RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CREBRF (Homo sapiens)

Ensembl gene IDs: ENSG00000164463

Ensembl transcript IDs: ENST00000296953.6, ENST00000517882.1, ENST00000520420.5, ENST00000520464.1, ENST00000522692.5, ENST00000523161.1

Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACTGTGTGAGACTTATTTGTCATGATCCAAGGGAAGAACAAGACTaGAGTTCTGTGCAAAGTTGTGGAAATGGCCTCAGTTCCATGGGA +
Preference number: 1 (lower is better)
Translates to: HCVRLICHDPREEQD*SSVQSCGNGLSSMG
Trigger: TCCCATGGAACTGAGGCCATTTCCACAACTTTGCACAGAACTGCAGTCTTGTTCTTCCCTTGGATCATGACAAATAAGTCTCACACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CCA 90 bp TCCAAGGGAAGAACAAGACTGCAGTTCTGTGCAAAGTTGTGGAAATaGCCTCAGTTCCATGGGAAATGGTATTCCACAACAGACTTCACT +
Preference number: 1 (lower is better)
Translates to: SKGRTRLQFCAKLWK*PQFHGKWYSTTDFT
Trigger: AGTGAAGTCTGTTGTGGAATACCATTTCCCATGGAACTGAGGCCATTTCCACAACTTTGCACAGAACTGCAGTCTTGTTCTTCCCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR TCA 90 bp CGCAACTATGCAAAAGAGGTTGCCACATTGTATGAACAAATGCTTTaGATTCTTGCCCTTCCACTCTTCTCTTGTGACTTCTGTGCTGTC +
Preference number: 1 (lower is better)
Translates to: RNYAKEVATLYEQML*ILALPLFSCDFCAV
Trigger: GACAGCACAGAAGTCACAAGAGAAGAGTGGAAGGGCAAGAATTCAAAGCATTTGTTCATACAATGTGGCAACCTCTTTTGCATAGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR GCA 90 bp GACTTATTTGTCATGATCCAAGGGAAGAACAAGACTGCAGTTCTGTaGAAAGTTGTGGAAATGGCCTCAGTTCCATGGGAAATGGTATTC +
Preference number: 1 (lower is better)
Translates to: DLFVMIQGKNKTAVL*KVVEMASVPWEMVF
Trigger: GAATACCATTTCCCATGGAACTGAGGCCATTTCCACAACTTTGCACAGAACTGCAGTCTTGTTCTTCCCTTGGATCATGACAAATAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR GCA 90 bp TCCTACGCAACTATGCAAAAGAGGTTGCCACATTGTATGAACAAATaGTTTGAATTCTTGCCCTTCCACTCTTCTCTTGTGACTTCTGTG +
Preference number: 1 (lower is better)
Translates to: SYATMQKRLPHCMNK*FEFLPFHSSLVTSV
Trigger: CACAGAAGTCACAAGAGAAGAGTGGAAGGGCAAGAATTCAAAGCATTTGTTCATACAATGTGGCAACCTCTTTTGCATAGTTGCGTAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CCA 90 bp GTGGCACCCAATTCAAAACTCAGACAAGATCTTAACAAGAGCGACTaGACAGCATGCTTTCATATGGAGACAAACTCTATAAAGAATCCA +
Preference number: 1 (lower is better)
Translates to: VAPNSKLRQDLNKSD*TACFHMETNSIKNP
Trigger: TGGATTCTTTATAGAGTTTGTCTCCATATGAAAGCATGCTGTCCAGTCGCTCTTGTTAAGATCTTGTCTGAGTTTTGAATTGGGTGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR GCA 90 bp AATTCAAAACTCAGACAAGATCTTAACAAGAGCGACTGGACAGCATaGTTTCATATGGAGACAAACTCTATAAAGAATCCAGTGTATCTG +
Preference number: 1 (lower is better)
Translates to: NSKLRQDLNKSDWTA*FHMETNSIKNPVYL
Trigger: CAGATACACTGGATTCTTTATAGAGTTTGTCTCCATATGAAAGCATGCTGTCCAGTCGCTCTTGTTAAGATCTTGTCTGAGTTTTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CCA 90 bp GACAAGAATCATACATGGTACAGTAGAACAAGCAATTATATTGACTaGAAAAGTGTGGCACCCAATTCAAAACTCAGACAAGATCTTAAC +
Preference number: 1 (lower is better)
Translates to: DKNHTWYSRTSNYID*KSVAPNSKLRQDLN
Trigger: GTTAAGATCTTGTCTGAGTTTTGAATTGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTATGATTCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR TCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGCTGGGATTACTAACGTaGGCCACTGCGCCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: SAMVRCQLTATSASWVQVLGLLT*ATAPGP
Trigger: AGGGCCAGGCGCAGTGGCTCACGTTAGTAATCCCAG...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
3UTR-3UTR CCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGAACCTCTGGAGTAGCTaGGATTACAGATGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: SAMVRCQLTATSASWVQVNLWSS*DYRCVP
Trigger: TGGCACGCATCTGTAATCCCAGCTACTCCAGAGGTT...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
3UTR-3UTR TCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGAAATGCTCAAGAGAGTaGCAAAACAGGTCACTTAAC +
Preference number: 2 (lower is better)
Translates to: SAMVRCQLTATSASWVQVKCSRE*QNRSLN
Trigger: GTTAAGTGACCTGTTTTGTCACTCTCTTGAGCATTT...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522692.5
3UTR-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAAGCGACTGGACAGCATaGTTTCATATGGAGACAAAC +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPESDWTA*FHMETN
Trigger: GTTTGTCTCCATATGAAAGCATGCTGTCCAGTCGCT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGAGGTGATTTTCACCTaGTTGCAAAACTGCCATAGT +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEEVIFT*LQNCHS
Trigger: ACTATGGCAGTTTTGCAATCAGGTGAAAATCACCTC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAATCATCTGTTTAGCGTaGATGTACAAACCAGGTACA +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEIICLA*MYKPGT
Trigger: TGTACCTGGTTTGTACATTCACGCTAAACAGATGAT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAAACAATGGGTTTACTTaGGGTGAATTCACAATGCCT +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPENNGFT*GEFTMP
Trigger: AGGCATTGTGAATTCACCTCAAGTAAACCCATTGTT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATTACAATGGATAACGTaGCAAAACGCAGACATTTCT +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPELQWIT*QNADIS
Trigger: AGAAATGTCTGCGTTTTGTCACGTTATCCATTGTAA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATTAAACCATCAGACTTaGGCTTATCATCTGTTTAGC +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPELNHQT*AYHLFS
Trigger: GCTAAACAGATGATAAGCTCAAGTCTGATGGTTTAA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATTCTGGACTTCATTATaGGCTATCTGTATACCATGT +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEFWTSL*AICIPC
Trigger: ACATGGTATACAGATAGCTCATAATGAAGTCCAGAA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGCCCACAGGCACAAGTaGTGGGTGTGCCATATACAA +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPAHRHK*WVCHIQ
Trigger: TTGTATATGGCACACCCAGCACTTGTGCCTGTGGGC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAAGCAATTATATTGACTaGAAAAGTGTGGCACCCAAT +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPESNYID*KSVAPN
Trigger: ATTGGGTGCCACACTTTTCCAGTCAATATAATTGCT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAACAATCGCAATAATGTaGAAGTATTTGTCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPETIAIM*KYLSSS
Trigger: GGAAGAAGACAAATACTTGCACATTATTGCGATTGT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGAGGTGAATTCACAATaGCTTCACTTAAAAGTAAGA +
Preference number: 2 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEEVNSQ*LHLKVR
Trigger: TCTTACTTTTAAGTGAAGGCATTGTGAATTCACCTC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR GCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTGCAAGCCTGTGTTTTaGCTTCTCCAACCTAAAAAG +
Preference number: 2 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSCKPVF*LLQPKK
Trigger: CTTTTTAGGTTGGAGAAGGCAAAACACAGGCTTGCA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACTAGACGGTTTTAAATaGCACAGAGTCCCCTGGTTA +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPLDGFK*HRVPWL
Trigger: TAACCAGGGGACTCTGTGGCATTTAAAACCGTCTAG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCACAGGCACAAGTGCTaGGTGTGCCATATACAAGTG +
Preference number: 2 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYHRHKC*VCHIQV
Trigger: CACTTGTATATGGCACACCCAGCACTTGTGCCTGTG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGTAAGAGAGACAGGATaGAAAAATCTGTGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPVRETG*KNLWGK
Trigger: CTTCCCCCACAGATTTTTCCATCCTGTCTCTCTTAC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CAA 90 bp ATGATAGCATTACAAACAGGATCCTACGCAACTATGCAAAAGAGGTaGCCACATTGTATGAACAAATGCTTTGAATTCTTGCCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: MIALQTGSYATMQKR*PHCMNKCFEFLPFH
Trigger: GTGGAAGGGCAAGAATTCAAAGCATTTGTTCATACAATGTGGCAACCTCTTTTGCATAGTTGCGTAGGATCCTGTTTGTAATGCTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR TCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATGGGTTTACTTGAGGTaGATTCACAATGCCTTCACT +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPWVYLR*IHNAFT
Trigger: AGTGAAGGCATTGTGAATTCACCTCAAGTAAACCCA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACACAAGTGCTGGGTGTaGCATATACAAGTGAGATTA +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPHKCWV*HIQVRL
Trigger: TAATCTCACTTGTATATGGCACACCCAGCACTTGTG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACTTAACAAGAGCGACTaGACAGCATGCTTTCATATG +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPLNKSD*TACFHM
Trigger: CATATGAAAGCATGCTGTCCAGTCGCTCTTGTTAAG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CAA 90 bp ACCGAACCTAGTTCACCCAAACTTGGCACATTGAAATACCCAACTTaGATGTTCTTCACTAGTTACCAAGTCTTCAATTCCAAAATACTG +
Preference number: 2 (lower is better)
Translates to: TEPSSPKLGTLKYPT*MFFTSYQVFNSKIL
Trigger: CAGTATTTTGGAATTGAAGACTTGGTAACTAGTGAAGAACATCAAAGTTGGGTATTTCAATGTGCCAAGTTTGGGTGAACTAGGTTCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACCAACTTATCTACTATaGAAGCGAACTAGAGGAACA +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPPTYLL*KRTRGT
Trigger: TGTTCCTCTAGTTCGCTTCCATAGTAGATAAGTTGG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGGATGGAAAAATCTGTaGGGGAAGGTTTATAATGCT +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPGWKNL*GKVYNA
Trigger: AGCATTATAAACCTTCCCCCACAGATTTTTCCATCC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CAA 90 bp GAAAGGACAAGAATCATACATGGTACAGTAGAACAAGCAATTATATaGACTGGAAAAGTGTGGCACCCAATTCAAAACTCAGACAAGATC +
Preference number: 2 (lower is better)
Translates to: ERTRIIHGTVEQAII*TGKVWHPIQNSDKI
