RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CREG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000175874

Ensembl transcript IDs: ENST00000324768.6, ENST00000486966.1, ENST00000495455.5

Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTCCCTGTTCACCCTCTCTCATTCTGCTGCAGGGATGGCAGGGCTaGTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTCTG +
Preference number: 1 (lower is better)
Translates to: VPCSPSLILLQGWQG*YEPFNKETVVNSCL
Trigger: CAGACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCCCTGCAGCAGAATGAGAGAGGGTGAACAGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 90 bp CTCAAATCTAGCATAGAGTTCCCTGTTCACCCTCTCTCATTCTGCTaGAGGGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAG +
Preference number: 1 (lower is better)
Translates to: LKSSIEFPVHPLSFC*RDGRAAMNPSTKRQ
Trigger: CTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCCCTGCAGCAGAATGAGAGAGGGTGAACAGGGAACTCTATGCTAGATTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 90 bp CACACAGTCCTCCACCCTCACCCTAAAAACAATATTGTGACTGCGTaGTGCACAGTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCA +
Preference number: 1 (lower is better)
Translates to: HTVLHPHPKNNIVTA*CTVSCFVVTVNLEP
Trigger: TGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGACTGTGCATCACGCAGTCACAATATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 90 bp AATCTCAAATCTAGCATAGAGTTCCCTGTTCACCCTCTCTCATTCTaGTGCAGGGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGA +
Preference number: 1 (lower is better)
Translates to: NLKSSIEFPVHPLSF*CRDGRAAMNPSTKR
Trigger: TCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCCCTGCAGCAGAATGAGAGAGGGTGAACAGGGAACTCTATGCTAGATTTGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 90 bp TTTTTAAGAGACAAAGTCTCACTCTATCACTCAAGTGTGGTGGCATaGTCACAGCTCAGGAGGTCAAACTCCTGGCCTCAAAGCAATCCT +
Preference number: 1 (lower is better)
Translates to: FLRDKVSLYHSSVVA*SQLRRSNSWPQSNP
Trigger: AGGATTGCTTTGAGGCCAGGAGTTTGACCTCCTGAGCTGTGATCATGCCACCACACTTGAGTGATAGAGTGAGACTTTGTCTCTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 90 bp CCTTCAACAAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTaGAAAGGTTTTCATTTAAGTGCAAACACCAAGGACTTTCTTCTC +
Preference number: 1 (lower is better)
Translates to: PSTKRQWSIAVWLHH*KGFHLSANTKDFLL
Trigger: GAGAAGAAAGTCCTTGGTGTTTGCACTTAAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTTGTTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 90 bp TATGTAAATGGAATCATACAGTGTGCAAACTTTTATGATTGGCTTTaGTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCC +
Preference number: 1 (lower is better)
Translates to: YVNGIIQCANFYDWL*SLSTILWNSSQWLP
Trigger: GGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAAAGCCAATCATAAAAGTTTGCACACTGTATGATTCCATTTACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 90 bp TTTGGTCAAGATACTGAATATGTCCATCACCACAAGGATCTCTTGTaGTATCCTTTTATAGTTATGCCCAACTCTCTTGTTCTCCCCACT +
Preference number: 1 (lower is better)
Translates to: FGQDTEYVHHHKDLL*YPFIVMPNSLVLPT
Trigger: AGTGGGGAGAACAAGAGAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACATATTCAGTATCTTGACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 90 bp GGCCTATTTCTAGATTCCCTATTCTGTTCCATCAATGTGTTTCTATaGCTCCACCAAATACCACACTTCTTGAATACTGTAGCTACATCA +
Preference number: 1 (lower is better)
Translates to: GLFLDSLFCSINVFL*LHQIPHFLNTVATS
Trigger: TGATGTAGCTACAGTATTCAAGAAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAATCTAGAAATAGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 90 bp TGCACAAGTTTTTGTGTGAACCTCTTTTCATTTCTCTTGTATAAATaGCCAGGAGCAATTGAGGGTCAGTATGGCAGTTGTATGTTTAGT +
Preference number: 1 (lower is better)
Translates to: CTSFCVNLFSFLLYK*PGAIEGQYGSCMFS
Trigger: ACTAAACATACAACTGCCATACTGACCCTCAATTGCTCCTGGGCATTTATACAAGAGAAATGAAAAGAGGTTCACACAAAAACTTGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 90 bp TTTGATAGGAATTGCATTAAACCTAGAGATGGAGATGGGGAGAACTaGTATCTTTACTGTTTGTATCTTCCAATCCAAGAACATGGTATC +
Preference number: 1 (lower is better)
Translates to: FDRNCIKPRDGDGEN*YLYCLYLPIQEHGI
Trigger: GATACCATGTTCTTGGATTGGAAGATACAAACAGTAAAGATATCAGTTCTCCCCATCTCCATCTCTAGGTTTAATGCAATTCCTATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 90 bp TACAATATCCCAACCAGGATTTTCACATTGATTTGGTCAAGATACTaGATATGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTAT +
Preference number: 1 (lower is better)
Translates to: YNIPTRIFTLIWSRY*ICPSPQGSLVLSFY
Trigger: ATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACATATTCAGTATCTTGACCAAATCAATGTGAAAATCCTGGTTGGGATATTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTCACCCTCTCTCATTCTaGTGCAGGGATGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSHPLSF*CRDGRA
Trigger: AGCCCTGCCATCCCTGCAGCAGAATGAGAGAGGGTG...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR TCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATATGGCAGGGCTGCTATaGACCCTTCAACAAAGAGAC +
Preference number: 2 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNMAGLL*TLQQRD
Trigger: GTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCAT...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCAAGAGAGGGGAACCCTTaGCAGAAGTATGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAREGNP*QKYEQQ
Trigger: CTGCTGCTCATACTTCTGGCAAGGGTTCCCCTCTCT...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTCACTCCACCTGTGTCTaGAGTGAGCTGTCTGGGATG +
Preference number: 2 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSHSTCV*SELSGM
Trigger: CATCCCAGACAGCTCACTGCAGACACAGGTGGAGTG...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR TCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGCCCCTGTTCATGCATaGGAGAGGGGAACCCTTGCC +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLAPVHA*ERGTLA
Trigger: GGCAAGGGTTCCCCTCTCTCATGCATGAACAGGGGC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCCCTCTCTCATTCTGCTaGAGGGATGGCAGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLPLSFC*RDGRAA
Trigger: AGCAGCCCTGCCATCCCTGCAGCAGAATGAGAGAGG...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTTGGTGGGAGAAAAGCTaGATTCTAGCCAGTATGACC +
Preference number: 2 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSWWEKS*ILASMT
Trigger: GGTCATACTGGCTAGAATGCAGCTTTTCTCCCACCA...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTGGATGCCCCTGTTCATaGATGAGAGAGGGGAACCCT +
Preference number: 2 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLGCPCS*MREGNP
Trigger: AGGGTTCCCCTCTCTCATGCATGAACAGGGGCATCC...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTGTCCTGAGACCTTGTTaGACTCACATACTAGTTCCA +
Preference number: 2 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSVLRPC*THILVP
Trigger: TGGAACTAGTATGTGAGTGCAACAAGGTCTCAGGAC...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCCTCCCCACTCCTCCCTaGCAACCCCTAATCTATTCT +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLLPTPP*QPLIYS
Trigger: AGAATAGATTAGGGGTTGCCAGGGAGGAGTGGGGAG...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CAA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTaGGCAGAGCAAGCAACAAAGATACTCTCACAATACAAAGCAATC +
Preference number: 2 (lower is better)
Translates to: VSCFVVTVNLEPRLH*AEQATKILSQYKAI
