp ATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: ISLSSRLRVASSASCWGLKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...CAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464475.1
3UTR-3UTR GCA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 2 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 2 (lower is better)
Translates to: DKQIKVSSVSVITAAFHIKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR CCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 2 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
3UTR-3UTR GCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 2 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 2 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR CCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 2 (lower is better)
Translates to: SSSISFLFWTSSTATRLSNTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR CCA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAACTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 2 (lower is better)
Translates to: QIKVSSVSVITAAFHILELHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR CCA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAAATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 2 (lower is better)
Translates to: QIKVSSVSVITAAFHILEISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR TCA 90 bp TCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTGGCATAGCTGGGTTTACAACTCGCACATaGCAACATTTCCAAGTATCC +
Preference number: 2 (lower is better)
Translates to: STSFLGLCGTKKIFGIAGFTTRT*QHFQVS
Trigger: GGATACTTGGAAATGTTGTCATGTGCGAGTTGTAAA...CCCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469949.6
3UTR-3UTR GCA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 2 (lower is better)
Translates to: PPTERKSQAIMKAETLTARSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 2 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CCA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 2 (lower is better)
Translates to: DKQIKVSSVSVITAAFHILHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR GCA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCAAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 2 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 2 (lower is better)
Translates to: SRPPTERKSQAIMKAETLRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR GCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 2 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR GCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 2 (lower is better)
Translates to: GSCKYVALEQALQILHFKKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 2 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR GCA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 2 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR GCA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAAAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: QIKVSSVSVITAAFHILEKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR GCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGACCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 2 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 2 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWNTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR CCA 90 bp CATGCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCAAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 2 (lower is better)
Translates to: HAIDKQIKVSSVSVITAANTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...TGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR CCA 90 bp TCTTTCTTTCGACGTCGACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 2 (lower is better)
Translates to: SFFRRRHSLAASLFFISLNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...GAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCGAAAGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR TCA 90 bp TATATGCTAGTTGGTACTGCCATGGTAGCAATACTAGGTGGTGTTCCTTCTTCCATCAATTACACCTTCTaGTTCTGCAGATTCATCTGT +
Preference number: 2 (lower is better)
Translates to: YMLVGTAMVAILGGVPSSINYTF*FCRFIC
Trigger: ACAGATGAATCTGCAGAATCAGAAGGTGTAATTGAT...GGAAGAAGGAACACCACCTAGTATTGCTACCATGGCAGTACCAACTAGCATATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGAGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 2 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
3UTR-3UTR CCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 2 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFLHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR GCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 2 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR GCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 2 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR CCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 2 (lower is better)
Translates to: SCKYVALEQALQILHFKNGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR CCA 90 bp AGTCAAAGACAGTTACTCTACTTTATGGCAATAAAGATCTTTGAGGGCCTTGAGCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 2 (lower is better)
Translates to: SQRQLLYFMAIKIFEGLELHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...CTCAAGGCCCTCAAAGATCTTTATTGCCATAAAGTAGAGTAACTGTCTTTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490460.5
3UTR-3UTR GCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 2 (lower is better)
Translates to: GSCKYVALEQALQILHFKRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR GCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: GSCKYVALEQALQILHFKKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 2 (lower is better)
Translates to: MGAASMWHWNKPYKYCILRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: MGAASMWHWNKPYKYCILKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR GCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 2 (lower is better)
Translates to: SCKYVALEQALQILHFKNRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR GCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATCCAAACACTACAAAGTaGAACCAACATGGTTCTATT +
Preference number: 2 (lower is better)
Translates to: SCKYVALEQALQILHFKNPNTTK*NQHGSI
Trigger: AATAGAACCATGTTGGTTGCACTTTGTAGTGTTTGG...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
3UTR-3UTR GCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 2 (lower is better)
Translates to: SCKYVALEQALQILHFKNSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR GCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 2 (lower is better)
Translates to: SCKYVALEQALQILHFKNKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR GCA 72 bp TGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATaGAGCCATCACCACTCCCTGTGGCAAAGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: CQLLGTVQTSGR*SHHHSLWQSSS
Trigger: ACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR GCA 72 bp CTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTTCCGGGCGATGCAGCC +
Preference number: 3 (lower is better)
Translates to: LSSRLRVASSAS*WGLCKLPGDAA
Trigger: GGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
3UTR GCA 72 bp TTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCAGCCATCACCACTCCC +
Preference number: 3 (lower is better)
Translates to: LRVASSASCWGL*KLPGDAAITTP
Trigger: GGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CAA 90 bp CTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCAGTCACCAGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: LLLPAAGDCANFRAMQPSVTSGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGAC...TGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CAA 90 bp GACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: DCANFRAMQPSPLPVAKQALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...CTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR CCA 72 bp AGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCGGGCGATGCAGCCATC +
Preference number: 3 (lower is better)
Translates to: SSRLRVASSASC*GLCKLPGDAAI
Trigger: GATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CAA 90 bp TCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTAGGAGCTCGGGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 3 (lower is better)
Translates to: SGRCSHHHSLWQSSSRSSGYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCC...CGAGCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR CCA 72 bp CAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGCTCGGATCTGGTAAGT +
Preference number: 3 (lower is better)
Translates to: QTSGRCSHHHSL*QSSSRSSDLVS
Trigger: ACTTACCAGATCCGAGCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CAA 90 bp ATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: ISLSSRLRVASSASCWGLALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...CAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
3UTR-3UTR CAA 90 bp ATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 3 (lower is better)
Translates to: ISLSSRLRVASSASCWGLSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...CAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
3UTR-3UTR CAA 90 bp CTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCAGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGCA +
Preference number: 3 (lower is better)
Translates to: LLPAAGDCANFRAMQPSPEELLN*SLLMPA
Trigger: TGCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...TGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR TCA 72 bp AGGGCGCGTGCAAGGATCAGCACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTATGCAATGCGATCCCAA +
Preference number: 3 (lower is better)
Translates to: RARARISTQCRN*LVPRRYAMRSQ
Trigger: TTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGTGCTGATCCTTGCACGCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR TCA 72 bp GCTGCCTGGGACAAAGAACTGCTGTGTGCCATCAGCTaGTTGTGCTGCGTACTGTACAATTGTAGCACCTGG +
Preference number: 3 (lower is better)
Translates to: AAWDKELLCAIS*LCCVLYNCSTW
Trigger: CCAGGTGCTACAATTGTACAGTACGCAGCACAATCAGCTGATGGCACACAGCAGTTCTTTGTCCCAGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR GCA 72 bp CAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGT +
Preference number: 3 (lower is better)
Translates to: QLPCFSLASALV*VLLLLPAAGDC
Trigger: ACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
3UTR CCA 72 bp TGGCAAAGCAGCAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGCTTGAACAACAACCTG +
Preference number: 3 (lower is better)
Translates to: WQSSSRSSDLVS*HVTSGSLNNNL
Trigger: CAGGTTGTTGTTCAAGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTGCTGCTTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CAA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 3 (lower is better)
Translates to: SSSISFLFWTSSTATRLSSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000490460.5
3UTR-3UTR CAA 90 bp GCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 3 (lower is better)
Translates to: ALVCVLLLLPAAGDCANFLSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...GAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CAA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCAGTGTAGAAACTGACTaGTACCCCGAAGGTATGCAA +
Preference number: 3 (lower is better)
Translates to: PDSSRPPTERKSQAIMKASVETD*YPEGMQ
Trigger: TTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CAA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 3 (lower is better)
Translates to: PPTERKSQAIMKAETLTAAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
3UTR-3UTR CAA 90 bp ATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 3 (lower is better)
Translates to: IQTGFLRVTRVLPTSPHGAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...GCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
3UTR-3UTR CAA 90 bp CATGCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCAGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: HAIDKQIKVSSVSVITAAALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...TGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490460.5
3UTR-3UTR CAA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CAA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CAA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 3 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
3UTR-3UTR CAA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAAGTGTAGAAACTGACTaGTACCCCGAAGGTATGCAA +
Preference number: 3 (lower is better)
Translates to: SRPPTERKSQAIMKAETLSVETD*YPEGMQ
Trigger: TTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CAA 90 bp TCAGCTGAATGTGCCGACAGCGGAGTATCTGATCTAATGTGGACTTTGAAGCATGTGAGGGCTTTGGGCTaGTTCCCTGAAGCTTTTTAT +
Preference number: 3 (lower is better)
Translates to: SAECADSGVSDLMWTLKHVRALG*FPEAFY
Trigger: ATAAAAAGCTTCAGGGAACAAGCCCAAAGCCCTCAC...ATGCTTCAAAGTCCACATTAGATCAGATACTCCGCTGTCGGCACATTCAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
3UTR GCA 72 bp TTGCCCCGTGCTAGTCTGATATATGCTAGTTGGTACTaGCATGGTAGCAATACTAGGTGGTGTTCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LPRASLIYASWY*HGSNTRWCSFF
Trigger: GAAGAAGGAACACCACCTAGTATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR-3UTR CAA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CAA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: PPTERKSQAIMKAETLTALHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR-3UTR CAA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 3 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR TCA 72 bp CCTTGGGCTATAGCAATGTATTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACTGCCATGGTAGCAATA +
Preference number: 3 (lower is better)
Translates to: PWAIAMYCPVLV*YMLVGTAMVAI
Trigger: TATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACATTGCTATAGCCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
3UTR CCA 72 bp ATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTaGCATAGCTGGGCAAAACAGAGAAATGCCATTCCA +
Preference number: 3 (lower is better)
Translates to: ILPRPMWDQEDF*HSWAKQRNAIP
Trigger: TGGAATGGCATTTCTCTGTTTTGCCCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469949.6
3UTR GCA 72 bp ACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTaGATTCCACATCCTGGAACAACATTCCCAATTCAA +
Preference number: 3 (lower is better)
Translates to: TDQSKLGKCDHG*IPHPGTTFPIQ
Trigger: TTGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
3UTR-3UTR CAA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 3 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR CAA 90 bp CAAACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 3 (lower is better)
Translates to: QTLIQTGFLRVTRVLPTSLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...ACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR CAA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 3 (lower is better)
Translates to: SCKYVALEQALQILHFKNAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
3UTR-3UTR CAA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 3 (lower is better)
Translates to: RMGAASMWHWNKPYKYCILASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR CAA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 3 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR CAA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 3 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR CAA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: SCKYVALEQALQILHFKNLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR-3UTR CAA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 3 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
3UTR CCA 72 bp ATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTaGAACAAGCCTTACAAATATTGCATTTTAAGAATA +
Preference number: 3 (lower is better)
Translates to: MTHRMGAASMWH*NKPYKYCILRI
Trigger: TATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCTGGGTGCACAGCCCTaGGGCCATCCCCACCGTGAG +
Preference number: 4 (lower is better)
Translates to: CGHPHREMVERARARISTLGAQP*GHPHRE
Trigger: CTCACGGTGGGGATGGCCGCAGGGCTGTGCACCCAG...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp GGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCAGCTGGGTGCACAGCCCTaGGGCCATCCCCACCGTGAG +
Preference number: 4 (lower is better)
Translates to: GHPHREMVERARARISTQLGAQP*GHPHRE
Trigger: CTCACGGTGGGGATGGCCGCAGGGCTGTGCACCCAG...CTGGGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCGGCCATCCCCACCGTaGGATGGTAGAAAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: CGHPHREMVERARARISTRPSPP*DGRKGA
Trigger: CGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCG...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp GCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: ASCWGLCKLPGDAAITTPSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...GGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR TCA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGCGGCCATCCCCACCGTaGGATGGTAGAAAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKRPSPP*DGRKGA
Trigger: CGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCG...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCAGCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GHPHREMVERARARISTQHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...CTGGGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: CGHPHREMVERARARISTHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp TCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTAGGAGCTCGCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SGRCSHHHSLWQSSSRSSHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...CGAGCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR GCA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGCCATCTTCTTCTGGGTaGACAGCCCTGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKPSSSG*TALRPS
Trigger: GGATGGCCGCAGGGCTGTGCACCCAGAAGAAGATGG...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCATCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: LLPAAGDCANFRAMQPSPSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...TGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CCA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGACAGCCATCTTCTTCTaGGTGCACAGCCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKTAIFF*VHSPAA
Trigger: GGCCGCAGGGCTGTGCACCCAGAAGAAGATGGCTGT...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp CACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTCCTCGGCCATCCCCACCGTaGGATGGTAGAAAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: HVSFPQVHMAISRTAASPRPSPP*DGRKGA
