RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CREB5 (Homo sapiens)

Ensembl gene IDs: ENSG00000146592

Ensembl transcript IDs: ENST00000357727.7, ENST00000396298.6, ENST00000396299.6, ENST00000396300.6, ENST00000409603.5, ENST00000424599.5, ENST00000426500.5, ENST00000461921.5, ENST00000468391.5, ENST00000469531.1, ENST00000478078.1, ENST00000482692.1, ENST00000484383.1, ENST00000498316.3

Found 670 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGAGCTGGCTGAGGGTGGAGCTTCCTACCACCTCGCTGACCGATaGGGAAGTAGTGATGGTATTATGCTGGATGACTTGTTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: GELAEGGASYHLADR*GSSDGIMLDDLLLG
Trigger: TCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAAGCTCCACCCTCAGCCAGCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR CCA 90 bp CCTACCACCTCGCTGACCGATGAGGAAGTAGTGATGGTATTATGCTaGATGACTTGTTGCTGGGAGCAAGCTGGGACAGGACTAGCAGGA +
Preference number: 1 (lower is better)
Translates to: PTTSLTDEEVVMVLC*MTCCWEQAGTGLAG
Trigger: TCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR TCA 90 bp ATAAGGCAGGGGAGGCACTATAGACGTTCCCAGGGAGGCTGGCAGTaGCTTCAGAGACAGATCTCACCGATCAAGAAAACCACACACGAA +
Preference number: 1 (lower is better)
Translates to: IRQGRHYRRSQGGWQ*LQRQISPIKKTTHE
Trigger: TTCGTGTGTGGTTTTCTTGATCGGTGAGATCTGTCTCTGAAGTCACTGCCAGCCTCCCTGGGAACGTCTATAGTGCCTCCCCTGCCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR TCA 90 bp TGCTTGTCTCCCACAGGCTGTGTTAAGACTGTGACTTGCATCCGTTaGTGTGGCCGCAGGAGAGGGCTGAGTAGTAGTGTAACGGGAAAA +
Preference number: 1 (lower is better)
Translates to: CLSPTGCVKTVTCIR*CGRRRGLSSSVTGK
Trigger: TTTTCCCGTTACACTACTACTCAGCCCTCTCCTGCGGCCACATCAACGGATGCAAGTCACAGTCTTAACACAGCCTGTGGGAGACAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR GCA 90 bp CTGACCGATGAGGAAGTAGTGATGGTATTATGCTGGATGACTTGTTaGTGGGAGCAAGCTGGGACAGGACTAGCAGGAGGGCTACTCTCT +
Preference number: 1 (lower is better)
Translates to: LTDEEVVMVLCWMTC*WEQAGTGLAGGLLS
Trigger: AGAGAGTAGCCCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTCATCGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR GCA 90 bp CTTCCTACCACCTCGCTGACCGATGAGGAAGTAGTGATGGTATTATaGTGGATGACTTGTTGCTGGGAGCAAGCTGGGACAGGACTAGCA +
Preference number: 1 (lower is better)
Translates to: LPTTSLTDEEVVMVL*WMTCCWEQAGTGLA
Trigger: TGCTAGTCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR CCA 90 bp ACCGATGAGGAAGTAGTGATGGTATTATGCTGGATGACTTGTTGCTaGGAGCAAGCTGGGACAGGACTAGCAGGAGGGCTACTCTCTGGA +
Preference number: 1 (lower is better)
Translates to: TDEEVVMVLCWMTCC*EQAGTGLAGGLLSG
Trigger: TCCAGAGAGTAGCCCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTCATCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR TCA 90 bp ACTGGCTCTTCTCCTTGGCATTCTTGTAGTAGGCTTCACCTAGGCTaGTGTGAGACACAGGTCTCAGCTGTGCTACCAATGGACGCACAT +
Preference number: 1 (lower is better)
Translates to: TGSSPWHSCSRLHLG*CETQVSAVLPMDAH
Trigger: ATGTGCGTCCATTGGTAGCACAGCTGAGACCTGTGTCTCACATCAGCCTAGGTGAAGCCTACTACAAGAATGCCAAGGAGAAGAGCCAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 90 bp GAAATCGATAGGGCCACTGTTCTTTCAGTGGCCTCAGAGAGTCTATaGCTAGGACAACAGTCAGATGTGCACCAGGGTGCACAAAAGAAT +
Preference number: 1 (lower is better)
Translates to: EIDRATVLSVASESL*LGQQSDVHQGAQKN
Trigger: ATTCTTTTGTGCACCCTGGTGCACATCTGACTGTTGTCCTAGCCATAGACTCTCTGAGGCCACTGAAAGAACAGTGGCCCTATCGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR TCA 90 bp AGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTaGTGGTGCATTTTAAAGAATCGGATTCAGGTCTGTTCTGTGAGT +
Preference number: 1 (lower is better)
Translates to: RKDAWYATALLGGQV*WCILKNRIQVCSVS
Trigger: ACTCACAGAACAGACCTGAATCCGATTCTTTAAAATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR CCA 90 bp GAAGGGAAAAAGGTGAGTAGGTTGTATTTTCTACTGGCTGCTGGTTaGGAAGGGTCCTTTCTCTTAAACTCCCTCCACTCAACACAACTG +
Preference number: 1 (lower is better)
Translates to: EGKKVSRLYFLLAAG*EGSFLLNSLHSTQL
Trigger: CAGTTGTGTTGAGTGGAGGGAGTTTAAGAGAAAGGACCCTTCCCAACCAGCAGCCAGTAGAAAATACAACCTACTCACCTTTTTCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR GCA 90 bp GAATGGCTTGTTTCAAGGAGGCACGACTGTGGTTCAGGGACTATCTaGTTTGTATCACGGGCAAGTTCACAAAAGTTGTTGAAAATAAAT +
Preference number: 1 (lower is better)
Translates to: EWLVSRRHDCGSGTI*FVSRASSQKLLKIN
Trigger: ATTTATTTTCAACAACTTTTGTGAACTTGCCCGTGATACAAAGCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAACAAGCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR GCA 90 bp CTAAGTCACCCTAATTACTATAATATATACTGTGAGCACACAAACTaGTTGTCTCCCACAGGCTGTGTTAAGACTGTGACTTGCATCCGT +
Preference number: 1 (lower is better)
Translates to: LSHPNYYNIYCEHTN*LSPTGCVKTVTCIR
Trigger: ACGGATGCAAGTCACAGTCTTAACACAGCCTGTGGGAGACAAGCAGTTTGTGTGCTCACAGTATATATTATAGTAATTAGGGTGACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR TCA 90 bp AAGAATAAGTCTCCTGGCTTATTCAGGACACTTTGGTTTGGAAGGTaGGAGAAAATTCTTAAGTATAGCTTAGCTGCTGCCTCACATCTG +
Preference number: 1 (lower is better)
Translates to: KNKSPGLFRTLWFGR*EKILKYSLAAASHL
Trigger: CAGATGTGAGGCAGCAGCTAAGCTATACTTAAGAATTTTCTCTCACCTTCCAAACCAAAGTGTCCTGAATAAGCCAGGAGACTTATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 90 bp TTGTTTCCTTTCCCTTCTCAGATATACTGCATAATGGAGCTTGAATaGCTTAAAGCTACTGCATATTGTTCGGGAAGGGACAAAAAGCAC +
Preference number: 1 (lower is better)
Translates to: LFPFPSQIYCIMELE*LKATAYCSGRDKKH
Trigger: GTGCTTTTTGTCCCTTCCCGAACAATATGCAGTAGCTTTAAGCCATTCAAGCTCCATTATGCAGTATATCTGAGAAGGGAAAGGAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR TCA 90 bp AAGGCCCTGAGTAGAACAAGAAGACAGTTTATTCTAATTATATGTTaGGGCCGGTTTGCTAATGTGTGTGGTTGGTTTTCCTACTTAGCA +
Preference number: 1 (lower is better)
Translates to: KALSRTRRQFILIIC*GRFANVCGWFSYLA
Trigger: TGCTAAGTAGGAAAACCAACCACACACATTAGCAAACCGGCCTCAACATATAATTAGAATAAACTGTCTTCTTGTTCTACTCAGGGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR TCA 90 bp ACAACTAGTTGGAATCTTTCATTTACTGTATTTCCATACCGTGAATaGACACACCTAAAGGCCCTGAGTAGAACAAGAAGACAGTTTATT +