Trigger: GATTGCTTTGTATTGTGAGAGTATCTTTGTTGCTTGCTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR TCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCATCGATGAGTCTGGATTaGATACAATGGAATAAAGAC +
Preference number: 2 (lower is better)
Translates to: YKRKPSQGTLSARQDQEASMSLD*IQWNKD
Trigger: GTCTTTATTCCATTGTATTCAATCCAGACTCATCGA...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTGAAAGACAGAAAACTTaGGACAGCTCAACCCTTTAT +
Preference number: 2 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSERQKT*DSSTLY
Trigger: ATAAAGGGTTGAGCTGTCCCAAGTTTTCTGTCTTTC...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCTTTTCTCCCAGTATGTaGCCTGTCTTCTCGGCCTTT +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLFSPSM*PVFSAF
Trigger: AAAGGCCGAGAAGACAGGCCACATACTGGGAGAAAA...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCCATAGAGAAGGGCTATaGACAAAGCACCCTATGTTC +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLHREGL*TKHPMF
Trigger: GAACATAGGGTGCTTTGTGCATAGCCCTTCTCTATG...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCATCAGTGGTTATGAATaGCATCCACTGGGCAAAGTC +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLISGYE*HPLGKV
Trigger: GACTTTGCCCAGTGGATGCCATTCATAACCACTGAT...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR TCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCTTGACTTTTGTATGCTaGTCTTGTGTCCTGAGACCT +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLLTFVC*SCVLRP
Trigger: AGGTCTCAGGACACAAGATCAGCATACAAAAGTCAA...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCAAACAATATTGTGACTaGGTGATGCACAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLKQYCD*VMHSQL
Trigger: CAGCTGACTGTGCATCACGCAGTCACAATATTGTTT...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGCTTCTTATTTTGGATaGCCCTGTTCATGCATGAGA +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLASYFG*PCSCMR
Trigger: TCTCATGCATGAACAGGGGCATCCAAAATAAGAAGC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCTTGCTGAAACACACTTaGCTGAATGGAGACCATCAA +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLLLKHT*LNGDHQ
Trigger: TTGATGGTCTCCATTCAGGCAAGTGTGTTTCAGCAA...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTATGAATGGCATCCACTaGGCAAAGTCCTTTGAAGCA +
Preference number: 2 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLMNGIH*AKSFEA
Trigger: TGCTTCAAAGGACTTTGCCCAGTGGATGCCATTCAT...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTGGAAGTATTTCACTTTaGAGTGATTGCAAATGGTAT +
Preference number: 2 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSGSISL*SDCKWY
Trigger: ATACCATTTGCAATCACTCCAAAGTGAAATACTTCC...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTAGTATCTGTGTGAGTTaGAGATCTGCAAATGACCAC +
Preference number: 2 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLSICVS*RSANDH
Trigger: GTGGTCATTTGCAGATCTCCAACTCACACAGATACT...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGCAAACTTTTATGATTaGCTTTGCTCACTCAGCACA +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLANFYD*LCSLST
Trigger: TGTGCTGAGTGAGCAAAGCCAATCATAAAAGTTTGC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CAA 90 bp GAACATTCATGCACAAGTTTTTGTGTGAACCTCTTTTCATTTCTCTaGTATAAATGCCCAGGAGCAATTGAGGGTCAGTATGGCAGTTGT +
Preference number: 2 (lower is better)
Translates to: EHSCTSFCVNLFSFL*YKCPGAIEGQYGSC
Trigger: ACAACTGCCATACTGACCCTCAATTGCTCCTGGGCATTTATACAAGAGAAATGAAAAGAGGTTCACACAAAAACTTGTGCATGAATGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCTTTCATGCGCTTATTTaGCATTTTTATATCCTCTGC +
Preference number: 2 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLFHALI*HFYILC
Trigger: GCAGAGGATATAAAAATGGCAAATAAGCGCATGAAA...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTGTTTTCATGTTATGGTaGGAGAAAAGCTGCATTCTA +
Preference number: 2 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLVFMLW*EKSCIL
Trigger: TAGAATGCAGCTTTTCTCCCACCATAACATGAAAAC...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR GCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTAGGTTTTCATTTAAGTaGAAACACCAAGGACTTTCT +
Preference number: 2 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLRFSFK*KHQGLS
Trigger: AGAAAGTCCTTGGTGTTTGCACTTAAATGAAAACCT...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 72 bp AACTGGATGTCTTGTAGGAACCACTCCACCTGTGTCTaGAGTGAGCTGTCTGGGATGTGGACTCAGCCCCTC +
Preference number: 3 (lower is better)
Translates to: NWMSCRNHSTCV*SELSGMWTQPL
Trigger: GAGGGGCTGAGTCCACATCCCAGACAGCTCACTGCAGACACAGGTGGAGTGGTTCCTACAAGACATCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 72 bp AGCATAGAGTTCCCTGTTCACCCTCTCTCATTCTGCTaGAGGGATGGCAGGGCTGCTATGAACCCTTCAACA +
Preference number: 3 (lower is better)
Translates to: SIEFPVHPLSFC*RDGRAAMNPST
Trigger: TGTTGAAGGGTTCATAGCAGCCCTGCCATCCCTGCAGCAGAATGAGAGAGGGTGAACAGGGAACTCTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 72 bp TCTAGCATAGAGTTCCCTGTTCACCCTCTCTCATTCTaGTGCAGGGATGGCAGGGCTGCTATGAACCCTTCA +
Preference number: 3 (lower is better)
Translates to: SSIEFPVHPLSF*CRDGRAAMNPS
Trigger: TGAAGGGTTCATAGCAGCCCTGCCATCCCTGCAGCAGAATGAGAGAGGGTGAACAGGGAACTCTATGCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 72 bp TCACCCTCTCTCATTCTGCTGCAGGGATGGCAGGGCTaGTATGAACCCTTCAACAAAGAGACAGTGGTCAAT +
Preference number: 3 (lower is better)
Translates to: SPSLILLQGWQG*YEPFNKETVVN
Trigger: ATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCCCTGCAGCAGAATGAGAGAGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 72 bp CTCCACCCTCACCCTAAAAACAATATTGTGACTGCGTaGTGCACAGTCAGCTGCTTCGTGGTCACAGTGAAC +
Preference number: 3 (lower is better)
Translates to: LHPHPKNNIVTA*CTVSCFVVTVN
Trigger: GTTCACTGTGACCACGAAGCAGCTGACTGTGCATCACGCAGTCACAATATTGTTTTTAGGGTGAGGGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 72 bp ACACAGTCCTCCACCCTCACCCTAAAAACAATATTGTaGCTGCGTGATGCACAGTCAGCTGCTTCGTGGTCA +
Preference number: 3 (lower is better)
Translates to: TQSSTLTLKTIL*LRDAQSAASWS
Trigger: TGACCACGAAGCAGCTGACTGTGCATCACGCAGTCACAATATTGTTTTTAGGGTGAGGGTGGAGGACTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CAA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTGAACCAAGACTGCATTaGGCAGAGCAAGCAACAAAG +
Preference number: 3 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSEPRLH*AEQATK
Trigger: CTTTGTTGCTTGCTCTGCCAAATGCAGTCTTGGTTC...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CAA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTGGAGAGCTTCTTATTTaGGATGCCCCTGTTCATGCA +
Preference number: 3 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSGELLI*DAPVHA
Trigger: TGCATGAACAGGGGCATCCAAAATAAGAAGCTCTCC...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 72 bp GTGGCTGTTCCATTTTCTATTCCCACCACTAGTGTATaGCTGACCCGGTTTATCTGCATCCTTGTCAGCGTT +
Preference number: 3 (lower is better)
Translates to: VAVPFSIPTTSV*LTRFICILVSV
Trigger: AACGCTGACAAGGATGCAGATAAACCGGGTCAGTCATACACTAGTGGTGGGAATAGAAAATGGAACAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 72 bp CTGTTCCATTTTCTATTCCCACCACTAGTGTATGACTaGCCCGGTTTATCTGCATCCTTGTCAGCGTTTGGT +
Preference number: 3 (lower is better)
Translates to: LFHFLFPPLVYD*PGLSASLSAFG