Trigger: GATCTTGTCTGAGTTTTGAATTGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTATGATTCTTGTCCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACATAGAAAAATCTTGTaGATCACAGTTCAGCTAAGG +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPHRKIL*ITVQLR
Trigger: CCTTAGCTGAACTGTGATGCACAAGATTTTTCTATG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATAATGAACATCTAATATaGCCCACAGGCACAAGTGCT +
Preference number: 2 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYNEHLI*PTGTSA
Trigger: AGCACTTGTGCCTGTGGGCCATATTAGATGTTCATT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAAAACTTTACTTAGACTaGCAGTTTGCCATATCAGTT +
Preference number: 2 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPKLYLD*QFAISV
Trigger: AACTGATATGGCAAACTGCCAGTCTAAGTAAAGTTT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATGTTTGCCATATCAGTTaGATTTGTCTTTGGTACAAA +
Preference number: 2 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYVCHIS*ICLWYK
Trigger: TTTGTACCAAAGACAAATGCAACTGATATGGCAAAC...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATGTATCATGTAAGCTGTaGAAAACTTTACTTAGACTG +
Preference number: 2 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYVSCKL*KTLLRL
Trigger: CAGTCTAAGTAAAGTTTTGCACAGCTTACATGATAC...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CAA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATCATATACTTCCAACTaGCAAGCCTGTGTTTTGCCT +
Preference number: 3 (lower is better)
Translates to: TKGEGQDIVISPAPIHPESYTSN*QACVLP
Trigger: AGGCAAAACACAGGCTTGCAAGTTGGAAGTATATGA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CAA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGAACAAGCAATTATATaGACTGGAAAAGTGTGGCAC +
Preference number: 3 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEEQAII*TGKVWH
Trigger: GTGCCACACTTTTCCAGTCAATATAATTGCTTGTTC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CAA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAAGCAACATTGTTCATTaGTTACTGGGTGTTCTAGAT +
Preference number: 3 (lower is better)
Translates to: TKGEGQDIVISPAPIHPESNIVH*LLGVLD
Trigger: ATCTAGAACACCCAGTAACAAATGAACAATGTTGCT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CCA 72 bp TATATCATCTTGAGCTCTGACAATGAACATCTAATATaGCCCACAGGCACAAGTGCTGGGTGTGCCATATAC +
Preference number: 3 (lower is better)
Translates to: YIILSSDNEHLI*PTGTSAGCAIY
Trigger: GTATATGGCACACCCAGCACTTGTGCCTGTGGGCCATATTAGATGTTCATTGTCAGAGCTCAAGATGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CCA 72 bp AGAACAAGACTGCAGTTCTGTGCAAAGTTGTGGAAATaGCCTCAGTTCCATGGGAAATGGTATTCCACAACA +
Preference number: 3 (lower is better)
Translates to: RTRLQFCAKLWK*PQFHGKWYSTT
Trigger: TGTTGTGGAATACCATTTCCCATGGAACTGAGGCCATTTCCACAACTTTGCACAGAACTGCAGTCTTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR GCA 72 bp AGACACACTCTGTCAAGACTTCATATACTTCCAACTTaGAAGCCTGTGTTTTGCCTTCTCCAACCTAAAAAG +
Preference number: 3 (lower is better)
Translates to: RHTLSRLHILPT*KPVFCLLQPKK
Trigger: CTTTTTAGGTTGGAGAAGGCAAAACACAGGCTTGCAAGTTGGAAGTATATGAAGTCTTGACAGAGTGTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCACACATAGAAAAATCTaGTGCATCACAGTTCAGCTA +
Preference number: 3 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSTHRKI*CITVQL
Trigger: TAGCTGAACTGTGATGCACAAGATTTTTCTATGTGT...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAATAATGTGCAAGTATTaGTCTTCTTCCGGTCAAGTA +
Preference number: 3 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPIMCKY*SSSGQV
Trigger: TACTTGACCGGAAGAAGACAAATACTTGCACATTAT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAAGTTTGCCATATCAGTaGCATTTGTCTTTGGTACAA +
Preference number: 3 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPSLPYQ*HLSLVQ
Trigger: TTGTACCAAAGACAAATGCAACTGATATGGCAAACT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CCA 72 bp CATACATGGTACAGTAGAACAAGCAATTATATTGACTaGAAAAGTGTGGCACCCAATTCAAAACTCAGACAA +
Preference number: 3 (lower is better)
Translates to: HTWYSRTSNYID*KSVAPNSKLRQ
Trigger: TTGTCTGAGTTTTGAATTGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATTACTTGCACAGACATTaGTGTGTGTGTGTGTATATA +
Preference number: 3 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYYLHRH*CVCVYI
Trigger: TATATACACACACACACACAAATGTCTGTGCAAGTA...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CCA 72 bp GTCATGAAGGATATAGGAAAGGACAAGAATCATACATaGTACAGTAGAACAAGCAATTATATTGACTGGAAA +
Preference number: 3 (lower is better)
Translates to: VMKDIGKDKNHT*YSRTSNYIDWK
Trigger: TTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTATGATTCTTGTCCTTTCCTATATCCTTCATGAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGGGGCGGCTCAGGGACTaGGTCCGGTTCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVGRLRD*VRFRCR
Trigger: CCTGCAGCGGAACCGGACCCAGTCCCTGAGCCGCCC...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTGGGTCCGGTTCCGCTaGAGGGGCCACGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSWVRFR*RGHGPS
Trigger: AGAGGGGCCGTGGCCCCTGCAGCGGAACCGGACCCA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCGGGCGGCTCAGGGACTaGGTCCGGTTCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSGRLRD*VRFRCR
Trigger: CCTGCAGCGGAACCGGACCCAGTCCCTGAGCCGCCC...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGTGTTCCGAAAAGGTGTaGCTTCGAAAGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVCSEKV*LRKASP
Trigger: CGGGGATGCCTTTCGAAGCCACACCTTTTCGGAACA...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGAAGGCAAAGCGGGAGTaGCATGACCTTGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVKAKRE*HDLEEA
Trigger: AGCCTCTTCAAGGTCATGCCACTCCCGCTTTGCCTT...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAACACGGCCCCTCTCCATaGTGCCTCGGGTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEHGPSP*CLGFVL
Trigger: CAAAACAAACCCGAGGCAGCATGGAGAGGGGCCGTG...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGAAAGGGACCTCAGCCTaGAGAGTCTTAGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVKGTSA*RVLEEH
Trigger: GTGTTCTTCTAAGACTCTGCAGGCTGAGGTCCCTTT...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGTTGTCTCTTTGCCACTaGACCACAGTAGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVLSLCH*TTVAGV
Trigger: AACACCTGCTACTGTGGTGCAGTGGCAAAGAGACAA...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGCTGAGACTGATGTACTaGCAGAAAGACTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVLRLMY*QKDCCS
Trigger: AGAGCAGCAGTCTTTCTGCCAGTACATCAGTCTCAG...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR TCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGTGTTGGTCTTCACCATaGTTTGTGTGCTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVCWSSP*FVCLKW
Trigger: CCACTTCAAGCACACAAATCATGGTGAAGACCAACA...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTTGGGTCCGGTTCCGCTaGAGGGGCCACGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAWVRFR*RGHGPS
Trigger: AGAGGGGCCGTGGCCCCTGCAGCGGAACCGGACCCA...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGACACACAGGAGCAGCTaGTCTGCTTGTGATCTTTTT +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVTHRSS*SACDLF
Trigger: AAAAAGATCACAAGCAGAGCAGCTGCTCCTGTGTGT...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGACAGTTCATGCTCACTaGCGAATCCTTCATCATGGT +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVTVHAH*RILHHG
Trigger: ACCATGATGAAGGATTCGGCAGTGAGCATGAACTGT...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATGTTCCGAAAAGGTGTaGCTTCGAAAGGCATCCCCG +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPECSEKV*LRKASP
Trigger: CGGGGATGCCTTTCGAAGCCACACCTTTTCGGAACA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGAGGACTGCATTTAGTTaGCTGTTCACCCAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVRTAFS*LFTQVV
Trigger: GACAACTTGGGTGAACAGCCAACTAAATGCAGTCCT...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAACTACAAGGCCTCCAGTaGGATTCCCTTCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPELQGLQ*DSLLQS
Trigger: AGACTGCAGAAGGGAATCCCACTGGAGGCCTTGTAG...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATACTGGCAGAAAGACTaGTGCTCTCTCCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEYWQKD*CSLLLQ
Trigger: TTGCAGCAGGAGAGAGCAGCAGTCTTTCTGCCAGTA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGTTTTCAGACAGTTCATaGTCACTGCCGAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVFSDSS*SLPNPS
Trigger: TGAAGGATTCGGCAGTGAGCATGAACTGTCTGAAAA...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAAGGATTTCAAGCTTCTaGCCCATGTTGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPERISSF*PMLGPL
Trigger: GAGAGGACCCAACATGGGGCAGAAGCTTGAAATCCT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGCCCAGATGTCACAGCTaGTTAGTTTGGTATATTTCG +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVPRCHS*LVWYIS
Trigger: CGAAATATACCAAACTAACCAGCTGTGACATCTGGG...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATCGGTTCCACTCAGATaGTCTCAGCATCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPESVPLR*SQHPLL
Trigger: CAAGAGAGGATGCTGAGACCATCTGAGTGGAACCGA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGATCAGAAACAGACTGTaGGTCCTCACTATTAAGTTG +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVIRNRL*VLTIKL
Trigger: CAACTTAATAGTGAGGACTCACAGTCTGTTTCTGAT...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR TCA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGTTTGACACTGAAAAGTaGATCGGGGTAATAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SAMVRCQLTATSASWVQVFDTEK*IGVIKG
Trigger: TCCCTTTATTACCCCGATTCACTTTTCAGTGTCAAA...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAACTCAGCATCCTCTCTTaGTGTGATGGTGTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPELSILS*CDGVSC
