Pregenerated sensors for CREG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000143162Ensembl transcript IDs: ENST00000370509.5, ENST00000466652.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCCAGGGAATGCTCTCAGGTCCCAGAAAACACCTGCAGTTCCTTaGCAGGTGGCCCCCATAGGCAGTTCACAATGTGGATGTTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: WPGNALRSQKTPAVP*QVAPIGSSQCGCLL Trigger: AAGCAAACATCCACATTGTGAACTGCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGCATTCCCTGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR TCA 90 bp | CCTTTTGCACCAGGCTCAGGCAGCTCAGGAGGCAGCTGTGGTGAGTaGTGCACTCTACCAAGCACAGTGGCTTCTAGGAATAAAGAACAC | + |
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Preference number: 1 (lower is better) Translates to: PFAPGSGSSGGSCGE*CTLPSTVASRNKEH Trigger: GTGTTCTTTATTCCTAGAAGCCACTGTGCTTGGTAGAGTGCATCACTCACCACAGCTGCCTCCTGAGCTGCCTGAGCCTGGTGCAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR TCA 90 bp | CCTGATATAGCATGGCTGAGTTCTCTGCTCAGGTACTTACAAGGCTaGAATCAGTGTTGGCTGGGGCTGCAGTTCTCATTTGAGGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: PDIAWLSSLLRYLQG*NQCWLGLQFSFEAQ Trigger: CTGAGCCTCAAATGAGAACTGCAGCCCCAGCCAACACTGATTTCAGCCTTGTAAGTACCTGAGCAGAGAACTCAGCCATGCTATATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR GCA 90 bp | AGGATATGCCTGATCAGGTCAGGCCCACCCAGAACACTCTCCCTTTaGCACATAAAACCGCAAAAGCACAGGAGTGATAGCTCATCGTAT | + |
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Preference number: 1 (lower is better) Translates to: RICLIRSGPPRTLSL*HIKPQKHRSDSSSY Trigger: ATACGATGAGCTATCACTCCTGTGCTTTTGCGGTTTTATGTGGCAAAGGGAGAGTGTTCTGGGTGGGCCTGACCTGATCAGGCATATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CCA 90 bp | GCTCAGGAGGCAGCTGTGGTGAGTGATGCACTCTACCAAGCACAGTaGCTTCTAGGAATAAAGAACACATACTCAACTACCTTCAAATGC | + |
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Preference number: 1 (lower is better) Translates to: AQEAAVVSDALYQAQ*LLGIKNTYSTTFKC Trigger: GCATTTGAAGGTAGTTGAGTATGTGTTCTTTATTCCTAGAAGCCACTGTGCTTGGTAGAGTGCATCACTCACCACAGCTGCCTCCTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR CCA 90 bp | TTCAAAAAGATGCTCCCTTCTTCCTCTGGGAAGATCAGACACGCCTaGTGTTCATCTTTTTCACCAGATGGAAGAAGCTTGCCTGGGATC | + |
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Preference number: 1 (lower is better) Translates to: FKKMLPSSSGKIRHA*CSSFSPDGRSLPGI Trigger: GATCCCAGGCAAGCTTCTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAAGAAGGGAGCATCTTTTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CCA 90 bp | TTCCTCTCAGTTATAGGAGTGAGTTCCTGTTTTCCTGCTAATGATTaGCCAGGGAATGCTCTCAGGTCCCAGAAAACACCTGCAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: FLSVIGVSSCFPAND*PGNALRSQKTPAVP Trigger: AGGAACTGCAGGTGTTTTCTGGGACCTGAGAGCATTCCCTGGCCAATCATTAGCAGGAAAACAGGAACTCACTCCTATAACTGAGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CCA 90 bp | CTTGCTTCTGGCCCAAACACAGAGCATCTCTCTGACTTAGTCTTCTaGAACCAGCTGGAGAAAACTCTGATTTTAGAGGATATGCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: LASGPNTEHLSDLVF*NQLEKTLILEDMPD Trigger: ATCAGGCATATCCTCTAAAATCAGAGTTTTCTCCAGCTGGTTCCAGAAGACTAAGTCAGAGAGATGCTCTGTGTTTGGGCCAGAAGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CCA 90 bp | ATTTCTCACAGAAATGCTGTTCAAAAAGATGCTCCCTTCTTCCTCTaGGAAGATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGG | + |
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Preference number: 1 (lower is better) Translates to: ISHRNAVQKDAPFFL*EDQTRLVFIFFTRW Trigger: CCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAAGAAGGGAGCATCTTTTTGAACAGCATTTCTGTGAGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CCA 90 bp | GTGAGTAGGAAGCTCCATCTGAGTTTCATCATTGTTTGTCTATCTTaGCAAGATTTATTCAGAAGCACCATAATGGGGGCCAATCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: VSRKLHLSFIIVCLS*QDLFRSTIMGANPF Trigger: AAAAGGATTGGCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAATGATGAAACTCAGATGGAGCTTCCTACTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR TCA 90 bp | TTCTGGGACGCTTTCCAGAGAAACATTAAGCCTTTTAAGTGTGTATaGGCCACTTTAAGAAACTTCATAAGTGTTGCTAAATTCACCACA | + |
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Preference number: 1 (lower is better) Translates to: FWDAFQRNIKPFKCV*ATLRNFISVAKFTT Trigger: TGTGGTGAATTTAGCAACACTTATGAAGTTTCTTAAAGTGGCTCATACACACTTAAAAGGCTTAATGTTTCTCTGGAAAGCGTCCCAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR TCA 90 bp | GTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATTaGTGGGACAAAACTTATTTGATTATAGTGAAGGATATTTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: VLIPLQEHHWKHLWN*WDKTYLIIVKDISL Trigger: TAGAGAAATATCCTTCACTATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGTTTGGGAGGGGATTTTGTCCCTGGCTGAAGCTGGTCCATGCCTGGGTAGGCAGCTGTGGTGAGTaGTGCACTCTACCAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: EWFGRGFCPWLKLVHAWVGSCGE*CTLPST Trigger: TGTGCTTGGTAGAGTGCATCACTCACCACAGCTGCC...TACCCAGGCATGGACCAGCTTCAGCCAGGGACAAAATCCCCTCCCAAACCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGACACCTGCAGTTCCTTaGCAGGTGGCCCCCATAGGC | + |
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Preference number: 2 (lower is better) Translates to: WGCSSHLRLRVFFQAHWLTPAVP*QVAPIG Trigger: GCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGT...CAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CAA 90 bp | TTGGCCAGGGAATGCTCTCAGGTCCCAGAAAACACCTGCAGTTCCTaGCCAGGTGGCCCCCATAGGCAGTTCACAATGTGGATGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LARECSQVPENTCSS*PGGPHRQFTMWMFA Trigger: AGCAAACATCCACATTGTGAACTGCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGCATTCCCTGGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGCTCTCAGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCATGTTTGCTTGCTTCTaGCCCAAACACAGAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: GNALRSQKTPAVPCQVAPMFACF*PKHRAS Trigger: AGATGCTCTGTGTTTGGGCCAGAAGCAAGCAAACAT...GGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGCATTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTGGCTGGGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCCACAGAGCATCTCTCTaGCTTAGTCTTCTGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: QCWLGLQFSFEAQGLLPGHRASL*LSLLEP Trigger: TGGTTCCAGAAGACTAAGTCAGAGAGATGCTCTGTG...GCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCAGCCAACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCAGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCATAGGCAAGATCAGACACGCCTaGTGTTCATCTTTTTCACCA | + |
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Preference number: 2 (lower is better) Translates to: ALRSQKTPAVPCQVAPIGKIRHA*CSSFSP Trigger: TGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTT...GCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CAA 90 bp | GTTCCTTGCCAGGTGGCCCCCATAGGCAGTTCACAATGTGGATGTTaGCTTGCTTCTGGCCCAAACACAGAGCATCTCTCTGACTTAGTC | + |