Trigger: CGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCG...AGGAGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR TCA 90 bp TCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SRLRVASSASCWGLCKLPSGPRH*LRTRGG
Trigger: ACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCT...CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490460.5
ENST00000495960.5
CDS-3UTR GCA 90 bp GGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCAGCCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: GHPHREMVERARARISTQPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...CTGGGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp TTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCTGTGTGCCATCAGCTaGTTGTGCTGCGTACTGTAC +
Preference number: 4 (lower is better)
Translates to: FFCQLLGTVQTSGRCSHHLCAIS*LCCVLY
Trigger: GTACAGTACGCAGCACAATCAGCTGATGGCACACAG...GTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR TCA 90 bp TGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTATCACCAGTGGCAGCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CKLPGDAAITTPCGKAAVSPVAA*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGA...TACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR TCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: CGHPHREMVERARARISTTQCRN*LVPRRY
Trigger: ATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGT...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCCGGCCATCCCCACCGTaGGATGGTAGAAAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: SSSISFLFWTSSTATRLSRPSPP*DGRKGA
Trigger: CGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCG...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR TCA 90 bp GCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCTCCTCACGTCAGCTGTaGTGCGGTAGCCGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ASLFFISLSSRLRVASSASSRQL*CGSRGL
Trigger: GAGGCCGCGGCTACCGCATCACAGCTGACGTGAGGA...GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR TCA 90 bp GCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAGTCACCAGTGGCAGCTaGGCTAAAGCAGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: ASALVCVLLLLPAAGDCAVTSGS*AKAGIE
Trigger: TTCAATCCCTGCTTTAGCTCAGCTGCCACTGGTGAC...TGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000490460.5
CDS-3UTR GCA 90 bp GTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: VLLLLPAAGDCANFRAMQASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...CTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR GCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: CGHPHREMVERARARISTKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR GCA 90 bp GGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCAGCAAAGAACTGCTGTGTaGCATCAGCTGATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GHPHREMVERARARISTQQRTAV*HQLIVL
Trigger: CAGCACAATCAGCTGATGGCACACAGCAGTTCTTTG...CTGGGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR GCA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCTGGGTGCACAGCCCTaGGGCCATCCCCACCGTGAG +
Preference number: 4 (lower is better)
Translates to: VETDLYPEGMQCDPNRLILGAQP*GHPHRE
Trigger: CTCACGGTGGGGATGGCCGCAGGGCTGTGCACCCAG...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAACTGGGTGCACAGCCCTaGGGCCATCCCCACCGTGAG +
Preference number: 4 (lower is better)
Translates to: QIKVSSVSVITAAFHILELGAQP*GHPHRE
Trigger: CTCACGGTGGGGATGGCCGCAGGGCTGTGCACCCAG...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR CCA 90 bp TTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGACATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: FACCFFCQLLGTVQTSGRHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...TCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR CCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCACAGCCATCTTCTTCTaGGTGCACAGCCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: PDSSRPPTERKSQAIMKATAIFF*VHSPAA
Trigger: GGCCGCAGGGCTGTGCACCCAGAAGAAGATGGCTGT...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCGTTAAACCGCTCCCCTaGGCCGCACGGCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLVKPLP*AARLSQ
Trigger: CTGAGAGAGCCGTGCGGCTCAGGGGAGCGGTTTAAC...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000374728.7
CDS-3UTR GCA 90 bp ATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: ISLSSRLRVASSASCWGLLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...CAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000490460.5
CDS-3UTR GCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGGTAGAAAGGGCGCGTaGAAGGATCAGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: PDSSRPPTERKSQAIMKAGRKGA*KDQHPV
Trigger: CACTGGGTGCTGATCCTTGCACGCGCCCTTTCTACC...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCTCGAACTCCGCCCCCTaGCGGCCGCCAGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFSNSAP*RPPAGV
Trigger: CACTCCTGCTGGCGGCCGGCAGGGGGCGGAGTTCGA...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR CCA 90 bp CACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTCCTACAGCCATCTTCTTCTaGGTGCACAGCCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: HVSFPQVHMAISRTAASPTAIFF*VHSPAA
Trigger: GGCCGCAGGGCTGTGCACCCAGAAGAAGATGGCTGT...AGGAGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR CCA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTTGGCATGTCACCAGTaGCAGCTGTGTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKLACHQ*QLCHLQ
Trigger: CTGGAGATGACACAGCTGCCACTGGTGACATGCCAA...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356917.9
CDS-3UTR TCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCTCACCAGTGGCAGCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PDSSRPPTERKSQAIMKASPVAA*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGA...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR TCA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTGGCCGCCAGCAGGAGTaGAGCGCCACAATCCAACAA +
Preference number: 4 (lower is better)
Translates to: SHVSFPQVHMAISRTAASGRQQE*SATIQQ
Trigger: TTGTTGGATTGTGGCGCTTCACTCCTGCTGGCGGCC...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR TCA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCTCCTCACGTCAGCTGTaGTGCGGTAGCCGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: DKQIKVSSVSVITAAFHISSRQL*CGSRGL
Trigger: GAGGCCGCGGCTACCGCATCACAGCTGACGTGAGGA...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000490460.5
CDS-3UTR GCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CACTCCCGGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: HSRAASLFFISLSSRLRVLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...AACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCCGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR GCA 90 bp CCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PQLSFACCFFCQLLGTVQEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...TTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR CAA 72 bp CGCGTGCAAGGATCAGCACCCAGTGTAGAAACTGACTaGTACCCCGAAGGTATGCAATGCGATCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: RVQGSAPSVETD*YPEGMQCDPNR
Trigger: CCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGTGCTGATCCTTGCACGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
3UTR CAA 72 bp GCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: AASLFFISLSSR*RVASSASCWGL
Trigger: CAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR TCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: CGHPHREMVERARARISTIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGCGGCCATCCCCACCGTaGGATGGTAGAAAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWRPSPP*DGRKGA
Trigger: CGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCG...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAAAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QIKVSSVSVITAAFHILESGPRH*LRTRGG
Trigger: ACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCT...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374721.7
ENST00000460270.5
ENST00000490460.5
CDS-3UTR TCA 90 bp ACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTGGCATAGCTGGGCAAAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TSFLGLCGTKKIFGIAGQSGPRH*LRTRGG
Trigger: ACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCT...TTGCCCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR TCA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKSGPRH*LRTRGG
Trigger: ACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCT...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374721.7
ENST00000460270.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGGTGGCAGCAGGCGCATaGAGGGACGGCCTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWVAAGA*RDGLSR
Trigger: CCTACTGAGGCCGTCCCTGCATGCGCCTGCTGCCAC...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344351.5
CDS-3UTR GCA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCAAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: SSSISFLFWTSSTATRLSSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000464475.1
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp ATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: IQTGFLRVTRVLPTSPHGSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...GCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CGHPHREMVERARARISTVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PQLSFACCFFCQLLGTVQAHEQT*SLSKKL
Trigger: CAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGC...TTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR GCA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCGGTAGAAAGGGCGCGTaGAAGGATCAGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: PPTERKSQAIMKAETLTAGRKGA*KDQHPV
Trigger: CACTGGGTGCTGATCCTTGCACGCGCCCTTTCTACC...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTACCATCTTCTTCTGGGTaGACAGCCCTGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SRPPTERKSQAIMKAETLPSSSG*TALRPS
Trigger: GGATGGCCGCAGGGCTGTGCACCCAGAAGAAGATGG...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTACAGCCATCTTCTTCTaGGTGCACAGCCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: VETDLYPEGMQCDPNRLITAIFF*VHSPAA
Trigger: GGCCGCAGGGCTGTGCACCCAGAAGAAGATGGCTGT...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCTTGGCATGTCACCAGTaGCAGCCGCCGCAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: SSSISFLFWTSSTATRLSLACHQ*QPPQRD
Trigger: ATCCCTTTGCGGCGGCTGCCACTGGTGACATGCCAA...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460270.5
3UTR CAA 72 bp CCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PCFSLASALVCV*LLLPAAGDCAN
Trigger: GTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR TCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGGTTAAACCGCTCCCCTaGGCCGCACGGCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWVKPLP*AARLSQ
Trigger: CTGAGAGAGCCGTGCGGCTCAGGGGAGCGGTTTAAC...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000374728.7
CDS-3UTR GCA 90 bp GACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: DILWQLPCFSLASALVCVSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...CACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR GCA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp TCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: SRLRVASSASCWGLCKLPKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR GCA 90 bp GGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCAGCCAAACACTACAAAGTaGAACCAACATGGTTCTATT +
Preference number: 4 (lower is better)
Translates to: GHPHREMVERARARISTQPNTTK*NQHGSI
Trigger: AATAGAACCATGTTGGTTGCACTTTGTAGTGTTTGG...CTGGGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp TCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SRLRVASSASCWGLCKLPAHEQT*SLSKKL
Trigger: CAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGC...CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR GCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR GCA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAACATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PNWILKGHTCPSHKSTWQHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...TTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp ATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: IQTGFLRVTRVLPTSPHGHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...GCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: SHVSFPQVHMAISRTAASSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp GTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: VASSASCWGLCKLPGDAANTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...GGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR CCA 90 bp TTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: FACCFFCQLLGTVQTSGRSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...TCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CCA 90 bp CTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCAAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: LLPAAGDCANFRAMQPSPNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...TGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CCA 90 bp TTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACATTCAACTGTTTCCATaGTCATTTGTCCGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: FFCQLLGTVQTSGRCSHHIQLFP*SFVRRK
Trigger: TTTGCGGCGGACAAATGACCATGGAAACAGTTGAAT...GTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR TCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: PDSSRPPTERKSQAIMKACPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp GACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGAATGCCTGCAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: DILWQLPCFSLASALVCVNACSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTGCAGGCATT...CACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR TCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTCGGCCATCCCCACCGTaGGATGGTAGAAAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFRPSPP*DGRKGA
Trigger: CGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCG...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCGTAATGAACCTCAGCTaGATGTGCCGACAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: PPTERKSQAIMKAETLTAVMNLS*MCRQRS
Trigger: ACTCCGCTGTCGGCACATTCAGCTGAGGTTCATTAC...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGGGCCGCCAGCAGGAGTaGAGCGCCACAATCCAACAA +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWGRQQE*SATIQQ
Trigger: TTGTTGGATTGTGGCGCTTCACTCCTGCTGGCGGCC...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000474362.5
CDS-3UTR TCA 90 bp CACATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HMAISRTAASPALIRVNKSGPRH*LRTRGG
Trigger: ACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCT...CTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374721.7
ENST00000460270.5
ENST00000490460.5
CDS-3UTR GCA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCCAAACTTCCGGGCGATaGAGCCATCACCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSQTSGR*SHHHSL
Trigger: CAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTG...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAAGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: PNWILKGHTCPSHKSTWQASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...TTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: LFFISLSSRLRVASSASCASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...GCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR GCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: PDSSRPPTERKSQAIMKAKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR GCA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: CGHPHREMVERARARISTSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCCAAAGAACTGCTGTGTaGCATCAGCTGATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PDSSRPPTERKSQAIMKAQRTAV*HQLIVL
Trigger: CAGCACAATCAGCTGATGGCACACAGCAGTTCTTTG...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR GCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCTGTACCCCGAAGGTATaGAATGCGATCCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLCTPKV*NAIPTG
Trigger: GCCTGTTGGGATCGCATTGCATACCTTCGGGGTACA...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp TCAGCTGAATGTGCCGACAGCGGAGTATCTGATCTAATGTGGACTTTGAAGCATGGTAGAAAGGGCGCGTaGAAGGATCAGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: SAECADSGVSDLMWTLKHGRKGA*KDQHPV
Trigger: CACTGGGTGCTGATCCTTGCACGCGCCCTTTCTACC...ATGCTTCAAAGTCCACATTAGATCAGATACTCCGCTGTCGGCACATTCAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTACTGGGTGCACAGCCCTaGGGCCATCCCCACCGTGAG +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILLGAQP*GHPHRE
Trigger: CTCACGGTGGGGATGGCCGCAGGGCTGTGCACCCAG...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGGGGAGCCTCTTCTGGTaGCTGATCCAGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKGSLFW*LIQPQK
Trigger: TTTCTGTGGCTGGATCAGGCACCAGAAGAGGCTCCC...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTCGAACTCCGCCCCCTaGCGGCCGCCAGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSNSAP*RPPAGV
Trigger: CACTCCTGCTGGCGGCCGGCAGGGGGCGGAGTTCGA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000474362.5
CDS-3UTR GCA 90 bp TCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTGGCATAGCTGGGCAATCCCCGATGGCATaGCAGGGCTGCTTTATTCCG +
Preference number: 4 (lower is better)
Translates to: STSFLGLCGTKKIFGIAGQSPMA*QGCFIP
Trigger: CGGAATAAAGCAGCCCTGGCATGCCATCGGGGATTG...CCCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR CCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCTCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLSDLVS*HVTSGS
Trigger: GCTGCCACTGGTGACATGCCAACTTACCAGATCCGA...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000356917.9
ENST00000361599.8
ENST00000439705.5
CDS-3UTR CCA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp GCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: AASLFFISLSSRLRVASSSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...AGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR CCA 90 bp GTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: VCVLLLLPAAGDCANFRAILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...CGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490460.5
ENST00000495960.5
CDS-3UTR CCA 90 bp TGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTATGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: CKLPGDAAITTPCGKAAVWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCCCAAGGTGGAACAATCCA...TACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CCA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCCTGGGTTAGAAATCTaGATTGTTCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSPGLEI*IVPPWA