Trigger: ACCAAACGCTGACAAGGATGCAGATAAACCGGGTCAGTCATACACTAGTGGTGGGAATAGAAAATGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 72 bp AAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTaGAAAGGTTTTCATTTAAGTGCAAACACCAAGGAC +
Preference number: 3 (lower is better)
Translates to: KRQWSIAVWLHH*KGFHLSANTKD
Trigger: GTCCTTGGTGTTTGCACTTAAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 72 bp GGAATCATACAGTGTGCAAACTTTTATGATTGGCTTTaGTCACTCAGCACAATTCTCTGGAATTCATCCCAG +
Preference number: 3 (lower is better)
Translates to: GIIQCANFYDWL*SLSTILWNSSQ
Trigger: CTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAAAGCCAATCATAAAAGTTTGCACACTGTATGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR-3UTR CAA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGTAAAAGAAAATCAGTaGAGCATATTTGTGTGGGCC +
Preference number: 3 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLVKENQ*SIFVWA
Trigger: GGCCCACACAAATATGCTCAACTGATTTTCTTTTAC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 72 bp CCAACCAGGATTTTCACATTGATTTGGTCAAGATACTaGATATGTCCATCACCACAAGGATCTCTTGTGCTA +
Preference number: 3 (lower is better)
Translates to: PTRIFTLIWSRY*ICPSPQGSLVL
Trigger: TAGCACAAGAGATCCTTGTGGTGATGGACATATTCAGTATCTTGACCAAATCAATGTGAAAATCCTGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR GCA 72 bp TTTTGTGTGAACCTCTTTTCATTTCTCTTGTATAAATaGCCAGGAGCAATTGAGGGTCAGTATGGCAGTTGT +
Preference number: 3 (lower is better)
Translates to: FCVNLFSFLLYK*PGAIEGQYGSC
Trigger: ACAACTGCCATACTGACCCTCAATTGCTCCTGGGCATTTATACAAGAGAAATGAAAAGAGGTTCACACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 72 bp AACTACAGTACAATATCCCAACCAGGATTTTCACATTaGTTTGGTCAAGATACTGAATATGTCCATCACCAC +
Preference number: 3 (lower is better)
Translates to: NYSTISQPGFSH*FGQDTEYVHHH
Trigger: GTGGTGATGGACATATTCAGTATCTTGACCAAATCAATGTGAAAATCCTGGTTGGGATATTGTACTGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CCA 72 bp GTAAATGGAATCATACAGTGTGCAAACTTTTATGATTaGCTTTGCTCACTCAGCACAATTCTCTGGAATTCA +
Preference number: 3 (lower is better)
Translates to: VNGIIQCANFYD*LCSLSTILWNS
Trigger: TGAATTCCAGAGAATTGTGCTGAGTGAGCAAAGCCAATCATAAAAGTTTGCACACTGTATGATTCCATTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR TCA 72 bp TTATGTAAATGGAATCATACAGTGTGCAAACTTTTATaGTTGGCTTTGCTCACTCAGCACAATTCTCTGGAA +
Preference number: 3 (lower is better)
Translates to: LCKWNHTVCKLL*LALLTQHNSLE
Trigger: TTCCAGAGAATTGTGCTGAGTGAGCAAAGCCAATCATAAAAGTTTGCACACTGTATGATTCCATTTACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CCA 72 bp TTAGAAATCACTACTGTTAGGAACTCTTTTGAGGACTaGCTTATGACAAATAAAGAATTCTCTGCATCTTAC +
Preference number: 3 (lower is better)
Translates to: LEITTVRNSFED*LMTNKEFSASY
Trigger: GTAAGATGCAGAGAATTCTTTATTTGTCATAAGCCAGTCCTCAAAAGAGTTCCTAACAGTAGTGATTTCTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CCA 72 bp TTAACAAATGAAATGCTGTCTCTTTGTACTAGGTTTTaGCTTATAGCTCAGTTCCTCATTTTATTAGGGACT +
Preference number: 3 (lower is better)
Translates to: LTNEMLSLCTRF*LIAQFLILLGT
Trigger: AGTCCCTAATAAAATGAGGAACTGAGCTATAAGCCAAAACCTAGTACAAAGAGACAGCATTTCATTTGTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCGTCCACCTCGTTGGTaGCGGCCCAAGACACGGAGC +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNRPPRW*RPKTRS
Trigger: GCTCCGTGTCTTGGGCCGTCACCAACGAGGTGGACG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGCTTCTGTTGAGGGCCTaGCCCAGGGCCGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAELLLRA*PRAGQA
Trigger: TGCCTGCCCGGCCCTGGGCCAGGCCCTCAACAGAAG...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGGGGACAGCAGGGCGCTaGAGCACAGCAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAEGTAGR*STAARR
Trigger: TCTCCTGGCTGCTGTGCTGCAGCGCCCTGCTGTCCC...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGGCAGCCCCAGACGCTaGCATGGGCCAGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLGSPRR*HGPGSG
Trigger: CCCGCTCCCTGGCCCATGCCAGCGTCTGGGGCTGCC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCACCTGTGTCTGCAGTaGGCTGTCTGGGATGTGGAC +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNHLCLQ*AVWDVD
Trigger: GTCCACATCCCAGACAGCTCACTGCAGACACAGGTG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCAGCGGGGAAGCTTTGCTaGCAGATGCTGCCCGAATCC +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAAGKLC*QMLPES
Trigger: GGATTCGGGCAGCATCTGGCAGCAAAGCTTCCCCGC...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTCCCCAGACGCTGGCATaGGCCAGGGAGCGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: KETVVNSCLAASLKRFSFPQTLA*ARERAV
Trigger: CACCGCCCGCTCCCTGGCCCATGCCAGCGTCTGGGG...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCACCTCTCTCATTCTGCTaGAGGGATGGCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAPLSFC*RDGRAA
Trigger: AGCAGCCCTGCCATCCCTGCAGCAGAATGAGAGAGG...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCACTCCACCTGTGTCTaGAGTGAGCTGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNHSTCV*SELSGM
Trigger: CATCCCAGACAGCTCACTGCAGACACAGGTGGAGTG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGGCAGAACTCCCCTTCTaGTTCTGGCAGCATCAGCGA +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAEAELPF*FWQHQR
Trigger: TCGCTGATGCTGCCAGAATCAGAAGGGGAGTTCTGC...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGCATCCCTGGGTGCCTTaGAAACATGGCTTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAEHPWVP*KHGLLG
Trigger: GCCAAGCAAGCCATGTTTTCAAGGCACCCAGGGATG...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCCCACCTCAGCCTCTTaGGTAGCTAGAACTACAGGT +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNPTSAS*VARTTG
Trigger: ACCTGTAGTTCTAGCTACTCAAGAGGCTGAGGTGGG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTTTTGCTGCCAGATGCTaGCCGAATCCTCTAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GWQGCYEPFNKETVVNSCFAARC*PNPLAA
Trigger: CGCTGCTAGAGGATTCGGGCAGCATCTGGCAGCAAA...ACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCAGGATGCCCCTGTTCATaGATGAGAGAGGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAGCPCS*MREGNP
Trigger: AGGGTTCCCCTCTCTCATGCATGAACAGGGGCATCC...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTCCTTGGATCTTCTTGTaGGTGGACACGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSPWIFL*VDTVAR
Trigger: CCTGGCCACCGTGTCCACCCACAAGAAGATCCAAGG...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCCAGTGAGCGTTAACTaGACACATCGGGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNPVSVN*THRGSS
Trigger: GGAAGATCCCCGATGTGTCCAGTTAACGCTCACTGG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCAAGCTTTGCTGCCAGATaGTGCCCGAATCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEASFAAR*CPNPLA
Trigger: TGCTAGAGGATTCGGGCAGCATCTGGCAGCAAAGCT...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCCAAATGGCAGTCCTTaGATCTTCTTGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNPNGSP*IFLWVD
Trigger: GTCCACCCACAAGAAGATCCAAGGACTGCCATTTGG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCACCACCACGGGGTCCTTaGCTGTCATGTAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAPPRGP*LSCRRK
Trigger: CTTTCTTCTACATGACAGCCAAGGACCCCGTGGTGG...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGGCATCAGCGAGGCCATaGGGTTCTTCATCAGATCAG +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAEASARP*GSSSDQ