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Preference number: 2 (lower is better) Translates to: VPCQVAPIGSSQCGC*LASGPNTEHLSDLV Trigger: GACTAAGTCAGAGAGATGCTCTGTGTTTGGGCCAGAAGCAAGCAAACATCCACATTGTGAACTGCCTATGGGGGCCACCTGGCAAGGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGTTTGGAAGAAGCTTGCCTaGGATCTGCTCTCAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GLQFSFEAQGLLPGSLVVWKKLA*DLLSAL Trigger: CAAAGCTGAGAGCAGATCCCAGGCAAGCTTCTTCCA...AACAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCATAGGCAGTTCAATCTTTTTCACCAGATaGAAGAAGCTTGCCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: RSQKTPAVPCQVAPIGSSIFFTR*KKLAWD Trigger: ATCCCAGGCAAGCTTCTTCCATCTGGTGAAAAAGAT...TGAACTGCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGCACAATGTGGATGTTTaGTTGCTTCTGGCCCAAACA | + |
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Preference number: 2 (lower is better) Translates to: WGCSSHLRLRVFFQAHWLHNVDV*LLLAQT Trigger: TGTTTGGGCCAGAAGCAAGCAAACATCCACATTGTG...CAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGTTACGAAGATTGTACCATaGCGTGTCAATCTTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GLQFSFEAQGLLPGSLVVTKIVP*RVNLGG Trigger: GCCTCCAAGATTGACACGCCATGGTACAATCTTCGT...AACAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGAGGCAGTTCACAATGTaGATGTTTGCTTGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: WGCSSHLRLRVFFQAHWLRQFTM*MFACFW Trigger: CCAGAAGCAAGCAAACATCCACATTGTGAACTGCCT...CAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGTTTGGGAGGGGATTTTGTCCCTGGCTGAAGCTGGTCCATGCCTGGGTACCTTTTAAGTGTGTATaGGCCACTTTAAGAAACTTC | + |
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Preference number: 2 (lower is better) Translates to: EWFGRGFCPWLKLVHAWVPFKCV*ATLRNF Trigger: GAAGTTTCTTAAAGTGGCTCATACACACTTAAAAGG...TACCCAGGCATGGACCAGCTTCAGCCAGGGACAAAATCCCCTCCCAAACCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTGGATCCATCCCAGAAGTTGCTCATATTCTGTGGCTACACGAACACTGTGCTGCAGTTCTCATTTaGGGCTCAGGGTCTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LLGSIPEVAHILWLHEHCAAVLI*GSGSSS Trigger: GGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGC...ACAGTGTTCGTGTAGCCACAGAATATGAGCAACTTCTGGGATGGATCCAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTGGATCCATCCCAGAAGTTGCTCATATTCTGTGGCTACACGAACACTGTCAGATGGAAGAAGCTTaGCTGGGATCTGCTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLGSIPEVAHILWLHEHCQMEEA*LGSALS Trigger: GCTGAGAGCAGATCCCAGGCAAGCTTCTTCCATCTG...ACAGTGTTCGTGTAGCCACAGAATATGAGCAACTTCTGGGATGGATCCAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CAA 90 bp | AGGTTCTTCTTACGATCACGAAGATTGTACCATGGCGTGTCAATCTaGGAGGCCACCTTAGGATCCCATTTCTCACAGAAATGCTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: RFFLRSRRLYHGVSI*EATLGSHFSQKCCS Trigger: TGAACAGCATTTCTGTGAGAAATGGGATCCTAAGGTGGCCTCCAAGATTGACACGCCATGGTACAATCTTCGTGATCGTAAGAAGAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAAACAGAACCTGTTTGCTGGATCTCAGTTAAGTTCACTTTGCAGTTTTCAGAGGGGATTTTGTCCCTaGCTGAAGCTGGTCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: LKQNLFAGSQLSSLCSFQRGFCP*LKLVHA Trigger: GGCATGGACCAGCTTCAGCCAGGGACAAAATCCCCT...CTGAAAACTGCAAAGTGAACTTAACTGAGATCCAGCAAACAGGTTCTGTTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR CAA 90 bp | GGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATaGGTTGTTGGTAAATTTTATTTCCTCTCAGTTATAGGAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: GLQFSFEAQGLLPGS*VVGKFYFLSVIGVS Trigger: ACTCACTCCTATAACTGAGAGGAAATAAAATTTACCAACAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGCTGAAGCTGGTCCATGCCTGGGTAAACTTTACTTATAAAAGAATACCAAACTGGCTAATATTCTaGGACGCTTTCCAGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PWLKLVHAWVNFTYKRIPNWLIF*DAFQRN Trigger: GTTTCTCTGGAAAGCGTCCCAGAATATTAGCCAGTT...TGGTATTCTTTTATAAGTAAAGTTTACCCAGGCATGGACCAGCTTCAGCCAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGCTTCTAGGAATAAAGAACACATACTCAACTACCTTCAAATGCCAATGGCATGTGACAGAAAACTaGCTAATATTCTGGGACGCT | + |
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Preference number: 2 (lower is better) Translates to: QWLLGIKNTYSTTFKCQWHVTEN*LIFWDA Trigger: AGCGTCCCAGAATATTAGCCAGTTTTCTGTCACATG...CCATTGGCATTTGAAGGTAGTTGAGTATGTGTTCTTTATTCCTAGAAGCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR-3UTR CCA 90 bp | CTTAAACAGAACCTGTTTGCTGGATCTCAGTTAAGTTCACTTTGCAGTTTTCAGAAGCTGGTCCATGCCTaGGTAAACTTTACTTATAAA | + |
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Preference number: 2 (lower is better) Translates to: LKQNLFAGSQLSSLCSFQKLVHA*VNFTYK Trigger: TTTATAAGTAAAGTTTACCCAGGCATGGACCAGCTT...CTGAAAACTGCAAAGTGAACTTAACTGAGATCCAGCAAACAGGTTCTGTTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR CAA 90 bp | GGTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATaGATGGGACAAAACTTATTTGATTATAGTGAAGGATATTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GTHSSSRAPLETSLE*MGQNLFDYSEGYFS Trigger: AGAGAAATATCCTTCACTATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR CAA 90 bp | AAAACTGGTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTaGGAATTGATGGGACAAAACTTATTTGATTATAGTGAAGGATAT | + |
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Preference number: 2 (lower is better) Translates to: KTGTHSSSRAPLETS*ELMGQNLFDYSEGY Trigger: ATATCCTTCACTATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTACCAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR GCA 72 bp | TTGGCCAGGGAATGCTCTCAGGTCCCAGAAAACACCTaGAGTTCCTTGCCAGGTGGCCCCCATAGGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: LARECSQVPENT*SSLPGGPHRQF Trigger: GAACTGCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGCATTCCCTGGCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CCA 72 bp | TCCTTGCCAGGTGGCCCCCATAGGCAGTTCACAATGTaGATGTTTGCTTGCTTCTGGCCCAAACACAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SLPGGPHRQFTM*MFACFWPKHRA Trigger: TGCTCTGTGTTTGGGCCAGAAGCAAGCAAACATCCACATTGTGAACTGCCTATGGGGGCCACCTGGCAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGTTCCAGATGGAAGAAGCTaGCCTGGGATCTGCTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: GLQFSFEAQGLLPGSLVVPDGRS*PGICSQ Trigger: CTGAGAGCAGATCCCAGGCAAGCTTCTTCCATCTGG...AACAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR GCA 72 bp | CTGATCAGGTCAGGCCCACCCAGAACACTCTCCCTTTaGCACATAAAACCGCAAAAGCACAGGAGTGATAGC | + |
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Preference number: 3 (lower is better) Translates to: LIRSGPPRTLSL*HIKPQKHRSDS Trigger: GCTATCACTCCTGTGCTTTTGCGGTTTTATGTGGCAAAGGGAGAGTGTTCTGGGTGGGCCTGACCTGATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CCA 72 bp | AGCTGTGGAGAGTGGTTTGGGAGGGGATTTTGTCCCTaGCTGAAGCTGGTCCATGCCTGGGTAAACTTTACT | + |