Trigger: ACAACTTACACCATCACAGCAAGAGAGGATGCTGAG...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATCCTCTCTCATCTCTTaGATTCTGTACCCGGTTTAC +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPESSLIS*ILYPVY
Trigger: GTAAACCGGGTACAGAATCCAAGAGATGAGAGAGGA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGTAAGAGAGACAGGATaGAAAAATCTGTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEVRETG*KNLWGK
Trigger: CTTCCCCCACAGATTTTTCCATCCTGTCTCTCTTAC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGCAAAGTTGTGGAAATaGCCTCAGTTCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEAKLWK*PQFHGK
Trigger: TTTCCCATGGAACTGAGGCCATTTCCACAACTTTGC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATTTTCAGACAGTTCATaGTCACTGCCGAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEFSDSS*SLPNPS
Trigger: TGAAGGATTCGGCAGTGAGCATGAACTGTCTGAAAA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCGCCCACAGGCACAAGTaGTGGGTGTGCCATATACAA +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSAHRHK*WVCHIQ
Trigger: TTGTATATGGCACACCCAGCACTTGTGCCTGTGGGC...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAAGGGAAGAACAAGACTaGAGTTCTGTGCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEREEQD*SSVQSC
Trigger: ACAACTTTGCACAGAACTGCAGTCTTGTTCTTCCCT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGATCCTACGCAACTATaGAAAAGAGGTTGCCACATT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEDPTQL*KRGCHI
Trigger: AATGTGGCAACCTCTTTTGCATAGTTGCGTAGGATC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCAAGGCAAAGCGGGAGTaGCATGACCTTGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSKAKRE*HDLEEA
Trigger: AGCCTCTTCAAGGTCATGCCACTCCCGCTTTGCCTT...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATATCCAGTTCATACATaGAATCTGGATCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEYPVHT*NLDPNC
Trigger: ACAGTTCGGATCCAGATTTCATGTATGAACTGGATA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATTTGACACTGAAAAGTaGATCGGGGTAATAAAGGGA +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEFDTEK*IGVIKG
Trigger: TCCCTTTATTACCCCGATTCACTTTTCAGTGTCAAA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAACATGATTTGTGTGCTTaGAGTGGGTTTACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEHDLCA*SGFTCF
Trigger: AAAGCAAGTAAACCCACTTCAAGCACACAAATCATG...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATATGAACAAATGCTTTaGATTCTTGCCCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEYEQML*ILALPL
Trigger: GAGTGGAAGGGCAAGAATTCAAAGCATTTGTTCATA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCACGGCCCCTCTCCATaGTGCCTCGGGTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAHGPSP*CLGFVL
Trigger: CAAAACAAACCCGAGGCAGCATGGAGAGGGGCCGTG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAACCAACTTATCTACTATaGAAGCGAACTAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEPTYLL*KRTRGT
Trigger: TGTTCCTCTAGTTCGCTTCCATAGTAGATAAGTTGG...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCCGCTTACACTAGGCTaGGGCATTTCCAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAPLTLG*GISKPR
Trigger: TCTGGGCTTGGAAATGCCTCAGCCTAGTGTAAGCGG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATATCATATTCTGTGTTaGGGCCCCATAATTTCACTT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEYHILC*GPIISL
Trigger: AAGTGAAATTATGGGGCCTCAACACAGAATATGATA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGGTTGCCACATTGTATaGACAAATGCTTTGAATTCT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEGCHIV*TNALNS
Trigger: AGAATTCAAAGCATTTGTTCATACAATGTGGCAACC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCTGGTCTTTAACTCCTaGCCTCAGGTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRALVFNS*PQVIRP
Trigger: TGGGCGGATCACCTGAGGTCAGGAGTTAAAGACCAG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCAAAGGGACCTCAGCCTaGAGAGTCTTAGAAGAACAC +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSKGTSA*RVLEEH
Trigger: GTGTTCTTCTAAGACTCTGCAGGCTGAGGTCCCTTT...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCGCAGGTGTTCTCCTTTaGTGCATCTGTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSAGVLL*CICVNL
Trigger: CAGATTCACACAGATGCAGCAAAGGAGAACACCTGC...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAACACCTTTCTTTAAATaGAGACTATTGCTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPETPFFK*RLLLGS
Trigger: GCTTCCTAGCAATAGTCTGCATTTAAAGAAAGGTGT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGCTTCTGCCCCATGTTaGGTCCTCTCTCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPASAPC*VLSHLL
Trigger: CAAGAGATGAGAGAGGACCCAACATGGGGCAGAAGC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCTGTGTTGGCCGGGCTaGTCTTTAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRALCWPG*SLTPDL
Trigger: GAGGTCAGGAGTTAAAGACCAGCCCGGCCAACACAG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR TCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTTGTTTATGTCCTTCCTaGCGGGTTCCCGGAAATCGC +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRACLCPS*RVPGNR
Trigger: GCGATTTCCGGGAACCCGTCAGGAAGGACATAAACA...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR TCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCCGCTTACACTAGGCTaGGGCATTTCCAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYPLTLG*GISKPR
Trigger: TCTGGGCTTGGAAATGCCTCAGCCTAGTGTAAGCGG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTTGGTTAACAAATTCTaGGGTTTGCCCAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSLVNKF*GLPSNW
Trigger: CCAGTTGCTGGGCAAACCTCAGAATTTGTTAACCAA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTAAGGGCCGGCTCTGTTaGACTGGGTTGATCTTTACC +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAKGRLC*TGLIFT
Trigger: GGTAAAGATCAACCCAGTGCAACAGAGCCGGCCCTT...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTTGGCAGAAAGACTGCTaGTCTCTCCTGCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAWQKDC*SLLLQV
Trigger: CACTTGCAGCAGGAGAGAGCAGCAGTCTTTCTGCCA...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAACACATAATCCCATTTaGCTATGGAAGTGTATAACT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPETHNPI*LWKCIT
Trigger: AGTTATACACTTCCATAGGCAAATGGGATTATGTGT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAAACAAAGGCAAAATTTaGATTGCCTTTCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPENKGKI*IAFPSE
Trigger: TTCAGATGGAAAGGCAATGCAAATTTTGCCTTTGTT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGGGAAGCTCACTGACTaGAGTCAGGTCACTAATCAC +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPGKLTD*SQVTNH
Trigger: GTGATTAGTGACCTGACTCCAGTCAGTGAGCTTCCC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAATTATTAGCTTCATACTaGGCTTTCTTCTTTAACCGA +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPELLASY*AFFFNR
Trigger: TCGGTTAAAGAAGAAAGCCCAGTATGAAGCTAATAA...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCGACATTTCTGACCAGTaGTCCAATGAGGCTGATTAC +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSDISDQ*SNEADY
Trigger: GTAATCAGCCTCATTGGACCACTGGTCAGAAATGTC...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACACAGGCACAAGTGCTaGGTGTGCCATATACAAGTG +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPHRHKC*VCHIQV
Trigger: CACTTGTATATGGCACACCCAGCACTTGTGCCTGTG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAAAACTTTACTTAGACTaGCAGTTTGCCATATCAGTT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEKLYLD*QFAISV
Trigger: AACTGATATGGCAAACTGCCAGTCTAAGTAAAGTTT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGACAAGAATCATACATaGTACAGTAGAACAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEDKNHT*YSRTSN
Trigger: ATTGCTTGTTCTACTGTACCATGTATGATTCTTGTC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATTGTTTATGTCCTTCCTaGCGGGTTCCCGGAAATCGC +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYCLCPS*RVPGNR
Trigger: GCGATTTCCGGGAACCCGTCAGGAAGGACATAAACA...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTGGGTTTACTTGAGGTaGATTCACAATGCCTTCACT +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSWVYLR*IHNAFT
Trigger: AGTGAAGGCATTGTGAATTCACCTCAAGTAAACCCA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATAAGGGCCGGCTCTGTTaGACTGGGTTGATCTTTACC +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYKGRLC*TGLIFT
Trigger: GGTAAAGATCAACCCAGTGCAACAGAGCCGGCCCTT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGGTGTTCTCCTTTGCTaGATCTGTGTGAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPGVLLC*ICVNLA
Trigger: AGCCAGATTCACACAGATGCAGCAAAGGAGAACACC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATTGTCTCTTTGCCACTaGACCACAGTAGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPLSLCH*TTVAGV
Trigger: AACACCTGCTACTGTGGTGCAGTGGCAAAGAGACAA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATTGGCAGAAAGACTGCTaGTCTCTCCTGCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYWQKDC*SLLLQV
Trigger: CACTTGCAGCAGGAGAGAGCAGCAGTCTTTCTGCCA...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTTACTGGCAGAAAGACTaGTGCTCTCTCCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAYWQKD*CSLLLQ
Trigger: TTGCAGCAGGAGAGAGCAGCAGTCTTTCTGCCAGTA...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAACAAATTCTGAGGTTTaGCCAGCAACTGGTAGACCG +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPTNSEV*PATGRP
Trigger: CGGTCTACCAGTTGCTGGGCAAACCTCAGAATTTGT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCCACAAGTGCTGGGTGTaGCATATACAAGTGAGATTA +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSHKCWV*HIQVRL