Preference number: 1 (lower is better)
Translates to: TTSWNLSFTVFPYRE*THLKALSRTRRQFI
Trigger: AATAAACTGTCTTCTTGTTCTACTCAGGGCCTTTAGGTGTGTTCATTCACGGTATGGAAATACAGTAAATGAAAGATTCCAACTAGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR TCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCACACCTCGCTGACCGATaGGGAAGTAGTGATGGTATT +
Preference number: 2 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAHLADR*GSSDGI
Trigger: AATACCATCACTACTTCCTCATCGGTCAGCGAGGTG...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR-3UTR CCA 90 bp GATGAGGAAGTAGTGATGGTATTATGCTGGATGACTTGTTGCTGGGAGCAAGCTCGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 2 (lower is better)
Translates to: DEEVVMVLCWMTCCWEQARYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...AGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR-3UTR TCA 90 bp ACAGTAGAATGGCTTGTTTCAAGGAGGCACGACTGTGGTTCAGGGACTATCTGCGTGAAAAGCAAGAGTTaGATGAACTCCAGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: TVEWLVSRRHDCGSGTICVKSKS*MNSSCG
Trigger: CCCACAGCTGGAGTTCATTCAACTCTTGCTTTTCAC...GCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAACAAGCCATTCTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CCA 90 bp ACACACACACACATTAAGAGGTCAAGCATTCAAATGGAGATGAAACACCAGCACCGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 2 (lower is better)
Translates to: THTHIKRSSIQMEMKHQHRYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...GTGCTGGTGTTTCATCTCCATTTGAATGCTTGACCTCTTAATGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR TCA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCACTCAAAACCATCTTTTaGAAGCACTGCATACAAGGA +
Preference number: 2 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSLKTIF*KHCIQG
Trigger: TCCTTGTATGCAGTGCTTTCAAAAGATGGTTTTGAG...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTCGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 2 (lower is better)
Translates to: TTAQTQHELRCQKISYPVRYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
3UTR-3UTR CCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGCGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 2 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMRYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
3UTR-3UTR TCA 90 bp CAGTCAAACTGTCAAGTTGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACTGCAAAGCAAGAGTTGAATaGACTCCAGCTGTGGGTGAA +
Preference number: 2 (lower is better)
Translates to: QSNCQVAERRKLRQVLNCKARVE*TPAVGE
Trigger: TTCACCCACAGCTGGAGTTCATTCAACTCTTGCTTT...GCAGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR TCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTATGAAAGCCAGTCTTTaGAGAACTGAGGAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGMKASL*RTEESS
Trigger: GGAAGACTCCTCAGTTCTTCAAAGACTGGCTTTCAT...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
3UTR-3UTR GCA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATGGTTCAGGGACTATCTaGTTTGTATCACGGGCAAGT +
Preference number: 2 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYGSGTI*FVSRAS
Trigger: ACTTGCCCGTGATACAAAGCAGATAGTCCCTGAACC...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CCA 90 bp CAGTCAAACTGTCAAGTTGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACTGCCCCCTATGGAAACACTaGGTTTTCTTTCTCTCTTTG +
Preference number: 2 (lower is better)
Translates to: QSNCQVAERRKLRQVLNCPLWKH*VFFLSL
Trigger: CAAAGAGAGAAAGAAAACCCAGTGTTTCCATAGGGG...GCAGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR TCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATATGAAAGCCAGTCTTTaGAGAACTGAGGAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINMKASL*RTEESS
Trigger: GGAAGACTCCTCAGTTCTTCAAAGACTGGCTTTCAT...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
3UTR-3UTR CCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTCTGGTACCAGAAAACTaGAGAAAAGCACCAAAGCGT +
Preference number: 2 (lower is better)
Translates to: TTAQTQHELRCQKISYPVLVPEN*RKAPKR
Trigger: ACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAG...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
3UTR CAA 90 bp GACATAATTGAGCTATATATAATGCACATCAGTCAAACTGTCAAGTaGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACTGCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: DIIELYIMHISQTVK*LNEENSGKFLTAEA
Trigger: AGCCTCGGCAGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTGATGTGCATTATATATAGCTCAATTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CAA 90 bp ATAGAGGTGCTGTCCCTAATTATGTTACAAGGCAACATTGTATTTTaGAGACCTAGGAATGAAATCGATAGGGCCACTGTTCTTTCAGTG +
Preference number: 2 (lower is better)
Translates to: IEVLSLIMLQGNIVF*RPRNEIDRATVLSV
Trigger: CACTGAAAGAACAGTGGCCCTATCGATTTCATTCCTAGGTCTCAAAAATACAATGTTGCCTTGTAACATAATTAGGGACAGCACCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR TCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTATGAAAGCCAGTCTTTaGAGAACTGAGGAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFMKASL*RTEESS
Trigger: GGAAGACTCCTCAGTTCTTCAAAGACTGGCTTTCAT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
3UTR-3UTR CCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTAAAAGAAAGGACGCATaGTACGCTACAGCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: TTAQTQHELRCQKISYPVKRKDA*YATALL
Trigger: AAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTT...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
3UTR-3UTR CCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTCTGGTACCAGAAAACTaGAGAAAAGCACCAAAGCGT +
Preference number: 2 (lower is better)
Translates to: NSGDTTAQTQHELRCQKILVPEN*RKAPKR
Trigger: ACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAG...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
3UTR-3UTR TCA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATGATTTTCAGGCAGATTaGTTATTCTGTTGTCTGGTG +
Preference number: 2 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYDFQAD*LFCCLV