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Preference number: 3 (lower is better) Translates to: SCGEWFGRGFCP*LKLVHAWVNFT Trigger: AGTAAAGTTTACCCAGGCATGGACCAGCTTCAGCCAGGGACAAAATCCCCTCCCAAACCACTCTCCACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR TCA 72 bp | CTGAAATCAGTGTTGGCTGGGGCTGCAGTTCTCATTTaGGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: LKSVLAGAAVLI*GSGSSSRLIGC Trigger: ACAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCAGCCAACACTGATTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR GCA 72 bp | GGTACTTACAAGGCTGAAATCAGTGTTGGCTGGGGCTaGAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: GTYKAEISVGWG*SSHLRLRVFFQ Trigger: CTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCAGCCAACACTGATTTCAGCCTTGTAAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CCA 72 bp | TGCTCAGGTACTTACAAGGCTGAAATCAGTGTTGGCTaGGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: CSGTYKAEISVG*GCSSHLRLRVF Trigger: GAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCAGCCAACACTGATTTCAGCCTTGTAAGTACCTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR TCA 72 bp | CCAGCTGGAGAAAACTCTGATTTTAGAGGATATGCCTaGTCAGGTCAGGCCCACCCAGAACACTCTCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: PAGENSDFRGYA*SGQAHPEHSPF Trigger: AAAGGGAGAGTGTTCTGGGTGGGCCTGACCTGATCAGGCATATCCTCTAAAATCAGAGTTTTCTCCAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR CCA 72 bp | GATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATaGAAGAAGCTTGCCTGGGATCTGCTCTCAGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: DQTRLVFIFFTR*KKLAWDLLSAL Trigger: CAAAGCTGAGAGCAGATCCCAGGCAAGCTTCTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CAA 90 bp | GAGTGGTTTGGGAGGGGATTTTGTCCCTGGCTGAAGCTGGTCCATGCCTGGGTAAACAGGTCAACTCTATaGGTAAACAAGCAAGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: EWFGRGFCPWLKLVHAWVNRSTL*VNKQVN Trigger: GTTTACTTGCTTGTTTACCAATAGAGTTGACCTGTT...TACCCAGGCATGGACCAGCTTCAGCCAGGGACAAAATCCCCTCCCAAACCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR CCA 72 bp | TCACAGGTTCTTCTTACGATCACGAAGATTGTACCATaGCGTGTCAATCTTGGAGGCCACCTTAGGATCCCA | + |
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Preference number: 3 (lower is better) Translates to: SQVLLTITKIVP*RVNLGGHLRIP Trigger: TGGGATCCTAAGGTGGCCTCCAAGATTGACACGCCATGGTACAATCTTCGTGATCGTAAGAAGAACCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CAA 90 bp | AGAATGAAACAAGACCTGGACATAACCCTTGTTTGTTTCTCCTTCTTGGATCCAAGGCTGAAATCAGTGTaGGCTGGGGCTGCAGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: RMKQDLDITLVCFSFLDPRLKSV*AGAAVL Trigger: GAGAACTGCAGCCCCAGCCAACACTGATTTCAGCCT...TGGATCCAAGAAGGAGAAACAAACAAGGGTTATGTCCAGGTCTTGTTTCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| 3UTR-3UTR CAA 90 bp | TCATTGGTTGTTGGTAAATTTTATTTCCTCTCAGTTATAGGAGTGAGTTCCTGTAACACCTGCAGTTCCTaGCCAGGTGGCCCCCATAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLVVGKFYFLSVIGVSSCNTCSS*PGGPHR Trigger: CCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTT...ACAGGAACTCACTCCTATAACTGAGAGGAAATAAAATTTACCAACAACCAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| 3UTR CCA 72 bp | AGAAATGCTGTTCAAAAAGATGCTCCCTTCTTCCTCTaGGAAGATCAGACACGCCTGGTGTTCATCTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RNAVQKDAPFFL*EDQTRLVFIFF Trigger: GAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAAGAAGGGAGCATCTTTTTGAACAGCATTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| 3UTR CCA 72 bp | CTTCTTGGATCCATCCCAGAAGTTGCTCATATTCTGTaGCTACACGAACACTGTTCCAGCCAATTTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLGSIPEVAHIL*LHEHCSSQFPF Trigger: AAAAGGAAATTGGCTGGAACAGTGTTCGTGTAGCCACAGAATATGAGCAACTTCTGGGATGGATCCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTGGCTGGGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCCCGGGGGCCCGTCGCTaGGCGAGAGGACGTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QCWLGLQFSFEAQGLLPGPGARR*ARGRRR Trigger: TCGCCGACGTCCTCTCGCTCAGCGACGGGCCCCCGG...GCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCAGCCAACACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTCAGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCATAGGCCCCCAGTCGGAGACGTaGGTCACGAAGCGGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ALRSQKTPAVPCQVAPIGPQSET*VTKRAT Trigger: CGTGGCCCGCTTCGTGACGCACGTCTCCGACTGGGG...GCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCATAGGCAGTTCACCAGCGTGGAGATGGTaGCCAGAGCGCCCCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQKTPAVPCQVAPIGSSPAWRW*PERPSR Trigger: CCGACTGGGGCGCTCTGGCCACCATCTCCACGCTGG...TGAACTGCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGTTTTCCTGCTAATGATTGGCCAGGGAATGCTCTCAGGTCCCAGAAAACACCGGGCCCCAAGACCTaGAGGGACCCAGCCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCFPANDWPGNALRSQKTPGPKT*RDPAGA Trigger: AGCTCCGGCTGGGTCCCTGCAGGTCTTGGGGCCCGG...TGTTTTCTGGGACCTGAGAGCATTCCCTGGCCAATCATTAGCAGGAAAACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCCACCCAGAACACTCTCCCTTTGCCACATAAAACCGCAAAAGCACAGGACACCTGCAGTTCCTTaGCAGGTGGCCCCCATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPPRTLSLCHIKPQKHRTPAVP*QVAPIG Trigger: GCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGT...CCTGTGCTTTTGCGGTTTTATGTGGCAAAGGGAGAGTGTTCTGGGTGGGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGTTTTCCTGCTAATGATTGGCCAGGGAATGCTCTCAGGTCCCAGAAAACAGCACCGCCTCCAGCGTaGAGATGGTGGCCAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SCFPANDWPGNALRSQKTAPPPA*RWWPER Trigger: GCGCTCTGGCCACCATCTCCACGCTGGAGGCGGTGC...TGTTTTCTGGGACCTGAGAGCATTCCCTGGCCAATCATTAGCAGGAAAACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCCACCCAGAACACTCTCCCTTTGCCACATAAAACCGCAAAAGCACAGGGATTCTCCTGCAGGTTaGTCACGGAGAGCTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGPPRTLSLCHIKPQKHRDSPAG*SRRAAA Trigger: CGCTGCAGCTCTCCGTGAGCAACCTGCAGGAGAATC...CCTGTGCTTTTGCGGTTTTATGTGGCAAAGGGAGAGTGTTCTGGGTGGGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR GCA 90 bp | GGGAATGCTCTCAGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCAGCTTGCCTGGGATCTaGTCTCAGCTTTGTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GNALRSQKTPAVPCQVAPSLPGI*SQLCPL Trigger: TAAAGGACAAAGCTGAGAGCAGATCCCAGGCAAGCT...GGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGCATTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTCAGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCATAGGCACGAAGATTGTACCATaGCGTGTCAATCTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRSQKTPAVPCQVAPIGTKIVP*RVNLGG Trigger: GCCTCCAAGATTGACACGCCATGGTACAATCTTCGT...GCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | GGGAATGCTCTCAGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCAGTCCTGATATAGCATaGCTGAGTTCTCTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNALRSQKTPAVPCQVAPSPDIA*LSSLLR Trigger: CCTGAGCAGAGAACTCAGCCATGCTATATCAGGACT...GGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGCATTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCTGAAGCTGGTCCATGCCTGGGTAAACTTTACTTATAAAAGAATACCACCCCAGTCGGAGACGTaGGTCACGAAGCGGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: PWLKLVHAWVNFTYKRIPPQSET*VTKRAT Trigger: CGTGGCCCGCTTCGTGACGCACGTCTCCGACTGGGG...TGGTATTCTTTTATAAGTAAAGTTTACCCAGGCATGGACCAGCTTCAGCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR GCA 90 bp | GGGAATGCTCTCAGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCCACAATGTGGATGTTTaGTTGCTTCTGGCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GNALRSQKTPAVPCQVAPHNVDV*LLLAQT Trigger: TGTTTGGGCCAGAAGCAAGCAAACATCCACATTGTG...GGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCTGAGAGCATTCCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR TCA 90 bp | GCTCCATCTGAGTTTCATCATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCCGGGGGCCCGTCGCTaGGCGAGAGGACGTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: APSEFHHCLSILARFIQKPGARR*ARGRRR Trigger: TCGCCGACGTCCTCTCGCTCAGCGACGGGCCCCCGG...CTTCTGAATAAATCTTGCCAAGATAGACAAACAATGATGAAACTCAGATGGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGCTCAGGAGGCAGCTGTGGTGAGTGATGCACTCTACCAAGCACAGTGGCAGTGGCTTGATTCCTaGCATTTCCTCTTTAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAAQEAAVVSDALYQAQWQWLDS*HFLFKR Trigger: CCTCTTAAAGAGGAAATGTCAGGAATCAAGCCACTG...CCACTGTGCTTGGTAGAGTGCATCACTCACCACAGCTGCCTCCTGAGCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGGATCCATCCCAGAAGTTGCTCATATTCTGTGGCTACACGAACACTGTGGGATAGCCCGGCCATaGCGGTGTCTCCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSIPEVAHILWLHEHCGIARP*RCLQEE Trigger: CTCTTCCTGGAGACACCGCCATGGCCGGGCTATCCC...ACAGTGTTCGTGTAGCCACAGAATATGAGCAACTTCTGGGATGGATCCAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGCTCAGGAGGCAGCTGTGGTGAGTGATGCACTCTACCAAGCACAGTGGCTGTTTCATTCACCTTaGTCACAGTTCCTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QAAQEAAVVSDALYQAQWLFHSP*SQFLTA Trigger: TGCTGTCAGGAACTGTGACCAAGGTGAATGAAACAG...CCACTGTGCTTGGTAGAGTGCATCACTCACCACAGCTGCCTCCTGAGCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| 3UTR CAA 72 bp | GCTGAAATCAGTGTTGGCTGGGGCTGCAGTTCTCATTaGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEISVGWGCSSH*RLRVFFQAHWL Trigger: CAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCAGCCAACACTGATTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCATAGGCAGTTCAGCAAAGAACCAATTATaGCTGGAAGGCCAGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSQKTPAVPCQVAPIGSSAKNQL*LEGQVF Trigger: GAAAACCTGGCCTTCCAGCCATAATTGGTTCTTTGC...TGAACTGCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR TCA 90 bp | GCTCAGGAGGCAGCTGTGGTGAGTGATGCACTCTACCAAGCACAGTGGCTTCTACCTGACAGCATTATGTaGACACAAAGGGGACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQEAAVVSDALYQAQWLLPDSIM*TQRGLC Trigger: ACAAAGTCCCCTTTGTGTTCACATAATGCTGTCAGG...TAGAAGCCACTGTGCTTGGTAGAGTGCATCACTCACCACAGCTGCCTCCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR TCA 90 bp | TCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGGAAGAAGCTTGCCTGGGAGCTGCAGTTCTCATTTaGGGCTCAGGGTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDTPGVHLFHQMEEACLGAAVLI*GSGSSS Trigger: GGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGC...TCCCAGGCAAGCTTCTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCACCATAATGGGGGCCAATGCACCGCCTCCAGCGTaGAGATGGTGGCCAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IVCLSWQDLFRSTIMGANAPPPA*RWWPER Trigger: GCGCTCTGGCCACCATCTCCACGCTGGAGGCGGTGC...ATTGGCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTGGGAAGATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGGAAGGCTCCCTTCTTCCTCTaGGAAGATCAGACACGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWEDQTRLVFIFFTRWKAPFFL*EDQTRL Trigger: CAGGCGTGTCTGATCTTCCCAGAGGAAGAAGGGAGC...CTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCTTCTAGGAATAAAGAACACATACTCAACTACCTTCAAATGCCAATGGGGGATAGCCCGGCCATaGCGGTGTCTCCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QWLLGIKNTYSTTFKCQWGIARP*RCLQEE Trigger: CTCTTCCTGGAGACACCGCCATGGCCGGGCTATCCC...CCATTGGCATTTGAAGGTAGTTGAGTATGTGTTCTTTATTCCTAGAAGCCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCCACCCAGAACACTCTCCCTTTGCCACATAAAACCGCAAAAGCACAGGAGGCAGTTCACAATGTaGATGTTTGCTTGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGPPRTLSLCHIKPQKHRRQFTM*MFACFW Trigger: CCAGAAGCAAGCAAACATCCACATTGTGAACTGCCT...CCTGTGCTTTTGCGGTTTTATGTGGCAAAGGGAGAGTGTTCTGGGTGGGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGGCTTCTAGGAATAAAGAACACATACTCAACTACCTTCAAATGCCAATGGGGGGGCCAATCCTTTTaGACCAGGCTCAGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QWLLGIKNTYSTTFKCQWGGQSF*TRLRQL Trigger: GAGCTGCCTGAGCCTGGTGCAAAAGGATTGGCCCCC...CCATTGGCATTTGAAGGTAGTTGAGTATGTGTTCTTTATTCCTAGAAGCCACTG 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | AGAGCACCACTGGAAACATCTTTGGAATTGATGGGACAAAACTTATTTGATTATCCAGCGTGGAGATGGTaGCCAGAGCGCCCCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPLETSLELMGQNLFDYPAWRW*PERPSR Trigger: CCGACTGGGGCGCTCTGGCCACCATCTCCACGCTGG...ATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | GCTCCATCTGAGTTTCATCATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCCTCCAGCGTGGAGATaGTGGCCAGAGCGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: APSEFHHCLSILARFIQKPPAWR*WPERPS Trigger: ACTGGGGCGCTCTGGCCACCATCTCCACGCTGGAGG...CTTCTGAATAAATCTTGCCAAGATAGACAAACAATGATGAAACTCAGATGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | ATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGGAAGAAGCTTGCCTGGGGGTCAGTGTAGCATATaGATTCTCCTGCAGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRHAWCSSFSPDGRSLPGGQCSI*ILLQVA Trigger: AGCAACCTGCAGGAGAATCCATATGCTACACTGACC...CCCAGGCAAGCTTCTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR GCA 90 bp | AAAACTGGTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATTGGATTCTCCTGCAGGTTaGTCACGGAGAGCTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KTGTHSSSRAPLETSLELDSPAG*SRRAAA Trigger: CGCTGCAGCTCTCCGTGAGCAACCTGCAGGAGAATC...CAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTACCAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR GCA 90 bp | TGCCACATAAAACCGCAAAAGCACAGGAGTGATAGCTCATCGTATTCACAGGTTCAGATGGAAGAAGCTTaGCTGGGATCTGCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CHIKPQKHRSDSSSYSQVQMEEA*LGSALS Trigger: GCTGAGAGCAGATCCCAGGCAAGCTTCTTCCATCTG...AACCTGTGAATACGATGAGCTATCACTCCTGTGCTTTTGCGGTTTTATGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGTTAGAACACTCTCCCTTTaGCACATAAAACCGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLQFSFEAQGLLPGSLVVRTLSL*HIKPQK Trigger: CTTTTGCGGTTTTATGTGGCAAAGGGAGAGTGTTCT...AACAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGTTAAGATCAGACACGCCTaGTGTTCATCTTTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GLQFSFEAQGLLPGSLVVKIRHA*CSSFSP