Trigger: TAATCTCACTTGTATATGGCACACCCAGCACTTGTG...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACTGAGACTGATGTACTaGCAGAAAGACTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPLRLMY*QKDCCS
Trigger: AGAGCAGCAGTCTTTCTGCCAGTACATCAGTCTCAG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCAATGAACATCTAATATaGCCCACAGGCACAAGTGCT +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSNEHLI*PTGTSA
Trigger: AGCACTTGTGCCTGTGGGCCATATTAGATGTTCATT...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCTCAGCTGGGCACAGTaGCAAGCTCTCATCTCTATT +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRALSWAQ*QALISI
Trigger: AATAGAGATGAGAGCTTGCCACTGTGCCCAGCTGAG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR TCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACATCCTCTCTTGCTGTaGTGGTGTAAGTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPHPLLL*WCKLFT
Trigger: AGTGAACAACTTACACCATCACAGCAAGAGAGGATG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAACACACAGGAGCAGCTaGTCTGCTTGTGATCTTTTT +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPTHRSS*SACDLF
Trigger: AAAAAGATCACAAGCAGAGCAGCTGCTCCTGTGTGT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTGGTGTTCTCCTTTGCTaGATCTGTGTGAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAGVLLC*ICVNLA
Trigger: AGCCAGATTCACACAGATGCAGCAAAGGAGAACACC...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTGCAGGTGTTCTCCTTTaGTGCATCTGTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAAGVLL*CICVNL
Trigger: CAGATTCACACAGATGCAGCAAAGGAGAACACCTGC...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATTTCTCTTGTCTCTTTaGCACTGCACCACAGTAGCA +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPFLLSL*HCTTVA
Trigger: TGCTACTGTGGTGCAGTGGCAAAGAGACAAGAGAAA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAACAGTTCATGCTCACTaGCGAATCCTTCATCATGGT +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPTVHAH*RILHHG
Trigger: ACCATGATGAAGGATTCGGCAGTGAGCATGAACTGT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGAAGTGCTCAGGGGTTaGAAGGTGACAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPEVLRG*KVTENK
Trigger: TTTGTTTTCTGTCACCTTCCAACCCCTGAGCACTTC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTACATCAGTTCTCCGTaGCTTCTTTACTGCATATTT +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSYISSP*LLYCIF
Trigger: AAATATGCAGTAAAGAAGTCACGGAGAACTGATGTA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTTACAATGGATAACGTaGCAAAACGCAGACATTTCT +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSLQWIT*QNADIS
Trigger: AGAAATGTCTGCGTTTTGTCACGTTATCCATTGTAA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATTGCTAAGAGATCTGTaGTCATCAGAGTTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPLLRDL*SSEFVP
Trigger: CGGAACAAACTCTGATGAGCACAGATCTCTTAGCAA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTTTTCTCTTGTCTCTTTaGCACTGCACCACAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAFLLSL*HCTTVA
Trigger: TGCTACTGTGGTGCAGTGGCAAAGAGACAAGAGAAA...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCCGGTTTACAATCTCTTaGTTGATGGAGTTGATTACA +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSRFTIS*LMELIT
Trigger: TGTAATCAACTCCATCAAGCAAGAGATTGTAAACCG...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCCACAGCTGGTTAGTTTaGTATATTTCGTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSHSWLV*YISLGL
Trigger: AAGACCTAACGAAATATACCAAACTAACCAGCTGTG...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATTCTGTGCAAAGTTGTaGAAATGGCCTCAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPFCAKL*KWPQFH
Trigger: ATGGAACTGAGGCCATTTCCACAACTTTGCACAGAA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAACAAAAATGGCAATTTaGCCTAGCTCAGTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPTKMAI*PSSVPR
Trigger: CCTAGGAACTGAGCTAGGCCAAATTGCCATTTTTGT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATATCCAGGACATCTGTaGAAGACTCCAGATTTTCAA +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPYPGHL*KTPDFQ
Trigger: TTGAAAATCTGGAGTCTTTCACAGATGTCCTGGATA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATTGTTGGTCTTCACCATaGTTTGTGTGCTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYCWSSP*FVCLKW
Trigger: CCACTTCAAGCACACAAATCATGGTGAAGACCAACA...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGTGTTTACATTGTTATaGAAGAGGCAAACCGAACCT +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPVFTLL*KRQTEP
Trigger: AGGTTCGGTTTGCCTCTTTCATAACAATGTAAACAC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCAGGTTTCCCCAGAGTaGTTCCAATTCAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYQVSPE*FQFNCL
Trigger: CAAGCAATTGAATTGGAAGCACTCTGGGGAAACCTG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTTTGCTAAGAGATCTGTaGTCATCAGAGTTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRALLRDL*SSEFVP
Trigger: CGGAACAAACTCTGATGAGCACAGATCTCTTAGCAA...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCTAGACGGTTTTAAATaGCACAGAGTCCCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYLDGFK*HRVPWL
Trigger: TAACCAGGGGACTCTGTGGCATTTAAAACCGTCTAG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAAATGCTTTGAATTCTTaGCCTTCCACTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPNALNS*PSTLLL
Trigger: CAAGAGAAGAGTGGAAGGGCAAGAATTCAAAGCATT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATAGGACTGCATTTAGTTaGCTGTTCACCCAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYRTAFS*LFTQVV
Trigger: GACAACTTGGGTGAACAGCCAACTAAATGCAGTCCT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCGTCTTCTCTAACACTTaGTTAACAAATTCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSVFSNT*LTNSEV
Trigger: AACCTCAGAATTTGTTAACCAAGTGTTAGAGAAGAC...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATTGCCACAGAGTCCCCTaGTTAAAATGTAAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYCHRVP*LKCKAA
Trigger: TGCAGCTTTACATTTTAACCAGGGGACTCTGTGGCA...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATATGGCCTCAGTTCCATaGGAAATGGTATTCCACAAC +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYMASVP*EMVFHN
Trigger: GTTGTGGAATACCATTTCCCATGGAACTGAGGCCAT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CAA 72 bp AGTTCACCCAAACTTGGCACATTGAAATACCCAACTTaGATGTTCTTCACTAGTTACCAAGTCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: SSPKLGTLKYPT*MFFTSYQVFNS
Trigger: GGAATTGAAGACTTGGTAACTAGTGAAGAACATCAAAGTTGGGTATTTCAATGTGCCAAGTTTGGGTGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTTATCCAGGACATCTGTaGAAGACTCCAGATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAYPGHL*KTPDFQ
Trigger: TTGAAAATCTGGAGTCTTTCACAGATGTCCTGGATA...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR TCA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCATGATTTGTGTGCTTaGAGTGGGTTTACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAHDLCA*SGFTCF
Trigger: AAAGCAAGTAAACCCACTTCAAGCACACAAATCATG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR TCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATTCTGGACTTCATTATaGGCTATCTGTATACCATGT +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPFWTSL*AICIPC
Trigger: ACATGGTATACAGATAGCTCATAATGAAGTCCAGAA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATTGCAAGCCTGTGTTTTaGCTTCTCCAACCTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYCKPVF*LLQPKK
Trigger: CTTTTTAGGTTGGAGAAGGCAAAACACAGGCTTGCA...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCATAGTAATCAGTCCTaGTCCTATCCACCCAGAATT +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYHSNQS*SYPPRI
Trigger: AATTCTGGGTGGATAGGAGCAGGACTGATTACTATG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCCCAGATGTCACAGCTaGTTAGTTTGGTATATTTCG +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYPRCHS*LVWYIS
Trigger: CGAAATATACCAAACTAACCAGCTGTGACATCTGGG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCTTAACAAGAGCGACTaGACAGCATGCTTTCATATG +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYLNKSD*TACFHM
Trigger: CATATGAAAGCATGCTGTCCAGTCGCTCTTGTTAAG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATATCAGAAACAGACTGTaGGTCCTCACTATTAAGTTG +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYIRNRL*VLTIKL
Trigger: CAACTTAATAGTGAGGACTCACAGTCTGTTTCTGAT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATAACAATGGGTTTACTTaGGGTGAATTCACAATGCCT +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYNNGFT*GEFTMP
Trigger: AGGCATTGTGAATTCACCTCAAGTAAACCCATTGTT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATTATTACGGCACTGTGTaGGACTTATTTGTCATGATC +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYYYGTV*DLFVMI
Trigger: GATCATGACAAATAAGTCTCACACAGTGCCGTAATA...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATGTTTCCGAAGTTCATTaGCTATCTGGAGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYVSEVH*LSGGVF
Trigger: AAAAACTCCTCCAGATAGGCAATGAACTTCGGAAAC...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAACAATCGCAATAATGTaGAAGTATTTGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPTIAIM*KYLSSS
Trigger: GGAAGAAGACAAATACTTGCACATTATTGCGATTGT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGTTTGCCATATCAGTTaGATTTGTCTTTGGTACAAA +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPVCHIS*ICLWYK
Trigger: TTTGTACCAAAGACAAATGCAACTGATATGGCAAAC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGTATCATGTAAGCTGTaGAAAACTTTACTTAGACTG +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPVSCKL*KTLLRL