Trigger: CACCAGACAACAGAATAATCAATCTGCCTGAAAATC...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTTTTCAGGCAAAGGGTTaGACTGATAAGAATGAAACC +
Preference number: 2 (lower is better)
Translates to: TTAQTQHELRCQKISYPVFQAKG*TDKNET
Trigger: GGTTTCATTCTTATCAGTCCAACCCTTTGCCTGAAA...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
3UTR TCA 72 bp CAAACTGCTTGTCTCCCACAGGCTGTGTTAAGACTGTaGCTTGCATCCGTTGATGTGGCCGCAGGAGAGGGC +
Preference number: 3 (lower is better)
Translates to: QTACLPQAVLRL*LASVDVAAGEG
Trigger: GCCCTCTCCTGCGGCCACATCAACGGATGCAAGTCACAGTCTTAACACAGCCTGTGGGAGACAAGCAGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR TCA 72 bp CCCACAGGCTGTGTTAAGACTGTGACTTGCATCCGTTaGTGTGGCCGCAGGAGAGGGCTGAGTAGTAGTGTA +
Preference number: 3 (lower is better)
Translates to: PTGCVKTVTCIR*CGRRRGLSSSV
Trigger: TACACTACTACTCAGCCCTCTCCTGCGGCCACATCAACGGATGCAAGTCACAGTCTTAACACAGCCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 72 bp AGGGCCACTGTTCTTTCAGTGGCCTCAGAGAGTCTATaGCTAGGACAACAGTCAGATGTGCACCAGGGTGCA +
Preference number: 3 (lower is better)
Translates to: RATVLSVASESL*LGQQSDVHQGA
Trigger: TGCACCCTGGTGCACATCTGACTGTTGTCCTAGCCATAGACTCTCTGAGGCCACTGAAAGAACAGTGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR TCA 72 bp GCTGAGGGTGGAGCTTCCTACCACCTCGCTGACCGATaGGGAAGTAGTGATGGTATTATGCTGGATGACTTG +
Preference number: 3 (lower is better)
Translates to: AEGGASYHLADR*GSSDGIMLDDL
Trigger: CAAGTCATCCAGCATAATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAAGCTCCACCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR GCA 72 bp GAGGAAGTAGTGATGGTATTATGCTGGATGACTTGTTaGTGGGAGCAAGCTGGGACAGGACTAGCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: EEVVMVLCWMTC*WEQAGTGLAGG
Trigger: CCCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR GCA 72 bp ACCTCGCTGACCGATGAGGAAGTAGTGATGGTATTATaGTGGATGACTTGTTGCTGGGAGCAAGCTGGGACA +
Preference number: 3 (lower is better)
Translates to: TSLTDEEVVMVL*WMTCCWEQAGT
Trigger: TGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTCATCGGTCAGCGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR CCA 72 bp TCGCTGACCGATGAGGAAGTAGTGATGGTATTATGCTaGATGACTTGTTGCTGGGAGCAAGCTGGGACAGGA +
Preference number: 3 (lower is better)
Translates to: SLTDEEVVMVLC*MTCCWEQAGTG
Trigger: TCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTCATCGGTCAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR TCA 72 bp TCTCCTTGGCATTCTTGTAGTAGGCTTCACCTAGGCTaGTGTGAGACACAGGTCTCAGCTGTGCTACCAATG +
Preference number: 3 (lower is better)
Translates to: SPWHSCSRLHLG*CETQVSAVLPM
Trigger: CATTGGTAGCACAGCTGAGACCTGTGTCTCACATCAGCCTAGGTGAAGCCTACTACAAGAATGCCAAGGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 72 bp CACAGTAGAATGGCTTGTTTCAAGGAGGCACGACTGTaGTTCAGGGACTATCTGCTTTGTATCACGGGCAAG +
Preference number: 3 (lower is better)
Translates to: HSRMACFKEARL*FRDYLLCITGK
Trigger: CTTGCCCGTGATACAAAGCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAACAAGCCATTCTACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CAA 90 bp ACAGTAGAATGGCTTGTTTCAAGGAGGCACGACTGTGGTTCAGGGACTATCTGCGCCCCACATCAAAATTaGGACTTTCGCAATCAAGGC +
Preference number: 3 (lower is better)
Translates to: TVEWLVSRRHDCGSGTICAPHQN*DFRNQG
Trigger: GCCTTGATTGCGAAAGTCCAAATTTTGATGTGGGGC...GCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAACAAGCCATTCTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CAA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCATTATGCTGGATGACTaGTTGCTGGGAGCAAGCTGG +
Preference number: 3 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAIMLDD*LLGASW
Trigger: CCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAAT...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR TCA 72 bp GCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTaGTGGTGCATTTTAAAGAATCGGATTCAGGTCTGT +
Preference number: 3 (lower is better)
Translates to: AWYATALLGGQV*WCILKNRIQVC
Trigger: ACAGACCTGAATCCGATTCTTTAAAATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498316.3
3UTR TCA 72 bp AATCCCAACACTTTGGGAGGAAGAAGTAGGATAGTTTaGGACCAGCCTGGGCAACATAAGACAGACCTCATC +
Preference number: 3 (lower is better)
Translates to: NPNTLGGRSRIV*DQPGQHKTDLI
Trigger: GATGAGGTCTGTCTTATGTTGCCCAGGCTGGTCTCAAACTATCCTACTTCTTCCTCCCAAAGTGTTGGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR GCA 72 bp GTTTCAAGGAGGCACGACTGTGGTTCAGGGACTATCTaGTTTGTATCACGGGCAAGTTCACAAAAGTTGTTG +
Preference number: 3 (lower is better)
Translates to: VSRRHDCGSGTI*FVSRASSQKLL
Trigger: CAACAACTTTTGTGAACTTGCCCGTGATACAAAGCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 72 bp GCTGATGTGAGACACAGGTCTCAGCTGTGCTACCAATaGACGCACATAAATGTACCTGGTGCAAATATCTGT +
Preference number: 3 (lower is better)
Translates to: ADVRHRSQLCYQ*THINVPGANIC
Trigger: ACAGATATTTGCACCAGGTACATTTATGTGCGTCCATTGGTAGCACAGCTGAGACCTGTGTCTCACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CAA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATAACGCTACAGCTCTTCTaGGAGGCCAGGTCTGATGGT +
Preference number: 3 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLITLQLF*EARSDG
Trigger: ACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGT...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
3UTR-3UTR CAA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGACGCTACAGCTCTTCTaGGAGGCCAGGTCTGATGGT +
Preference number: 3 (lower is better)
Translates to: TQHELRCQKISYPVTLDLTLQLF*EARSDG
Trigger: ACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGT...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
3UTR-3UTR CAA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCTTGGATCTGTCTTACTaGACATCTAGGTATACCTCA +
Preference number: 3 (lower is better)
Translates to: EENWALASGPRGGEVKRCLDLSY*TSRYTS
Trigger: TGAGGTATACCTAGATGTCAAGTAAGACAGATCCAA...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
3UTR-3UTR CAA 90 bp ACAGTAGAATGGCTTGTTTCAAGGAGGCACGACTGTGGTTCAGGGACTATCTGCTATAATCCCAACACTTaGGGAGGAAGAAGTAGGATA +