Trigger: TGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTT...AACAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR TCA 90 bp | AAAACTGGTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATTGGGCAGCTGTGGTGAGTaGTGCACTCTACCAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KTGTHSSSRAPLETSLELGSCGE*CTLPST Trigger: TGTGCTTGGTAGAGTGCATCACTCACCACAGCTGCC...CAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTACCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTGGGAAGATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGGAAGGTTTCTTGCAGAAGTTaGTCTGTGCCAAAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWEDQTRLVFIFFTRWKVSCRS*SVPKSW Trigger: CCATGACTTTGGCACAGACCAACTTCTGCAAGAAAC...CTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | TGCCACATAAAACCGCAAAAGCACAGGAGTGATAGCTCATCGTATTCACAGGTTTGGAAGAAGCTTGCCTaGGATCTGCTCTCAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHIKPQKHRSDSSSYSQVWKKLA*DLLSAL Trigger: CAAAGCTGAGAGCAGATCCCAGGCAAGCTTCTTCCA...AACCTGTGAATACGATGAGCTATCACTCCTGTGCTTTTGCGGTTTTATGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTGGGAAGATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGGAAGAGAACCAATTATGGCTaGAAGGCCAGGTTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FLWEDQTRLVFIFFTRWKRTNYG*KARFSS Trigger: AGATGAAAACCTGGCCTTCCAGCCATAATTGGTTCT...CTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCACCATAATGGGGGCCAATAGGGGATTTTGTCCCTaGCTGAAGCTGGTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVCLSWQDLFRSTIMGANRGFCP*LKLVHA Trigger: GGCATGGACCAGCTTCAGCCAGGGACAAAATCCCCT...ATTGGCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTGGGAAGATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGGAAGATCTTTTTCACCAGATaGAAGAAGCTTGCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLWEDQTRLVFIFFTRWKIFFTR*KKLAWD Trigger: ATCCCAGGCAAGCTTCTTCCATCTGGTGAAAAAGAT...CTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTGGGAAGATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGGAAGTTTGTTTCTCCTTCTTaGATCCATCCCAGAAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWEDQTRLVFIFFTRWKFVSPS*IHPRSC Trigger: GCAACTTCTGGGATGGATCCAAGAAGGAGAAACAAA...CTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCACCACTGGAAACATCTTTGGAATTGATGGGACAAAACTTATTTGATTATGATTTTGTCCCTGGCTaGAGCTGGTCCATGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPLETSLELMGQNLFDYDFVPG*SWSMPG Trigger: CCCAGGCATGGACCAGCTTCAGCCAGGGACAAAATC...ATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR GCA 90 bp | TGCCACATAAAACCGCAAAAGCACAGGAGTGATAGCTCATCGTATTCACAGGTTATGTGGATGTTTGCTTaGTTCTGGCCCAAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHIKPQKHRSDSSSYSQVMWMFA*FWPKHR Trigger: TCTGTGTTTGGGCCAGAAGCAAGCAAACATCCACAT...AACCTGTGAATACGATGAGCTATCACTCCTGTGCTTTTGCGGTTTTATGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CCA 90 bp | CTTAAACAGAACCTGTTTGCTGGATCTCAGTTAAGTTCACTTTGCAGTTTTCAGCTGTGGAGAGTGGTTTaGGAGGGGATTTTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKQNLFAGSQLSSLCSFQLWRVV*EGILSL Trigger: CAGGGACAAAATCCCCTCCCAAACCACTCTCCACAG...CTGAAAACTGCAAAGTGAACTTAACTGAGATCCAGCAAACAGGTTCTGTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | TGCCACATAAAACCGCAAAAGCACAGGAGTGATAGCTCATCGTATTCACAGGTTATGTTTGCTTGCTTCTaGCCCAAACACAGAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CHIKPQKHRSDSSSYSQVMFACF*PKHRAS Trigger: AGATGCTCTGTGTTTGGGCCAGAAGCAAGCAAACAT...AACCTGTGAATACGATGAGCTATCACTCCTGTGCTTTTGCGGTTTTATGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGAAACAAGACCTGGACATAACCCTTGTTTGTTTCTCCTTCTTGGATCCAGTAGGTCAGAAGTCCTaGTATAGCATGGCTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RMKQDLDITLVCFSFLDPVGQKS*YSMAEF Trigger: GAACTCAGCCATGCTATATCAGGACTTCTGACCTAC...TGGATCCAAGAAGGAGAAACAAACAAGGGTTATGTCCAGGTCTTGTTTCATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CCA 90 bp | CACCTTAGGATCCCATTTCTCACAGAAATGCTGTTCAAAAAGATGCTCCCTTCTCTGTTTCATTCACCTTaGTCACAGTTCCTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLRIPFLTEMLFKKMLPSLFHSP*SQFLTA Trigger: TGCTGTCAGGAACTGTGACCAAGGTGAATGAAACAG...AGAAGGGAGCATCTTTTTGAACAGCATTTCTGTGAGAAATGGGATCCTAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR TCA 90 bp | AGAATGAAACAAGACCTGGACATAACCCTTGTTTGTTTCTCCTTCTTGGATCCACCTGACAGCATTATGTaGACACAAAGGGGACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RMKQDLDITLVCFSFLDPPDSIM*TQRGLC Trigger: ACAAAGTCCCCTTTGTGTTCACATAATGCTGTCAGG...TGGATCCAAGAAGGAGAAACAAACAAGGGTTATGTCCAGGTCTTGTTTCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR TCA 90 bp | AAAACTGGTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATTGCTTGGTCACAGTTCCTaGCAGCATTATGTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: KTGTHSSSRAPLETSLELLGHSS*QHYVNT Trigger: TGTGTTCACATAATGCTGTCAGGAACTGTGACCAAG...CAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTACCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | AAAACTGGTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATTGGCAAAGAACCAATTATaGCTGGAAGGCCAGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTGTHSSSRAPLETSLELAKNQL*LEGQVF Trigger: GAAAACCTGGCCTTCCAGCCATAATTGGTTCTTTGC...CAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTACCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | CATCATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCACCATAATGGGGGCTGGTGTCACGATTTTTaGTCCACCAAAGTAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HHCLSILARFIQKHHNGGWCHDF*STKVVQ Trigger: CTGGACTACTTTGGTGGACCAAAAATCGTGACACCA...GCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | AGAATGAAACAAGACCTGGACATAACCCTTGTTTGTTTCTCCTTCTTGGATCCATGGTGTCACGATTTTTaGTCCACCAAAGTAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RMKQDLDITLVCFSFLDPWCHDF*STKVVQ Trigger: CTGGACTACTTTGGTGGACCAAAAATCGTGACACCA...TGGATCCAAGAAGGAGAAACAAACAAGGGTTATGTCCAGGTCTTGTTTCATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR TCA 90 bp | CAGTGGCTTCTAGGAATAAAGAACACATACTCAACTACCTTCAAATGCCAATGGAAGGATTCAGTGGCTTaGTTCCTGACATTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QWLLGIKNTYSTTFKCQWKDSVA*FLTFPL Trigger: AAGAGGAAATGTCAGGAATCAAGCCACTGAATCCTT...CCATTGGCATTTGAAGGTAGTTGAGTATGTGTTCTTTATTCCTAGAAGCCACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR GCA 90 bp | ATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCACCATAATGGGGGCCAATGCTGAAGCTGGTCCATaGCTGGGTAAACTTTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: IVCLSWQDLFRSTIMGANAEAGP*LGKLYL Trigger: TAAGTAAAGTTTACCCAGGCATGGACCAGCTTCAGC...ATTGGCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | GCTCCATCTGAGTTTCATCATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGGGTCAGTGTAGCATATaGATTCTCCTGCAGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APSEFHHCLSILARFIQKGQCSI*ILLQVA Trigger: AGCAACCTGCAGGAGAATCCATATGCTACACTGACC...CTTCTGAATAAATCTTGCCAAGATAGACAAACAATGATGAAACTCAGATGGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | CATCATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCACCATAATGGGGGCAGAACCAATTATGGCTaGAAGGCCAGGTTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HHCLSILARFIQKHHNGGRTNYG*KARFSS Trigger: AGATGAAAACCTGGCCTTCCAGCCATAATTGGTTCT...GCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAATGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | AAAACTGGTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATTGAACTGGCTAATATTCTaGGACGCTTTCCAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTGTHSSSRAPLETSLELNWLIF*DAFQRN Trigger: GTTTCTCTGGAAAGCGTCCCAGAATATTAGCCAGTT...CAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTACCAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | CATCATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCACCATAATGGGGGCCATGTGACAGAAAACTaGCTAATATTCTGGGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: HHCLSILARFIQKHHNGGHVTEN*LIFWDA Trigger: AGCGTCCCAGAATATTAGCCAGTTTTCTGTCACATG...GCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAATGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR TCA 90 bp | CTTAAACAGAACCTGTTTGCTGGATCTCAGTTAAGTTCACTTTGCAGTTTTCAGTCTCAGGGTGTCGAATaGATAACGAATGCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKQNLFAGSQLSSLCSFQSQGVE*ITNALQ Trigger: TTGCAAAGCATTCGTTATTCATTCGACACCCTGAGA...CTGAAAACTGCAAAGTGAACTTAACTGAGATCCAGCAAACAGGTTCTGTTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR GCA 90 bp | AGAGCACCACTGGAAACATCTTTGGAATTGATGGGACAAAACTTATTTGATTATGCAGAAGTTGGTCTGTaGCAAAGTCATGGTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAPLETSLELMGQNLFDYAEVGL*QSHGQC Trigger: ACACTGACCATGACTTTGGCACAGACCAACTTCTGC...ATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR TCA 90 bp | CAGTGGCTTCTAGGAATAAAGAACACATACTCAACTACCTTCAAATGCCAATGGCCTTTTAAGTGTGTATaGGCCACTTTAAGAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QWLLGIKNTYSTTFKCQWPFKCV*ATLRNF Trigger: GAAGTTTCTTAAAGTGGCTCATACACACTTAAAAGG...CCATTGGCATTTGAAGGTAGTTGAGTATGTGTTCTTTATTCCTAGAAGCCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | AGAGCACCACTGGAAACATCTTTGGAATTGATGGGACAAAACTTATTTGATTATGTTTCTTGCAGAAGTTaGTCTGTGCCAAAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPLETSLELMGQNLFDYVSCRS*SVPKSW Trigger: CCATGACTTTGGCACAGACCAACTTCTGCAAGAAAC...ATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CCA 90 bp | CAGTGGCTTCTAGGAATAAAGAACACATACTCAACTACCTTCAAATGCCAATGGAAGCTGGTCCATGCCTaGGTAAACTTTACTTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QWLLGIKNTYSTTFKCQWKLVHA*VNFTYK Trigger: TTTATAAGTAAAGTTTACCCAGGCATGGACCAGCTT...CCATTGGCATTTGAAGGTAGTTGAGTATGTGTTCTTTATTCCTAGAAGCCACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR TCA 90 bp | TCATTGGTTGTTGGTAAATTTTATTTCCTCTCAGTTATAGGAGTGAGTTCCTGTTCTCAGGGTGTCGAATaGATAACGAATGCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLVVGKFYFLSVIGVSSCSQGVE*ITNALQ Trigger: TTGCAAAGCATTCGTTATTCATTCGACACCCTGAGA...ACAGGAACTCACTCCTATAACTGAGAGGAAATAAAATTTACCAACAACCAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR TCA 90 bp | ATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCACCATAATGGGGGCCAATAGTTTCACCCTATGTTaGATTAACAATACCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IVCLSWQDLFRSTIMGANSFTLC*INNTQD Trigger: ATCCTGGGTATTGTTAATTCAACATAGGGTGAAACT...ATTGGCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | AGAGCACCACTGGAAACATCTTTGGAATTGATGGGACAAAACTTATTTGATTATATTTTTAAAAAGCTGTaGAGAGTGGTTTGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPLETSLELMGQNLFDYIFKKL*RVVWEG Trigger: CCCCTCCCAAACCACTCTCCACAGCTTTTTAAAAAT...ATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| 3UTR CAA 72 bp | TCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATaGATGGGACAAAACTTATTTGATTATAGTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSRAPLETSLE*MGQNLFDYSEG Trigger: TCCTTCACTATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CCA 90 bp | AGAGCACCACTGGAAACATCTTTGGAATTGATGGGACAAAACTTATTTGATTATACAGAACCTGTTTGCTaGATCTCAGTTAAGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RAPLETSLELMGQNLFDYTEPVC*ISVKFT Trigger: AGTGAACTTAACTGAGATCCAGCAAACAGGTTCTGT...ATAATCAAATAAGTTTTGTCCCATCAATTCCAAAGATGTTTCCAGTGGTGCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS TCA 90 bp | GGTAGAAATAGGGCACGCCGCTGCCCGCGCCCGGGGGCCCGTCGCTaGGCGAGAGGACGTCGGCGAAGGGCCGGCCGCGCACCGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRNRARRCPRPGARR*ARGRRRRAGRAPPP Trigger: TGGAGGCGGTGCGCGGCCGGCCCTTCGCCGACGTCCTCTCGCTCAGCGACGGGCCCCCGGGCGCGGGCAGCGGCGTGCCCTATTTCTACC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS CCA 90 bp | GGGCGGCGAGCAGTGCGCGCGCGGACCCGCGGGATAGCCCGGCCATaGCGGTGTCTCCAGGAAGAGTCCCGGGCCCCAAGACCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRRAVRARTRGIARP*RCLQEESRAPRPAG Trigger: CCCTGCAGGTCTTGGGGCCCGGGACTCTTCCTGGAGACACCGCCATGGCCGGGCTATCCCGCGGGTCCGCGCGCGCACTGCTCGCCGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS GCA 90 bp | GCCTCCAGCGTGGAGATGGTGGCCAGAGCGCCCCAGTCGGAGACGTaGGTCACGAAGCGGGCCACGCGCGCCGCGTCCTCGCGGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASSVEMVARAPQSET*VTKRATRAASSRGG Trigger: ACCACCCCGCGAGGACGCGGCGCGCGTGGCCCGCTTCGTGACGCACGTCTCCGACTGGGGCGCTCTGGCCACCATCTCCACGCTGGAGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS CCA 90 bp | CGTCGGCGAAGGGCCGGCCGCGCACCGCCTCCAGCGTGGAGATGGTaGCCAGAGCGCCCCAGTCGGAGACGTGCGTCACGAAGCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRRRAGRAPPPAWRW*PERPSRRRASRSGP Trigger: TGGCCCGCTTCGTGACGCACGTCTCCGACTGGGGCGCTCTGGCCACCATCTCCACGCTGGAGGCGGTGCGCGGCCGGCCCTTCGCCGACG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS CCA 90 bp | GGACGTCGGCGAAGGGCCGGCCGCGCACCGCCTCCAGCGTGGAGATaGTGGCCAGAGCGCCCCAGTCGGAGACGTGCGTCACGAAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRRRRAGRAPPPAWR*WPERPSRRRASRSG Trigger: CCCGCTTCGTGACGCACGTCTCCGACTGGGGCGCTCTGGCCACCATCTCCACGCTGGAGGCGGTGCGCGGCCGGCCCTTCGCCGACGTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS CCA 90 bp | GCGAGAGGACGTCGGCGAAGGGCCGGCCGCGCACCGCCTCCAGCGTaGAGATGGTGGCCAGAGCGCCCCAGTCGGAGACGTGCGTCACGA | + |
|