Trigger: CAGTCTAAGTAAAGTTTTGCACAGCTTACATGATAC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACATTGTATGAACAAATaGTTTGAATTCTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPHCMNK*FEFLPF
Trigger: GAAGGGCAAGAATTCAAAGCATTTGTTCATACAATG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATGGATGGAAAAATCTGTaGGGGAAGGTTTATAATGCT +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYGWKNL*GKVYNA
Trigger: AGCATTATAAACCTTCCCCCACAGATTTTTCCATCC...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATTTAAACCATCAGACTTaGGCTTATCATCTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYLNHQT*AYHLFS
Trigger: GCTAAACAGATGATAAGCTCAAGTCTGATGGTTTAA...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR TCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATGGAAGTGGAAGGGAATaGAGACGTTTAGTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYGSGRE*RRLVLN
Trigger: ATTTAAAACTAAACGTCTTCATTCCCTTCCACTTCC...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR GCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCATAGAAAAATCTTGTaGATCACAGTTCAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYHRKIL*ITVQLR
Trigger: CCTTAGCTGAACTGTGATGCACAAGATTTTTCTATG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCTGATACATATTACTTaGCAAAGTATCTCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYLIHIT*QSISVP
Trigger: TGGAACCGAGATACTTTGCCAAGTAATATGTATCAG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATGTCATAAAAATGTGGTaGAAAGGCAGATACAGTACA +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYVIKMW*KGRYST
Trigger: TGTACTGTATCTGCCTTTCCACCACATTTTTATGAC...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296953.6
3UTR CAA 72 bp AGAATCATACATGGTACAGTAGAACAAGCAATTATATaGACTGGAAAAGTGTGGCACCCAATTCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: RIIHGTVEQAII*TGKVWHPIQNS
Trigger: TGAGTTTTGAATTGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTATGATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATTCAAGTTTCAAGATATaGAGAGATGCTAACATTCTG +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYSSFKI*RDANIL
Trigger: CAGAATGTTAGCATCTCTCCATATCTTGAAACTTGA...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CCA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATAATCCCATTTGCCTATaGAAGTGTATAACTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYNPICL*KCITFS
Trigger: ACTGAAAGTTATACACTTCCATAGGCAAATGGGATT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS GCA 90 bp GGGAGGCTGGGGCAGGATAATCGCTTGAACCCAGGAAACGGAGGTTaGAGTGCGCCAGGATCACGCCACCGGACTCCAACCTGGGCAACG +
Preference number: 5 (lower is better)
Translates to: GRLGQDNRLNPGNGG*SAPGSRHRTPTWAT
Trigger: CGTTGCCCAGGTTGGAGTCCGGTGGCGTGATCCTGGCGCACTGCAACCTCCGTTTCCTGGGTTCAAGCGATTATCCTGCCCCAGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517882.1
CDS TCA 90 bp TCTGTCAGGAAGCATAGGGCCGAGAAAGAGGGAGAATCCAGAGACTaGGCTCCATCTAGTCCCAGGAACCACCCCCAGGGGAGGCTTGAC +
Preference number: 5 (lower is better)
Translates to: SVRKHRAEKEGESRD*APSSPRNHPQGRLD
Trigger: GTCAAGCCTCCCCTGGGGGTGGTTCCTGGGACTAGATGGAGCTCAGTCTCTGGATTCTCCCTCTTTCTCGGCCCTATGCTTCCTGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517882.1
ENST00000523161.1
CDS-3UTR CAA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGCAAGGGCCGGCTCTGTaGCACTGGGTTGATCTTTAC +
Preference number: 5 (lower is better)
Translates to: SAMVRCQLTATSASWVQVQGPAL*HWVDLY
Trigger: GTAAAGATCAACCCAGTGCAACAGAGCCGGCCCTTG...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS GCA 90 bp TTTTCTGGGATGAATCTGAGACTGATGTACTGGCAGAAAGACTGCTaGTCTCTCCTGCTGCAAGTGACCCAGGACCTTCCTGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: FSGMNLRLMYWQKDC*SLLLQVTQDLPGAG
Trigger: CCCTGCCCCAGGAAGGTCCTGGGTCACTTGCAGCAGGAGAGAGCAGCAGTCTTTCTGCCAGTACATCAGTCTCAGATTCATCCCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS GCA 90 bp TTGTCTCTTTGCCACTGCACCACAGTAGCAGGTGTTCTCCTTTGCTaGATCTGTGTGAATCTGGCTCAACAAGGGCCGGCTCTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LSLCHCTTVAGVLLC*ICVNLAQQGPALLH
Trigger: GTGCAACAGAGCCGGCCCTTGTTGAGCCAGATTCACACAGATGCAGCAAAGGAGAACACCTGCTACTGTGGTGCAGTGGCAAAGAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS GCA 90 bp CTCTTGTCTCTTTGCCACTGCACCACAGTAGCAGGTGTTCTCCTTTaGTGCATCTGTGTGAATCTGGCTCAACAAGGGCCGGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LLSLCHCTTVAGVLL*CICVNLAQQGPALL
Trigger: CAACAGAGCCGGCCCTTGTTGAGCCAGATTCACACAGATGCAGCAAAGGAGAACACCTGCTACTGTGGTGCAGTGGCAAAGAGACAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CCA 90 bp AGAAAGACTTGCTTTCTTGGGTTAAAGGAGGGCGATTACAGGGTTTaGCGGCCAGGTCTGTCAGGAAGCATAGGGCCGAGAAAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: RKTCFLGLKEGDYRV*RPGLSGSIGPRKRE
Trigger: CTCCCTCTTTCTCGGCCCTATGCTTCCTGACAGACCTGGCCGCCAAACCCTGTAATCGCCCTCCTTTAACCCAAGAAAGCAAGTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517882.1
ENST00000523161.1
CDS TCA 90 bp TCTATACTAGCTAGCTCTCTCTTCCCTGTCAGCTCTCAGTTGGCCTaGCGTCTAGATCCCTGCCCTCTGATCCTCCCCACATTGTGCAAT +
Preference number: 5 (lower is better)
Translates to: SILASSLFPVSSQLA*RLDPCPLILPTLCN
Trigger: ATTGCACAATGTGGGGAGGATCAGAGGGCAGGGATCTAGACGTCAGGCCAACTGAGAGCTGACAGGGAAGAGAGAGCTAGCTAGTATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS CCA 90 bp GAAAGACTGCTGCTCTCTCCTGCTGCAAGTGACCCAGGACCTTCCTaGGGCAGGGGACTTAGTAATAGTTCCTGGGTTTCTTTAAAAGGC +
Preference number: 5 (lower is better)
Translates to: ERLLLSPAASDPGPS*GRGLSNSSWVSLKG
Trigger: GCCTTTTAAAGAAACCCAGGAACTATTACTAAGTCCCCTGCCCCAGGAAGGTCCTGGGTCACTTGCAGCAGGAGAGAGCAGCAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS-3UTR CAA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGTGTGCTCATCAGAGTTaGTTCCGAAAAGGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: SAMVRCQLTATSASWVQVCAHQS*FRKGVA
Trigger: AGCCACACCTTTTCGGAACAAACTCTGATGAGCACA...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS CCA 90 bp TCCCTGCCCTCTGATCCTCCCCACATTGTGCAATCTGTTCAGGGATaGGAAACCAGAGAGCCAAGTTTGTGGGAATCCTGTGAAATGCAT +
Preference number: 5 (lower is better)
Translates to: SLPSDPPHIVQSVQG*ETREPSLWESCEMH
Trigger: ATGCATTTCACAGGATTCCCACAAACTTGGCTCTCTGGTTTCCCATCCCTGAACAGATTGCACAATGTGGGGAGGATCAGAGGGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS TCA 90 bp AGAGCCCGTTCACTTTCTCCTCAACCCTTCTGGTTATACCAACTGTaGCAGGTCAGAAACCAGCAGCCTCCTAGTCATTTCCTGAATGGG +
Preference number: 5 (lower is better)
Translates to: RARSLSPQPFWLYQL*QVRNQQPPSHFLNG
Trigger: CCCATTCAGGAAATGACTAGGAGGCTGCTGGTTTCTGACCTGTCACAGTTGGTATAACCAGAAGGGTTGAGGAGAAAGTGAACGGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS-3UTR CAA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGGTCTCTAGGATTCTGTaGGTAGTTCATCTCTCTATC +
Preference number: 5 (lower is better)
Translates to: SAMVRCQLTATSASWVQVVSRIL*VVHLSI
Trigger: GATAGAGAGATGAACTACCAACAGAATCCTAGAGAC...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS GCA 90 bp GCAACTGGTAGACCGAGAGTATCTTTAATGAGGATTTCAAGCTTCTaGCCCATGTTGGGTCCTCTCTCATCTCTTGGATTCTGTACCCGG +
Preference number: 5 (lower is better)
Translates to: ATGRPRVSLMRISSF*PMLGPLSSLGFCTR
Trigger: CCGGGTACAGAATCCAAGAGATGAGAGAGGACCCAACATGGGGCAGAAGCTTGAAATCCTCATTAAAGATACTCTCGGTCTACCAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS CCA 90 bp TTTGCTAAGAGATCTGTGCTCATCAGAGTTTGTTCCGAAAAGGTGTaGCTTCGAAAGGCATCCCCGAAAGGCGGATCCATTCCGCTTACA +
Preference number: 5 (lower is better)
Translates to: FAKRSVLIRVCSEKV*LRKASPKGGSIPLT
Trigger: TGTAAGCGGAATGGATCCGCCTTTCGGGGATGCCTTTCGAAGCCACACCTTTTCGGAACAAACTCTGATGAGCACAGATCTCTTAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CCA 90 bp ACAAGGCCTCCAGTGGGATTCCCTTCTGCAGTCTTCTCTAACACTTaGTTAACAAATTCTGAGGTTTGCCCAGCAACTGGTAGACCGAGA +
Preference number: 5 (lower is better)
Translates to: TRPPVGFPSAVFSNT*LTNSEVCPATGRPR
Trigger: TCTCGGTCTACCAGTTGCTGGGCAAACCTCAGAATTTGTTAACCAAGTGTTAGAGAAGACTGCAGAAGGGAATCCCACTGGAGGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAACTGGATCCGAACTGTTaGCTAAGAGATCTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: TKGEGQDIVISPAPIHPELDPNC*LRDLCS
Trigger: TGAGCACAGATCTCTTAGCAAACAGTTCGGATCCAG...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGTCACAGCTGGTTAGTTaGGTATATTTCGTTAGGTCT +
Preference number: 5 (lower is better)
Translates to: SAMVRCQLTATSASWVQVSQLVS*VYFVRS
Trigger: AGACCTAACGAAATATACCAAACTAACCAGCTGTGA...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGGGTAAGGGATTTTGTTaGACACTGAAAAGTGAATCG +
Preference number: 5 (lower is better)
Translates to: SAMVRCQLTATSASWVQVGKGFC*TLKSES
Trigger: CGATTCACTTTTCAGTGTCAAACAAAATCCCTTACC...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS TCA 90 bp GTGGGTCATATAACGCTGGATGCCTTGGATGCTACTGTCTGTCAGTaGCTTTCTCCTACAGCAGCTGAGCTGATTCTCATGTCTATGTCT +
Preference number: 5 (lower is better)
Translates to: VGHITLDALDATVCQ*LSPTAAELILMSMS
Trigger: AGACATAGACATGAGAATCAGCTCAGCTGCTGTAGGAGAAAGTCACTGACAGACAGTAGCATCCAAGGCATCCAGCGTTATATGACCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS-3UTR CAA 90 bp AGTGCAATGGTGCGATGTCAGCTAACCGCAACCTCAGCCTCCTGGGTTCAAGTGTATAACCTCTTCATCTaGGTAAGGACTAGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: SAMVRCQLTATSASWVQVYNLFI*VRTRKV
Trigger: GACTTTTCTAGTCCTTACCAAGATGAAGAGGTTATA...CACTTGAACCCAGGAGGCTGAGGTTGCGGTTAGCTGACATCGCACCATTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS GCA 90 bp AGCAGCTCTACAGTCCCCATCTCCAGTTTGCTAGGAAGGGCTGAATaGCTAGGTACACGGAGTAAACATTATGGATTAGTAGCTCAACTT +
Preference number: 5 (lower is better)
Translates to: SSSTVPISSLLGRAE*LGTRSKHYGLVAQL