Trigger: CTGATCTGATGAAGAACCCCATGGCCTCGCTGATGC...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCAGACACTGCGATCATCTaGCCAGTGAGCGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEADTAII*PVSVNW
Trigger: CCAGTTAACGCTCACTGGCCAGATGATCGCAGTGTC...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTATTCTGCTGCAGGGATaGCAGGGCTGCTATGAACCC +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSILLQG*QGCYEP
Trigger: GGGTTCATAGCAGCCCTGCCATCCCTGCAGCAGAAT...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTGGGCCGGGCAGGCAGTaGGCCCTCAGTTACTGGCTT +
Preference number: 4 (lower is better)
Translates to: KETVVNSCLAASLKRFSFGPGRQ*ALSYWL
Trigger: AAGCCAGTAACTGAGGGCCCACTGCCTGCCCGGCCC...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTCTCCCCACTCCTCCCTaGCAACCCCTAATCTATTCT +
Preference number: 4 (lower is better)
Translates to: GWQGCYEPFNKETVVNSCLPTPP*QPLIYS
Trigger: AGAATAGATTAGGGGTTGCCAGGGAGGAGTGGGGAG...ACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTCGATCATCTGGCCAGTaGGCGTTAACTGGACACATC +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSRSSGQ*ALTGHI
Trigger: GATGTGTCCAGTTAACGCTCACTGGCCAGATGATCG...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGAGGCGGGGAAGCTTTaGTGCCAGATGCTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLEAGKL*CQMLPE
Trigger: TTCGGGCAGCATCTGGCAGCAAAGCTTCCCCGCCTC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCATTCCTCATCCCTGGGTaGCTTGAAAACATGGCTTGC +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAFLIPG*LENMAC
Trigger: GCAAGCCATGTTTTCAAGGCACCCAGGGATGAGGAA...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGCAGGGATGGCAGGGCTaGTATGAACCCTTCAACAAA +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAEQGWQG*YEPFNK
Trigger: TTTGTTGAAGGGTTCATAGCAGCCCTGCCATCCCTG...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATTGGTGGGAGAAAAGCTaGATTCTAGCCAGTATGACC +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNWWEKS*ILASMT
Trigger: GGTCATACTGGCTAGAATGCAGCTTTTCTCCCACCA...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCCTTCTGTAACGTGCTaGCTTTACTTTCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNPSVTC*LYFPSF
Trigger: GAAGCTGGGAAAGTAAAGGCAGCACGTTACAGAAGG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTTGCGCGTCCTCCTTGTaGGCAGAGGCGGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: KETVVNSCLAASLKRFSFCASSL*AEAGKL
Trigger: AAGCTTCCCCGCCTCTGCCCACAAGGAGGACGCGCA...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGAATATTGTGACTGCGTaGTGCACAGTCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAENIVTA*CTVSCF
Trigger: GAAGCAGCTGACTGTGCATCACGCAGTCACAATATT...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTGGATCTTCTTGTGGGTaGACACGGTGGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLGSSCG*TRWPGS
Trigger: GCTGCCTGGCCACCGTGTCCACCCACAAGAAGATCC...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTTTTTCTCCCAGTATGTaGCCTGTCTTCTCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GWQGCYEPFNKETVVNSCFSPSM*PVFSAF
Trigger: AAAGGCCGAGAAGACAGGCCACATACTGGGAGAAAA...ACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCCCAGTTTTCCCCAATaGCACATCTTGCTAAACTAC +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNPSFPQ*HILLNY
Trigger: GTAGTTTAGCAAGATGTGCCATTGGGGAAAACTGGG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATTCTATCACTCAAGTGTaGTGGCATGATCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNSITQV*WHDHSS
Trigger: TGAGCTGTGATCATGCCACCACACTTGAGTGATAGA...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTATTCATCAGTGGTTATaGATGGCATCCACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GWQGCYEPFNKETVVNSCIHQWL*MASTGQ
Trigger: TTGCCCAGTGGATGCCATTCATAACCACTGATGAAT...ACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATAAACAATATTGTGACTaGGTGATGCACAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNKQYCD*VMHSQL
Trigger: CAGCTGACTGTGCATCACGCAGTCACAATATTGTTT...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGCATAGAGAAGGGCTATaGACAAAGCACCCTATGTTC +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAEHREGL*TKHPMF
Trigger: GAACATAGGGTGCTTTGTGCATAGCCCTTCTCTATG...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTCTTCCTTCTGTAACGTaGTGCCTTTACTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSLPSVT*CLYFPS
Trigger: GCTGGGAAAGTAAAGGCAGCACGTTACAGAAGGAAG...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCCCAGGGGACCTTATCTaGAAGACAGGATCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLPGDLI*KTGSGG
Trigger: GCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGG...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCAGTGTGCAAACTTTTATaGTTGGCTTTGCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAVCKLL*LALLTQ
Trigger: CTGAGTGAGCAAAGCCAATCATAAAAGTTTGCACAC...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTAATGACTGCCATGGCTaGTTACATAGAGAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSNDCHG*LHREGL
Trigger: TAGCCCTTCTCTATGTAAGCAGCCATGGCAGTCATT...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGTTGCTGAAACACACTTaGCTGAATGGAGACCATCAA +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAELLKHT*LNGDHQ
Trigger: TTGATGGTCTCCATTCAGGCAAGTGTGTTTCAGCAA...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATGAAAGACAGAAAACTTaGGACAGCTCAACCCTTTAT +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNERQKT*DSSTLY
Trigger: ATAAAGGGTTGAGCTGTCCCAAGTTTTCTGTCTTTC...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTATGAATGGCATCCACTaGGCAAAGTCCTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSMNGIH*AKSFEA
Trigger: TGCTTCAAAGGACTTTGCCCAGTGGATGCCATTCAT...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTCTCAGCACAATTCTCTaGAATTCATCCCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSLSTIL*NSSQWL
Trigger: CAACCACTGGGATGAATTCCAGAGAATTGTGCTGAG...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCTTTGTACTAGGTTTTaGCTTATAGCTCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNLCTRF*LIAQFL
Trigger: GAGGAACTGAGCTATAAGCCAAAACCTAGTACAAAG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CAA 72 bp TGGGATGTGGACTCAGCCCCTCTGAGTCTAGTTTTCTaGTCTGTAAGAGCCAATGATGACGTGCATCTCATT +
Preference number: 4 (lower is better)
Translates to: WDVDSAPLSLVF*SVRANDDVHLI
Trigger: AATGAGATGCACGTCATCATTGGCTCTTACAGACAAGAAAACTAGACTCAGAGGGGCTGAGTCCACATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTTTTCTCTTGTATAAATaGCCAGGAGCAATTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GWQGCYEPFNKETVVNSCFLLYK*PGAIEG
Trigger: ACCCTCAATTGCTCCTGGGCATTTATACAAGAGAAA...ACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCAAAATTCTACTTCTTCTaGAGACACTGCGATCATCTG +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAKFYFF*RHCDHL
Trigger: CAGATGATCGCAGTGTCTCCAGAAGAAGTAGAATTT...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTTGGAATTCATCCCAGTaGTTGCCCATGTCAGTAATT +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSWNSSQ*LPMSVI
Trigger: AATTACTGACATGGGCAACCACTGGGATGAATTCCA...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGTCGATGAGTCTGGATTaGATACAATGGAATAAAGAC +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAESMSLD*IQWNKD