Preference number: 5 (lower is better) Translates to: ARGRRRRAGRAPPPA*RWWPERPSRRRASR Trigger: TCGTGACGCACGTCTCCGACTGGGGCGCTCTGGCCACCATCTCCACGCTGGAGGCGGTGCGCGGCCGGCCCTTCGCCGACGTCCTCTCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | GAGTGGTTTGGGAGGGGATTTTGTCCCTGGCTGAAGCTGGTCCATGCCTGGGTAGTTTGGGAGGGGATTTaGTCCCTGGCTGAAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EWFGRGFCPWLKLVHAWVVWEGI*SLAEAG Trigger: ACCAGCTTCAGCCAGGGACAAAATCCCCTCCCAAAC...TACCCAGGCATGGACCAGCTTCAGCCAGGGACAAAATCCCCTCCCAAACCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CAA 90 bp | GGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGTTAACACCTGCAGTTCCTaGCCAGGTGGCCCCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLQFSFEAQGLLPGSLVVNTCSS*PGGPHR Trigger: CCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTT...AACAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | TCAGGCCCACCCAGAACACTCTCCCTTTGCCACATAAAACCGCAAAAGCACAGGGGCTGCAGTTCTCATTaGAGGCTCAGGGTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGPPRTLSLCHIKPQKHRGCSSH*RLRVFF Trigger: GAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCC...CCTGTGCTTTTGCGGTTTTATGTGGCAAAGGGAGAGTGTTCTGGGTGGGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | TCAGGCCCACCCAGAACACTCTCCCTTTGCCACATAAAACCGCAAAAGCACAGGGATCTGCTCTCAGCTTaGTCCTTTACTTGCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPPRTLSLCHIKPQKHRDLLSA*SFTCCV Trigger: CACACAGCAAGTAAAGGACAAAGCTGAGAGCAGATC...CCTGTGCTTTTGCGGTTTTATGTGGCAAAGGGAGAGTGTTCTGGGTGGGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | TCCTGTTTTCCTGCTAATGATTGGCCAGGGAATGCTCTCAGGTCCCAGAAAACACCAGATGGAAGAAGCTaGCCTGGGATCTGCTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCFPANDWPGNALRSQKTPDGRS*PGICSQ Trigger: CTGAGAGCAGATCCCAGGCAAGCTTCTTCCATCTGG...TGTTTTCTGGGACCTGAGAGCATTCCCTGGCCAATCATTAGCAGGAAAACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGTTACTTGCTGTGTGACTTaGACCAAATCACTTCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLQFSFEAQGLLPGSLVVTCCVT*TKSLPL Trigger: GAGGGGAAGTGATTTGGTCAAAGTCACACAGCAAGT...AACAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | AGGTCCCAGAAAACACCTGCAGTTCCTTGCCAGGTGGCCCCCATAGGCAGTTCAAGCCAATTTCCTTTTTaGCTTAAGCTATCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSQKTPAVPCQVAPIGSSSQFPF*LKLSRA Trigger: AGCTCTGGATAGCTTAAGCAAAAAAGGAAATTGGCT...TGAACTGCCTATGGGGGCCACCTGGCAAGGAACTGCAGGTGTTTTCTGGGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTGAAGCTGGTCCATGCCTGGGTAAACTTTACTTATAAAAGAATACCAGCTGTGGAGAGTGGTTaGGGAGGGGATTTTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PWLKLVHAWVNFTYKRIPAVESG*GGDFVP Trigger: AGGGACAAAATCCCCTCCCAAACCACTCTCCACAGC...TGGTATTCTTTTATAAGTAAAGTTTACCCAGGCATGGACCAGCTTCAGCCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CAA 90 bp | TGGGGCTGCAGTTCTCATTTGAGGCTCAGGGTCTTCTTCCAGGCTCATTGGTTGTCCAGGACCCAGATATaGGTTATATTCAACTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WGCSSHLRLRVFFQAHWLSRTQI*VIFNLA Trigger: TGCTAAGTTGAATATAACCAATATCTGGGTCCTGGA...CAACCAATGAGCCTGGAAGAAGACCCTGAGCCTCAAATGAGAACTGCAGCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | CTTAAACAGAACCTGTTTGCTGGATCTCAGTTAAGTTCACTTTGCAGTTTTCAGTGGGGGCCAATCCTTTaGCACCAGGCTCAGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKQNLFAGSQLSSLCSFQWGPIL*HQAQAA Trigger: AGCTGCCTGAGCCTGGTGCAAAAGGATTGGCCCCCA...CTGAAAACTGCAAAGTGAACTTAACTGAGATCCAGCAAACAGGTTCTGTTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CAA 90 bp | GCTCAGGAGGCAGCTGTGGTGAGTGATGCACTCTACCAAGCACAGTGGCTTCTATCAGTTAAGTTCACTTaGCAGTTTTCAGACACAATG | + |
|
Preference number: 5 (lower is better) Translates to: AQEAAVVSDALYQAQWLLSVKFT*QFSDTM Trigger: CATTGTGTCTGAAAACTGCAAAGTGAACTTAACTGA...TAGAAGCCACTGTGCTTGGTAGAGTGCATCACTCACCACAGCTGCCTCCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CAA 90 bp | TTCCTCTGGGAAGATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGGAAGAGCTTTGTCCTTTACTaGCTGTGTGACTTTGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: FLWEDQTRLVFIFFTRWKSFVLY*LCDFDQ Trigger: TTGGTCAAAGTCACACAGCAAGTAAAGGACAAAGCT...CTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | TGCCACATAAAACCGCAAAAGCACAGGAGTGATAGCTCATCGTATTCACAGGTTAATGTGGATGTTTGCTaGCTTCTGGCCCAAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: CHIKPQKHRSDSSSYSQVNVDVC*LLAQTQ Trigger: CTGTGTTTGGGCCAGAAGCAAGCAAACATCCACATT...AACCTGTGAATACGATGAGCTATCACTCCTGTGCTTTTGCGGTTTTATGTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CAA 90 bp | CACCTTAGGATCCCATTTCTCACAGAAATGCTGTTCAAAAAGATGCTCCCTTCTTCACAATGTGGATGTTaGCTTGCTTCTGGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLRIPFLTEMLFKKMLPSSQCGC*LASGPN Trigger: GTTTGGGCCAGAAGCAAGCAAACATCCACATTGTGA...AGAAGGGAGCATCTTTTTGAACAGCATTTCTGTGAGAAATGGGATCCTAAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | CACCTTAGGATCCCATTTCTCACAGAAATGCTGTTCAAAAAGATGCTCCCTTCTGATCCATCCCAGAAGTaGCTCATATTCTGTGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: HLRIPFLTEMLFKKMLPSDPSQK*LIFCGY Trigger: GTAGCCACAGAATATGAGCAACTTCTGGGATGGATC...AGAAGGGAGCATCTTTTTGAACAGCATTTCTGTGAGAAATGGGATCCTAAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CAA 90 bp | AACACAGAGCATCTCTCTGACTTAGTCTTCTGGAACCAGCTGGAGAAAACTCTGAACACAAAGGGGACTTaGTGGATCAAATCCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NTEHLSDLVFWNQLEKTLNTKGT*WIKSMF Trigger: AAACATGGATTTGATCCACAAAGTCCCCTTTGTGTT...CAGAGTTTTCTCCAGCTGGTTCCAGAAGACTAAGTCAGAGAGATGCTCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
||
| CDS-3UTR CAA 90 bp | AAAACTGGTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATTGTCTGTTTCATTCACCTaGGTCACAGTTCCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: KTGTHSSSRAPLETSLELSVSFT*VTVPDS Trigger: GCTGTCAGGAACTGTGACCAAGGTGAATGAAACAGA...CAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTACCAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
||
| CDS-3UTR CAA 90 bp | TTCCTCTGGGAAGATCAGACACGCCTGGTGTTCATCTTTTTCACCAGATGGAAGTTCCAGGCTCATTGGTaGTTGGTAAATTTTATTTCC | + |
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Preference number: 5 (lower is better) Translates to: FLWEDQTRLVFIFFTRWKFQAHW*LVNFIS Trigger: GGAAATAAAATTTACCAACAACCAATGAGCCTGGAA...CTTCCATCTGGTGAAAAAGATGAACACCAGGCGTGTCTGATCTTCCCAGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | TGCCACATAAAACCGCAAAAGCACAGGAGTGATAGCTCATCGTATTCACAGGTTGCCGATTATAATCGCTaGATGAGGCTATCAGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: CHIKPQKHRSDSSSYSQVADYNR*MRLSGN Trigger: ATTACCTGATAGCCTCATCAAGCGATTATAATCGGC...AACCTGTGAATACGATGAGCTATCACTCCTGTGCTTTTGCGGTTTTATGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS CCA 90 bp | TCCACAAGATGTCTTCCAGTGAACTGTGACATTATAATATTCTTCTaGTGTCACGATTTTTGGTCCACCAAAGTAGTCCAGGACCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: STRCLPVNCDIIIFF*CHDFWSTKVVQDPD Trigger: ATCTGGGTCCTGGACTACTTTGGTGGACCAAAAATCGTGACACCAGAAGAATATTATAATGTCACAGTTCACTGGAAGACATCTTGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | CATCATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCACCATAATGGGGGCTCAAATCCATGTTTCTaGCAGAAGTTGGTCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: HHCLSILARFIQKHHNGGSNPCF*QKLVCA Trigger: GGCACAGACCAACTTCTGCAAGAAACATGGATTTGA...GCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CAA 90 bp | AGAATGAAACAAGACCTGGACATAACCCTTGTTTGTTTCTCCTTCTTGGATCCATCAAATCCATGTTTCTaGCAGAAGTTGGTCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: RMKQDLDITLVCFSFLDPSNPCF*QKLVCA Trigger: GGCACAGACCAACTTCTGCAAGAAACATGGATTTGA...TGGATCCAAGAAGGAGAAACAAACAAGGGTTATGTCCAGGTCTTGTTTCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | AAAACTGGTACTCATTCCTCTTCAAGAGCACCACTGGAAACATCTTTGGAATTGAAGCTATTAAGAGATTaGGGGCAGTTGAGGAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: KTGTHSSSRAPLETSLELKLLRD*GQLRKP Trigger: AGGCTTCCTCAACTGCCCCAAATCTCTTAATAGCTT...CAATTCCAAAGATGTTTCCAGTGGTGCTCTTGAAGAGGAATGAGTACCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CAA 90 bp | AGAAATGCTGTTCAAAAAGATGCTCCCTTCTTCCTCTGGGAAGATCAGACACGCCAGGCTCATTGGTTGTaGGTAAATTTTATTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: RNAVQKDAPFFLWEDQTRQAHWL*VNFISS Trigger: AGAGGAAATAAAATTTACCAACAACCAATGAGCCTG...GCGTGTCTGATCTTCCCAGAGGAAGAAGGGAGCATCTTTTTGAACAGCATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS TCA 90 bp | ACCAATTATGGCTGGAAGGCCAGGTTTTCATCTCAGGGTGTCGAATaGATAACGAATGCTTTGCAATATCCATTTCTGTTTCATTCACCT | + |