Trigger: AGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGG...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp TCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SRLRVASSASCWGLCKLPDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR CCA 90 bp GCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: ALVCVLLLLPAAGDCANFDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...GAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR CCA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTTTGGCATGTCACCAGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: SHVSFPQVHMAISRTAASLACHQ*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACTGGTGACATGCCAA...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CCA 90 bp TTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGAATTCAACTGTTTCCATaGTCATTTGTCCGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: FACCFFCQLLGTVQTSGRIQLFP*SFVRRK
Trigger: TTTGCGGCGGACAAATGACCATGGAAACAGTTGAAT...TCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490460.5
ENST00000495960.5
CDS-3UTR TCA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAGTAATGAACCTCAGCTaGATGTGCCGACAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: SRPPTERKSQAIMKAETLVMNLS*MCRQRS
Trigger: ACTCCGCTGTCGGCACATTCAGCTGAGGTTCATTAC...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp TCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: SLAASLFFISLSSRLRVAASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...AGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR GCA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRPPTERKSQAIMKAETLASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp AGGAGCTCGGATCTGGTAAGTTGGCATGTCACCAGTGGCAGCTTGAACAACAACCAAAGAACTGCTGTGTaGCATCAGCTGATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSSDLVSWHVTSGSLNNNQRTAV*HQLIVL
Trigger: CAGCACAATCAGCTGATGGCACACAGCAGTTCTTTG...GTTGTTGTTCAAGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR GCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCCCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCGGTAGAAAGGGCGCGTaGAAGGATCAGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFGRKGA*KDQHPV
Trigger: CACTGGGTGCTGATCCTTGCACGCGCCCTTTCTACC...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR GCA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGAGATTCATCTGTCTCTaGAATTGCTGCTACCTTTTC +
Preference number: 4 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKRFICL*NCCYLF
Trigger: GAAAAGGTAGCAGCAATTGCAGAGACAGATGAATCT...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361599.8
CDS-3UTR CCA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp TTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGAATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: FACCFFCQLLGTVQTSGRILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...TCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490460.5
ENST00000495960.5
CDS-3UTR CCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATTCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCAGCAGCCATGTGACTTaGGGCAAGTTCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSSISFLFWTSSTATRLSSSHVT*GKFSFL
Trigger: GAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CCA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTTCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SHVSFPQVHMAISRTAASSDLVS*HVTSGS
Trigger: ACTGCCACTGGTGACATGCCAACTTACCAGATCCGA...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR TCA 90 bp TCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: SLASALVCVLLLLPAAGDIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...GTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR TCA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCATGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGTCACCAGTGGCAGCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWSPVAA*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGA...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR TCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATCATGGCTGTGGTGTCTaGATTACTCCCTGGACATGT +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNHGCGV*ITPWTC
Trigger: ACATGTCCAGGGAGTAATTCAGACACCACAGCCATG...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR TCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCISGPRH*LRTRGG
Trigger: ACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCT...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374721.7
ENST00000460270.5
ENST00000474362.5
CDS-3UTR TCA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCCAGCCACAGAAACCTaGGCTAAAGCAGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWPATET*AKAGIE
Trigger: TTCAATCCCTGCTTTAGCTCAGGTTTCTGTGGCTGG...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR TCA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCGTCACCAGTGGCAGCTaGGCTAAAGCAGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSVTSGS*AKAGIE
Trigger: TTCAATCCCTGCTTTAGCTCAGCTGCCACTGGTGAC...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCAAACTTCCGGGCGATaGAGCCATCACCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKQTSGR*SHHHSL
Trigger: CAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTG...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: VCVLLLLPAAGDCANFRASNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...CGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464475.1
CDS-3UTR GCA 90 bp GTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: VLLLLPAAGDCANFRAMQKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...CTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464475.1
CDS-3UTR GCA 90 bp CCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCTATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 4 (lower is better)
Translates to: PDSSRPPTERKSQAIMKAYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...GGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACCCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTACCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: SRPPTERKSQAIMKAETLPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CATGCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCACATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: HAIDKQIKVSSVSVITAAHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...TGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CCA 90 bp CACATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: HMAISRTAASPALIRVNKSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...CTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGGTCTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: MAISRTAASPALIRVNKVSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAAGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: PNWILKGHTCPSHKSTWQGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...TTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CCA 90 bp TCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: SLASALVCVLLLLPAAGDLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...GTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CCA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCACCTGGGTTAGAAATCTaGATTGTTCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPPGLEI*IVPPWA
Trigger: AGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGG...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp GCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AASLFFISLSSRLRVASSNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...AGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCTTGGCATGTCACCAGTaGCAGCTTGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLLACHQ*QLEQQP
Trigger: AGGTTGTTGTTCAAGCTGCCACTGGTGACATGCCAA...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTACAGCCATCTTCTTCTaGGTGCACAGCCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCITAIFF*VHSPAA
Trigger: GGCCGCAGGGCTGTGCACCCAGAAGAAGATGGCTGT...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp ATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCTGGTTGTTCGCTAAATaGCAAAATAGGGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: IQTGFLRVTRVLPTSPHGWLFAK*QNRGPP
Trigger: TGGTGGCCCCCTATTTTGCCATTTAGCGAACAACCA...GCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR CCA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTTGGTTGTTCGCTAAATaGCAAAATAGGGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SHVSFPQVHMAISRTAASWLFAK*QNRGPP
Trigger: TGGTGGCCCCCTATTTTGCCATTTAGCGAACAACCA...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR CCA 90 bp TCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTGGCATAGCTGGGTACTTCAATCCCCGATaGCATGCCAGGGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: STSFLGLCGTKKIFGIAGYFNPR*HARAAL
Trigger: TAAAGCAGCCCTGGCATGCCATCGGGGATTGAAGTA...CCCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR TCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR TCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGAATGCCTGCAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKNACSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTGCAGGCATT...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR TCA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCACGACAGCGGAGTATCTaGTCTAATGTGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPRQRSI*SNVDFE
Trigger: TTCAAAGTCCACATTAGATCAGATACTCCGCTGTCG...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCGTAATGAACCTCAGCTaGATGTGCCGACAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFVMNLS*MCRQRS
Trigger: ACTCCGCTGTCGGCACATTCAGCTGAGGTTCATTAC...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR TCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGGCCACAATCCAACAATaGAATGGAACCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKATIQQ*NGTGEG
Trigger: CCCCTCCCCGGTTCCATTTCATTGTTGGATTGTGGC...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000474362.5
CDS-3UTR TCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACTCCTCACGTCAGCTGTaGTGCGGTAGCCGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHSSRQL*CGSRGL
Trigger: GAGGCCGCGGCTACCGCATCACAGCTGACGTGAGGA...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000474362.5
CDS-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CAAACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: QTLIQTGFLRVTRVLPTSASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...ACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CATGCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCAGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HAIDKQIKVSSVSVITAAASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...TGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp TCTTTCTTTCGACGTCGACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SFFRRRHSLAASLFFISLASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...GAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCGAAAGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR GCA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AASLFFISLSSRLRVASSAHEQT*SLSKKL
Trigger: CAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGC...AGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTGGTAGAAAGGGCGCGTaGAAGGATCAGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFGRKGA*KDQHPV
Trigger: CACTGGGTGCTGATCCTTGCACGCGCCCTTTCTACC...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCTGGCCCGAAGGTAACTaGACTAGAGTTACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFWPEGN*TRVTAG
Trigger: CCCAGCTGTAACTCTAGTGCAGTTACCTTCGGGCCA...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR CCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: VETDLYPEGMQCDPNRLIGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CCA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCATCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACTTGGCATGTCACCAGTaGCAGCTTGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANLACHQ*QLEQQP
Trigger: AGGTTGTTGTTCAAGCTGCCACTGGTGACATGCCAA...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTATGGTTGTTCGCTAAATaGCAAAATAGGGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SRPPTERKSQAIMKAETLWLFAK*QNRGPP
Trigger: TGGTGGCCCCCTATTTTGCCATTTAGCGAACAACCA...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCTTGGCATGTCACCAGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFLACHQ*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACTGGTGACATGCCAA...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CCA 90 bp CAAACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTTTGGCATGTCACCAGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: QTLIQTGFLRVTRVLPTSLACHQ*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACTGGTGACATGCCAA...ACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTACTGGGGAGCCTCTTCTaGTGCCTGATCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILLGSLF*CLIQPQ
Trigger: CTGTGGCTGGATCAGGCACCAGAAGAGGCTCCCCAG...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR CCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCAATAACCCATGGCTGTaGTGTCTGAATTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: SSSISFLFWTSSTATRLSNNPWL*CLNYSL
Trigger: CAGGGAGTAATTCAGACACCACAGCCATGGGTTATT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR TCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATGCCTGCAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKNACSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTGCAGGCATT...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR TCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCTGTGTGCCATCAGCTaGTTGTGCTGCGTACTGTAC +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKLCAIS*LCCVLY
Trigger: GTACAGTACGCAGCACAATCAGCTGATGGCACACAG...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR TCA 90 bp TCAGCTGAATGTGCCGACAGCGGAGTATCTGATCTAATGTGGACTTTGAAGCATACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: SAECADSGVSDLMWTLKHTQCRN*LVPRRY
Trigger: ATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGT...ATGCTTCAAAGTCCACATTAGATCAGATACTCCGCTGTCGGCACATTCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGGTAATGAACCTCAGCTaGATGTGCCGACAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKVMNLS*MCRQRS
Trigger: ACTCCGCTGTCGGCACATTCAGCTGAGGTTCATTAC...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSGPRH*LRTRGG
Trigger: ACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374721.7
ENST00000429130.7
ENST00000460270.5
ENST00000474362.5
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 4 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp ATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCTATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 4 (lower is better)
Translates to: IQTGFLRVTRVLPTSPHGYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...GCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGTGTACCCCGAAGGTATaGAATGCGATCCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKCTPKV*NAIPTG
Trigger: GCCTGTTGGGATCGCATTGCATACCTTCGGGGTACA...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCCATCTTCTTCTGGGTaGACAGCCCTGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMPSSSG*TALRPS
Trigger: GGATGGCCGCAGGGCTGTGCACCCAGAAGAAGATGG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGGCCATAATGGGCTTCTaGAGACAGAACTGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWAIMGF*RQNCLV
Trigger: AACAAGACAGTTCTGTCTGCAGAAGCCCATTATGGC...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000473940.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTTGGCATGTCACCAGTaGCAGCAGGCGCATGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLACHQ*QQAHAG
Trigger: CCCTGCATGCGCCTGCTGCCACTGGTGACATGCCAA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344351.5
CDS-3UTR CCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCISSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: IQTGFLRVTRVLPTSPHGLHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...GCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CCA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: PPTERKSQAIMKAETLTALHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR CCA 90 bp CCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAACTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: PNWILKGHTCPSHKSTWQLHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...TTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: SSSISFLFWTSSTATRLSISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000464475.1
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATTCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGACAGCCATCTTCTTCTaGGTGCACAGCCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMTAIFF*VHSPAA
Trigger: GGCCGCAGGGCTGTGCACCCAGAAGAAGATGGCTGT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCTGGGGAGCCTCTTCTaGTGCCTGATCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLGSLF*CLIQPQ
Trigger: CTGTGGCTGGATCAGGCACCAGAAGAGGCTCCCCAG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
3UTR CAA 72 bp ATCAGATCCTGGGTTAGAAATCTGGATTGTTCCACCTaGGGCTATAGCAATGTATTGCCCCGTGCTAGTCTG +
Preference number: 4 (lower is better)
Translates to: IRSWVRNLDCST*GYSNVLPRASL
Trigger: CAGACTAGCACGGGGCAATACATTGCTATAGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGGATCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR TCA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGTGCATTACAGTTTCATaGCGTGTTTCCCTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWCITVS*RVSLFK
Trigger: CTTGAAGAGGGAAACACGTCATGAAACTGTAATGCA...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344351.5
ENST00000474931.5
CDS-3UTR TCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: SSSISFLFWTSSTATRLSIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR TCA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: SHVSFPQVHMAISRTAASIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR TCA 90 bp ATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGGTCTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: MAISRTAASPALIRVNKVCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR TCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGCTGTGTGCCATCAGCTaGTTGTGCTGCGTACTGTAC +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKLCAIS*LCCVLY
Trigger: GTACAGTACGCAGCACAATCAGCTGATGGCACACAG...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR TCA 90 bp ATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGGTCACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: MAISRTAASPALIRVNKVTQCRN*LVPRRY