Trigger: AAGTTGAGCTACTAATCCATAATGTTTACTCCGTGTACCTAGGCATTCAGCCCTTCCTAGCAAACTGGAGATGGGGACTGTAGAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS GCA 90 bp GCATTCTTCTTACCGAGAGTATCTTTAATGAGGATTTCAAGCTTCTaGCCCATGTTGGGTCCTCTCTCATCTCTTGGATTCTGTACCCGG +
Preference number: 5 (lower is better)
Translates to: AFFLPRVSLMRISSF*PMLGPLSSLGFCTR
Trigger: CCGGGTACAGAATCCAAGAGATGAGAGAGGACCCAACATGGGGCAGAAGCTTGAAATCCTCATTAAAGATACTCTCGGTAAGAAGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS-3UTR CAA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGTCTCTAGGATTCTGTaGGTAGTTCATCTCTCTATC +
Preference number: 5 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEVSRIL*VVHLSI
Trigger: GATAGAGAGATGAACTACCAACAGAATCCTAGAGAC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAAGTTTCCGAAGTTCATaGCCTATCTGGAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: TKGEGQDIVISPAPIHPESFRSS*PIWRSF
Trigger: AAAACTCCTCCAGATAGGCAATGAACTTCGGAAACT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS TCA 90 bp GGGTCTTGGTCTATCACTCCAGGCAAAAGGGATGGCTCTGTCCTCTaGACTCCTACAACTTTCCTAGTATTCATATGCTACTTGGGATTA +
Preference number: 5 (lower is better)
Translates to: GSWSITPGKRDGSVL*TPTTFLVFICYLGL
Trigger: TAATCCCAAGTAGCATATGAATACTAGGAAAGTTGTAGGAGTTCAGAGGACAGAGCCATCCCTTTTGCCTGGAGTGATAGACCAAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS-3UTR CAA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAGGTAAGGGATTTTGTTaGACACTGAAAAGTGAATCG +
Preference number: 5 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEGKGFC*TLKSES
Trigger: CGATTCACTTTTCAGTGTCAAACAAAATCCCTTACC...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACAAGGGCCGGCTCTGTaGCACTGGGTTGATCTTTAC +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPQGPAL*HWVDLY
Trigger: GTAAAGATCAACCCAGTGCAACAGAGCCGGCCCTTG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAGGGAGTGGCATGACCTaGAAGAGGCTCCATCCCTTT +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPGSGMT*KRLHPF
Trigger: AAAGGGATGGAGCCTCTTCAAGGTCATGCCACTCCC...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTTTCCTTCCTTGACCTaGGTCGGGCTGTTAAGGGAA +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSFPSLT*VGLLRE
Trigger: TTCCCTTAACAGCCCGACCAAGGTCAAGGAAGGAAA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTGTGCTCATCAGAGTTaGTTCCGAAAAGGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSCAHQS*FRKGVA
Trigger: AGCCACACCTTTTCGGAACAAACTCTGATGAGCACA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTGGGAGTGGCATGACCTaGAAGAGGCTCCATCCCTTT +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAGSGMT*KRLHPF
Trigger: AAAGGGATGGAGCCTCTTCAAGGTCATGCCACTCCC...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCGGCTGTTCACCCAAGTaGTCGGAGACAAAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSGCSPK*SETKRE
Trigger: TTCTCTTTTTGTCTCCGACAACTTGGGTGAACAGCC...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAATAATGTGCAAGTATTaGTCTTCTTCCGGTCAAGTA +
Preference number: 5 (lower is better)
Translates to: TKGEGQDIVISPAPIHPEIMCKY*SSSGQV
Trigger: TACTTGACCGGAAGAAGACAAATACTTGCACATTAT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ACAAAGGGCGAAGGGCAAGACATAGTAATCAGTCCTGCTCCTATCCACCCAGAAACACATAGAAAAATCTaGTGCATCACAGTTCAGCTA +
Preference number: 5 (lower is better)
Translates to: TKGEGQDIVISPAPIHPETHRKI*CITVQL
Trigger: TAGCTGAACTGTGATGCACAAGATTTTTCTATGTGT...TTCTGGGTGGATAGGAGCAGGACTGATTACTATGTCTTGCCCTTCGCCCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCAGTAATCCACTTCTTTaGTTCCCCAGATGTCACAGC +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSSNPLL*FPRCHS
Trigger: GCTGTGACATCTGGGGAACAAAAGAAGTGGATTACT...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS TCA 90 bp GTTCCCAGTTTGAGGTTAAAGCACCCTCATTATCCAGGACATCTGTaGAAGACTCCAGATTTTCAATGTCTTTGCAGTCCTCCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: VPSLRLKHPHYPGHL*KTPDFQCLCSPPKK
Trigger: TTTCTTTGGAGGACTGCAAAGACATTGAAAATCTGGAGTCTTTCACAGATGTCCTGGATAATGAGGGTGCTTTAACCTCAAACTGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CCA 90 bp AGTAATCCACTTCTTTTGTTCCCCAGATGTCACAGCTGGTTAGTTTaGTATATTTCGTTAGGTCTTCACAGTATGTATCCCACTGTTCCC +
Preference number: 5 (lower is better)
Translates to: SNPLLLFPRCHSWLV*YISLGLHSMYPTVP
Trigger: GGGAACAGTGGGATACATACTGTGAAGACCTAACGAAATATACCAAACTAACCAGCTGTGACATCTGGGGAACAAAAGAAGTGGATTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATGCCTCGGGTTTGTTTaGTTTATGTCCTTCCTGACG +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPCLGFV*FMSFLT
Trigger: CGTCAGGAAGGACATAAACAAAACAAACCCGAGGCA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCCCACTGTTCCCAGTTaGAGGTTAAAGCACCCTCAT +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAPTVPS*RLKHPH
Trigger: ATGAGGGTGCTTTAACCTCAAACTGGGAACAGTGGG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTTGAAGTGGGTTTACTaGCTTTTTGGACACAGTCTG +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSLKWVY*LFGHSL
Trigger: CAGACTGTGTCCAAAAAGCAAGTAAACCCACTTCAA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAAGCAGGTGTTCTCCTTaGCTGCATCTGTGTGAATCT +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPSRCSP*LHLCES
Trigger: AGATTCACACAGATGCAGCAAAGGAGAACACCTGCT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTTGCCTCGGGTTTGTTTaGTTTATGTCCTTCCTGACG +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRACLGFV*FMSFLT
Trigger: CGTCAGGAAGGACATAAACAAAACAAACCCGAGGCA...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCATGCTGCCTCGGGTTaGTTTTGTTTATGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAHAASG*FCLCPS
Trigger: GGAAGGACATAAACAAAACAAACCCGAGGCAGCATG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCTGGATCCGAACTGTTaGCTAAGAGATCTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRALDPNC*LRDLCS
Trigger: TGAGCACAGATCTCTTAGCAAACAGTTCGGATCCAG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCCCACTGTTCCCAGTTaGAGGTTAAAGCACCCTCAT +
Preference number: 5 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYPTVPS*RLKHPH
Trigger: ATGAGGGTGCTTTAACCTCAAACTGGGAACAGTGGG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCACTCTGTTGCACTGGGTaGATCTTTACCTTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPLCCTG*IFTFAF
Trigger: AAAGGCAAAGGTAAAGATCAACCCAGTGCAACAGAG...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTAGCAGGTGTTCTCCTTaGCTGCATCTGTGTGAATCT +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRASRCSP*LHLCES
Trigger: AGATTCACACAGATGCAGCAAAGGAGAACACCTGCT...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTGGCTGTTCACCCAAGTaGTCGGAGACAAAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRAGCSPK*SETKRE
Trigger: TTCTCTTTTTGTCTCCGACAACTTGGGTGAACAGCC...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATCTTCCGTGAAGATATaGAAGTCACCTCCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPSSVKI*KSPPSG
Trigger: ACCTGAAGGAGGTGACTTCAATATCTTCACGGAAGA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTCTGATACATATTACTaGGCAAAGTATCTCGGTTCC +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSSDTYY*AKYLGS
Trigger: GGAACCGAGATACTTTGCCAAGTAATATGTATCAGA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCAGGCTGATTACACCTTaGATGTTGGTATCCTTAATC +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSRLITP*MLVSLI
Trigger: GATTAAGGATACCAACATCAAAGGTGTAATCAGCCT...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCGAACAAGCAATTATATaGACTGGAAAAGTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSEQAII*TGKVWH
Trigger: GTGCCACACTTTTCCAGTCAATATAATTGCTTGTTC...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCAAATGCTTTGAATTCTaGCCCTTCCACTCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSKCFEF*PFHSSL
Trigger: AAGAGAAGAGTGGAAGGGCAAGAATTCAAAGCATTT...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS TCA 90 bp TGTTCAGGGATGGGAAACCAGAGAGCCAAGTTTGTGGGAATCCTGTaGAATGCATTACTGAGTAAAACAAGTAAGAATCTCTACACTAAA +
Preference number: 5 (lower is better)
Translates to: CSGMGNQRAKFVGIL*NALLSKTSKNLYTK
Trigger: TTTAGTGTAGAGATTCTTACTTGTTTTACTCAGTAATGCATTTCACAGGATTCCCACAAACTTGGCTCTCTGGTTTCCCATCCCTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCATGCTGCCTCGGGTTaGTTTTGTTTATGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYHAASG*FCLCPS
Trigger: GGAAGGACATAAACAAAACAAACCCGAGGCAGCATG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTAGTAATCCACTTCTTTaGTTCCCCAGATGTCACAGC +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRASNPLL*FPRCHS
Trigger: GCTGTGACATCTGGGGAACAAAAGAAGTGGATTACT...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCTATAACCTCTTCATCTaGGTAAGGACTAGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSYNLFI*VRTRKV
Trigger: GACTTTTCTAGTCCTTACCAAGATGAAGAGGTTATA...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTCTCTGTTGCACTGGGTaGATCTTTACCTTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRALCCTG*IFTFAF
Trigger: AAAGGCAAAGGTAAAGATCAACCCAGTGCAACAGAG...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCATAAAGAGAGGGAATTaGAAACCATACCCATCTGAA +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSIKRGN*KPYPSE
Trigger: TTCAGATGGGTATGGTTTCAAATTCCCTCTCTTTAT...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TTTTATATAGATCAAGTATCGCTGCAGCATTCTGACCAGCCCAGATTTAGCAGCACTATGCAAAAGAGGTaGCCACATTGTATGAACAAA +
Preference number: 5 (lower is better)
Translates to: FYIDQVSLQHSDQPRFSSTMQKR*PHCMNK