Trigger: GTCTTTATTCCATTGTATTCAATCCAGACTCATCGA...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTGCACAAGTTTTTGTGTaGACCTCTTTTCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: GWQGCYEPFNKETVVNSCAQVFV*TSFHFS
Trigger: AGAGAAATGAAAAGAGGTTCACACAAAAACTTGTGC...ACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp GGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTCCAGGATTTTCACATTaGTTTGGTCAAGATACTGAA +
Preference number: 4 (lower is better)
Translates to: GWQGCYEPFNKETVVNSCPGFSH*FGQDTE
Trigger: TTCAGTATCTTGACCAAATCAATGTGAAAATCCTGG...ACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATTTTCATGCGCTTATTTaGCATTTTTATATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNFHALI*HFYILC
Trigger: GCAGAGGATATAAAAATGGCAAATAAGCGCATGAAA...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGTTTTATGATTGGCTTTaGTCACTCAGCACAATTCTC +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAEFYDWL*SLSTIL
Trigger: GAGAATTGTGCTGAGTGAGCAAAGCCAATCATAAAA...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCCAGGCAGTTCCCAAATaGCAGTCCTTGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLQAVPK*QSLDLL
Trigger: AAGAAGATCCAAGGACTGCCATTTGGGAACTGCCTG...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCCCTCCCTTGAAATACTaGATGCGCCTCCATACCATT +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLPPLKY*MRLHTI
Trigger: AATGGTATGGAGGCGCATCCAGTATTTCAAGGGAGG...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCAACTGTTTTCATGTTATaGTGGGAGAAAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEATVFML*WEKSCI
Trigger: AATGCAGCTTTTCTCCCACCATAACATGAAAACAGT...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCATCACTACATAGGTCCTaGGTAAGTTTTGTTTATACG +
Preference number: 4 (lower is better)
Translates to: YKRKPSQGTLSARQDQEASLHRS*VSFVYT
Trigger: CGTATAAACAAAACTTACCCAGGACCTATGTAGTGA...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTGAAATATTCCTCCCTTaGAATACTGGATGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLEIFLP*NTGCAS
Trigger: GGAGGCGCATCCAGTATTTCAAGGGAGGAATATTTC...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTATTTGGTCAAGATACTaGATATGTCCATCACCACAA +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSIWSRY*ICPSPQ
Trigger: TTGTGGTGATGGACATATTCAGTATCTTGACCAAAT...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGAGGTTTTCATTTAAGTaGAAACACCAAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAERFSFK*KHQGLS
Trigger: AGAAAGTCCTTGGTGTTTGCACTTAAATGAAAACCT...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTTTTCTCTTTAATGACTaGCATGGCTGCTTACATAGA +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSFLFND*HGCLHR
Trigger: TCTATGTAAGCAGCCATGGCAGTCATTAAAGAGAAA...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGTCCTGAGACCTTGTTaGACTCACATACTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLVLRPC*THILVP
Trigger: TGGAACTAGTATGTGAGTGCAACAAGGTCTCAGGAC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CAA 72 bp TTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTaGGCAGAGCAAGCAACAAAGATACTCTCACAATAC +
Preference number: 4 (lower is better)
Translates to: FVVTVNLEPRLH*AEQATKILSQY
Trigger: GTATTGTGAGAGTATCTTTGTTGCTTGCTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTAAGAACCATTCATATTaGCGAGGCCACTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLKNHSY*RGHFLI
Trigger: GATGAGGAAGTGGCCTCGTCAATATGAATGGTTCTT...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTGGCCTTTCTGGGAACTaGTTTGAAATATTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLGLSGN*FEIFLP
Trigger: AGGGAGGAATATTTCAAAGCAGTTCCCAGAAAGGCC...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGGTGCCTTGAAAACATaGCTTGCTTGGCAAATTCTA +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLGALKT*LAWQIL
Trigger: TAGAATTTGCCAAGCAAGCCATGTTTTCAAGGCACC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGAGAGCTTCTTATTTTaGATGCCCCTGTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLESFLF*MPLFMH
Trigger: ATGCATGAACAGGGGCATCCAAAATAAGAAGCTCTC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTATCAGTGGTTATGAATaGCATCCACTGGGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLISGYE*HPLGKV
Trigger: GACTTTGCCCAGTGGATGCCATTCATAACCACTGAT...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTTCCAATCCAAGAACATaGTATCTCTCTTTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSSNPRT*YLSFFV
Trigger: AACAAAGAAAGAGAGATACCATGTTCTTGGATTGGA...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTCCTCCATACCATTTCTaGAGCCAGATATGTTCTATC +
Preference number: 4 (lower is better)
Translates to: KETVVNSCLAASLKRFSFPPYHF*SQICSI
Trigger: GATAGAACATATCTGGCTTCAGAAATGGTATGGAGG...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCTTCTGGGAACTGCTTTaGAATATTCCTCCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLFWELL*NIPPLK
Trigger: TTTCAAGGGAGGAATATTTCAAAGCAGTTCCCAGAA...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTTTGACTTTTGTATGCTaGTCTTGTGTCCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: KETVVNSCLAASLKRFSFLTFVC*SCVLRP
Trigger: AGGTCTCAGGACACAAGATCAGCATACAAAAGTCAA...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCTTATATCCTCTGCAGTaGAATGTCTGTTCATGTGCT +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLLYPLQ*NVCSCA
Trigger: AGCACATGAACAGACATTTCACTGCAGAGGATATAA...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCCCGTTAAAGGCCATCTaGTTTCTCCAAGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLPLKAI*FLQVFE
Trigger: TTCAAAAACTTGGAGAAATCAGATGGCCTTTAACGG...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTGCTTCTTATTTTGGATaGCCCTGTTCATGCATGAGA +
Preference number: 4 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLASYFG*PCSCMR
Trigger: TCTCATGCATGAACAGGGGCATCCAAAATAAGAAGC...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTCTAAAAACAATATTGTaGCTGCGTGATGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: KETVVNSCLAASLKRFSFLKTIL*LRDAQS
Trigger: TGACTGTGCATCACGCAGTCACAATATTGTTTTTAG...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCTTGAGGACTGGCTTATaGCAAATAAAGAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLLRTGL*QIKNSL
Trigger: CAGAGAATTCTTTATTTGTCATAAGCCAGTCCTCAA...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR TCA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTGGAGATGGGGAGAACTaGTATCTTTACTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: KETVVNSCLAASLKRFSFGDGEN*YLYCLY
Trigger: ATACAAACAGTAAAGATATCAGTTCTCCCCATCTCC...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGTTTTCATGTTATGGTaGGAGAAAAGCTGCATTCTA +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLVFMLW*EKSCIL
Trigger: TAGAATGCAGCTTTTCTCCCACCATAACATGAAAAC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTAATGGTTTTGCGGAGTaGCTGTTCCATTTTCTATTC +
Preference number: 4 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLNGFAE*LFHFLF
Trigger: GAATAGAAAATGGAACAGCCACTCCGCAAAACCATT...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CAA 72 bp TGTATGTTTAGTTTTATGAGAAACTGGCAAATGGTTTaGCGGAGTGGCTGTTCCATTTTCTATTCCCACCAC +
Preference number: 4 (lower is better)
Translates to: CMFSFMRNWQMV*RSGCSIFYSHH