Preference number: 3 (lower is better)
Translates to: TVEWLVSRRHDCGSGTICYNPNT*GGRSRI
Trigger: TATCCTACTTCTTCCTCCCAAAGTGTTGGGATTATA...GCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAACAAGCCATTCTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CAA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTACGCTACAGCTCTTCTaGGAGGCCAGGTCTGATGGT +
Preference number: 3 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVTLQLF*EARSDG
Trigger: ACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGT...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
3UTR TCA 72 bp GTTTACCTGATAGAAATGCTCTCAGGTGTACTTATCTaGGTTGTTAACTCCCATCACATAAGGCAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: VYLIEMLSGVLI*VVNSHHIRQGR
Trigger: CCTCCCCTGCCTTATGTGATGGGAGTTAACAACTCAGATAAGTACACCTGAGAGCATTTCTATCAGGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 72 bp ACACTTGGCTTTCAAATTAGTACATTCATCCATGGCTaGGATTTTCACTCTACCTCTCCTGGCTTCGTGGAT +
Preference number: 3 (lower is better)
Translates to: TLGFQISTFIHG*DFHSTSPGFVD
Trigger: ATCCACGAAGCCAGGAGAGGTAGAGTGAAAATCCCAGCCATGGATGAATGTACTAATTTGAAAGCCAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CAA 90 bp ACACACACACACATTAAGAGGTCAAGCATTCAAATGGAGATGAAACACCAGCACTCCTACCCAGTTACCTaGGATCTGTCTTACTTGACA +
Preference number: 3 (lower is better)
Translates to: THTHIKRSSIQMEMKHQHSYPVT*DLSYLT
Trigger: TGTCAAGTAAGACAGATCCAAGGTAACTGGGTAGGA...GTGCTGGTGTTTCATCTCCATTTGAATGCTTGACCTCTTAATGTGTGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CAA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATCAGGGACTATCTGCTTaGTATCACGGGCAAGTTCAC +
Preference number: 3 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYQGLSA*YHGQVH
Trigger: GTGAACTTGCCCGTGATACAAAGCAGATAGTCCCTG...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 72 bp ATGGCTGGGATTTTCACTCTACCTCTCCTGGCTTCGTaGATTGAGAAATGTGTCAAGGAGAAACAATTAAGA +
Preference number: 3 (lower is better)
Translates to: MAGIFTLPLLAS*IEKCVKEKQLR
Trigger: TCTTAATTGTTTCTCCTTGACACATTTCTCAATCCACGAAGCCAGGAGAGGTAGAGTGAAAATCCCAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 72 bp TTCCCTTCTCAGATATACTGCATAATGGAGCTTGAATaGCTTAAAGCTACTGCATATTGTTCGGGAAGGGAC +
Preference number: 3 (lower is better)
Translates to: FPSQIYCIMELE*LKATAYCSGRD
Trigger: GTCCCTTCCCGAACAATATGCAGTAGCTTTAAGCCATTCAAGCTCCATTATGCAGTATATCTGAGAAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 72 bp AAACTCCCCAGCCAAAGGCTTGTCTGTTACCGCAGCTaGTTTATGATTTTAATGACAAACTCAACTTACACA +
Preference number: 3 (lower is better)
Translates to: KLPSQRLVCYRS*FMILMTNSTYT
Trigger: TGTGTAAGTTGAGTTTGTCATTAAAATCATAAACCAGCTGCGGTAACAGACAAGCCTTTGGCTGGGGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CAA 90 bp ATTGCTGCTGTGTCGTCTTATCCTACCTTAGATTATAATTGTGAAATAGAGGTGTCCTGGCTTCGTGGATaGAGAAATGTGTCAAGGAGA +
Preference number: 3 (lower is better)
Translates to: IAAVSSYPTLDYNCEIEVSWLRG*RNVSRR
Trigger: TCTCCTTGACACATTTCTCAATCCACGAAGCCAGGA...CACCTCTATTTCACAATTATAATCTAAGGTAGGATAAGACGACACAGCAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR GCA 72 bp CCTAATTACTATAATATATACTGTGAGCACACAAACTaGTTGTCTCCCACAGGCTGTGTTAAGACTGTGACT +
Preference number: 3 (lower is better)
Translates to: PNYYNIYCEHTN*LSPTGCVKTVT
Trigger: AGTCACAGTCTTAACACAGCCTGTGGGAGACAAGCAGTTTGTGTGCTCACAGTATATATTATAGTAATTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR TCA 72 bp TGGAATCTTTCATTTACTGTATTTCCATACCGTGAATaGACACACCTAAAGGCCCTGAGTAGAACAAGAAGA +
Preference number: 3 (lower is better)
Translates to: WNLSFTVFPYRE*THLKALSRTRR
Trigger: TCTTCTTGTTCTACTCAGGGCCTTTAGGTGTGTTCATTCACGGTATGGAAATACAGTAAATGAAAGATTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR-3UTR CAA 90 bp CCTTCTGAATTATTATGTAGTACATGGATTTTCAACGTTATAGGCAGGCCGTATGCTTGGTGGTATTATTaGGACATCAATGGATCTTAT +
Preference number: 3 (lower is better)
Translates to: PSELLCSTWIFNVIGRPYAWWYY*DINGSY
Trigger: ATAAGATCCATTGATGTCCAAATAATACCACCAAGC...ATACGGCCTGCCTATAACGTTGAAAATCCATGTACTACATAATAATTCAGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CCA 72 bp TTCAGGCAAAGGGTTGGACTGATAAGAATGAAACCATaGCTATATACAGAAAAGGTTCAGTTTATAAACAAG +
Preference number: 3 (lower is better)
Translates to: FRQRVGLIRMKP*LYTEKVQFINK
Trigger: CTTGTTTATAAACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCAGCAGGGTCCCAGGCATaGAGGCTGGCATGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAAGSQA*RLAWAV
Trigger: GACAGCCCATGCCAGCCTCCATGCCTGGGACCCTGC...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCAGGGTGCGAGTGCATGTaGTGGTGTGGCGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAGCECM*WCGVWS
Trigger: GGACCAGACGCCACACCATCACATGCACTCGCACCC...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGCGCTGCTAAGCTGGTaGGTTCCGGGCCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARALLSW*VPGPVM
Trigger: CATGACGGGGCCCGGAACTCACCAGCTTAGCAGCGC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGGGTGCGAGTGCATGTaGTGGTGTGGCGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHGCECM*WCGVWS
Trigger: GGACCAGACGCCACACCATCACATGCACTCGCACCC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGCTTGGTTGCCGGTGTaGAGGGGCGGATGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARAWLPV*RGGCGE
Trigger: CTCGCCACATCCGCCCCTGCACACCGGCAACCAAGC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGTGCAGGGGCGGATGTaGCGAGGTCTGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHVQGRM*RGLVMC
Trigger: GCACATCACCAGACCTCGCCACATCCGCCCCTGCAC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCACCCTGTGGGCTGGGGTaGCTGTATTGTCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAPCGLG*LYCLGW
Trigger: CCAACCCAGACAATACAGCCACCCCAGCCCACAGGG...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATTCTGTCTGCAGCGGGTaGCAGCTGCCCGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHSVCSG*QLPGSV