Trigger: TTTGTTCATACAATGTGGCAACCTCTTTTGCATAGT...GCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATACTTGATCTATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATAGAAGTGCTCAGGGGTaGGAAGGTGACAGAAAACAA +
Preference number: 5 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYRSAQG*EGDRKQ
Trigger: TTGTTTTCTGTCACCTTCCAACCCCTGAGCACTTCT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS TCA 90 bp AACTTTTTCCAAGTTCTTCCCTACCCTAGGCTTCTAGTTCCAGCATaGCAGATTCTTCATTATTTGCATGGCATACTAAGCATCTCAAAT +
Preference number: 5 (lower is better)
Translates to: NFFQVLPYPRLLVPA*QILHYLHGILSISN
Trigger: ATTTGAGATGCTTAGTATGCCATGCAAATAATGAAGAATCTGTCATGCTGGAACTAGAAGCCTAGGGTAGGGAAGAACTTGGAAAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATCACAGCTGGTTAGTTaGGTATATTTCGTTAGGTCT +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPSQLVS*VYFVRS
Trigger: AGACCTAACGAAATATACCAAACTAACCAGCTGTGA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTTTGAAGTGGGTTTACTaGCTTTTTGGACACAGTCTG +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRALKWVY*LFGHSL
Trigger: CAGACTGTGTCCAAAAAGCAAGTAAACCCACTTCAA...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS GCA 90 bp GGTCCTCTCTCATCTCTTGGATTCTGTACCCGGTTTACAATCTCTTaGTTGATGGAGTTGATTACAAACAATAAATTATCATATTCTGTG +
Preference number: 5 (lower is better)
Translates to: GPLSSLGFCTRFTIS*LMELITNNKLSYSV
Trigger: CACAGAATATGATAATTTATTGTTTGTAATCAACTCCATCAAGCAAGAGATTGTAAACCGGGTACAGAATCCAAGAGATGAGAGAGGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296953.6
ENST00000520464.1
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAAGATTTTCAATGTCTTaGCAGTCCTCCAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPRFSMS*QSSKER
Trigger: TCTTTCTTTGGAGGACTGCAAAGACATTGAAAATCT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCATTATCATATTCTGTGTaGAGGCCCCATAATTTCACT +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPLSYSV*RPHNFT
Trigger: AGTGAAATTATGGGGCCTCAACACAGAATATGATAA...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp ATACATGGTACAGTAGAACAAGCAATTATATTGACTGGAAAAGTGTGGCACCCAAGCAACATTGTTCATTaGTTACTGGGTGTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: IHGTVEQAIILTGKVWHPSNIVH*LLGVLD
Trigger: ATCTAGAACACCCAGTAACAAATGAACAATGTTGCT...TGGGTGCCACACTTTTCCAGTCAATATAATTGCTTGTTCTACTGTACCATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCCACCATTCCTACAGTaGACATTCATTGTTACATCC +
Preference number: 5 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYPPFLQ*TFIVTS
Trigger: GGATGTAACAATGAATGTCAACTGTAGGAATGGTGG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATCCCAAACTTGGCACATaGAAATACCCAACTTTGATG +
Preference number: 5 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYPKLGT*KYPTLM
Trigger: CATCAAAGTTGGGTATTTCAATGTGCCAAGTTTGGG...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATGTGCTTCCAATTCAATaGCTTGGATCACTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYVLPIQ*LGSLLF
Trigger: AAAAAGCAGTGATCCAAGCAATTGAATTGGAAGCAC...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp TCAAGGAATCAGCTTATGAATCCCTATGTGAGCAAAAGTGATCATTTTAGAGCTAGATTTTCAATGTCTTaGCAGTCCTCCAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SRNQLMNPYVSKSDHFRARFSMS*QSSKER
Trigger: TCTTTCTTTGGAGGACTGCAAAGACATTGAAAATCT...AGCTCTAAAATGATCACTTTTGCTCACATAGGGATTCATAAGCTGATTCCTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522692.5
CDS-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATAGTTTGCCATATCAGTaGCATTTGTCTTTGGTACAA +
Preference number: 5 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYSLPYQ*HLSLVQ
Trigger: TTGTACCAAAGACAAATGCAACTGATATGGCAAACT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATGAACATGTACAATTGTaGGGGTTTTTACATTACCCT +
Preference number: 5 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYEHVQL*GFLHYP
Trigger: AGGGTAATGTAAAAACCCCAACAATTGTACATGTTC...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS-3UTR CAA 90 bp CTGGGTGTTCTAGATCAAACCTTCACAAGCTATATATATAGCTTCATATGCTATAGGGAACATAAGTTTTaGTTAATTCTTGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: LGVLDQTFTSYIYSFICYREHKF*LILAEG
Trigger: GCCTTCAGCAAGAATTAACAAAAACTTATGTTCCCT...ATAGCATATGAAGCTATATATATAGCTTGTGAAGGTTTGATCTAGAACACCCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS GCA 72 bp TCTAGTCCCAGGAACCACCCCCAGGGGAGGCTTGACTaGCCTCGGTACTTCCCTGCCTCCTCAGCTCGTGTG +
Preference number: 6 (lower is better)
Translates to: SSPRNHPQGRLD*PRYFPASSARV
Trigger: CACACGAGCTGAGGAGGCAGGGAAGTACCGAGGGCAGTCAAGCCTCCCCTGGGGGTGGTTCCTGGGACTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517882.1
ENST00000523161.1
CDS GCA 72 bp GGGCAGGATAATCGCTTGAACCCAGGAAACGGAGGTTaGAGTGCGCCAGGATCACGCCACCGGACTCCAACC +
Preference number: 6 (lower is better)
Translates to: GQDNRLNPGNGG*SAPGSRHRTPT
Trigger: GGTTGGAGTCCGGTGGCGTGATCCTGGCGCACTGCAACCTCCGTTTCCTGGGTTCAAGCGATTATCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517882.1
CDS TCA 72 bp AAGCATAGGGCCGAGAAAGAGGGAGAATCCAGAGACTaGGCTCCATCTAGTCCCAGGAACCACCCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: KHRAEKEGESRD*APSSPRNHPQG
Trigger: CCCCTGGGGGTGGTTCCTGGGACTAGATGGAGCTCAGTCTCTGGATTCTCCCTCTTTCTCGGCCCTATGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517882.1
ENST00000523161.1
CDS CAA 72 bp GGCCACGGCCCCTCTCCATGCTGCCTCGGGTTTGTTTaGTTTATGTCCTTCCTGACGGGTTCCCGGAAATCG +
Preference number: 6 (lower is better)
Translates to: GHGPSPCCLGFV*FMSFLTGSRKS
Trigger: CGATTTCCGGGAACCCGTCAGGAAGGACATAAACAAAACAAACCCGAGGCAGCATGGAGAGGGGCCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296953.6
ENST00000522692.5
CDS CCA 72 bp TGCTTTCTTGGGTTAAAGGAGGGCGATTACAGGGTTTaGCGGCCAGGTCTGTCAGGAAGCATAGGGCCGAGA +
Preference number: 6 (lower is better)
Translates to: CFLGLKEGDYRV*RPGLSGSIGPR
Trigger: TCTCGGCCCTATGCTTCCTGACAGACCTGGCCGCCAAACCCTGTAATCGCCCTCCTTTAACCCAAGAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517882.1
ENST00000523161.1
CDS CAA 72 bp TTGCTTTCTTGGGTTAAAGGAGGGCGATTACAGGGTTaGGCGGCCAGGTCTGTCAGGAAGCATAGGGCCGAG +
Preference number: 6 (lower is better)
Translates to: LLSWVKGGRLQG*AARSVRKHRAE
Trigger: CTCGGCCCTATGCTTCCTGACAGACCTGGCCGCCAAACCCTGTAATCGCCCTCCTTTAACCCAAGAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517882.1
ENST00000523161.1
CDS GCA 72 bp CTTTGCCACTGCACCACAGTAGCAGGTGTTCTCCTTTaGTGCATCTGTGTGAATCTGGCTCAACAAGGGCCG +
Preference number: 6 (lower is better)
Translates to: LCHCTTVAGVLL*CICVNLAQQGP
Trigger: CGGCCCTTGTTGAGCCAGATTCACACAGATGCAGCAAAGGAGAACACCTGCTACTGTGGTGCAGTGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CAA 90 bp CAGAAAGACTTGCTTTCTTGGGTTAAAGGAGGGCGATTACAGGGTTaGGCGGCCAGGTCTGTCAGGAAGCATAGGGCCGAGAAAGAGGGA +
Preference number: 6 (lower is better)
Translates to: QKDLLSWVKGGRLQG*AARSVRKHRAEKEG
Trigger: TCCCTCTTTCTCGGCCCTATGCTTCCTGACAGACCTGGCCGCCAAACCCTGTAATCGCCCTCCTTTAACCCAAGAAAGCAAGTCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517882.1
ENST00000523161.1
CDS CAA 90 bp TCTCTTGTCTCTTTGCCACTGCACCACAGTAGCAGGTGTTCTCCTTaGCTGCATCTGTGTGAATCTGGCTCAACAAGGGCCGGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: SLVSLPLHHSSRCSP*LHLCESGSTRAGSV
Trigger: AACAGAGCCGGCCCTTGTTGAGCCAGATTCACACAGATGCAGCAAAGGAGAACACCTGCTACTGTGGTGCAGTGGCAAAGAGACAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CAA 90 bp AAGGTAGTCTTAAGGCTCAAGCCAGCTCAGAAACGGCAGAAAGACTaGCTTTCTTGGGTTAAAGGAGGGCGATTACAGGGTTTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: KVVLRLKPAQKRQKD*LSWVKGGRLQGLAA
Trigger: GGCCGCCAAACCCTGTAATCGCCCTCCTTTAACCCAAGAAAGCAAGTCTTTCTGCCGTTTCTGAGCTGGCTTGAGCCTTAAGACTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517882.1
ENST00000523161.1
CDS GCA 72 bp ATGAATCTGAGACTGATGTACTGGCAGAAAGACTGCTaGTCTCTCCTGCTGCAAGTGACCCAGGACCTTCCT +
Preference number: 6 (lower is better)
Translates to: MNLRLMYWQKDC*SLLLQVTQDLP
Trigger: AGGAAGGTCCTGGGTCACTTGCAGCAGGAGAGAGCAGCAGTCTTTCTGCCAGTACATCAGTCTCAGATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CAA 72 bp CACAAATGTAGCAGCTCTACAGTCCCCATCTCCAGTTaGCTAGGAAGGGCTGAATGCCTAGGTACACGGAGT +
Preference number: 6 (lower is better)
Translates to: HKCSSSTVPISS*LGRAECLGTRS
Trigger: ACTCCGTGTACCTAGGCATTCAGCCCTTCCTAGCAAACTGGAGATGGGGACTGTAGAGCTGCTACATTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS CCA 72 bp AGATCTGTGCTCATCAGAGTTTGTTCCGAAAAGGTGTaGCTTCGAAAGGCATCCCCGAAAGGCGGATCCATT +
Preference number: 6 (lower is better)
Translates to: RSVLIRVCSEKV*LRKASPKGGSI
Trigger: AATGGATCCGCCTTTCGGGGATGCCTTTCGAAGCCACACCTTTTCGGAACAAACTCTGATGAGCACAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CCA 72 bp TCTGATCCTCCCCACATTGTGCAATCTGTTCAGGGATaGGAAACCAGAGAGCCAAGTTTGTGGGAATCCTGT +
Preference number: 6 (lower is better)
Translates to: SDPPHIVQSVQG*ETREPSLWESC
Trigger: ACAGGATTCCCACAAACTTGGCTCTCTGGTTTCCCATCCCTGAACAGATTGCACAATGTGGGGAGGATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS GCA 72 bp TCTCGGTTCCACTCAGATGGTCTCAGCATCCTCTCTTaGTGTGATGGTGTAAGTTGTTCACTATACTCCCAG +
Preference number: 6 (lower is better)
Translates to: SRFHSDGLSILS*CDGVSCSLYSQ
Trigger: CTGGGAGTATAGTGAACAACTTACACCATCACAGCAAGAGAGGATGCTGAGACCATCTGAGTGGAACCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296953.6
ENST00000520464.1
CDS CAA 72 bp TTAAGGCTCAAGCCAGCTCAGAAACGGCAGAAAGACTaGCTTTCTTGGGTTAAAGGAGGGCGATTACAGGGT +
Preference number: 6 (lower is better)
Translates to: LRLKPAQKRQKD*LSWVKGGRLQG
Trigger: ACCCTGTAATCGCCCTCCTTTAACCCAAGAAAGCAAGTCTTTCTGCCGTTTCTGAGCTGGCTTGAGCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517882.1