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Preference number: 5 (lower is better) Translates to: TNYGWKARFSSQGVE*ITNALQYPFLFHSP Trigger: AGGTGAATGAAACAGAAATGGATATTGCAAAGCATTCGTTATTCATTCGACACCCTGAGATGAAAACCTGGCCTTCCAGCCATAATTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS TCA 90 bp | GAAGCTGAACTAGATGGTCTCCACAAGATGTCTTCCAGTGAACTGTaGCATTATAATATTCTTCTGGTGTCACGATTTTTGGTCCACCAA | + |
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Preference number: 5 (lower is better) Translates to: EAELDGLHKMSSSEL*HYNILLVSRFLVHQ Trigger: TTGGTGGACCAAAAATCGTGACACCAGAAGAATATTATAATGTCACAGTTCACTGGAAGACATCTTGTGGAGACCATCTAGTTCAGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGCTTCTAGGAATAAAGAACACATACTCAACTACCTTCAAATGCCAATGGAACACAAAGGGGACTTaGTGGATCAAATCCATGTTT | + |
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Preference number: 5 (lower is better) Translates to: QWLLGIKNTYSTTFKCQWNTKGT*WIKSMF Trigger: AAACATGGATTTGATCCACAAAGTCCCCTTTGTGTT...CCATTGGCATTTGAAGGTAGTTGAGTATGTGTTCTTTATTCCTAGAAGCCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS CCA 90 bp | CCAGTGAACTGTGACATTATAATATTCTTCTGGTGTCACGATTTTTaGTCCACCAAAGTAGTCCAGGACCCAGATATTGGTTATATTCAA | + |
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Preference number: 5 (lower is better) Translates to: PVNCDIIIFFWCHDF*STKVVQDPDIGYIQ Trigger: TTGAATATAACCAATATCTGGGTCCTGGACTACTTTGGTGGACCAAAAATCGTGACACCAGAAGAATATTATAATGTCACAGTTCACTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS-3UTR CAA 90 bp | TCATTGGTTGTTGGTAAATTTTATTTCCTCTCAGTTATAGGAGTGAGTTCCTGTGGACATAACCCTTGTTaGTTTCTCCTTCTTGGATCC | + |
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Preference number: 5 (lower is better) Translates to: SLVVGKFYFLSVIGVSSCGHNPC*FLLLGS Trigger: GGATCCAAGAAGGAGAAACAAACAAGGGTTATGTCC...ACAGGAACTCACTCCTATAACTGAGAGGAAATAAAATTTACCAACAACCAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS CCA 90 bp | TCACTGAACTGTGACATTATAATATTCTTCTGGTGTCACGATTTTTaGTCCACCAAAGTAGTCCAGGACCCAGATATTGGTTATATTCAA | + |
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Preference number: 5 (lower is better) Translates to: SLNCDIIIFFWCHDF*STKVVQDPDIGYIQ Trigger: TTGAATATAACCAATATCTGGGTCCTGGACTACTTTGGTGGACCAAAAATCGTGACACCAGAAGAATATTATAATGTCACAGTTCAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CAA 90 bp | GCTCCATCTGAGTTTCATCATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGTCCAGGACCCAGATATaGGTTATATTCAACTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: APSEFHHCLSILARFIQKSRTQI*VIFNLA Trigger: TGCTAAGTTGAATATAACCAATATCTGGGTCCTGGA...CTTCTGAATAAATCTTGCCAAGATAGACAAACAATGATGAAACTCAGATGGAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS-3UTR CAA 90 bp | ATTGTTTGTCTATCTTGGCAAGATTTATTCAGAAGCACCATAATGGGGGCCAATAACAGGTCAACTCTATaGGTAAACAAGCAAGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: IVCLSWQDLFRSTIMGANNRSTL*VNKQVN Trigger: GTTTACTTGCTTGTTTACCAATAGAGTTGACCTGTT...ATTGGCCCCCATTATGGTGCTTCTGAATAAATCTTGCCAAGATAGACAAACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370509.5 |
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| CDS GCA 72 bp | GTGGAGATGGTGGCCAGAGCGCCCCAGTCGGAGACGTaGGTCACGAAGCGGGCCACGCGCGCCGCGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VEMVARAPQSET*VTKRATRAASS Trigger: CGAGGACGCGGCGCGCGTGGCCCGCTTCGTGACGCACGTCTCCGACTGGGGCGCTCTGGCCACCATCTCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS CCA 72 bp | GCAGTGCGCGCGCGGACCCGCGGGATAGCCCGGCCATaGCGGTGTCTCCAGGAAGAGTCCCGGGCCCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: AVRARTRGIARP*RCLQEESRAPR Trigger: TCTTGGGGCCCGGGACTCTTCCTGGAGACACCGCCATGGCCGGGCTATCCCGCGGGTCCGCGCGCGCACTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS TCA 72 bp | TCATTCACCTTGGTCACAGTTCCTGACAGCATTATGTaGACACAAAGGGGACTTTGTGGATCAAATCCATGT | + |
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Preference number: 6 (lower is better) Translates to: SFTLVTVPDSIM*TQRGLCGSNPC Trigger: ACATGGATTTGATCCACAAAGTCCCCTTTGTGTTCACATAATGCTGTCAGGAACTGTGACCAAGGTGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS TCA 72 bp | ATCCATTTCTGTTTCATTCACCTTGGTCACAGTTCCTaGCAGCATTATGTGAACACAAAGGGGACTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: IHFCFIHLGHSS*QHYVNTKGTLW Trigger: CCACAAAGTCCCCTTTGTGTTCACATAATGCTGTCAGGAACTGTGACCAAGGTGAATGAAACAGAAATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS TCA 72 bp | GGCTGGAAGGCCAGGTTTTCATCTCAGGGTGTCGAATaGATAACGAATGCTTTGCAATATCCATTTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GWKARFSSQGVE*ITNALQYPFLF Trigger: AAACAGAAATGGATATTGCAAAGCATTCGTTATTCATTCGACACCCTGAGATGAAAACCTGGCCTTCCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS GCA 72 bp | TGGATCAAATCCATGTTTCTTGCAGAAGTTGGTCTGTaGCAAAGTCATGGTCAGTGTAGCATATGGATTCTC | + |
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Preference number: 6 (lower is better) Translates to: WIKSMFLAEVGL*QSHGQCSIWIL Trigger: GAGAATCCATATGCTACACTGACCATGACTTTGGCACAGACCAACTTCTGCAAGAAACATGGATTTGATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370509.5 ENST00000466652.2 |
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| CDS CCA 72 bp | TGTCTTCCAGTGAACTGTGACATTATAATATTCTTCTaGTGTCACGATTTTTGGTCCACCAAAGTAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: CLPVNCDIIIFF*CHDFWSTKVVQ Trigger: CTGGACTACTTTGGTGGACCAAAAATCGTGACACCAGAAGAATATTATAATGTCACAGTTCACTGGAAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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| CDS TCA 72 bp | CTAGATGGTCTCCACAAGATGTCTTCCAGTGAACTGTaGCATTATAATATTCTTCTGGTGTCACGATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LDGLHKMSSSEL*HYNILLVSRFL Trigger: CAAAAATCGTGACACCAGAAGAATATTATAATGTCACAGTTCACTGGAAGACATCTTGTGGAGACCATCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466652.2 |
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