Trigger: AACGGAACCGGGCAGCTGCCACCCGCTGCAGACAGA...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCTTCCTGAGCCTTCCTaGACTCGTGCTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHLPEPS*TRAPGS
Trigger: GCTCCCTGGAGCACGAGTTCAGGAAGGCTCAGGAAG...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATATGACAGAGCTGGACTaGGGCGACGGCATGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHMTELD*GDGMAC
Trigger: GCAAGCCATGCCGTCGCCTCAGTCCAGCTCTGTCAT...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGGCAGTGTCTGGTGCTaGTGCGGGTGCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARGSVWC*CGCECM
Trigger: CATGCACTCGCACCCGCATCAGCACCAGACACTGCC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCAAAACCTGTGCTTGGTTaGCGGTGTGCAGGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAKPVLG*RCAGAD
Trigger: ATCCGCCCCTGCACACCGGCAACCAAGCACAGGTTT...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCAGACGGCGGAAGATCCTaGCATTGTAGGGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGADGGRS*HCRVGQ
Trigger: CTGCCCAACCCTACAATGCCAGGATCTTCCGCCGTC...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGGTGAAACCTGTGCTTaGTTGCCGGTGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHGETCA*LPVCRG
Trigger: GCCCCTGCACACCGGCAACCAAGCACAGGTTTCACC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ACAGTAGAATGGCTTGTTTCAAGGAGGCACGACTGTGGTTCAGGGACTATCTGCTGTGGCGTCTGGTCCTaGCGGGAGCCCATCATCTCC +
Preference number: 4 (lower is better)
Translates to: TVEWLVSRRHDCGSGTICCGVWS*REPIIS
Trigger: GGAGATGATGGGCTCCCGGCAGGACCAGACGCCACA...GCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAACAAGCCATTCTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGCTTGGTTGCCGGTGTaGAGGGGCGGATGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAAWLPV*RGGCGE
Trigger: CTCGCCACATCCGCCCCTGCACACCGGCAACCAAGC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGGACAGGCCCGATCTaGCGGTTGGTGGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDGTGPI*RLVEGA
Trigger: GGCACCTTCCACCAACCGCCAGATCGGGCCTGTCCC...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGACGGCGGAAGATCCTaGCATTGTAGGGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHDGGRS*HCRVGQ
Trigger: CTGCCCAACCCTACAATGCCAGGATCTTCCGCCGTC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGTGCATGTGATGGTGTaGCGTCTGGTCCTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARVHVMV*RLVLPG
Trigger: TCCCGGCAGGACCAGACGCCACACCATCACATGCAC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGTGAGGATGGTGTGCTaGGTGCTGGTGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARVRMVC*VLVLVW
Trigger: CCACACCAGCACCAGCACCCAGCACACCATCCTCAC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCGTGCAGGGGCGGATGTaGCGAGGTCTGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCVQGRM*RGLVMC
Trigger: GCACATCACCAGACCTCGCCACATCCGCCCCTGCAC...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGGTGAAACCTGTGCTTaGTTGCCGGTGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARGETCA*LPVCRG
Trigger: GCCCCTGCACACCGGCAACCAAGCACAGGTTTCACC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
3UTR CAA 72 bp TCCCAGCTACTCAGGAGGCGGAGGTGGAAGGATAGCTaGAACTCGGAGGATGCTGCTGCAGTGATCCATGAT +
Preference number: 4 (lower is better)
Translates to: SQLLRRRRWKDS*NSEDAAAVIHD
Trigger: ATCATGGATCACTGCAGCAGCATCCTCCGAGTTCAAGCTATCCTTCCACCTCCGCCTCCTGAGTAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCATGACAGAGCTGGACTaGGGCGACGGCATGGCTTGC +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCMTELD*GDGMAC
Trigger: GCAAGCCATGCCGTCGCCTCAGTCCAGCTCTGTCAT...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATTTGGTGGAAGGTGCCTaGGTGATGACAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHLVEGA*VMTELD
Trigger: GTCCAGCTCTGTCATCACTCAGGCACCTTCCACCAA...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATATGGCAGCAGGGTGGTaGGTCAATGCAGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHMAAGW*VNAAFN
Trigger: GTTGAAGGCTGCATTGACTCACCACCCTGCTGCCAT...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp TGCTGGATGACTTGTTGCTGGGAGCAAGCTGGGACAGGACTAGCAGGAGGGCTACACCTCGCTGACCGATaGGGAAGTAGTGATGGTATT +
Preference number: 4 (lower is better)
Translates to: CWMTCCWEQAGTGLAGGLHLADR*GSSDGI
Trigger: AATACCATCACTACTTCCTCATCGGTCAGCGAGGTG...TAGCCCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR GCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTGTGGCGTCTGGTCCTaGCGGGAGCCCATCATCTCC +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEACGVWS*REPIIS
Trigger: GGAGATGATGGGCTCCCGGCAGGACCAGACGCCACA...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCGAGGTCTGGTGATGTaGTGGGTGTGCATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHRGLVM*WVCMKV
Trigger: CACCTTCATGCACACCCAGCACATCACCAGACCTCG...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGCTGGATGACTTGTTaGTGGGAGCAAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGACWMTC*WEQAGT
Trigger: TGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCA...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCAACTGAGGCGACGGCATaGCTTGCTGAATCACAACGT +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGATEATA*LAESQR
Trigger: ACGTTGTGATTCAGCAAGCCATGCCGTCGCCTCAGT...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCGTGCATGTGATGGTGTaGCGTCTGGTCCTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCVHVMV*RLVLPG
Trigger: TCCCGGCAGGACCAGACGCCACACCATCACATGCAC...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGTGCAGGGGCGGATGTaGCGAGGTCTGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAVQGRM*RGLVMC
Trigger: GCACATCACCAGACCTCGCCACATCCGCCCCTGCAC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGGATGACTTGTTGCTaGGAGCAAGCTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAWMTCC*EQAGTG
Trigger: TCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCA...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATGCGCTGCTAAGCTGGTaGGTTCCGGGCCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDALLSW*VPGPVM