Trigger: GTGGTGGGAATAGAAAATGGAACAGCCACTCCGCAAAACCATTTGCCAGTTTCTCATAAAACTAAACATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR GCA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCGAGAGAGAGTATAAATaGTTTATTAAGCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLEREYK*FIKLSP
Trigger: AGGGCTTAGCTTAATAAAGCATTTATACTCTCTCTC...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTAAAACATGGCTTGCTTaGCAAATTCTACTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLKTWLA*QILLLL
Trigger: CAGAAGAAGTAGAATTTGCCAAGCAAGCCATGTTTT...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTAGTTTTATGAGAAACTaGCAAATGGTTTTGCGGAGT +
Preference number: 4 (lower is better)
Translates to: KETVVNSCLAASLKRFSFSFMRN*QMVLRS
Trigger: ACTCCGCAAAACCATTTGCCAGTTTCTCATAAAACT...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CAA 72 bp CAAGATACTGAATATGTCCATCACCACAAGGATCTCTaGTGCTATCCTTTTATAGTTATGCCCAACTCTCTT +
Preference number: 4 (lower is better)
Translates to: QDTEYVHHHKDL*CYPFIVMPNSL
Trigger: AAGAGAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACATATTCAGTATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CAA 72 bp ACAGTACAATATCCCAACCAGGATTTTCACATTGATTaGGTCAAGATACTGAATATGTCCATCACCACAAGG +
Preference number: 4 (lower is better)
Translates to: TVQYPNQDFHID*VKILNMSITTR
Trigger: CCTTGTGGTGATGGACATATTCAGTATCTTGACCAAATCAATGTGAAAATCCTGGTTGGGATATTGTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CCA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTGGAAGTATTTCACTTTaGAGTGATTGCAAATGGTAT +
Preference number: 4 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLGSISL*SDCKWY
Trigger: ATACCATTTGCAATCACTCCAAAGTGAAATACTTCC...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
3UTR CAA 72 bp TCTTTTCATTTCTCTTGTATAAATGCCCAGGAGCAATaGAGGGTCAGTATGGCAGTTGTATGTTTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: SFHFSCINAQEQ*RVSMAVVCLVL
Trigger: TAAAACTAAACATACAACTGCCATACTGACCCTCAATTGCTCCTGGGCATTTATACAAGAGAAATGAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS GCA 90 bp CGGAGCTCACGATCACGTAGCCCGCGGCCGGGGACAGCAGGGCGCTaGAGCACAGCAGCCAGGAGAGGCGGGTCCCCGGCCGCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: RSSRSRSPRPGTAGR*STAARRGGSPAAPA
Trigger: GGCCGGCGCGGCCGGGGACCCGCCTCTCCTGGCTGCTGTGCTGCAGCGCCCTGCTGTCCCCGGCCGCGGGCTACGTGATCGTGAGCTCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324768.6
ENST00000486966.1
CDS CCA 90 bp GCCCGGGCGGCGCCCGCCCGGGGCCGCAGGTGCGCGTCCTCCTTGTaGGCAGAGGCGGGGAAGCTTTGCTGCCAGATGCTGCCCGAATCC +
Preference number: 5 (lower is better)
Translates to: ARAAPARGRRCASSL*AEAGKLCCQMLPES
Trigger: GGATTCGGGCAGCATCTGGCAGCAAAGCTTCCCCGCCTCTGCCCACAAGGAGGACGCGCACCTGCGGCCCCGGGCGGGCGCCGCCCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324768.6
ENST00000486966.1
CDS GCA 90 bp GGCCGCAGGTGCGCGTCCTCCTTGTGGGCAGAGGCGGGGAAGCTTTaGTGCCAGATGCTGCCCGAATCCTCTAGCAGCGCGGGCATAGCC +
Preference number: 5 (lower is better)
Translates to: GRRCASSLWAEAGKL*CQMLPESSSSAGIA
Trigger: GGCTATGCCCGCGCTGCTAGAGGATTCGGGCAGCATCTGGCAGCAAAGCTTCCCCGCCTCTGCCCACAAGGAGGACGCGCACCTGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324768.6
ENST00000486966.1
CDS GCA 90 bp CGCAGGTGCGCGTCCTCCTTGTGGGCAGAGGCGGGGAAGCTTTGCTaGCAGATGCTGCCCGAATCCTCTAGCAGCGCGGGCATAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RRCASSLWAEAGKLC*QMLPESSSSAGIAS
Trigger: GGAGGCTATGCCCGCGCTGCTAGAGGATTCGGGCAGCATCTGGCAGCAAAGCTTCCCCGCCTCTGCCCACAAGGAGGACGCGCACCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324768.6
ENST00000486966.1
CDS-3UTR CAA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCGGCGCACGGACATCTaGCAGGCAGCACGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNRRTDI*QAARPA
Trigger: GGCCGGGCGTGCTGCCTGCAAGATGTCCGTGCGCCG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS CCA 90 bp CTCTGCAGAACTCCCCTTCTGATTCTGGCAGCATCAGCGAGGCCATaGGGTTCTTCATCAGATCAGCCACCACGGGGTCCTTGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LCRTPLLILAASARP*GSSSDQPPRGPWLS
Trigger: TGACAGCCAAGGACCCCGTGGTGGCTGATCTGATGAAGAACCCCATGGCCTCGCTGATGCTGCCAGAATCAGAAGGGGAGTTCTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486966.1
CDS-3UTR CAA 90 bp GGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTAGGTGCGCGTCCTCCTaGTGGGCAGAGGCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: GWQGCYEPFNKETVVNSCRCASS*WAEAGK
Trigger: CTTCCCCGCCTCTGCCCACAAGGAGGACGCGCACCT...ACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS CCA 90 bp TTCTGCAGAACTCCCCTTCTGATTCTGGCAGCATCAGCGAGGCCATaGGGTTCTTCATCAGATCAGCCACCACGGGGTCCTTGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: FCRTPLLILAASARP*GSSSDQPPRGPWLS
Trigger: TGACAGCCAAGGACCCCGTGGTGGCTGATCTGATGAAGAACCCCATGGCCTCGCTGATGCTGCCAGAATCAGAAGGGGAGTTCTGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS CCA 90 bp AACTGCAGAACTCCCCTTCTGATTCTGGCAGCATCAGCGAGGCCATaGGGTTCTTCATCAGATCAGCCACCACGGGGTCCTTGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: NCRTPLLILAASARP*GSSSDQPPRGPWLS
Trigger: TGACAGCCAAGGACCCCGTGGTGGCTGATCTGATGAAGAACCCCATGGCCTCGCTGATGCTGCCAGAATCAGAAGGGGAGTTCTGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS-3UTR CAA 90 bp GGATGGCAGGGCTGCTATGAACCCTTCAACAAAGAGACAGTGGTCAATAGCTGTTCCTCGTCCACCTCGTaGGTGACGGCCCAAGACACG +
Preference number: 5 (lower is better)
Translates to: GWQGCYEPFNKETVVNSCSSSTS*VTAQDT
Trigger: CGTGTCTTGGGCCGTCACCAACGAGGTGGACGAGGA...ACAGCTATTGACCACTGTCTCTTTGTTGAAGGGTTCATAGCAGCCCTGCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTAGAGGCGGGGAAGCTTaGCTGCCAGATGCTGCCCGA +
Preference number: 5 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSRGGEA*LPDAAR
Trigger: TCGGGCAGCATCTGGCAGCAAAGCTTCCCCGCCTCT...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS CCA 90 bp TGGTGGGGAACAGGGTCAGCTGAAGTGTCTCCATGTGGTCTGTCGTaGCTGAGGGGAAACAATGGCTTATCCAGGATGCATCTTGCATTG +
Preference number: 5 (lower is better)
Translates to: WWGTGSAEVSPCGLS*LRGNNGLSRMHLAL
Trigger: CAATGCAAGATGCATCCTGGATAAGCCATTGTTTCCCCTCAGCCACGACAGACCACATGGAGACACTTCAGCTGACCCTGTTCCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS TCA 90 bp CTGGGAGCCACATGCTCCAGCACGACTGCTTTCAGGATACCTGAATaGGGAAAGCCTGGGAAGCTTAGAAAGGTATCCTGGATTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LGATCSSTTAFRIPE*GKPGKLRKVSWIGR
Trigger: CCTTCCAATCCAGGATACCTTTCTAAGCTTCCCAGGCTTTCCTCATTCAGGTATCCTGAAAGCAGTCGTGCTGGAGCATGTGGCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS-3UTR CAA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATTTATGCCCAACTCTCTaGTTCTCCCCACTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNLCPTL*FSPLLP
Trigger: AGGGAGGAGTGGGGAGAACAAGAGAGTTGGGCATAA...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS TCA 90 bp GGGGAACAGGGTCAGCTGAAGTGTCTCCATGTGGTCTGTCGTGGCTaGGGGGAAACAATGGCTTATCCAGGATGCATCTTGCATTGTATA +
Preference number: 5 (lower is better)
Translates to: GEQGQLKCLHVVCRG*GETMAYPGCILHCI
Trigger: TATACAATGCAAGATGCATCCTGGATAAGCCATTGTTTCCCCTCAGCCACGACAGACCACATGGAGACACTTCAGCTGACCCTGTTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS CCA 90 bp GCTTGCTTGGCAAATTCTACTTCTTCTGGAGACACTGCGATCATCTaGCCAGTGAGCGTTAACTGGACACATCGGGGATCTTCCGGATCA +
Preference number: 5 (lower is better)
Translates to: ACLANSTSSGDTAII*PVSVNWTHRGSSGS