Trigger: ATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGT...GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR TCA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCCGACAGCGGAGTATCTaGTCTAATGTGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSRQRSI*SNVDFE
Trigger: TTCAAAGTCCACATTAGATCAGATACTCCGCTGTCG...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR TCA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAAAACATAGATTATGCTaGTGCCACCACATCCACCAA +
Preference number: 4 (lower is better)
Translates to: SRPPTERKSQAIMKAETLKHRLC*CHHIHQ
Trigger: TTGGTGGATGTGGTGGCATCAGCATAATCTATGTTT...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361599.8
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGCCTCTTCTGGTGCCTaGTCCAGCCACAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMASSGA*SSHRNL
Trigger: CAGGTTTCTGTGGCTGGATCAGGCACCAGAAGAGGC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR GCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGACAAACTTCCGGGCGATaGAGCCATCACCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGQTSGR*SHHHSL
Trigger: CAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTG...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGAAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CACATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: HMAISRTAASPALIRVNKKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...CTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTACTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp CACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTCCTCCAAACACTACAAAGTaGAACCAACATGGTTCTATT +
Preference number: 4 (lower is better)
Translates to: HVSFPQVHMAISRTAASPPNTTK*NQHGSI
Trigger: AATAGAACCATGTTGGTTGCACTTTGTAGTGTTTGG...AGGAGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344351.5
ENST00000356917.9
ENST00000439705.5
ENST00000460270.5
CDS-3UTR GCA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SHVSFPQVHMAISRTAASVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
ENST00000490460.5
CDS-3UTR GCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CAAACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QTLIQTGFLRVTRVLPTSAHEQT*SLSKKL
Trigger: CAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGC...ACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
ENST00000490460.5
CDS-3UTR GCA 90 bp TGTTTTGTGATTGCCATCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CFVIAIYILPRPMWDQEDAHEQT*SLSKKL
Trigger: CAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGC...ATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGATGGCAATCACAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTGTACCCCGAAGGTATaGAATGCGATCCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFCTPKV*NAIPTG
Trigger: GCCTGTTGGGATCGCATTGCATACCTTCGGGGTACA...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATCCATCTTCTTCTGGGTaGACAGCCCTGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNPSSSG*TALRPS
Trigger: GGATGGCCGCAGGGCTGTGCACCCAGAAGAAGATGG...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CATGCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCAATCTGTCTCTGCAATTaGTGCTACCTGAACGGTGTG +
Preference number: 4 (lower is better)
Translates to: HAIDKQIKVSSVSVITAAICLCN*CYLNGV
Trigger: CACACCGTTCAGGTAGCAGCAATTGCAGAGACAGAT...TGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR GCA 90 bp TTACAACTCGCACATGACAACATTTCCAAGTATCCCTTGTTAAATCGTTCCTACATGGCATGCCAGGGCTaGTTTATTCCGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LQLAHDNISKYPLLNRSYMACQG*FIPRDS
Trigger: GGAGTCCCTCGGAATAAAGCAGCCCTGGCATGCCAT...GTAGGAACGATTTAACAAGGGATACTTGGAAATGTTGTCATGTGCGAGTTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR CCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTACATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKLHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CCA 90 bp GCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: AASLFFISLSSRLRVASSLHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...AGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR CCA 90 bp CTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: LWQLPCFSLASALVCVLLISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...AAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464475.1
CDS-3UTR CCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGGTCGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: MAISRTAASPALIRVNKVGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CCA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: PPTERKSQAIMKAETLTAILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp ATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: IQTGFLRVTRVLPTSPHGILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...GCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
ENST00000490460.5
CDS-3UTR CCA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: SSSISFLFWTSSTATRLSILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
ENST00000490460.5
CDS-3UTR CCA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: PPTERKSQAIMKAETLTALIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCACTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCCCAAGGTGGAACAATCCA...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGAGCAGCCATGTGACTTaGGGCAAGTTCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKSSHVT*GKFSFL
Trigger: GAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCT...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAATCCAACAATGAAATaGAACCGGGGAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILNPTMK*NRGGAA
Trigger: CGCCGCCCCTCCCCGGTTCCATTTCATTGTTGGATT...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000474362.5
CDS-3UTR TCA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCAATCAATTACACCTTCTaGTTCTGCAGATTCATCTGT +
Preference number: 4 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPINYTF*FCRFIC
Trigger: ACAGATGAATCTGCAGAATCAGAAGGTGTAATTGAT...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAATGCCTGCAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMNACSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTGCAGGCATT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
ENST00000463314.5
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTCACCAGTGGCAGCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSPVAA*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR TCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACGCCTCTTCTGGTGCCTaGTCCAGCCACAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHASSGA*SSHRNL
Trigger: CAGGTTTCTGTGGCTGGATCAGGCACCAGAAGAGGC...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR TCA 90 bp ACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTGGCATAGCTGGGCAATTTACAACTCGCACATaGCAACATTTCCAAGTATCC +
Preference number: 4 (lower is better)
Translates to: TSFLGLCGTKKIFGIAGQFTTRT*QHFQVS
Trigger: GGATACTTGGAAATGTTGTCATGTGCGAGTTGTAAA...TTGCCCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR GCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACCAAACTTCCGGGCGATaGAGCCATCACCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHQTSGR*SHHHSL
Trigger: CAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTG...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGAGCTGCTGGGGACTGTaGAAACTTCCGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRSCWGL*KLPGDA
Trigger: TGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCT...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGACTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp CCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAAAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 4 (lower is better)
Translates to: PNWILKGHTCPSHKSTWQRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...TTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 4 (lower is better)
Translates to: SHVSFPQVHMAISRTAASRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCCCAAACACTACAAAGTaGAACCAACATGGTTCTATT +
Preference number: 4 (lower is better)
Translates to: PPTERKSQAIMKAETLTAPNTTK*NQHGSI
Trigger: AATAGAACCATGTTGGTTGCACTTTGTAGTGTTTGG...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAAGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QIKVSSVSVITAAFHILEVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
ENST00000490460.5
CDS-3UTR GCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
ENST00000490460.5
CDS-3UTR GCA 90 bp GACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: DILWQLPCFSLASALVCVVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...CACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR GCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGCCCGAAGGTATGCAATaGGATCCCAACAGGCTCATT +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKPEGMQ*DPNRLI
Trigger: AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGG...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATGGTAGAAAGGGCGCGTaGAAGGATCAGCACCCAGTG +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNGRKGA*KDQHPV
Trigger: CACTGGGTGCTGATCCTTGCACGCGCCCTTTCTACC...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGGGAGCCTCTTCTGGTaGCTGATCCAGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMGSLFW*LIQPQK
Trigger: TTTCTGTGGCTGGATCAGGCACCAGAAGAGGCTCCC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR CCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTATCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILSDLVS*HVTSGS
Trigger: GCTGCCACTGGTGACATGCCAACTTACCAGATCCGA...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCATCACCACTCCCTGTaGCAAAGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMHHHSL*QSSSRS
Trigger: GCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKNTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNNTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGTCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp ATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGGTCTCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: MAISRTAASPALIRVNKVSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp AGATCCTGGGTTAGAAATCTGGATTGTTCCACCTTGGGCTATAGCAATGTATTGCCTGGGTTAGAAATCTaGATTGTTCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSWVRNLDCSTLGYSNVLPGLEI*IVPPWA
Trigger: AGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGG...CAATACATTGCTATAGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGTTGGCATGTCACCAGTaGCAGCTTGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKLACHQ*QLEQQP
Trigger: AGGTTGTTGTTCAAGCTGCCACTGGTGACATGCCAA...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CCA 90 bp ATATATGCTAGTTGGTACTGCCATGGTAGCAATACTAGGTGGTGTTCCTTCTTCTTGGCATGTCACCAGTaGCAGCTTGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: IYASWYCHGSNTRWCSFFLACHQ*QLEQQP
Trigger: AGGTTGTTGTTCAAGCTGCCACTGGTGACATGCCAA...GAAGAAGGAACACCACCTAGTATTGCTACCATGGCAGTACCAACTAGCATATAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTAGCAGCCATGTGACTTaGGGCAAGTTCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCISSHVT*GKFSFL
Trigger: GAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCT...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACTTGGCATGTCACCAGTaGCAGCCGCCGCAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHLACHQ*QPPQRD
Trigger: ATCCCTTTGCGGCGGCTGCCACTGGTGACATGCCAA...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460270.5
ENST00000474362.5
CDS-3UTR CCA 90 bp TGTTTTGTGATTGCCATCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATCTTCCTAGGCCTATGTaGGACCAAGAAGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: CFVIAIYILPRPMWDQEDLPRPM*DQEDFW
Trigger: CCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAG...ATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGATGGCAATCACAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469949.6
3UTR CAA 72 bp CACATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTCCAAGTCAAAGACAGT +
Preference number: 4 (lower is better)
Translates to: HMAISRTAASPA*IRVNKVQVKDS
Trigger: ACTGTCTTTGACTTGGACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR TCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGTGCATTACAGTTTCATaGCGTGTTTCCCTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWCITVS*RVSLFK
Trigger: CTTGAAGAGGGAAACACGTCATGAAACTGTAATGCA...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344351.5
CDS-3UTR TCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACATCAATTACACCTTCTaGTTCTGCAGATTCATCTGT +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANINYTF*FCRFIC
Trigger: ACAGATGAATCTGCAGAATCAGAAGGTGTAATTGAT...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: DKQIKVSSVSVITAAFHIIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR TCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATAATGCCTGCAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNNACSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTGCAGGCATT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR TCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGACTGTGTGCCATCAGCTaGTTGTGCTGCGTACTGTAC +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGLCAIS*LCCVLY
Trigger: GTACAGTACGCAGCACAATCAGCTGATGGCACACAG...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCTGTGTGCCATCAGCTaGTTGTGCTGCGTACTGTAC +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLCAIS*LCCVLY
Trigger: GTACAGTACGCAGCACAATCAGCTGATGGCACACAG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
ENST00000463314.5
CDS-3UTR TCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATTCACCAGTGGCAGCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNSPVAA*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGA...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR TCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKTQCRN*LVPRRY
Trigger: ATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGT...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGGCAATTGCTGCTACCTaGACGGTGTGTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKAIAAT*TVCISD
Trigger: ATCAGAAATACACACCGTTCAGGTAGCAGCAATTGC...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGCCTCAGCTCTCGTTTaGGTGTTGCTTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMASALV*VLLLLP
Trigger: TGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGCTGGACTTCCAGCACTaGAACTCGGCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRLDFQH*NSALQT
Trigger: TGTCTGGAGAGCCGAGTTGCAGTGCTGGAAGTCCAG...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: SHVSFPQVHMAISRTAASSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAAAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: PNWILKGHTCPSHKSTWQKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...TTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 4 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACCCAAACACTACAAAGTaGAACCAACATGGTTCTATT +
Preference number: 4 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANPNTTK*NQHGSI
Trigger: AATAGAACCATGTTGGTTGCACTTTGTAGTGTTTGG...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAACCAAACACTACAAAGTaGAACCAACATGGTTCTATT +
Preference number: 4 (lower is better)
Translates to: QIKVSSVSVITAAFHILEPNTTK*NQHGSI
Trigger: AATAGAACCATGTTGGTTGCACTTTGTAGTGTTTGG...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344351.5
ENST00000356917.9
ENST00000439705.5
ENST00000460270.5
CDS-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFAHEQT*SLSKKL
Trigger: CAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGC...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTCAAAGAACTGCTGTGTaGCATCAGCTGATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIQRTAV*HQLIVL
Trigger: CAGCACAATCAGCTGATGGCACACAGCAGTTCTTTG...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTGTACCCCGAAGGTATaGAATGCGATCCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMCTPKV*NAIPTG
Trigger: GCCTGTTGGGATCGCATTGCATACCTTCGGGGTACA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAATCTGTCTCTGCAATTaGTGCTACCATCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILICLCN*CYHREV
Trigger: CACCTCCCGATGGTAGCAGCAATTGCAGAGACAGAT...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342105.7
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGAGATTCATCTGTCTCTaGAATTGCTGCTACCATCGG +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKRFICL*NCCYHR
Trigger: CCGATGGTAGCAGCAATTGCAGAGACAGATGAATCT...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342105.7
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGGCCATAATGGGCTTCTaGAGACAGAACTGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKAIMGF*RQNCLV
Trigger: AACAAGACAGTTCTGTCTGCAGAAGCCCATTATGGC...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356917.9
ENST00000473940.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTGGCCCGAAGGTAACTaGACTAGAGTTACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMWPEGN*TRVTAG
Trigger: CCCAGCTGTAACTCTAGTGCAGTTACCTTCGGGCCA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR CCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGATCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGSDLVS*HVTSGS
Trigger: GCTGCCACTGGTGACATGCCAACTTACCAGATCCGA...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000356917.9
ENST00000361599.8
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATTCTTCTGCCAGCTGCTaGGGACTGTGCAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNSSASC*GLCKLP
Trigger: CGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGA...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWLHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGCTACCATCGGGAGGTaGTTACTGTCCTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMATIGR*LLSWNS
Trigger: ACTGTTCCAGGACAGTAACCACCTCCCGATGGTAGC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342105.7
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTTGGCATGTCACCAGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLACHQ*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACTGGTGACATGCCAA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000429130.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGTGGATTGTTCCACCTTaGGCTATAGCAACATCGGGA +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKWIVPP*AIATSG
Trigger: TCCCGATGTTGCTATAGCCCAAGGTGGAACAATCCA...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463314.5