Trigger: CATGACGGGGCCCGGAACTCACCAGCTTAGCAGCGC...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCATGACAGAGCTGGACTaGGGCGACGGCATGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAMTELD*GDGMAC
Trigger: GCAAGCCATGCCGTCGCCTCAGTCCAGCTCTGTCAT...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGACCTTGCATCCCCATaGTGCTGGAGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHDLASP*CWSSLT
Trigger: TGTCAGTGAACTCCAGCATCATGGGGATGCAAGGTC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATAAGCACAGGGGTTGCTaGGATTTGGACCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHKHRGC*DLDLAS
Trigger: GGATGCAAGGTCCAAATCTCAGCAACCCCTGTGCTT...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCTGTTGTGTTGCTGGTaGAACCTGTGCTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHLLCCW*NLCLVA
Trigger: GGCAACCAAGCACAGGTTTCACCAGCAACACAACAG...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp TTGCTGGGAGCAAGCTGGGACAGGACTAGCAGGAGGGCTACTCTCTGGACATGTTGGTATTATGCTGGATaGCTTGTTGCTGGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LLGASWDRTSRRATLWTCWYYAG*LVAGSK
Trigger: CTTGCTCCCAGCAACAAGTCATCCAGCATAATACCA...ACATGTCCAGAGAGTAGCCCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR TCA 90 bp GGCCGTATAAAACCAGTCGCAATCCAAGGGTGTCATGTTATAGCCCCACATCAAGTGACTTGCATCCGTTaGTGTGGCCGCAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GRIKPVAIQGCHVIAPHQVTCIR*CGRRRG
Trigger: CCCTCTCCTGCGGCCACATCAACGGATGCAAGTCAC...TTGATGTGGGGCTATAACATGACACCCTTGGATTGCGACTGGTTTTATACGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATTGCTGGATGACTTGTTaGTGGGAGCAAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHCWMTC*WEQAGT
Trigger: TGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCA...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCAGTACCTCCTAGACTCTaGTACCTCCCTCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAVPPRL*YLPRSL
Trigger: TAGAGAACGAGGGAGGTACCAGAGTCTAGGAGGTAC...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCACAACGTTGGTGTCATaGTTGGGCAGCCGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCTTLVS*LGSRAL
Trigger: CAGCGCTCGGCTGCCCAACCATGACACCAACGTTGT...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATGCAGGGTCCCAGGCATaGAGGCTGGCATGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDAGSQA*RLAWAV
Trigger: GACAGCCCATGCCAGCCTCCATGCCTGGGACCCTGC...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGTGAGGATGGTGTGCTaGGTGCTGGTGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAVRMVC*VLVLVW
Trigger: CCACACCAGCACCAGCACCCAGCACACCATCCTCAC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGGTGAAACCTGTGCTTaGTTGCCGGTGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAGETCA*LPVCRG
Trigger: GCCCCTGCACACCGGCAACCAAGCACAGGTTTCACC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCAGGTGGCTGTATTGTCTaGGTTGGCTGCATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAGGCIV*VGCICC
Trigger: ACAACAGATGCAGCCAACCCAGACAATACAGCCACC...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATCCCTGTGGGCTGGGGTaGCTGTATTGTCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDPCGLG*LYCLGW
Trigger: CCAACCCAGACAATACAGCCACCCCAGCCCACAGGG...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGCAGATGGTCCTCTGTTaGGAAGCGCCCTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARQMVLC*EAPFCL
Trigger: GAGACAGAAGGGCGCTTCCCAACAGAGGACCATCTG...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409603.5
CDS-3UTR TCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGACGGCATGGCTTGCTaGATCACAACGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARDGMAC*ITTLVS
Trigger: TGACACCAACGTTGTGATTCAGCAAGCCATGCCGTC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGCTGTTGTGTTGCTGGTaGAACCTGTGCTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARLLCCW*NLCLVA
Trigger: GGCAACCAAGCACAGGTTTCACCAGCAACACAACAG...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGGTATTATGCTGGATaGCTTGTTGCTGGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAWYYAG*LVAGSK
Trigger: CTTGCTCCCAGCAACAAGTCATCCAGCATAATACCA...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCACCTCGCTGACCGATaGGGAAGTAGTGATGGTATT +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHHLADR*GSSDGI
Trigger: AATACCATCACTACTTCCTCATCGGTCAGCGAGGTG...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp TTGCTGGGAGCAAGCTGGGACAGGACTAGCAGGAGGGCTACTCTCTGGACATGTCTTGGAGGCCAGGTCTaGTGGTGCATTTTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLGASWDRTSRRATLWTCLGGQV*WCILKN
Trigger: ATTCTTTAAAATGCACCATCAGACCTGGCCTCCAAG...ACATGTCCAGAGAGTAGCCCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR GCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCTGAGATTTGGACCTTaGATCCCCATGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHLRFGP*IPMMLE
Trigger: CTCCAGCATCATGGGGATGCAAGGTCCAAATCTCAG...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATTGTGGCGTCTGGTCCTaGCGGGAGCCCATCATCTCC +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADCGVWS*REPIIS
Trigger: GGAGATGATGGGCTCCCGGCAGGACCAGACGCCACA...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATGCAGCGGGTGGCAGCTaGCCGGTTCCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADAAGGS*PVPFQK
Trigger: TTTCTGGAACGGAACCGGGCAGCTGCCACCCGCTGC...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATGCAGCGGGTGGCAGCTaGCCGGTTCCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDAAGGS*PVPFQK
Trigger: TTTCTGGAACGGAACCGGGCAGCTGCCACCCGCTGC...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCAGCGGGTGGCAGCTaGCCGGTTCCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEAAGGS*PVPFQK
Trigger: TTTCTGGAACGGAACCGGGCAGCTGCCACCCGCTGC...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATTCTGTTGGGAAGCGCTaGGAGCAGCCTGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADSVGKR*EQPGAL
Trigger: CAGTGCCCCAGGCTGCTCCCAGCGCTTCCCAACAGA...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357727.7