Trigger: TGATCCGGAAGATCCCCGATGTGTCCAGTTAACGCTCACTGGCCAGATGATCGCAGTGTCTCCAGAAGAAGTAGAATTTGCCAAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCAATCCCAGTGCTATTGTaGAAGGGGCCATCACTGACG +
Preference number: 5 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAIPVLL*KGPSLT
Trigger: CGTCAGTGATGGCCCCTTCAACAATAGCACTGGGAT...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCATGAGATGGCTTCTGTaGAGGGCCTGGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLMRWLL*RAWPRA
Trigger: GGCCCTGGGCCAGGCCCTCAACAGAAGCCATCTCAT...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS TCA 90 bp TGGCAAATTCTACTTCTTCTGGAGACACTGCGATCATCTGGCCAGTaGGCGTTAACTGGACACATCGGGGATCTTCCGGATCAACGATGT +
Preference number: 5 (lower is better)
Translates to: WQILLLLETLRSSGQ*ALTGHIGDLPDQRC
Trigger: ACATCGTTGATCCGGAAGATCCCCGATGTGTCCAGTTAACGCTCACTGGCCAGATGATCGCAGTGTCTCCAGAAGAAGTAGAATTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTGGAATCCCAGTGCTATaGTTGAAGGGGCCATCACTG +
Preference number: 5 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSGIPVL*LKGPSL
Trigger: CAGTGATGGCCCCTTCAACAATAGCACTGGGATTCC...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATGAACCAAGACTGCATTaGGCAGAGCAAGCAACAAAG +
Preference number: 5 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNEPRLH*AEQATK
Trigger: CTTTGTTGCTTGCTCTGCCAAATGCAGTCTTGGTTC...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATGGTTTATCTGCATCCTaGTCAGCGTTTGGTGTTATC +
Preference number: 5 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNGLSAS*SAFGVI
Trigger: GATAACACCAAACGCTGACAAGGATGCAGATAAACC...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTAGTCCTTGGATCTTCTaGTGGGTGGACACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: KETVVNSCLAASLKRFSFSPWIF*WVDTVA
Trigger: GGCCACCGTGTCCACCCACAAGAAGATCCAAGGACT...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATAAAGAACCATTCATATaGACGAGGCCACTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNKEPFI*TRPLPH
Trigger: ATGAGGAAGTGGCCTCGTCAATATGAATGGTTCTTT...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp GCAGGAGGAGTAATCCACGGACACACAGTCCTCCACCCTCACCCTAAAAACAATCTGAGTCTAGTTTTCTaGTCTGTAAGAGCCAATGAT +
Preference number: 5 (lower is better)
Translates to: AGGVIHGHTVLHPHPKNNLSLVF*SVRAND
Trigger: ATCATTGGCTCTTACAGACAAGAAAACTAGACTCAG...ATTGTTTTTAGGGTGAGGGTGGAGGACTGTGTGTCCGTGGATTACTCCTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS TCA 90 bp ACTCCATCAGGCCTTTCTGGGAACTGCTTTGAAATATTCCTCCCTTaGAATACTGGATGCGCCTCCATACCATTTCTGAAGCCAGATATG +
Preference number: 5 (lower is better)
Translates to: TPSGLSGNCFEIFLP*NTGCASIPFLKPDM
Trigger: CATATCTGGCTTCAGAAATGGTATGGAGGCGCATCCAGTATTTCAAGGGAGGAATATTTCAAAGCAGTTCCCAGAAAGGCCTGATGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS TCA 90 bp CAAGGACTTTCTTCTCACTCCATCAGGCCTTTCTGGGAACTGCTTTaGAATATTCCTCCCTTGAAATACTGGATGCGCCTCCATACCATT +
Preference number: 5 (lower is better)
Translates to: QGLSSHSIRPFWELL*NIPPLKYWMRLHTI
Trigger: AATGGTATGGAGGCGCATCCAGTATTTCAAGGGAGGAATATTTCAAAGCAGTTCCCAGAAAGGCCTGATGGAGTGAGAAGAAAGTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTCCCAAATGGCAGTCCTaGGATCTTCTTGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLPKWQS*DLLVGG
Trigger: TCCACCCACAAGAAGATCCAAGGACTGCCATTTGGG...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp AAAGAGACAGTGGTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTTCATCCCTGGGTGCCTaGAAAACATGGCTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: KETVVNSCLAASLKRFSFSSLGA*KTWLAW
Trigger: CCAAGCAAGCCATGTTTTCAAGGCACCCAGGGATGA...AAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGACCACTGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TATAAACGCAAACCTAGCCAGGGGACCTTATCTGCAAGACAGGATCAGGAGGCATTTCTGGGAACTGCTTaGAAATATTCCTCCCTTGAA +
Preference number: 5 (lower is better)
Translates to: YKRKPSQGTLSARQDQEAFLGTA*KYSSLE
Trigger: TTCAAGGGAGGAATATTTCAAAGCAGTTCCCAGAAA...TGCCTCCTGATCCTGTCTTGCAGATAAGGTCCCCTGGCTAGGTTTGCGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp GTCAGCTGCTTCGTGGTCACAGTGAACTTAGAACCAAGACTGCATTTGGCAGAGCTTTTTCTTGCCTTATaGCCATGTCTAGAACTTCCA +
Preference number: 5 (lower is better)
Translates to: VSCFVVTVNLEPRLHLAELFLAL*PCLELP
Trigger: TGGAAGTTCTAGACATGGCAATAAGGCAAGAAAAAG...CTCTGCCAAATGCAGTCTTGGTTCTAAGTTCACTGTGACCACGAAGCAGCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS TCA 90 bp AGCCAGATATGTTCTATCCTCATCTTCATAAAGAACCATTCATATTaGCGAGGCCACTTCCTCATCCCTGGGTGCCTTGAAAACATGGCT +
Preference number: 5 (lower is better)
Translates to: SQICSILIFIKNHSY*RGHFLIPGCLENMA
Trigger: AGCCATGTTTTCAAGGCACCCAGGGATGAGGAAGTGGCCTCGTCAATATGAATGGTTCTTTATGAAGATGAGGATAGAACATATCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS GCA 90 bp GTCAATAGCTGTCTGGCTGCATCACTGAAAAGGTTTTCATTTAAGTaGAAACACCAAGGACTTTCTTCTCACTCCATCAGGCCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VNSCLAASLKRFSFK*KHQGLSSHSIRPFW
Trigger: CCAGAAAGGCCTGATGGAGTGAGAAGAAAGTCCTTGGTGTTTGCACTTAAATGAAAACCTTTTCAGTGATGCAGCCAGACAGCTATTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTGTAAAAGAAAATCAGTaGAGCATATTTGTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSVKENQ*SIFVWA
Trigger: GGCCCACACAAATATGCTCAACTGATTTTCTTTTAC...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TTGCTCACTCAGCACAATTCTCTGGAATTCATCCCAGTGGTTGCCCATGTCAGTTCTCAACATGTCATTTaGACCACCAGCTATTATATG +
Preference number: 5 (lower is better)
Translates to: LLTQHNSLEFIPVVAHVSSQHVI*TTSYYM
Trigger: CATATAATAGCTGGTGGTCAAAATGACATGTTGAGA...ACTGACATGGGCAACCACTGGGATGAATTCCAGAGAATTGTGCTGAGTGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTGGAGAGCTTCTTATTTaGGATGCCCCTGTTCATGCA +
Preference number: 5 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLGELLI*DAPVHA
Trigger: TGCATGAACAGGGGCATCCAAAATAAGAAGCTCTCC...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TGTCCATCACCACAAGGATCTCTTGTGCTATCCTTTTATAGTTATGCCCAACTCTTTGCTGAAACACACTaGCCTGAATGGAGACCATCA +
Preference number: 5 (lower is better)
Translates to: CPSPQGSLVLSFYSYAQLFAETH*PEWRPS
Trigger: TGATGGTCTCCATTCAGGCAAGTGTGTTTCAGCAAA...GAGTTGGGCATAACTATAAAAGGATAGCACAAGAGATCCTTGTGGTGATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS-3UTR CAA 90 bp TTCCCTATTCTGTTCCATCAATGTGTTTCTATGCCTCCACCAAATACCACACTTCACCACAAGGATCTCTaGTGCTATCCTTTTATAGTT +
Preference number: 5 (lower is better)
Translates to: FPILFHQCVSMPPPNTTLHHKDL*CYPFIV
Trigger: AACTATAAAAGGATAGCACAAGAGATCCTTGTGGTG...AAGTGTGGTATTTGGTGGAGGCATAGAAACACATTGATGGAACAGAATAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS TCA 90 bp AAATATTCCTCCCTTGAAATACTGGATGCGCCTCCATACCATTTCTaGAGCCAGATATGTTCTATCCTCATCTTCATAAAGAACCATTCA +
Preference number: 5 (lower is better)
Translates to: KYSSLEILDAPPYHF*SQICSILIFIKNHS
Trigger: TGAATGGTTCTTTATGAAGATGAGGATAGAACATATCTGGCTTCAGAAATGGTATGGAGGCGCATCCAGTATTTCAAGGGAGGAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS CAA 90 bp CTGGCCCGGGCGGCGCCCGCCCGGGGCCGCAGGTGCGCGTCCTCCTaGTGGGCAGAGGCGGGGAAGCTTTGCTGCCAGATGCTGCCCGAA +
Preference number: 6 (lower is better)
Translates to: LARAAPARGRRCASS*WAEAGKLCCQMLPE
Trigger: TTCGGGCAGCATCTGGCAGCAAAGCTTCCCCGCCTCTGCCCACAAGGAGGACGCGCACCTGCGGCCCCGGGCGGGCGCCGCCCGGGCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324768.6