CDS-3UTR CCA 90 bp TGTTTTGTGATTGCCATCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATGATTTTTGGCATAGCTaGGCAAAACAGAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: CFVIAIYILPRPMWDQEDDFWHS*AKQRNA
Trigger: GGCATTTCTCTGTTTTGCCCAGCTATGCCAAAAATC...ATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGATGGCAATCACAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR TCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATCTGTGTGCCATCAGCTaGTTGTGCTGCGTACTGTAC +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNLCAIS*LCCVLY
Trigger: GTACAGTACGCAGCACAATCAGCTGATGGCACACAG...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR TCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTCGACAGCGGAGTATCTaGTCTAATGTGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIRQRSI*SNVDFE
Trigger: TTCAAAGTCCACATTAGATCAGATACTCCGCTGTCG...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGGTAATGAACCTCAGCTaGATGTGCCGACAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRVMNLS*MCRQRS
Trigger: ACTCCGCTGTCGGCACATTCAGCTGAGGTTCATTAC...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCATGGCTGTGGTGTCTaGATTACTCCCTGGACATGT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMHGCGV*ITPWTC
Trigger: ACATGTCCAGGGAGTAATTCAGACACCACAGCCATG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCCAGCCACAGAAACCTaGGCTAAAGCAGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMPATET*AKAGIE
Trigger: TTCAATCCCTGCTTTAGCTCAGGTTTCTGTGGCTGG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR TCA 90 bp ATCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTGGCATAGCTGGAGAGAAAATGTTGCTTaGGGTCTTCTATTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: IYILPRPMWDQEDFWHSWRENVA*GLLFVC
Trigger: GCAAACAAATAGAAGACCTCAAGCAACATTTTCTCT...CCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR GCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACGCTTCTTCTGCCAGCTaGTGGGGACTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHASSAS*WGLCKL
Trigger: AAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGC...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp TGTTTTGTGATTGCCATCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CFVIAIYILPRPMWDQEDVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...ATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGATGGCAATCACAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILAHEQT*SLSKKL
Trigger: CAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGC...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGTATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGATCCTGGGTTAGAAATCTGGATTGTTCCACCTTGGGCTATAGCAATGTATTGTATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 4 (lower is better)
Translates to: RSWVRNLDCSTLGYSNVLYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...CAATACATTGCTATAGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
ENST00000463314.5
CDS-3UTR CCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATTCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNSDLVS*HVTSGS
Trigger: GCTGCCACTGGTGACATGCCAACTTACCAGATCCGA...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGGTCAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: MAISRTAASPALIRVNKVNTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKLHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp TGTTTTGTGATTGCCATCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: CFVIAIYILPRPMWDQEDILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...ATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGATGGCAATCACAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR CCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
ENST00000463314.5
CDS-3UTR CCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGGCTCCTTATCGCTTTTaGTGCCCATACTTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRAPYRF*CPYFGG
Trigger: GCCACCGAAGTATGGGCACCAAAAGCGATAAGGAGC...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342105.7
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACGCTCCTTATCGCTTTTaGTGCCCATACTTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHAPYRF*CPYFGG
Trigger: GCCACCGAAGTATGGGCACCAAAAGCGATAAGGAGC...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342105.7
ENST00000463314.5
CDS-3UTR CCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGAGGTGGTTACTGTCCTaGAACAGTCATTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKRWLLS*NSHFLM
Trigger: CATCAGAAAATGACTGTTCCAGGACAGTAACCACCT...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342105.7
ENST00000463314.5
CDS-3UTR CCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGTTGGCATGTCACCAGTaGCAGCTGTGTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRLACHQ*QLCHLQ
Trigger: CTGGAGATGACACAGCTGCCACTGGTGACATGCCAA...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000488328.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAGCAGCCATGTGACTTaGGGCAAGTTCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSSHVT*GKFSFL
Trigger: GAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000429130.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGATCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGSDLVS*HVTSGS
Trigger: ACTGCCACTGGTGACATGCCAACTTACCAGATCCGA...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348787.6
ENST00000374728.7
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAGCAACATCGGGAGGTaGTTACTGTCCTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSNIGR*LLSWNS
Trigger: ACTGTTCCAGGACAGTAACCACCTCCCGATGTTGCT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463314.5
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR TCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTACGACAGCGGAGTATCTaGTCTAATGTGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILRQRSI*SNVDFE
Trigger: TTCAAAGTCCACATTAGATCAGATACTCCGCTGTCG...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGTGTATTTCTGATGACTaGATAACCCATGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKCISDD*ITHGCG
Trigger: ACCACAGCCATGGGTTATTCAGTCATCAGAAATACA...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTCAGTTTCCTCATCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSVSSS*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGATGAGGAAACTGA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429130.7
CDS-3UTR GCA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: DKQIKVSSVSVITAAFHISNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGCCAAACACTACAAAGTaGAACCAACATGGTTCTATT +
Preference number: 4 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWPNTTK*NQHGSI
Trigger: AATAGAACCATGTTGGTTGCACTTTGTAGTGTTTGG...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMAHEQT*SLSKKL
Trigger: CAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCAAAGAACTGCTGTGTaGCATCAGCTGATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMQRTAV*HQLIVL
Trigger: CAGCACAATCAGCTGATGGCACACAGCAGTTCTTTG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
ENST00000463314.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGATCTGTCTCTGCAATTaGTGCTACCTGAACGGTGTG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMICLCN*CYLNGV
Trigger: CACACCGTTCAGGTAGCAGCAATTGCAGAGACAGAT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR GCA 90 bp TTACAACTCGCACATGACAACATTTCCAAGTATCCCTTGTTAAATCGTTCCTACACTCCTTACACATTGTaGACTGAGCTAAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LQLAHDNISKYPLLNRSYTPYTL*TELKQG
Trigger: TCCCTGCTTTAGCTCAGTGCACAATGTGTAAGGAGT...GTAGGAACGATTTAACAAGGGATACTTGGAAATGTTGTCATGTGCGAGTTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR CCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTATCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCCCAAGGTGGAACAATCCA...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCCTGGGTTAGAAATCTaGATTGTTCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMPGLEI*IVPPWA
Trigger: AGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
ENST00000463314.5
CDS-3UTR CCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACTCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHSDLVS*HVTSGS
Trigger: ACTGCCACTGGTGACATGCCAACTTACCAGATCCGA...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348787.6
ENST00000374721.7
ENST00000374728.7
CDS-3UTR TCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGATCAATTACACCTTCTaGTTCTGCAGATTCATCTGT +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKINYTF*FCRFIC
Trigger: ACAGATGAATCTGCAGAATCAGAAGGTGTAATTGAT...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACACCCAGTGTAGAAACTaGCTTGTACCCCGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHTQCRN*LVPRRY
Trigger: ATACCTTCGGGGTACAAGTCAGTTTCTACACTGGGT...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCGACAGCGGAGTATCTaGTCTAATGTGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMRQRSI*SNVDFE
Trigger: TTCAAAGTCCACATTAGATCAGATACTCCGCTGTCG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTTCTTCCACATCCCCTaGAGAATAATCCTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFFFHIP*RIILFY
Trigger: ATAGAAGAGGATTATTCTTCAGGGGATGTGGAAGAA...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361599.8
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGCAATTGCTGCTACCTaGACGGTGTGTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMAIAAT*TVCISD
Trigger: ATCAGAAATACACACCGTTCAGGTAGCAGCAATTGC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR GCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACAAGTGTGATCACGGCTaGATTCCACATCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHKCDHG*IPHPGT
Trigger: TGTTCCAGGATGTGGAATGCAGCCGTGATCACACTT...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp CATGCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCAAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: HAIDKQIKVSSVSVITAASNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...TGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp ATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGGTCAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: MAISRTAASPALIRVNKVKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR GCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRAHEQT*SLSKKL
Trigger: CAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGC...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTATATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKNTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACGGAGCTGCAAGTATGTaGCATTGGAACAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHGAASM*HWNKPY
Trigger: GTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCC...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACCCTGGGTTAGAAATCTaGATTGTTCCACCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHPGLEI*IVPPWA
Trigger: AGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGG...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGTTGGCATGTCACCAGTaGCAGCTTGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRLACHQ*QLEQQP
Trigger: AGGTTGTTGTTCAAGCTGCCACTGGTGACATGCCAA...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000429130.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGAGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000488328.5
CDS-3UTR CCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATTGGTTGTTCGCTAAATaGCAAAATAGGGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNWLFAK*QNRGPP
Trigger: TGGTGGCCCCCTATTTTGCCATTTAGCGAACAACCA...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAATAACCCATGGCTGTaGTGTCTGAATTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMNNPWL*CLNYSL
Trigger: CAGGGAGTAATTCAGACACCACAGCCATGGGTTATT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR CCA 90 bp TTACAACTCGCACATGACAACATTTCCAAGTATCCCTTGTTAAATCGTTCCTACATTCAACTGTTTCCATaGTCATTTGTCCGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: LQLAHDNISKYPLLNRSYIQLFP*SFVRRK
Trigger: TTTGCGGCGGACAAATGACCATGGAAACAGTTGAAT...GTAGGAACGATTTAACAAGGGATACTTGGAAATGTTGTCATGTGCGAGTTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR CCA 90 bp TTACAACTCGCACATGACAACATTTCCAAGTATCCCTTGTTAAATCGTTCCTACGACCAAGAAGATTTTTaGCATAGCTGGGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: LQLAHDNISKYPLLNRSYDQEDF*HSWAKQ
Trigger: CTGTTTTGCCCAGCTATGCCAAAAATCTTCTTGGTC...GTAGGAACGATTTAACAAGGGATACTTGGAAATGTTGTCATGTGCGAGTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR TCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACCGACAGCGGAGTATCTaGTCTAATGTGGACTTTGAA +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHRQRSI*SNVDFE
Trigger: TTCAAAGTCCACATTAGATCAGATACTCCGCTGTCG...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTGTATTTCTGATGACTaGATAACCCATGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMCISDD*ITHGCG
Trigger: ACCACAGCCATGGGTTATTCAGTCATCAGAAATACA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR GCA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGTCAAAGACAGTTACTCTACTTTATGGCAATAAAGATCTTTGAGGGCCTTGAGGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SQRQLLYFMAIKIFEGLEVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...CTCAAGGCCCTCAAAGATCTTTATTGCCATAAAGTAGAGTAACTGTCTTTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGATATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTTATTAAGGAACACATaGTCCTTATCGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFLLRNT*SLSLLV
Trigger: CACCAAAAGCGATAAGGAGCATGTGTTCCTTAATAA...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342105.7
ENST00000463314.5
CDS-3UTR GCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGGCCATAATGGGCTTCTaGAGACAGAACTGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRAIMGF*RQNCLV
Trigger: AACAAGACAGTTCTGTCTGCAGAAGCCCATTATGGC...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000488328.5
CDS-3UTR CCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAACACTAATCCAAACTaGATTCTTAAGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILNTNPN*ILKGHT
Trigger: CGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACTCTCTTCTTCAATCTTaGGAACACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHSLLQS*EHQAHQ
Trigger: CTGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGA...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCCCAAGGTGGAACAATCCA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
CDS-3UTR CCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACGACGTCGACATTCTTTaGCAGCTTCCCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHDVDIL*QLPCFS
Trigger: TGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTC...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR TCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR GCA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: GSCKYVALEQALQILHFKSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTACCAAACACTACAAAGTaGAACCAACATGGTTCTATT +
Preference number: 4 (lower is better)
Translates to: MGAASMWHWNKPYKYCILPNTTK*NQHGSI
Trigger: AATAGAACCATGTTGGTTGCACTTTGTAGTGTTTGG...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGTTATACTTCCATCATaGTGGGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMVILPS*WDSTVS
Trigger: GGAAACAGTTGAATCCCAGCATGATGGAAGTATAAC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR GCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGTATGCTAGTTGGTACTaGCATGGTAGCAATACTAGG +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRYASWY*HGSNTR
Trigger: CCTAGTATTGCTACCATGGCAGTACCAACTAGCATA...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACCTGCATTCCACATCCTaGAACAACATTCCCAATTCA +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHLHSTS*NNIPNS
Trigger: TGAATTGGGAATGTTGTTCCAGGATGTGGAATGCAG...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACATAAGCTTCTTGTTCTaGACTTCCAGCACTGCAACT +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHISFLF*TSSTAT
Trigger: AGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTAT...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGAATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR CCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCCCAAGGTGGAACAATCCA...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
ENST00000463314.5
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACAGGTGGTTACTGTCCTaGAACAGTCATTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHRWLLS*NSHFLM
Trigger: CATCAGAAAATGACTGTTCCAGGACAGTAACCACCT...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342105.7
ENST00000463314.5
3UTR CAA 72 bp CAAAGAAAAGAAGCCACCATTCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAACTATACATGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: QRKEATILASYI*YSFKSNYTCCL
Trigger: AAGGCAGCATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCTTCTTTTCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR TCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR TCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGATAAGAGGGTCTTCGTaGAAGGATTTCTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRIRGSS*KDFSTF
Trigger: AAACGTAGAGAAATCCTTTCACGAAGACCCTCTTAT...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTTATTAAGGAACACATaGTCCTTATCGCTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLLRNT*SLSLLV
Trigger: CACCAAAAGCGATAAGGAGCATGTGTTCCTTAATAA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342105.7
ENST00000463314.5
CDS-3UTR CCA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATATACTTCCATCATGCTaGGATTCAACTGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: SCKYVALEQALQILHFKNILPSC*DSTVSM
Trigger: CATGGAAACAGTTGAATCCCAGCATGATGGAAGTAT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CCA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACAGTGACACTTATAACTaGGAAAACCTCACAGTGTTG +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHSDTYN*ENLTVL
Trigger: CAACACTGTGAGGTTTTCCCAGTTATAAGTGTCACT...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361599.8
CDS-3UTR GCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGAAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGAAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR GCA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACAGAAGCCACCATTCTTaGCAGCTATATATTGTATTC +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHRSHHS*QLYIVF
Trigger: GAATACAATATATAGCTGGCAAGAATGGTGGCTTCT...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACAGCAACTATACATGCTaGCTTCAGTTCATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHSNYTC*LQFIVK
Trigger: TTTAACTATGAACTGAAGGCAGCATGTATAGTTGCT...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR GCA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACAAAAGCAACTATACATaGTGCCTTCAGTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHKSNYT*CLQFIV