ENST00000396300.6
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCACAACGTTGGTGTCATaGTTGGGCAGCCGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEATTLVS*LGSRAL
Trigger: CAGCGCTCGGCTGCCCAACCATGACACCAACGTTGT...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGACGGCGGAAGATCCTaGCATTGTAGGGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDDGGRS*HCRVGQ
Trigger: CTGCCCAACCCTACAATGCCAGGATCTTCCGCCGTC...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGGGGTTGCTGAGATTTaGACCTTGCATCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHGVAEI*TLHPHD
Trigger: ATCATGGGGATGCAAGGTCCAAATCTCAGCAACCCC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATTTGCTGGGAGCAAGCTaGGACAGGACTAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDLLGAS*DRTSRR
Trigger: CCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAA...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGCTTCCTGAGCCTTCCTaGACTCGTGCTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLELPEPS*TRAPGS
Trigger: GCTCCCTGGAGCACGAGTTCAGGAAGGCTCAGGAAG...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCGACGGCATGGCTTGCTaGATCACAACGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCDGMAC*ITTLVS
Trigger: TGACACCAACGTTGTGATTCAGCAAGCCATGCCGTC...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp GGCCGTATAAAACCAGTCGCAATCCAAGGGTGTCATGTTATAGCCCCACATCAAATGGCAGCAGGGTGGTaGGTCAATGCAGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: GRIKPVAIQGCHVIAPHQMAAGW*VNAAFN
Trigger: GTTGAAGGCTGCATTGACTCACCACCCTGCTGCCAT...TTGATGTGGGGCTATAACATGACACCCTTGGATTGCGACTGGTTTTATACGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGGTGCGAGTGCATGTaGTGGTGTGGCGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGGCECM*WCGVWS
Trigger: GGACCAGACGCCACACCATCACATGCACTCGCACCC...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGAACACATGGATGGGTaGCCCAGTAACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDEHMDG*PSNWLR
Trigger: CCTCAGCCAGTTACTGGGTCACCCATCCATGTGTTC...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCATCACCTAGGCTGATGTaGGACACAGGTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSSPRLM*DTGLSC
Trigger: ACAGCTGAGACCTGTGTCTCACATCAGCCTAGGTGA...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTTCCTGAACTCGTaGTCCAGGGAGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEAFLNS*SREQSS
Trigger: GCTGGACTGCTCCCTGGAGCACGAGTTCAGGAAGGC...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCACATGGCCCCACCAACTaGATTATGCATCGAGATATT +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAHGPTN*IMHRDI
Trigger: AATATCTCGATGCATAATGCAGTTGGTGGGGCCATG...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp TTGCTGGGAGCAAGCTGGGACAGGACTAGCAGGAGGGCTACTCTCTGGACATGTGTAGTGATGGTATTATaGTGGATGACTTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGASWDRTSRRATLWTCVVMVL*WMTCCW
Trigger: CCAGCAACAAGTCATCCAGCATAATACCATCACTAC...ACATGTCCAGAGAGTAGCCCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGCAGATGGTCCTCTGTTaGGAAGCGCTGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEQMVLC*EALGAA
Trigger: GGCTGCTCCCAGCGCTTCCCAACAGAGGACCATCTG...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357727.7
ENST00000396300.6
CDS-3UTR CCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCACTGAGGCGACGGCATaGCTTGCTGAATCACAACGT +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCTEATA*LAESQR
Trigger: ACGTTGTGATTCAGCAAGCCATGCCGTCGCCTCAGT...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTGCAGGGTCCCAGGCATaGAGGCTGGCATGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGAGSQA*RLAWAV
Trigger: GACAGCCCATGCCAGCCTCCATGCCTGGGACCCTGC...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATGTGCATGTGATGGTGTaGCGTCTGGTCCTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADVHVMV*RLVLPG
Trigger: TCCCGGCAGGACCAGACGCCACACCATCACATGCAC...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGTGAGGATGGTGTGCTaGGTGCTGGTGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEVRMVC*VLVLVW
Trigger: CCACACCAGCACCAGCACCCAGCACACCATCCTCAC...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCTGTATTGTCTGGGTTaGCTGCATCTGTTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHLYCLG*LHLLCC
Trigger: GCAACACAACAGATGCAGCCAACCCAGACAATACAG...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGGTGGCTGTATTGTCTaGGTTGGCTGCATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARGGCIV*VGCICC
Trigger: ACAACAGATGCAGCCAACCCAGACAATACAGCCACC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCACTGGTACCAGAAAACTaGAGAAAAGCACCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGALVPEN*RKAPKR
Trigger: ACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAG...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp ACAGTAGAATGGCTTGTTTCAAGGAGGCACGACTGTGGTTCAGGGACTATCTGCCTGGGCATTAGCAAGTaGACCAAGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: TVEWLVSRRHDCGSGTICLGISK*TKRRRG
Trigger: ACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAG...GCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAACAAGCCATTCTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCACTCTACCTCTCCTaGCTTCGTGGATTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGASLYLS*LRGLRN
Trigger: ATTTCTCAATCCACGAAGCCAGGAGAGGTAGAGTGA...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGACTTCCTGAGCCTTCCTaGACTCGTGCTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGLPEPS*TRAPGS
Trigger: GCTCCCTGGAGCACGAGTTCAGGAAGGCTCAGGAAG...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGCTGCTCTCCTCTTCCTaGGCCTTCCTGAACTCGTGC +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLELLSSS*AFLNSC
Trigger: GCACGAGTTCAGGAAGGCTCAGGAAGAGGAGAGCAG...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGACGGCATGGCTTGCTaGATCACAACGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDDGMAC*ITTLVS