ENST00000486966.1
CDS CAA 72 bp GCGGCGCCCGCCCGGGGCCGCAGGTGCGCGTCCTCCTaGTGGGCAGAGGCGGGGAAGCTTTGCTGCCAGATG +
Preference number: 6 (lower is better)
Translates to: AAPARGRRCASS*WAEAGKLCCQM
Trigger: CATCTGGCAGCAAAGCTTCCCCGCCTCTGCCCACAAGGAGGACGCGCACCTGCGGCCCCGGGCGGGCGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324768.6
ENST00000486966.1
CDS CCA 72 bp GCGCCCGCCCGGGGCCGCAGGTGCGCGTCCTCCTTGTaGGCAGAGGCGGGGAAGCTTTGCTGCCAGATGCTG +
Preference number: 6 (lower is better)
Translates to: APARGRRCASSL*AEAGKLCCQML
Trigger: CAGCATCTGGCAGCAAAGCTTCCCCGCCTCTGCCCACAAGGAGGACGCGCACCTGCGGCCCCGGGCGGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324768.6
ENST00000486966.1
CDS GCA 72 bp GCGTCCTCCTTGTGGGCAGAGGCGGGGAAGCTTTGCTaGCAGATGCTGCCCGAATCCTCTAGCAGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: ASSLWAEAGKLC*QMLPESSSSAG
Trigger: GCCCGCGCTGCTAGAGGATTCGGGCAGCATCTGGCAGCAAAGCTTCCCCGCCTCTGCCCACAAGGAGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324768.6
ENST00000486966.1
CDS GCA 72 bp TGCGCGTCCTCCTTGTGGGCAGAGGCGGGGAAGCTTTaGTGCCAGATGCTGCCCGAATCCTCTAGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: CASSLWAEAGKL*CQMLPESSSSA
Trigger: CGCGCTGCTAGAGGATTCGGGCAGCATCTGGCAGCAAAGCTTCCCCGCCTCTGCCCACAAGGAGGACGCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324768.6
ENST00000486966.1
CDS CCA 72 bp ATGGCAGTCCTTGGATCTTCTTGTGGGTGGACACGGTaGCCAGGCAGCCCCAGACGCTGGCATGGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: MAVLGSSCGWTR*PGSPRRWHGPG
Trigger: CCCTGGCCCATGCCAGCGTCTGGGGCTGCCTGGCCACCGTGTCCACCCACAAGAAGATCCAAGGACTGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324768.6
ENST00000486966.1
ENST00000495455.5
CDS TCA 72 bp GCTTCTTGCTGTAACCTGGTGGGGAACAGGGTCAGCTaGAGTGTCTCCATGTGGTCTGTCGTGGCTGAGGGG +
Preference number: 6 (lower is better)
Translates to: ASCCNLVGNRVS*SVSMWSVVAEG
Trigger: CCCCTCAGCCACGACAGACCACATGGAGACACTTCAGCTGACCCTGTTCCCCACCAGGTTACAGCAAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS CCA 72 bp GAAGGGGCCATCACTGACGGGCAGGCAGTTCCCAAATaGCAGTCCTTGGATCTTCTTGTGGGTGGACACGGT +
Preference number: 6 (lower is better)
Translates to: EGAITDGQAVPK*QSLDLLVGGHG
Trigger: ACCGTGTCCACCCACAAGAAGATCCAAGGACTGCCATTTGGGAACTGCCTGCCCGTCAGTGATGGCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324768.6
ENST00000486966.1
ENST00000495455.5
CDS CCA 72 bp ACTCCCCTTCTGATTCTGGCAGCATCAGCGAGGCCATaGGGTTCTTCATCAGATCAGCCACCACGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: TPLLILAASARP*GSSSDQPPRGP
Trigger: AGGACCCCGTGGTGGCTGATCTGATGAAGAACCCCATGGCCTCGCTGATGCTGCCAGAATCAGAAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324768.6
ENST00000486966.1
ENST00000495455.5
CDS TCA 72 bp GGTCAGCTGAAGTGTCTCCATGTGGTCTGTCGTGGCTaGGGGGAAACAATGGCTTATCCAGGATGCATCTTG +
Preference number: 6 (lower is better)
Translates to: GQLKCLHVVCRG*GETMAYPGCIL
Trigger: CAAGATGCATCCTGGATAAGCCATTGTTTCCCCTCAGCCACGACAGACCACATGGAGACACTTCAGCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS CCA 72 bp GGAGACACTGCGATCATCTGGCCAGTGAGCGTTAACTaGACACATCGGGGATCTTCCGGATCAACGATGTTT +
Preference number: 6 (lower is better)
Translates to: GDTAIIWPVSVN*THRGSSGSTMF
Trigger: AAACATCGTTGATCCGGAAGATCCCCGATGTGTCCAGTTAACGCTCACTGGCCAGATGATCGCAGTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS CCA 72 bp ACAGGGTCAGCTGAAGTGTCTCCATGTGGTCTGTCGTaGCTGAGGGGAAACAATGGCTTATCCAGGATGCAT +
Preference number: 6 (lower is better)
Translates to: TGSAEVSPCGLS*LRGNNGLSRMH
Trigger: ATGCATCCTGGATAAGCCATTGTTTCCCCTCAGCCACGACAGACCACATGGAGACACTTCAGCTGACCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS CCA 72 bp TGGGGTTCTTCATCAGATCAGCCACCACGGGGTCCTTaGCTGTCATGTAGAAGAAAGGAATCCCAGTGCTAT +
Preference number: 6 (lower is better)
Translates to: WGSSSDQPPRGP*LSCRRKESQCY
Trigger: ATAGCACTGGGATTCCTTTCTTCTACATGACAGCCAAGGACCCCGTGGTGGCTGATCTGATGAAGAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324768.6
ENST00000486966.1
ENST00000495455.5
CDS TCA 72 bp ACATGCTCCAGCACGACTGCTTTCAGGATACCTGAATaGGGAAAGCCTGGGAAGCTTAGAAAGGTATCCTGG +
Preference number: 6 (lower is better)
Translates to: TCSSTTAFRIPE*GKPGKLRKVSW
Trigger: CCAGGATACCTTTCTAAGCTTCCCAGGCTTTCCTCATTCAGGTATCCTGAAAGCAGTCGTGCTGGAGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS CCA 72 bp GCAAATTCTACTTCTTCTGGAGACACTGCGATCATCTaGCCAGTGAGCGTTAACTGGACACATCGGGGATCT +
Preference number: 6 (lower is better)
Translates to: ANSTSSGDTAII*PVSVNWTHRGS
Trigger: AGATCCCCGATGTGTCCAGTTAACGCTCACTGGCCAGATGATCGCAGTGTCTCCAGAAGAAGTAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS CAA 90 bp CCAAGGACTTTCTTCTCACTCCATCAGGCCTTTCTGGGAACTGCTTaGAAATATTCCTCCCTTGAAATACTGGATGCGCCTCCATACCAT +
Preference number: 6 (lower is better)
Translates to: PRTFFSLHQAFLGTA*KYSSLEILDAPPYH
Trigger: ATGGTATGGAGGCGCATCCAGTATTTCAAGGGAGGAATATTTCAAAGCAGTTCCCAGAAAGGCCTGATGGAGTGAGAAGAAAGTCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS TCA 72 bp TCTTCTCACTCCATCAGGCCTTTCTGGGAACTGCTTTaGAATATTCCTCCCTTGAAATACTGGATGCGCCTC +
Preference number: 6 (lower is better)
Translates to: SSHSIRPFWELL*NIPPLKYWMRL
Trigger: GAGGCGCATCCAGTATTTCAAGGGAGGAATATTTCAAAGCAGTTCCCAGAAAGGCCTGATGGAGTGAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS TCA 72 bp GGCCTTTCTGGGAACTGCTTTGAAATATTCCTCCCTTaGAATACTGGATGCGCCTCCATACCATTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: GLSGNCFEIFLP*NTGCASIPFLK
Trigger: CTTCAGAAATGGTATGGAGGCGCATCCAGTATTTCAAGGGAGGAATATTTCAAAGCAGTTCCCAGAAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS GCA 72 bp TGTCTGGCTGCATCACTGAAAAGGTTTTCATTTAAGTaGAAACACCAAGGACTTTCTTCTCACTCCATCAGG +
Preference number: 6 (lower is better)
Translates to: CLAASLKRFSFK*KHQGLSSHSIR
Trigger: CCTGATGGAGTGAGAAGAAAGTCCTTGGTGTTTGCACTTAAATGAAAACCTTTTCAGTGATGCAGCCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS CAA 72 bp GCTTATCCAGGATGCATCTTGCATTGTATAGTTGCTTaGATTAGCCTCTGTAAGAACTGCAGAACTCCCCTT +
Preference number: 6 (lower is better)
Translates to: AYPGCILHCIVA*ISLCKNCRTPL
Trigger: AAGGGGAGTTCTGCAGTTCTTACAGAGGCTAATCAAAGCAACTATACAATGCAAGATGCATCCTGGATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS TCA 72 bp TCCCTTGAAATACTGGATGCGCCTCCATACCATTTCTaGAGCCAGATATGTTCTATCCTCATCTTCATAAAG +
Preference number: 6 (lower is better)
Translates to: SLEILDAPPYHF*SQICSILIFIK
Trigger: CTTTATGAAGATGAGGATAGAACATATCTGGCTTCAGAAATGGTATGGAGGCGCATCCAGTATTTCAAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324768.6
CDS TCA 72 bp TCCTGGAAATGTACTTCTAGTAACAGTAAGCTTGACTaGCCAAGAACAGGGAGAATATTCCATGAGAAAGGA +
Preference number: 6 (lower is better)
Translates to: SWKCTSSNSKLD*PRTGRIFHEKG
Trigger: TCCTTTCTCATGGAATATTCTCCCTGTTCTTGGTCAGTCAAGCTTACTGTTACTAGAAGTACATTTCCAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495455.5
CDS CAA 72 bp AGGTATCCTGGAAATGTACTTCTAGTAACAGTAAGCTaGACTGACCAAGAACAGGGAGAATATTCCATGAGA +
Preference number: 6 (lower is better)
Translates to: RYPGNVLLVTVS*TDQEQGEYSMR
Trigger: TCTCATGGAATATTCTCCCTGTTCTTGGTCAGTCAAGCTTACTGTTACTAGAAGTACATTTCCAGGATACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495455.5