Trigger: AACTATGAACTGAAGGCAGCATGTATAGTTGCTTTT...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS TCA 90 bp CAGTGGCAGCCGCCGCAAAGGGATTTACGTAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGTGGAGACGGCGAGCCCGACCGCCGC +
Preference number: 5 (lower is better)
Translates to: QWQPPQRDLRSGPRH*LRTRGGGDGEPDRR
Trigger: GCGGCGGTCGGGCTCGCCGTCTCCACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCTACGTAAATCCCTTTGCGGCGGCTGCCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474362.5
CDS TCA 90 bp TGCTGCTACCCGCCGCAAAGGGATTTACGTAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGTGGAGACGGCGAGCCCGACCGCCGC +
Preference number: 5 (lower is better)
Translates to: CCYPPQRDLRSGPRH*LRTRGGGDGEPDRR
Trigger: GCGGCGGTCGGGCTCGCCGTCTCCACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCTACGTAAATCCCTTTGCGGCGGGTAGCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461968.5
ENST00000482633.5
ENST00000489388.5
CDS TCA 90 bp GTCATTTGTCCGCCGCAAAGGGATTTACGTAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGTGGAGACGGCGAGCCCGACCGCCGC +
Preference number: 5 (lower is better)
Translates to: VICPPQRDLRSGPRH*LRTRGGGDGEPDRR
Trigger: GCGGCGGTCGGGCTCGCCGTCTCCACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCTACGTAAATCCCTTTGCGGCGGACAAATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374726.7
ENST00000469949.6
ENST00000490460.5
ENST00000495960.5
ENST00000496626.5
CDS TCA 90 bp TTATTTATCCCGCCGCAAAGGGATTTACGTAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGTGGAGACGGCGAGCCCGACCGCCGC +
Preference number: 5 (lower is better)
Translates to: LFIPPQRDLRSGPRH*LRTRGGGDGEPDRR
Trigger: GCGGCGGTCGGGCTCGCCGTCTCCACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCTACGTAAATCCCTTTGCGGCGGGATAAATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374721.7
ENST00000429130.7
ENST00000466251.5
ENST00000482646.5
CDS-3UTR CAA 90 bp GGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCAGGTCACCAGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GHPHREMVERARARISTQVTSGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGAC...CTGGGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CAA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: CGHPHREMVERARARISTSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: CGHPHREMVERARARISTRRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
CDS-3UTR CAA 90 bp TCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTAGGAGCTCGGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SGRCSHHHSLWQSSSRSSELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...CGAGCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CAA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCATCTGTCTCTGCAATaGCTGCTACCTGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: CGHPHREMVERARARISTHLSLQ*LLPELK
Trigger: CTTTAGCTCAGGTAGCAGCAATTGCAGAGACAGATG...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGGGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: GDCANFRAMQPSPLPVAKGYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCC...CTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CAA 90 bp TCCGGGCGATGCAGCCATCACCACTCCCTGTGGCAAAGCAGCAGTAGGAGCTCGGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SGRCSHHHSLWQSSSRSSEELLN*SLLMPA
Trigger: TGCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...CGAGCTCCTACTGCTGCTTTGCCACAGGGAGTGGTGATGGCTGCATCGCCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CAA 90 bp GTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: VLLLLPAAGDCANFRAMQRRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...CTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR CAA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCAGTGTAGAAACTGACTaGTACCCCGAAGGTATGCAA +
Preference number: 5 (lower is better)
Translates to: CGHPHREMVERARARISTSVETD*YPEGMQ
Trigger: TTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGGAGCTCGGATCTGGTAAGTTGGCATGTCACCAGTGGCAGCTTGAACAACAACGTCACCAGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RSSDLVSWHVTSGSLNNNVTSGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGAC...GTTGTTGTTCAAGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CAA 90 bp CACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTCCTAGTCTAAAAGGCAGCTaGGAGGCAGAGGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: HVSFPQVHMAISRTAASPSLKGS*EAEAVV
Trigger: CACCACTGCCTCTGCCTCCAAGCTGCCTTTTAGACT...AGGAGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344351.5
ENST00000474931.5
CDS-3UTR CAA 90 bp CACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTCCTAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HVSFPQVHMAISRTAASPSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...AGGAGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CAA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 5 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR CAA 90 bp TGCGGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: CGHPHREMVERARARISTLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...GGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCAGTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: GHPHREMVERARARISTQLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...CTGGGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp TTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGAGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: FACCFFCQLLGTVQTSGRELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...TCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR CAA 90 bp CTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCCGGGCGATGCAGCCATCACTGGATTGTTCCACCTaGGGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: LLLPAAGDCANFRAMQPSLDCST*GYSNVL
Trigger: CAATACATTGCTATAGCCCAAGGTGGAACAATCCAG...TGATGGCTGCATCGCCCGGAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CAA 90 bp GGCAAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGGTGAGGGCTTTGGGCTaGTTCCCTGAAGCTTTTTAT +
Preference number: 5 (lower is better)
Translates to: GKIGGHQPDSSRPPTERKVRALG*FPEAFY
Trigger: ATAAAAAGCTTCAGGGAACAAGCCCAAAGCCCTCAC...CTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GGCCATCCCCACCGTGAGATGGTAGAAAGGGCGCGTGCAAGGATCAGCACCCAGTGTTTCCATGGTCATTaGTTTCTGGATTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: GHPHREMVERARARISTQCFHGH*FLDSFS
Trigger: GGAAAAGGAATCCAGAAACAAATGACCATGGAAACA...CTGGGTGCTGATCCTTGCACGCGCCCTTTCTACCATCTCACGGTGGGGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374728.7
CDS-3UTR CAA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCACTCGGATCTGGTAAGTaGGCATGTCACCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPLGSGK*ACHQWQ
Trigger: CTGCCACTGGTGACATGCCAACTTACCAGATCCGAG...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp ATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: IQTGFLRVTRVLPTSPHGALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...GCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LFFISLSSRLRVASSASCALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...GCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464475.1
ENST00000490460.5
ENST00000495960.5
CDS-3UTR CAA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSSISFLFWTSSTATRLSALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000464475.1
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAAAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: PNWILKGHTCPSHKSTWQSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...TTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CAA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCAAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCTGGGGACTGTGCAAACTTCAGATCTTTGAGGGCCTaGAGTTCCTCAATGAGAGTC +
Preference number: 5 (lower is better)
Translates to: ALVCVLLLLPAAGDCANFRSLRA*SSSMRV
Trigger: GACTCTCATTGAGGAACTCAAGGCCCTCAAAGATCT...GAAGTTTGCACAGTCCCCAGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR CAA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAAGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: QIKVSSVSVITAAFHILEALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CAA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VETDLYPEGMQCDPNRLIALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp ACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: TGFLRVTRVLPTSPHGNKALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...CTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: DILWQLPCFSLASALVCVSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...CACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR CAA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTAGATCTTTGAGGGCCTaGAGTTCCTCAATGAGAGTC +
Preference number: 5 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSRSLRA*SSSMRV
Trigger: GACTCTCATTGAGGAACTCAAGGCCCTCAAAGATCT...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR CAA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYLSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp ATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCCAGCAGCCATGTGACTaGGGGCAAGTTCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: IQTGFLRVTRVLPTSPHGQQPCD*GQVQFP
Trigger: AGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTG...GCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CAA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCACAGCAGCCATGTGACTaGGGGCAAGTTCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPQQPCD*GQVQFP
Trigger: AGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTG...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439705.5
CDS-3UTR CAA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCAACCAGTGGCAGTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPTSGSV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACACTGCCACTGGT...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348787.6
ENST00000374728.7
CDS-3UTR CAA 90 bp AAGAACTGCTGTGTGCCATCAGCTGATTGTGCTGCGTACTGTACAATTGTAGCAGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: KNCCVPSADCAAYCTIVAALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...TGCTACAATTGTACAGTACGCAGCACAATCAGCTGATGGCACACAGCAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CAA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: DKQIKVSSVSVITAAFHISLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HSLAASLFFISLSSRLRVSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...AACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR CAA 90 bp AAAATAGGGGGCCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCTGGATTGTTCCACCTaGGGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: KIGGHQPDSSRPPTERKSLDCST*GYSNVL
Trigger: CAATACATTGCTATAGCCCAAGGTGGAACAATCCAG...AGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGGCCCCCTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CAA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGGTCACCAGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWVTSGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGAC...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CAA 90 bp GCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCCGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: ASLFFISLSSRLRVASSARRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR CAA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACCAGTGGCAGTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: SRPPTERKSQAIMKAETLTSGSV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACACTGCCACTGGT...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348787.6
ENST00000374728.7
CDS TCA 90 bp GTTGGCATGTCACCAGTGGCAGCACTAAGCTGGCCAGACAACTCCTaGGTTCTGTTCATGCATTACAGTTTCATGACGTGTTTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: VGMSPVAALSWPDNS*VLFMHYSFMTCFPL
Trigger: AAGAGGGAAACACGTCATGAAACTGTAATGCATGAACAGAACTCAGGAGTTGTCTGGCCAGCTTAGTGCTGCCACTGGTGACATGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474931.5
ENST00000490511.1
CDS GCA 90 bp CAAGTATCCCTTGTTAAATCGTTCCTACTTCAATCCCCGATGGCATaGCAGGGCTGCTTTATTCCGAGGGACTCCTTACACATTGTGCAC +
Preference number: 5 (lower is better)
Translates to: QVSLVKSFLLQSPMA*QGCFIPRDSLHIVH
Trigger: GTGCACAATGTGTAAGGAGTCCCTCGGAATAAAGCAGCCCTGGCATGCCATCGGGGATTGAAGTAGGAACGATTTAACAAGGGATACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR CAA 90 bp CACATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGAGTCTAAAAGGCAGCTaGGAGGCAGAGGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: HMAISRTAASPALIRVNKSLKGS*EAEAVV
Trigger: CACCACTGCCTCTGCCTCCAAGCTGCCTTTTAGACT...CTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344351.5
ENST00000474931.5
CDS-3UTR CAA 90 bp CAAACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCTCGGATCTGGTAAGTaGGCATGTCACCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: QTLIQTGFLRVTRVLPTSLGSGK*ACHQWQ
Trigger: CTGCCACTGGTGACATGCCAACTTACCAGATCCGAG...ACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CAA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCAGCTGCGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 5 (lower is better)
Translates to: LFFISLSSRLRVASSASCAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...GCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490460.5
CDS-3UTR CAA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: SHVSFPQVHMAISRTAASLSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCTTCTGCCCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: ASLFFISLSSRLRVASSALSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS-3UTR CAA 90 bp CCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGCCGTGAGGGCTTTGGGCTaGTTCCCTGAAGCTTTTTAT +
Preference number: 5 (lower is better)
Translates to: PPTERKSQAIMKAETLTAVRALG*FPEAFY
Trigger: ATAAAAAGCTTCAGGGAACAAGCCCAAAGCCCTCAC...GGCTGTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCACCAGTGGCAGTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: DKQIKVSSVSVITAAFHITSGSV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACACTGCCACTGGT...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR CAA 90 bp ACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTGGCATAGCTGGGCAAGGGACTCCTTACACATaGTGCACTGAGCTAAAGCAG +
Preference number: 5 (lower is better)
Translates to: TSFLGLCGTKKIFGIAGQGTPYT*CTELKQ
Trigger: CTGCTTTAGCTCAGTGCACAATGTGTAAGGAGTCCC...TTGCCCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR CAA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAGATCTTTGAGGGCCTaGAGTTCCTCAATGAGAGTC +
Preference number: 5 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANRSLRA*SSSMRV
Trigger: GACTCTCATTGAGGAACTCAAGGCCCTCAAAGATCT...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356917.9
ENST00000439705.5
CDS-3UTR CAA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATAGATCTTTGAGGGCCTaGAGTTCCTCAATGAGAGTC +
Preference number: 5 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNRSLRA*SSSMRV
Trigger: GACTCTCATTGAGGAACTCAAGGCCCTCAAAGATCT...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTGGAAGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 5 (lower is better)
Translates to: QIKVSSVSVITAAFHILEAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...TTCCAGGATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 5 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
ENST00000490460.5
CDS-3UTR CAA 90 bp AATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: NPNWILKGHTCPSHKSTWELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...CCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANLSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAGTGAGGGCTTTGGGCTaGTTCCCTGAAGCTTTTTAT +
Preference number: 5 (lower is better)
Translates to: SRPPTERKSQAIMKAETLVRALG*FPEAFY
Trigger: ATAAAAAGCTTCAGGGAACAAGCCCAAAGCCCTCAC...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGTTCCTCTATAAGCTTCTTGTTCTGGACTTCCAGCACTGCAACTCGGCTCTCCAGTTTCCTCATTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: SSSISFLFWTSSTATRLSSFLIV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACAATGAGGAAACT...GGAGAGCCGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGAGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354759.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCAGCAGCCATGTGACTaGGGGCAAGTTCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFQQPCD*GQVQFP
Trigger: AGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTG...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000473940.5
CDS TCA 90 bp TCAGTAGGAGGCTCGATCTTACCACTAAGCTGGCCAGACAACTCCTaGGTTCTGTTCATGCATTACAGTTTCATGACGTGTTTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SVGGSILPLSWPDNS*VLFMHYSFMTCFPL
Trigger: AAGAGGGAAACACGTCATGAAACTGTAATGCATGAACAGAACTCAGGAGTTGTCTGGCCAGCTTAGTGGTAAGATCGAGCCTCCTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344351.5
ENST00000488741.5
CDS TCA 90 bp CTTGGGGCAAGTTCAGTTTCCTCATTGTATTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACTGCCATGGTAGCAATACTAGGTGGT +
Preference number: 5 (lower is better)
Translates to: LGASSVSSLYCPVLV*YMLVGTAMVAILGG
Trigger: ACCACCTAGTATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAATGAGGAAACTGAACTTGCCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000463960.5
ENST00000484283.5
CDS TCA 90 bp GGGGCAAGTTCAGTTTCCTCATCACTAAGCTGGCCAGACAACTCCTaGGTTCTGTTCATGCATTACAGTTTCATGACGTGTTTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GASSVSSSLSWPDNS*VLFMHYSFMTCFPL
Trigger: AAGAGGGAAACACGTCATGAAACTGTAATGCATGAACAGAACTCAGGAGTTGTCTGGCCAGCTTAGTGATGAGGAAACTGAACTTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468236.5
CDS GCA 90 bp CCAGTGGCAGCTGTGTCATCTCCAGTTACAGCCATAATGGGCTTCTaGAGACAGAACTGTCTTGTTTCCTCTACCACAGTTCAACATAAA +
Preference number: 5 (lower is better)
Translates to: PVAAVSSPVTAIMGF*RQNCLVSSTTVQHK
Trigger: TTTATGTTGAACTGTGGTAGAGGAAACAAGACAGTTCTGTCTGCAGAAGCCCATTATGGCTGTAACTGGAGATGACACAGCTGCCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488328.5
CDS-3UTR CAA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: RMGAASMWHWNKPYKYCISLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCAGATCTTTGAGGGCCTaGAGTTCCTCAATGAGAGTC +
Preference number: 5 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSRSLRA*SSSMRV
Trigger: GACTCTCATTGAGGAACTCAAGGCCCTCAAAGATCT...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CAA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCAGATCTTTGAGGGCCTaGAGTTCCTCAATGAGAGTC +
Preference number: 5 (lower is better)
Translates to: DKQIKVSSVSVITAAFHIRSLRA*SSSMRV