ENST00000523161.1
CDS CAA 90 bp ACGCAGACATTTCTGACCAGTGGTCCAATGAGGCTGATTACACCTTaGATGTTGGTATCCTTAATCCTACAAGGCCTCCAGTGGGATTCC +
Preference number: 6 (lower is better)
Translates to: TQTFLTSGPMRLITP*MLVSLILQGLQWDS
Trigger: GGAATCCCACTGGAGGCCTTGTAGGATTAAGGATACCAACATCAAAGGTGTAATCAGCCTCATTGGACCACTGGTCAGAAATGTCTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS CAA 90 bp ACATTTCTGACCAGTGGTCCAATGAGGCTGATTACACCTTTGATGTaGGTATCCTTAATCCTACAAGGCCTCCAGTGGGATTCCCTTCTG +
Preference number: 6 (lower is better)
Translates to: TFLTSGPMRLITPLM*VSLILQGLQWDSLL
Trigger: CAGAAGGGAATCCCACTGGAGGCCTTGTAGGATTAAGGATACCAACATCAAAGGTGTAATCAGCCTCATTGGACCACTGGTCAGAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS TCA 72 bp TCACTTTCTCCTCAACCCTTCTGGTTATACCAACTGTaGCAGGTCAGAAACCAGCAGCCTCCTAGTCATTTC +
Preference number: 6 (lower is better)
Translates to: SLSPQPFWLYQL*QVRNQQPPSHF
Trigger: GAAATGACTAGGAGGCTGCTGGTTTCTGACCTGTCACAGTTGGTATAACCAGAAGGGTTGAGGAGAAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS CCA 72 bp CTCGTCCTCCTCATCTTCTTCAGGACTGCATTTAGTTaGCTGTTCACCCAAGTTGTCGGAGACAAAAAGAGA +
Preference number: 6 (lower is better)
Translates to: LVLLIFFRTAFS*LFTQVVGDKKR
Trigger: TCTCTTTTTGTCTCCGACAACTTGGGTGAACAGCCAACTAAATGCAGTCCTGAAGAAGATGAGGAGGACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CCA 72 bp CCAGTGGGATTCCCTTCTGCAGTCTTCTCTAACACTTaGTTAACAAATTCTGAGGTTTGCCCAGCAACTGGT +
Preference number: 6 (lower is better)
Translates to: PVGFPSAVFSNT*LTNSEVCPATG
Trigger: ACCAGTTGCTGGGCAAACCTCAGAATTTGTTAACCAAGTGTTAGAGAAGACTGCAGAAGGGAATCCCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS CAA 72 bp ACCAGTGGTCCAATGAGGCTGATTACACCTTTGATGTaGGTATCCTTAATCCTACAAGGCCTCCAGTGGGAT +
Preference number: 6 (lower is better)
Translates to: TSGPMRLITPLM*VSLILQGLQWD
Trigger: ATCCCACTGGAGGCCTTGTAGGATTAAGGATACCAACATCAAAGGTGTAATCAGCCTCATTGGACCACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS CAA 90 bp AGACCGAGAGTATCTTTAATGAGGATTTCAAGCTTCTGCCCCATGTaGGGTCCTCTCTCATCTCTTGGATTCTGTACCCGGTTTACAATC +
Preference number: 6 (lower is better)
Translates to: RPRVSLMRISSFCPM*GPLSSLGFCTRFTI
Trigger: GATTGTAAACCGGGTACAGAATCCAAGAGATGAGAGAGGACCCAACATGGGGCAGAAGCTTGAAATCCTCATTAAAGATACTCTCGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS GCA 72 bp AGACCGAGAGTATCTTTAATGAGGATTTCAAGCTTCTaGCCCATGTTGGGTCCTCTCTCATCTCTTGGATTC +
Preference number: 6 (lower is better)
Translates to: RPRVSLMRISSF*PMLGPLSSLGF
Trigger: GAATCCAAGAGATGAGAGAGGACCCAACATGGGGCAGAAGCTTGAAATCCTCATTAAAGATACTCTCGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS GCA 72 bp ACAGTCCCCATCTCCAGTTTGCTAGGAAGGGCTGAATaGCTAGGTACACGGAGTAAACATTATGGATTAGTA +
Preference number: 6 (lower is better)
Translates to: TVPISSLLGRAE*LGTRSKHYGLV
Trigger: TACTAATCCATAATGTTTACTCCGTGTACCTAGGCATTCAGCCCTTCCTAGCAAACTGGAGATGGGGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS CCA 72 bp TTGATGTTGGTATCCTTAATCCTACAAGGCCTCCAGTaGGATTCCCTTCTGCAGTCTTCTCTAACACTTGGT +
Preference number: 6 (lower is better)
Translates to: LMLVSLILQGLQ*DSLLQSSLTLG
Trigger: ACCAAGTGTTAGAGAAGACTGCAGAAGGGAATCCCACTGGAGGCCTTGTAGGATTAAGGATACCAACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS CAA 72 bp TTTCTGACCAGTGGTCCAATGAGGCTGATTACACCTTaGATGTTGGTATCCTTAATCCTACAAGGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: FLTSGPMRLITP*MLVSLILQGLQ
Trigger: CTGGAGGCCTTGTAGGATTAAGGATACCAACATCAAAGGTGTAATCAGCCTCATTGGACCACTGGTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS CAA 72 bp AGTAAGAATCTCTACACTAAAGTGCAAACTGCAGGCTaGACAGCTCTGGGACCTTTTGTCCTCCATGAAAGG +
Preference number: 6 (lower is better)
Translates to: SKNLYTKVQTAG*TALGPFVLHER
Trigger: CCTTTCATGGAGGACAAAAGGTCCCAGAGCTGTCAAGCCTGCAGTTTGCACTTTAGTGTAGAGATTCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS CAA 90 bp TTACCGAGAGTATCTTTAATGAGGATTTCAAGCTTCTGCCCCATGTaGGGTCCTCTCTCATCTCTTGGATTCTGTACCCGGTTTACAATC +
Preference number: 6 (lower is better)
Translates to: LPRVSLMRISSFCPM*GPLSSLGFCTRFTI
Trigger: GATTGTAAACCGGGTACAGAATCCAAGAGATGAGAGAGGACCCAACATGGGGCAGAAGCTTGAAATCCTCATTAAAGATACTCTCGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS GCA 72 bp TTACCGAGAGTATCTTTAATGAGGATTTCAAGCTTCTaGCCCATGTTGGGTCCTCTCTCATCTCTTGGATTC +
Preference number: 6 (lower is better)
Translates to: LPRVSLMRISSF*PMLGPLSSLGF
Trigger: GAATCCAAGAGATGAGAGAGGACCCAACATGGGGCAGAAGCTTGAAATCCTCATTAAAGATACTCTCGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS TCA 72 bp AGCACAGAATTAATCCATATGGAAGCAGGAGGTAAGTaGTTGCTGAGGAAAATACTGGCGATTAGGGTCTAC +
Preference number: 6 (lower is better)
Translates to: STELIHMEAGGK*LLRKILAIRVY
Trigger: GTAGACCCTAATCGCCAGTATTTTCCTCAGCAATCACTTACCTCCTGCTTCCATATGGATTAATTCTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS CCA 72 bp TTGAGGCCCCATAATTTCACTTTATTAGCTTCATACTaGGCTTTCTTCTTTAACCGACAAGCTCTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: LRPHNFTLLASY*AFFFNRQALEA
Trigger: GGCTTCCAGAGCTTGTCGGTTAAAGAAGAAAGCCCAGTATGAAGCTAATAAAGTGAAATTATGGGGCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296953.6
ENST00000520464.1
CDS TCA 72 bp TTGAGGTTAAAGCACCCTCATTATCCAGGACATCTGTaGAAGACTCCAGATTTTCAATGTCTTTGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: LRLKHPHYPGHL*KTPDFQCLCSP
Trigger: AGGACTGCAAAGACATTGAAAATCTGGAGTCTTTCACAGATGTCCTGGATAATGAGGGTGCTTTAACCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS GCA 72 bp GTCTTCTCTAACACTTGGTTAACAAATTCTGAGGTTTaGCCAGCAACTGGTAGACCGAGAGTATCTTTAATG +
Preference number: 6 (lower is better)
Translates to: VFSNTWLTNSEV*PATGRPRVSLM
Trigger: CATTAAAGATACTCTCGGTCTACCAGTTGCTGGGCAAACCTCAGAATTTGTTAACCAAGTGTTAGAGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296953.6
CDS CCA 72 bp CTTCTTTTGTTCCCCAGATGTCACAGCTGGTTAGTTTaGTATATTTCGTTAGGTCTTCACAGTATGTATCCC +
Preference number: 6 (lower is better)
Translates to: LLLFPRCHSWLV*YISLGLHSMYP
Trigger: GGGATACATACTGTGAAGACCTAACGAAATATACCAAACTAACCAGCTGTGACATCTGGGGAACAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CAA 90 bp AGTAAAACAAGTAAGAATCTCTACACTAAAGTGCAAACTGCAGGCTaGACAGCTCTGGGACCTTTTGTCCTCCATGAAAGGTTAAAGTTG +
Preference number: 6 (lower is better)
Translates to: SKTSKNLYTKVQTAG*TALGPFVLHERLKL
Trigger: CAACTTTAACCTTTCATGGAGGACAAAAGGTCCCAGAGCTGTCAAGCCTGCAGTTTGCACTTTAGTGTAGAGATTCTTACTTGTTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS CAA 90 bp TCATTATCCAGGACATCTGTGAAAGACTCCAGATTTTCAATGTCTTaGCAGTCCTCCAAAGAAAGAAAGTTGTCTCTAGGATTCTGTTGG +
Preference number: 6 (lower is better)
Translates to: SLSRTSVKDSRFSMS*QSSKERKLSLGFCW
Trigger: CCAACAGAATCCTAGAGACAACTTTCTTTCTTTGGAGGACTGCAAAGACATTGAAAATCTGGAGTCTTTCACAGATGTCCTGGATAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS TCA 72 bp GTCCTCAAAAATCCTTTGCAACTCACATTCGTACGATaGGTGAATAACCTGTTTACTGACCATCACACTTAC +
Preference number: 6 (lower is better)
Translates to: VLKNPLQLTFVR*VNNLFTDHHTY
Trigger: GTAAGTGTGATGGTCAGTAAACAGGTTATTCACTCATCGTACGAATGTGAGTTGCAAAGGATTTTTGAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS CAA 72 bp ACTTCTTTTGTTCCCCAGATGTCACAGCTGGTTAGTTaGGTATATTTCGTTAGGTCTTCACAGTATGTATCC +
Preference number: 6 (lower is better)
Translates to: TSFVPQMSQLVS*VYFVRSSQYVS
Trigger: GGATACATACTGTGAAGACCTAACGAAATATACCAAACTAACCAGCTGTGACATCTGGGGAACAAAAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS CAA 90 bp TATACTCCCAGAAGTATCTTCTTTTACCTCTCTTCCGTGAAGATATaGAAGTCACCTCCTTCAGGTCTTCTACAGAATCATTTTCATAGC +
Preference number: 6 (lower is better)
Translates to: YTPRSIFFYLSSVKI*KSPPSGLLQNHFHS
Trigger: GCTATGAAAATGATTCTGTAGAAGACCTGAAGGAGGTGACTTCAATATCTTCACGGAAGAGAGGTAAAAGAAGATACTTCTGGGAGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296953.6
ENST00000520464.1
CDS CCA 72 bp TCTAGTTCCAGCATGACAGATTCTTCATTATTTGCATaGCATACTAAGCATCTCAAATCTCAGGATGAGTAT +
Preference number: 6 (lower is better)
Translates to: SSSSMTDSSLFA*HTKHLKSQDEY
Trigger: ATACTCATCCTGAGATTTGAGATGCTTAGTATGCCATGCAAATAATGAAGAATCTGTCATGCTGGAACTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520464.1
CDS CAA 90 bp CCTCTCTCATCTCTTGGATTCTGTACCCGGTTTACAATCTCTTGCTaGATGGAGTTGATTACAAACAATAAATTATCATATTCTGTGTTG +
Preference number: 6 (lower is better)
Translates to: PLSSLGFCTRFTISC*MELITNNKLSYSVL
Trigger: CAACACAGAATATGATAATTTATTGTTTGTAATCAACTCCATCAAGCAAGAGATTGTAAACCGGGTACAGAATCCAAGAGATGAGAGAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296953.6
ENST00000520464.1
CDS TCA 72 bp GAATCAGAAACAGACTGTGAGTCCTCACTATTAAGTTaGGCTAAAGTTGGAGTTTTACTTATAACCTCTTCA +
Preference number: 6 (lower is better)
Translates to: ESETDCESSLLS*AKVGVLLITSS
Trigger: TGAAGAGGTTATAAGTAAAACTCCAACTTTAGCTCAACTTAATAGTGAGGACTCACAGTCTGTTTCTGATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS TCA 72 bp TCACCTTTTCATTATGATACATGTTGGTCTTCACCATaGTTTGTGTGCTTGAAGTGGGTTTACTTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: SPFHYDTCWSSP*FVCLKWVYLLF
Trigger: AAAAAGCAAGTAAACCCACTTCAAGCACACAAATCATGGTGAAGACCAACATGTATCATAATGAAAAGGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296953.6
ENST00000520420.5
ENST00000520464.1
ENST00000522692.5
CDS GCA 72 bp TCATCTCTTGGATTCTGTACCCGGTTTACAATCTCTTaGTTGATGGAGTTGATTACAAACAATAAATTATCA +
Preference number: 6 (lower is better)
Translates to: SSLGFCTRFTIS*LMELITNNKLS
Trigger: TGATAATTTATTGTTTGTAATCAACTCCATCAAGCAAGAGATTGTAAACCGGGTACAGAATCCAAGAGATGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296953.6
ENST00000520464.1