Trigger: GACTCTCATTGAGGAACTCAAGGCCCTCAAAGATCT...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CCACCAGCCGGACAGCTCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: PPAGQLQTTYRKKVSGHYLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...ATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGAGCTGTCCGGCTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp TCAGCTGAATGTGCCGACAGCGGAGTATCTGATCTAATGTGGACTTTGAAGCATGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SAECADSGVSDLMWTLKHELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...ATGCTTCAAAGTCCACATTAGATCAGATACTCCGCTGTCGGCACATTCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp TCTTTCGACGTCGACATTCTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SFDVDILWQLPCFSLASAELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...AGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464475.1
ENST00000495960.5
CDS-3UTR CAA 90 bp ATCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTGGCATAGCTGGGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: IYILPRPMWDQEDFWHSWELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...CCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR CAA 90 bp TCAGCTGAATGTGCCGACAGCGGAGTATCTGATCTAATGTGGACTTTGAAGCATCATCTGTCTCTGCAATaGCTGCTACCTGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: SAECADSGVSDLMWTLKHHLSLQ*LLPELK
Trigger: CTTTAGCTCAGGTAGCAGCAATTGCAGAGACAGATG...ATGCTTCAAAGTCCACATTAGATCAGATACTCCGCTGTCGGCACATTCAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCATCTGTCTCTGCAATaGCTGCTACCTGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: DKQIKVSSVSVITAAFHIHLSLQ*LLPELK
Trigger: CTTTAGCTCAGGTAGCAGCAATTGCAGAGACAGATG...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354759.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSLSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR CAA 90 bp TCCAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTACTGGATTGTTCCACCTaGGGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: SRPPTERKSQAIMKAETLLDCST*GYSNVL
Trigger: CAATACATTGCTATAGCCCAAGGTGGAACAATCCAG...TAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CAA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANEELLN*SLLMPA
Trigger: TGCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CAA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGCGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWRRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTAGTGTAGAAACTGACTaGTACCCCGAAGGTATGCAA +
Preference number: 5 (lower is better)
Translates to: VETDLYPEGMQCDPNRLISVETD*YPEGMQ
Trigger: TTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCTGGATTGTTCCACCTaGGGCTATAGCAACATCGGG +
Preference number: 5 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKLDCST*GYSNIG
Trigger: CCCGATGTTGCTATAGCCCAAGGTGGAACAATCCAG...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463314.5
CDS GCA 90 bp CAGGGATTGAATTTTGGCCAGTCTGAGTCTGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTGTTATACTTCCATCATGCTGGGATT +
Preference number: 5 (lower is better)
Translates to: QGLNFGQSESAHEQT*SLSKKLLYFHHAGI
Trigger: AATCCCAGCATGATGGAAGTATAACAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGCAGACTCAGACTGGCCAAAATTCAATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000337656.8
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374726.7
ENST00000374728.7
ENST00000374734.7
ENST00000427847.6
ENST00000429130.7
ENST00000439705.5
ENST00000466251.5
ENST00000469949.6
ENST00000479070.5
ENST00000482646.5
ENST00000487132.5
ENST00000489321.5
ENST00000490460.5
ENST00000495960.5
ENST00000496626.5
CDS-3UTR CAA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTACTCGGATCTGGTAAGTaGGCATGTCACCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: MGAASMWHWNKPYKYCILLGSGK*ACHQWQ
Trigger: CTGCCACTGGTGACATGCCAACTTACCAGATCCGAG...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: MGAASMWHWNKPYKYCILALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCAGATCTTTGAGGGCCTaGAGTTCCTCAATGAGAGTC +
Preference number: 5 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFRSLRA*SSSMRV
Trigger: GACTCTCATTGAGGAACTCAAGGCCCTCAAAGATCT...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CATGCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCAAGATCTTTGAGGGCCTaGAGTTCCTCAATGAGAGTC +
Preference number: 5 (lower is better)
Translates to: HAIDKQIKVSSVSVITAARSLRA*SSSMRV
Trigger: GACTCTCATTGAGGAACTCAAGGCCCTCAAAGATCT...TGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000490460.5
CDS-3UTR CAA 90 bp ATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGGTCGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 5 (lower is better)
Translates to: MAISRTAASPALIRVNKVAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
ENST00000474931.5
ENST00000490460.5
CDS-3UTR CAA 90 bp CACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTCCTCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: HVSFPQVHMAISRTAASPLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...AGGAGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp GCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: AIDKQIKVSSVSVITAAFLSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...GAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354759.7
ENST00000374721.7
ENST00000439705.5
CDS-3UTR CAA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGGGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWGYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCC...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGTCACCAGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMVTSGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGAC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CAA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTGCTCCTTATCGCTTTaGGTGCCCATACTTCGGTGG +
Preference number: 5 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFCSLSL*VPILRW
Trigger: CCACCGAAGTATGGGCACCAAAAGCGATAAGGAGCA...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342105.7
ENST00000463314.5
CDS TCA 90 bp GCTGGCCAGACAACTCCTGAGTTCTGTTCATGCATTACAGTTTCATaGCGTGTTTCCCTCTTCAAGCAGACAACCACTTCAAAAGAAATG +
Preference number: 5 (lower is better)
Translates to: AGQTTPEFCSCITVS*RVSLFKQTTTSKEM
Trigger: CATTTCTTTTGAAGTGGTTGTCTGCTTGAAGAGGGAAACACGTCATGAAACTGTAATGCATGAACAGAACTCAGGAGTTGTCTGGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344351.5
ENST00000468236.5
ENST00000474931.5
ENST00000488741.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 5 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp AGTGTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: SVETDLYPEGMQCDPNRLLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...GAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCACTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp TCACACGTGTCCTTCCCACAAGTCCACATGGCAATAAGTAGGACTGCTGCATCTAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: SHVSFPQVHMAISRTAASKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...AGATGCAGCAGTCCTACTTATTGCCATGTGGACTTGTGGGAAGGACACGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp GAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTCCAAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: ETDLYPEGMQCDPNRLIPKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...TGGAATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCATCTGTCTCTGCAATaGCTGCTACCTGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKHLSLQ*LLPELK
Trigger: CTTTAGCTCAGGTAGCAGCAATTGCAGAGACAGATG...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGCTGGATTGTTCCACCTaGGGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWLDCST*GYSNVL
Trigger: CAATACATTGCTATAGCCCAAGGTGGAACAATCCAG...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CAA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWEELLN*SLLMPA
Trigger: TGCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CAA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATGTCACCAGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SCKYVALEQALQILHFKNVTSGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACTGGTGAC...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CAA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTCGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIRRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp CTTTGGCAGCTTCCCTGTTTTTCATTAGCCTCAGCTCTCGTTTGCGTGTTGCTTCATCTGTCTCTGCAATaGCTGCTACCTATAATACAA +
Preference number: 5 (lower is better)
Translates to: LWQLPCFSLASALVCVLLHLSLQ*LLPIIQ
Trigger: TTGTATTATAGGTAGCAGCAATTGCAGAGACAGATG...AAGCAACACGCAAACGAGAGCTGAGGCTAATGAAAAACAGGGAAGCTGCCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495960.5
CDS GCA 90 bp GTTTCCTCATCTGTGTCATCTCCAGTTACAGCCATAATGGGCTTCTaGAGACAGAACTGTCTTGTTTCCTCTACCACAGTTCAACATAAA +
Preference number: 5 (lower is better)
Translates to: VSSSVSSPVTAIMGF*RQNCLVSSTTVQHK
Trigger: TTTATGTTGAACTGTGGTAGAGGAAACAAGACAGTTCTGTCTGCAGAAGCCCATTATGGCTGTAACTGGAGATGACACAGATGAGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473940.5
ENST00000487763.5
CDS-3UTR CAA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATGCTCTCGTTTGCGTGTaGCTTCTTCTGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SCKYVALEQALQILHFKNALVCV*LLLPAA
Trigger: AGCAGCTGGCAGAAGAAGCAACACGCAAACGAGAGC...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SCKYVALEQALQILHFKNSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGAGCCTCAGCTCTCGTTaGCGTGTTGCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRSLSSR*RVASSA
Trigger: GGCAGAAGAAGCAACACGCAAACGAGAGCTGAGGCT...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR CAA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGGCTGCATCTCCTGCCTaGATTAGAGTAAACAAGGTC +
Preference number: 5 (lower is better)
Translates to: GSCKYVALEQALQILHFKAASPA*IRVNKV
Trigger: GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGC...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp CAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCACATGGCAATCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: QTGFLRVTRVLPTSPHGNLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...ATTGCCATGTGGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp CAGACCACCTACAGAAAGAAAGTCTCAGGCCATTATGAAGGCCGAAACGCTAACAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: QTTYRKKVSGHYEGRNANKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...GTTAGCGTTTCGGCCTTCATAATGGCCTGAGACTTTCTTTCTGTAGGTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GTAGAAACTGACTTGTACCCCGAAGGTATGCAATGCGATCCCAACAGGCTCATTAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: VETDLYPEGMQCDPNRLIKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...AATGAGCCTGTTGGGATCGCATTGCATACCTTCGGGGTACAAGTCAGTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFLSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTGGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIGYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCC...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
CDS-3UTR CAA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTACGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: MGAASMWHWNKPYKYCILRRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTGTGAGGGCTTTGGGCTaGTTCCCTGAAGCTTTTTAT +
Preference number: 5 (lower is better)
Translates to: RMGAASMWHWNKPYKYCIVRALG*FPEAFY
Trigger: ATAAAAAGCTTCAGGGAACAAGCCCAAAGCCCTCAC...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTAGTTCAGTTTCCTCATaGTATTGCCCCGTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: RMGAASMWHWNKPYKYCISSVSS*YCPVLV
Trigger: GACTAGCACGGGGCAATACAATGAGGAAACTGAACT...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354759.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAGTTCAGTTTCCTCATaGTATTGCCCCGTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: GSCKYVALEQALQILHFKSSVSS*YCPVLV
Trigger: GACTAGCACGGGGCAATACAATGAGGAAACTGAACT...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354759.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCAGCAGCCATGTGACTaGGGGCAAGTTCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMQQPCD*GQVQFP
Trigger: AGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000429130.7
ENST00000439705.5
ENST00000473940.5
CDS-3UTR CAA 90 bp TCTACATCCTTCCTAGGCCTATGTGGGACCAAGAAGATTTTTGGCATAGCTGGGATTTCCAAGTATCCCTaGTTAAATCGTTCCTACTTC +
Preference number: 5 (lower is better)
Translates to: STSFLGLCGTKKIFGIAGISKYP*LNRSYF
Trigger: GAAGTAGGAACGATTTAACAAGGGATACTTGGAAAT...CCCAGCTATGCCAAAAATCTTCTTGGTCCCACATAGGCCTAGGAAGGATGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS-3UTR CAA 90 bp AACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTCCCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: NTNPNWILKGHTCPSHKSLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...GGACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp GACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCATTCCACATCCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: DKQIKVSSVSVITAAFHILASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...GATGTGGAATGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp CAAACACTAATCCAAACTGGATTCTTAAGGGTCACACGTGTCCTTCCCACAAGTTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: QTLIQTGFLRVTRVLPTSLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...ACTTGTGGGAAGGACACGTGTGACCCTTAAGAATCCAGTTTGGATTAGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFEELLN*SLLMPA
Trigger: TGCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000463314.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMRRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000429130.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGACGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGRRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000488328.5
CDS-3UTR CAA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACTGCTCCTTATCGCTTTaGGTGCCCATACTTCGGTGG +
Preference number: 5 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHCSLSL*VPILRW
Trigger: CCACCGAAGTATGGGCACCAAAAGCGATAAGGAGCA...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342105.7
ENST00000463314.5
CDS-3UTR CAA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACCATCTGTCTCTGCAATaGCTGCTACCATCGGGAGGT +
Preference number: 5 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHHLSLQ*LLPSGG
Trigger: ACCTCCCGATGGTAGCAGCAATTGCAGAGACAGATG...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342105.7
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCATCTGTCTCTGCAATaGCTGCTACCTGAACGGTGT +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMHLSLQ*LLPERC
Trigger: ACACCGTTCAGGTAGCAGCAATTGCAGAGACAGATG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS-3UTR CAA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp CATAGGACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: HRTLLMTHRMGAASMWHWKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...CCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGTCCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp ATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGGTCAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: MAISRTAASPALIRVNKVKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...GACCTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp CATGCTATTGACAAACAGATCAAAGTAAGCTCGGTAAGTGTGATCACGGCTGCAAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: HAIDKQIKVSSVSVITAAKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...TGCAGCCGTGATCACACTTACCGAGCTTACTTTGATCTGTTTGTCAATAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp CACATGGCAATAAGTAGGACTGCTGCATCTCCTGCCTTGATTAGAGTAAACAAGAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: HMAISRTAASPALIRVNKKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...CTTGTTTACTCTAATCAAGGCAGGAGATGCAGCAGTCCTACTTATTGCCATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344351.5
ENST00000354759.7
ENST00000356917.9
ENST00000374721.7
ENST00000439705.5
ENST00000460270.5
ENST00000473940.5
CDS-3UTR CAA 90 bp ACACTATTGATGACACATAGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: TLLMTHRMGAASMWHWNKLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...CTTGTTCCAATGCCACATACTTGCAGCTCCCATTCTATGTGTCATCAATAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMGYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
CDS-3UTR CAA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATCGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SCKYVALEQALQILHFKNRRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000463314.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGCGACGTCGACATTCTTaGGCAGCTTCCCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRRRRHS*AASLFF
Trigger: GAAAAACAGGGAAGCTGCCAAAGAATGTCGACGTCG...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000361599.8
ENST00000374728.7
ENST00000488328.5
CDS-3UTR CAA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGTGTAGAAACTGACTaGTACCCCGAAGGTATGCAA +
Preference number: 5 (lower is better)
Translates to: MGAASMWHWNKPYKYCILSVETD*YPEGMQ
Trigger: TTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACCATCTGTCTCTGCAATaGCTGCTACCTGAACGGTGT +
Preference number: 5 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHHLSLQ*LLPERC
Trigger: ACACCGTTCAGGTAGCAGCAATTGCAGAGACAGATG...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374721.7
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTTCAGTTTCCTCATCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMFSFLI*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGATGAGGAAACTGAA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429130.7
CDS-3UTR CAA 90 bp GGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: GSCKYVALEQALQILHFKLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...CTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: RMGAASMWHWNKPYKYCILHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...AATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHELKQG*NFGQSE
Trigger: CTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTC...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACCATCTGTCTCTGCAATaGCTGCTACCTGAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHHLSLQ*LLPELK
Trigger: CTTTAGCTCAGGTAGCAGCAATTGCAGAGACAGATG...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATCTCTCTTCTTCAATCTaGGGAACACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: SCKYVALEQALQILHFKNLSSSI*GTPGTS
Trigger: TGATGTGCCTGGTGTTCCCAAGATTGAAGAAGAGAG...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCTGGATTGTTCCACCTaGGGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLDCST*GYSNVL
Trigger: CAATACATTGCTATAGCCCAAGGTGGAACAATCCAG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMEELLN*SLLMPA
Trigger: TGCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342105.7
ENST00000345491.7
ENST00000361599.8
ENST00000429130.7
ENST00000463314.5
CDS-3UTR CAA 90 bp GAATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: EWELQVCGIGTSLTNIAFKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...AAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACAGTGTAGAAACTGACTaGTACCCCGAAGGTATGCAA +
Preference number: 5 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHSVETD*YPEGMQ
Trigger: TTGCATACCTTCGGGGTACAAGTCAGTTTCTACACT...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
CDS-3UTR CAA 90 bp ATGGGAGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: MGAASMWHWNKPYKYCILKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...TAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCTCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGTGCAACCAACATGGTTCTATTAAAAACTCTCTTTGACTATGGCATTCAAGGAGGTAAGATGATGCAATaGACAGCCTTATTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SATNMVLLKTLFDYGIQGGKMMQ*TALFGF
Trigger: AAAGCCAAATAAGGCTGTCAATTGCATCATCTTACC...TCCTTGAATGCCATAGTCAAAGAGAGTTTTTAATAGAACCATGTTGGTTGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361599.8
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGCCACCATTCTTGCCAGCTATATATTGTATTCCTTCAAAAGCAACTATACATGAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: SHHSCQLYIVFLQKQLYMKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...CATGTATAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAATGGTGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000429130.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp GCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATACACTTGCATAGGACACTATaGATGACACATAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: ASMWHWNKPYKYCILRIHLHRTL*MTHRMG
Trigger: TCCCATTCTATGTGTCATCAATAGTGTCCTATGCAA...GTGTATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATCTTGCCAGCTATATATaGTATTCCTTCAAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: SCKYVALEQALQILHFKNLASYI*YSFKSN
Trigger: GTTGCTTTTGAAGGAATACAATATATAGCTGGCAAG...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS-3UTR CAA 90 bp TCTTCTCATATAGGCATGTCATTAGATAGACTTTCTTTCTATTCTTTCCTGAGGAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: SSHIGMSLDRLSFYSFLRKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...CCTCAGGAAAGAATAGAAAGAAAGTCTATCTAATGACATGCCTATATGAGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000356917.9
ENST00000361599.8
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000488328.5
CDS-3UTR CAA 90 bp AGCTGCAAGTATGTGGCATTGGAACAAGCCTTACAAATATTGCATTTTAAGAATAAGAAGCCACCATTCTaGCCAGCTATATATTGTATT +
Preference number: 5 (lower is better)
Translates to: SCKYVALEQALQILHFKNKKPPF*PAIYCI
Trigger: AATACAATATATAGCTGGCAAGAATGGTGGCTTCTT...ATTCTTAAAATGCAATATTTGTAAGGCTTGTTCCAATGCCACATACTTGCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000342105.7
ENST00000344351.5
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000356917.9
ENST00000361599.8
ENST00000374721.7
ENST00000374728.7
ENST00000439705.5
ENST00000460270.5
ENST00000463314.5
ENST00000473940.5
ENST00000474362.5
ENST00000488328.5
CDS TCA 72 bp CCGCCGCAAAGGGATTTACGTAGCGGACCTCGTCACTaGTTACGGACGCGAGGAGGTGGAGACGGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: PPQRDLRSGPRH*LRTRGGGDGEP
Trigger: GGGCTCGCCGTCTCCACCTCCTCGCGTCCGTAATCAGTGACGAGGTCCGCTACGTAAATCCCTTTGCGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000374721.7
ENST00000374726.7
ENST00000429130.7
ENST00000460270.5
ENST00000461968.5
ENST00000466251.5
ENST00000469949.6
ENST00000474362.5
ENST00000482633.5
ENST00000482646.5
ENST00000489388.5
ENST00000490460.5
ENST00000495960.5
ENST00000496626.5
CDS CCA 72 bp CCAGCAGGAGTGAAGCGCCACAATCCAACAATGAAATaGAACCGGGGAGGGGCGGCGGGAAGGTGCGGGTCA +
Preference number: 6 (lower is better)
Translates to: PAGVKRHNPTMK*NRGGAAGRCGS
Trigger: TGACCCGCACCTTCCCGCCGCCCCTCCCCGGTTCCATTTCATTGTTGGATTGTGGCGCTTCACTCCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474362.5
CDS CCA 72 bp TGGCAAAGCAGCAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGCAGGCGCATGCAGGGA +
Preference number: 6 (lower is better)
Translates to: WQSSSRSSDLVS*HVTSGSRRMQG
Trigger: TCCCTGCATGCGCCTGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTGCTGCTTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344351.5
CDS CCA 72 bp TGGCAAAGCAGCAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGCCGCCGCAAAGGGATT +
Preference number: 6 (lower is better)
Translates to: WQSSSRSSDLVS*HVTSGSRRKGI
Trigger: AATCCCTTTGCGGCGGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTGCTGCTTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460270.5
ENST00000474362.5
CDS CCA 72 bp GTAACTGCACTAGAGTTACAGCTGGGGAGCCTCTTCTaGTGCCTGATCCAGCCACAGAAACCATCGGGAGGT +
Preference number: 6 (lower is better)
Translates to: VTALELQLGSLF*CLIQPQKPSGG
Trigger: ACCTCCCGATGGTTTCTGTGGCTGGATCAGGCACCAGAAGAGGCTCCCCAGCTGTAACTCTAGTGCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374711.5
CDS CCA 72 bp TGGCAAAGCAGCAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGCACTAAGCTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: WQSSSRSSDLVS*HVTSGSTKLAR
Trigger: TCTGGCCAGCTTAGTGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTGCTGCTTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474931.5
ENST00000490511.1
CDS CCA 72 bp AGTTGGCATGTCACCAGTGGCAGCAGCCATGTGACTTaGGGCAAGTTCAGTTTCCTCATCAGGCGCATGCAG +
Preference number: 6 (lower is better)
Translates to: SWHVTSGSSHVT*GKFSFLIRRMQ
Trigger: CTGCATGCGCCTGATGAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTGCCACTGGTGACATGCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488741.5
CDS CCA 72 bp AGTTGGCATGTCACCAGTGGCAGCAGCCATGTGACTTaGGGCAAGTTCAGTTTCCTCATCACTAAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: SWHVTSGSSHVT*GKFSFLITKLA
Trigger: GGCCAGCTTAGTGATGAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTGCCACTGGTGACATGCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468236.5
CDS CAA 72 bp AAGTTGGCATGTCACCAGTGGCAGCAGCCATGTGACTaGGGGCAAGTTCAGTTTCCTCATCAGGCGCATGCA +
Preference number: 6 (lower is better)
Translates to: KLACHQWQQPCD*GQVQFPHQAHA
Trigger: TGCATGCGCCTGATGAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTGCCACTGGTGACATGCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488741.5
CDS TCA 72 bp TGCACCTCACCTCAATCCATCAGCAGAACAGGGGCCTaGCAGCCAAAACCAAGCTCAACAGTTGCTAGGTCT +
Preference number: 6 (lower is better)
Translates to: CTSPQSISRTGA*QPKPSSTVARS
Trigger: AGACCTAGCAACTGTTGAGCTTGGTTTTGGCTGTCAGGCCCCTGTTCTGCTGATGGATTGAGGTGAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496626.5
CDS GCA 72 bp ACTCCCTGGACATGTATAGTTTGGCCCGAAGGTAACTaGACTAGAGTTACAGCTGGGGAGCCTCTTCTGGTG +
Preference number: 6 (lower is better)
Translates to: TPWTCIVWPEGN*TRVTAGEPLLV
Trigger: CACCAGAAGAGGCTCCCCAGCTGTAACTCTAGTGCAGTTACCTTCGGGCCAAACTATACATGTCCAGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374711.5
ENST00000374721.7
ENST00000429130.7
ENST00000472813.1
CDS GCA 72 bp TCGTTCCTACTTCAATCCCCGATGGCATGCCAGGGCTaGTTTATTCCGAGGGACTCCTTACACATTGTGCAC +
Preference number: 6 (lower is better)
Translates to: SFLLQSPMACQG*FIPRDSLHIVH
Trigger: GTGCACAATGTGTAAGGAGTCCCTCGGAATAAAGCAGCCCTGGCATGCCATCGGGGATTGAAGTAGGAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS CCA 72 bp AGTTGGCATGTCACCAGTGGCAGCAGCCATGTGACTTaGGGCAAGTTCAGTTTCCTCATTGTATTGCCCCGT +
Preference number: 6 (lower is better)
Translates to: SWHVTSGSSHVT*GKFSFLIVLPR
Trigger: ACGGGGCAATACAATGAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTGCCACTGGTGACATGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000463960.5
ENST00000484283.5
CDS CCA 72 bp GTAACTGCACTAGAGTTACAGCTGGGGAGCCTCTTCTaGTGCCTGATCCAGCCACAGAAACCTGAGCTAAAG +
Preference number: 6 (lower is better)
Translates to: VTALELQLGSLF*CLIQPQKPELK
Trigger: CTTTAGCTCAGGTTTCTGTGGCTGGATCAGGCACCAGAAGAGGCTCCCCAGCTGTAACTCTAGTGCAGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS CAA 72 bp AAGTTGGCATGTCACCAGTGGCAGCAGCCATGTGACTaGGGGCAAGTTCAGTTTCCTCATTGTATTGCCCCG +
Preference number: 6 (lower is better)
Translates to: KLACHQWQQPCD*GQVQFPHCIAP
Trigger: CGGGGCAATACAATGAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTGCCACTGGTGACATGCCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000463960.5
ENST00000484283.5
CDS CAA 90 bp GGATCTGGTAAGTTGGCATGTCACCAGTGGCAGCAGCCATGTGACTaGGGGCAAGTTCAGTTTCCTCATCTTGAACAACAACCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GSGKLACHQWQQPCD*GQVQFPHLEQQPGC
Trigger: GCAGCCAGGTTGTTGTTCAAGATGAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTGCCACTGGTGACATGCCAACTTACCAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395887.7
ENST00000429130.7
ENST00000479070.5
CDS CCA 72 bp TGGCAAAGCAGCAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCAGTGGCAGTCAAGACAATCCAATG +
Preference number: 6 (lower is better)
Translates to: WQSSSRSSDLVS*HVTSGSQDNPM
Trigger: CATTGGATTGTCTTGACTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTGCTGCTTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469517.1
CDS CAA 72 bp GTGCCTGCCTATTGCCTACCTGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAGTCTGCACATGAGCAG +
Preference number: 6 (lower is better)
Translates to: VPAYCLPELKQG*NFGQSESAHEQ
Trigger: CTGCTCATGTGCAGACTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTCAGGTAGGCAATAGGCAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482646.5
CDS CAA 90 bp CTTTCAACGGTGCCTGCCTATTGCCTACCTGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAGTCTGCACATGAGCAGACTTGCTCT +
Preference number: 6 (lower is better)
Translates to: LSTVPAYCLPELKQG*NFGQSESAHEQTCS
Trigger: AGAGCAAGTCTGCTCATGTGCAGACTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTCAGGTAGGCAATAGGCAGGCACCGTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482646.5
CDS GCA 72 bp CTTGTTAAATCGTTCCTACTTCAATCCCCGATGGCATaGCAGGGCTGCTTTATTCCGAGGGACTCCTTACAC +
Preference number: 6 (lower is better)
Translates to: LVKSFLLQSPMA*QGCFIPRDSLH
Trigger: GTGTAAGGAGTCCCTCGGAATAAAGCAGCCCTGGCATGCCATCGGGGATTGAAGTAGGAACGATTTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS CCA 72 bp TATCCCTTGTTAAATCGTTCCTACTTCAATCCCCGATaGCATGCCAGGGCTGCTTTATTCCGAGGGACTCCT +
Preference number: 6 (lower is better)
Translates to: YPLLNRSYFNPR*HARAALFRGTP
Trigger: AGGAGTCCCTCGGAATAAAGCAGCCCTGGCATGCCATCGGGGATTGAAGTAGGAACGATTTAACAAGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS CAA 72 bp CTGATCCAGCCACAGAAACCTGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAGTCTGCACATGAGCAG +
Preference number: 6 (lower is better)
Translates to: LIQPQKPELKQG*NFGQSESAHEQ
Trigger: CTGCTCATGTGCAGACTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTCAGGTTTCTGTGGCTGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374721.7
ENST00000429130.7
CDS TCA 72 bp TCACCAGTGGCAGCACTAAGCTGGCCAGACAACTCCTaGGTTCTGTTCATGCATTACAGTTTCATGACGTGT +
Preference number: 6 (lower is better)
Translates to: SPVAALSWPDNS*VLFMHYSFMTC
Trigger: ACACGTCATGAAACTGTAATGCATGAACAGAACTCAGGAGTTGTCTGGCCAGCTTAGTGCTGCCACTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474931.5
ENST00000490511.1
CDS CCA 72 bp TCAGATCCTGGGTTAGAAATCTGGATTGTTCCACCTTaGGCTATAGCAACATCGGGAGGTGGTTACTGTCCT +
Preference number: 6 (lower is better)
Translates to: SDPGLEIWIVPP*AIATSGGGYCP
Trigger: AGGACAGTAACCACCTCCCGATGTTGCTATAGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGGATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463314.5
CDS CAA 72 bp TCTCTGCAATTGCTGCTACCTGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAGTCTGCACATGAGCAG +
Preference number: 6 (lower is better)
Translates to: SLQLLLPELKQG*NFGQSESAHEQ
Trigger: CTGCTCATGTGCAGACTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTCAGGTAGCAGCAATTGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000337656.8
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374726.7
ENST00000374728.7
ENST00000374734.7
ENST00000427847.6
ENST00000439705.5
ENST00000479070.5
ENST00000487132.5
ENST00000489321.5
CDS CAA 72 bp AAGTTGGCATGTCACCAGTGGCAGCAGCCATGTGACTaGGGGCAAGTTCAGTTTCCTCATCTTGAACAACAA +
Preference number: 6 (lower is better)
Translates to: KLACHQWQQPCD*GQVQFPHLEQQ
Trigger: TTGTTGTTCAAGATGAGGAAACTGAACTTGCCCCAAGTCACATGGCTGCTGCCACTGGTGACATGCCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395887.7
ENST00000429130.7
ENST00000479070.5
CDS CAA 72 bp ATCAGATCCTGGGTTAGAAATCTGGATTGTTCCACCTaGGGCTATAGCAACATCGGGAGGTGGTTACTGTCC +
Preference number: 6 (lower is better)
Translates to: IRSWVRNLDCST*GYSNIGRWLLS
Trigger: GGACAGTAACCACCTCCCGATGTTGCTATAGCCCAAGGTGGAACAATCCAGATTTCTAACCCAGGATCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463314.5
CDS TCA 72 bp GGCTCGATCTTACCACTAAGCTGGCCAGACAACTCCTaGGTTCTGTTCATGCATTACAGTTTCATGACGTGT +
Preference number: 6 (lower is better)
Translates to: GSILPLSWPDNS*VLFMHYSFMTC
Trigger: ACACGTCATGAAACTGTAATGCATGAACAGAACTCAGGAGTTGTCTGGCCAGCTTAGTGGTAAGATCGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344351.5
ENST00000488741.5
CDS TCA 72 bp ATGTCACCAGTGGCAGTGTATTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACTGCCATGGTAGCAATA +
Preference number: 6 (lower is better)
Translates to: MSPVAVYCPVLV*YMLVGTAMVAI
Trigger: TATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACACTGCCACTGGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348787.6
ENST00000374721.7
ENST00000374728.7
ENST00000374734.7
ENST00000461968.5
ENST00000487132.5
CDS CAA 72 bp ACTCCTTACACATTGTGCACTGAGCTAAAGCAGGGATaGAATTTTGGCCAGTCTGAGTCTGCACATGAGCAG +
Preference number: 6 (lower is better)
Translates to: TPYTLCTELKQG*NFGQSESAHEQ
Trigger: CTGCTCATGTGCAGACTCAGACTGGCCAAAATTCAATCCCTGCTTTAGCTCAGTGCACAATGTGTAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS TCA 72 bp CTCTGCAATTGCTGCTACCTTTTCTTCCACATCCCCTaGAGAATAATCCTCTTCTATAGGACGCCTGAAACA +
Preference number: 6 (lower is better)
Translates to: LCNCCYLFFHIP*RIILFYRTPET
Trigger: TGTTTCAGGCGTCCTATAGAAGAGGATTATTCTTCAGGGGATGTGGAAGAAAAGGTAGCAGCAATTGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361599.8
ENST00000395887.7
ENST00000484283.5
CDS TCA 72 bp TCAGTTTCCTCATCACTAAGCTGGCCAGACAACTCCTaGGTTCTGTTCATGCATTACAGTTTCATGACGTGT +
Preference number: 6 (lower is better)
Translates to: SVSSSLSWPDNS*VLFMHYSFMTC
Trigger: ACACGTCATGAAACTGTAATGCATGAACAGAACTCAGGAGTTGTCTGGCCAGCTTAGTGATGAGGAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468236.5
CDS TCA 72 bp ACAACTCCTGAGTTCTGTTCATGCATTACAGTTTCATaGCGTGTTTCCCTCTTCAAGCAGACAACCACTTCA +
Preference number: 6 (lower is better)
Translates to: TTPEFCSCITVS*RVSLFKQTTTS
Trigger: TGAAGTGGTTGTCTGCTTGAAGAGGGAAACACGTCATGAAACTGTAATGCATGAACAGAACTCAGGAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344351.5
ENST00000468236.5
ENST00000474931.5
ENST00000488741.5
ENST00000490511.1
CDS TCA 72 bp AGTTCAGTTTCCTCATTGTATTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACTGCCATGGTAGCAATA +
Preference number: 6 (lower is better)
Translates to: SSVSSLYCPVLV*YMLVGTAMVAI
Trigger: TATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAATGAGGAAACTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354759.7
ENST00000439705.5
ENST00000463960.5
ENST00000484283.5
CDS GCA 72 bp AATTTTGGCCAGTCTGAGTCTGCACATGAGCAGACTTaGTCTCTGTCAAAGAAGCTGTTATACTTCCATCAT +
Preference number: 6 (lower is better)
Translates to: NFGQSESAHEQT*SLSKKLLYFHH
Trigger: ATGATGGAAGTATAACAGCTTCTTTGACAGAGAGCAAGTCTGCTCATGTGCAGACTCAGACTGGCCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000337656.8
ENST00000345491.7
ENST00000348787.6
ENST00000354759.7
ENST00000374721.7
ENST00000374726.7
ENST00000374728.7
ENST00000374734.7
ENST00000427847.6
ENST00000429130.7
ENST00000439705.5
ENST00000466251.5
ENST00000469949.6
ENST00000479070.5
ENST00000482646.5
ENST00000487132.5
ENST00000489321.5
ENST00000490460.5
ENST00000495960.5
ENST00000496626.5
CDS GCA 72 bp TTGCTCTCTGTCAAAGAAGCTGTTATACTTCCATCATaGTGGGATTCAACTGTTTCCATGGTCATTTGTCCG +
Preference number: 6 (lower is better)
Translates to: LLSVKEAVILPS*WDSTVSMVICP
Trigger: CGGACAAATGACCATGGAAACAGTTGAATCCCAGCATGATGGAAGTATAACAGCTTCTTTGACAGAGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374726.7
ENST00000469949.6
ENST00000490460.5
ENST00000495960.5
ENST00000496626.5
CDS CAA 90 bp AAAGAAAATTTACAACTCGCACATGACAACATTTCCAAGTATCCCTaGTTAAATCGTTCCTACTTCAATCCCCGATGGCATGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: KENLQLAHDNISKYP*LNRSYFNPRWHARA
Trigger: AGCCCTGGCATGCCATCGGGGATTGAAGTAGGAACGATTTAACAAGGGATACTTGGAAATGTTGTCATGTGCGAGTTGTAAATTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS CAA 72 bp TTACAACTCGCACATGACAACATTTCCAAGTATCCCTaGTTAAATCGTTCCTACTTCAATCCCCGATGGCAT +
Preference number: 6 (lower is better)
Translates to: LQLAHDNISKYP*LNRSYFNPRWH
Trigger: ATGCCATCGGGGATTGAAGTAGGAACGATTTAACAAGGGATACTTGGAAATGTTGTCATGTGCGAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469949.6
CDS GCA 72 bp TTGCTCTCTGTCAAAGAAGCTGTTATACTTCCATCATaGTGGGATTCAACTGTTTCCATGGTCATTTGTCTT +
Preference number: 6 (lower is better)
Translates to: LLSVKEAVILPS*WDSTVSMVICL
Trigger: AAGACAAATGACCATGGAAACAGTTGAATCCCAGCATGATGGAAGTATAACAGCTTCTTTGACAGAGAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000337656.8
ENST00000345491.7
ENST00000354759.7
ENST00000374721.7
ENST00000374734.7
ENST00000427847.6
ENST00000429130.7
ENST00000439705.5
ENST00000466251.5
ENST00000479070.5
ENST00000482646.5
CDS GCA 72 bp TTGCTCTCTGTCAAAGAAGCTGTTATACTTCCATCATaGTGGGATTCAACTGTTTCCATGGTCATTTGTTTC +
Preference number: 6 (lower is better)
Translates to: LLSVKEAVILPS*WDSTVSMVICF
Trigger: GAAACAAATGACCATGGAAACAGTTGAATCCCAGCATGATGGAAGTATAACAGCTTCTTTGACAGAGAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374728.7
ENST00000487132.5
ENST00000489321.5
CDS CAA 90 bp AATCAATTACACCTTCTGATTCTGCAGATTCATCTGTCTCTGCAATaGCTGCTACCTATAATACAAGATTTTCATCGGGAGGTGGTTACT +
Preference number: 6 (lower is better)
Translates to: NQLHLLILQIHLSLQ*LLPIIQDFHREVVT
Trigger: AGTAACCACCTCCCGATGAAAATCTTGTATTATAGGTAGCAGCAATTGCAGAGACAGATGAATCTGCAGAATCAGAAGGTGTAATTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495301.1