Trigger: TGACACCAACGTTGTGATTCAGCAAGCCATGCCGTC...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAATGACAGAGCTGGACTaGGGCGACGGCATGGCTTGC +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGMTELD*GDGMAC
Trigger: GCAAGCCATGCCGTCGCCTCAGTCCAGCTCTGTCAT...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGACCTTGCATCCCCATaGTGCTGGAGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDDLASP*CWSSLT
Trigger: TGTCAGTGAACTCCAGCATCATGGGGATGCAAGGTC...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAAGCACAGGGGTTGCTaGGATTTGGACCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAKHRGC*DLDLAS
Trigger: GGATGCAAGGTCCAAATCTCAGCAACCCCTGTGCTT...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCACCTCATTTTGGCTTCTaGATGCATTGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSPHFGF*MHWLDL
Trigger: CAGGTCCAGCCAATGCATTCAGAAGCCAAAATGAGG...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCCCTCATTTTGGCTTCTaGATGCATTGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCPHFGF*MHWLDL
Trigger: CAGGTCCAGCCAATGCATTCAGAAGCCAAAATGAGG...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTGGTATTATGCTGGATaGCTTGTTGCTGGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARWYYAG*LVAGSK
Trigger: CTTGCTCCCAGCAACAAGTCATCCAGCATAATACCA...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATAAAGCAAGAGTTGAATaGACTCCAGCTGTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHKARVE*TPAVGE
Trigger: TTCACCCACAGCTGGAGTTCATTCAACTCTTGCTTT...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGTGAAAAGCAAGAGTTaGATGAACTCCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARVKSKS*MNSSCG
Trigger: CCCACAGCTGGAGTTCATTCAACTCTTGCTTTTCAC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp ACACACACACACATTAAGAGGTCAAGCATTCAAATGGAGATGAAACACCAGCACGCCTTCCTGAACTCGTaGTCCAGGGAGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: THTHIKRSSIQMEMKHQHAFLNS*SREQSS
Trigger: GCTGGACTGCTCCCTGGAGCACGAGTTCAGGAAGGC...GTGCTGGTGTTTCATCTCCATTTGAATGCTTGACCTCTTAATGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCAAGATATTCCGCTTGCTaGTCTCCTCTTCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSRYSAC*SPLPEP
Trigger: AGGCTCAGGAAGAGGAGAGCAGCAAGCGGAATATCT...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCTCGAGATATTCCGCTTaGTGCTCTCCTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCSRYSA*CSPLPE
Trigger: CTCAGGAAGAGGAGAGCAGCAAGCGGAATATCTCGA...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCATGGCCCCACCAACTaGATTATGCATCGAGATATT +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHHGPTN*IMHRDI
Trigger: AATATCTCGATGCATAATGCAGTTGGTGGGGCCATG...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGATTTTGGCTTCTGAATaGATTGGCTGGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARILASE*IGWTWG
Trigger: TCCCCAGGTCCAGCCAATGCATTCAGAAGCCAAAAT...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATAGCTTGGTTGCCGGTGTaGAGGGGCGGATGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLIAWLPV*RGGCGE
Trigger: CTCGCCACATCCGCCCCTGCACACCGGCAACCAAGC...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATGCTTGGTTGCCGGTGTaGAGGGGCGGATGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINAWLPV*RGGCGE
Trigger: CTCGCCACATCCGCCCCTGCACACCGGCAACCAAGC...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGCTTGGTTGCCGGTGTaGAGGGGCGGATGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCAWLPV*RGGCGE
Trigger: CTCGCCACATCCGCCCCTGCACACCGGCAACCAAGC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTGCTGGATGACTTGTTaGTGGGAGCAAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEACWMTC*WEQAGT
Trigger: TGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCA...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGTTCCGGGCCCCGTCATaGCCCCACCAACTGCATTAT +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEFRAPS*PHQLHY
Trigger: ATAATGCAGTTGGTGGGGCCATGACGGGGCCCGGAA...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATACAACGTTGGTGTCATaGTTGGGCAGCCGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADTTLVS*LGSRAL
Trigger: CAGCGCTCGGCTGCCCAACCATGACACCAACGTTGT...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGCTGAATCACAACGTTaGTGTCATGGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAAESQR*CHGWAA
Trigger: GGCTGCCCAACCATGACACCAACGTTGTGATTCAGC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCACTGAGGCGACGGCATaGCTTGCTGAATCACAACGT +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEATEATA*LAESQR
Trigger: ACGTTGTGATTCAGCAAGCCATGCCGTCGCCTCAGT...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATGGGACAGGCCCGATCTaGCGGTTGGTGGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINGTGPI*RLVEGA
Trigger: GGCACCTTCCACCAACCGCCAGATCGGGCCTGTCCC...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGTTGCTGGGAGCAAGCTaGGACAGGACTAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLELLGAS*DRTSRR
Trigger: CCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAA...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATTGGATGACTTGTTGCTaGGAGCAAGCTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDWMTCC*EQAGTG
Trigger: TCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCA...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGTGATGGTATTATGCTaGATGACTTGTTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHVMVLC*MTCCWE
Trigger: CTCCCAGCAACAAGTCATCCAGCATAATACCATCAC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp CTGAGGGTGGAGCTTCCTACCACCTCGCTGACCGATGAGGAAGTAGTGATGGTAAAAAGAAAGGACGCATaGTACGCTACAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LRVELPTTSLTDEEVVMVKRKDA*YATALL
Trigger: AAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTT...TACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAAGCTCCACCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR CCA 90 bp GGCCGTATAAAACCAGTCGCAATCCAAGGGTGTCATGTTATAGCCCCACATCAACCTGCACCTCATCCATaGGGTTCCTTCAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: GRIKPVAIQGCHVIAPHQPAPHP*GSFSSQ
Trigger: TTGACTGCTGAAGGAACCCCATGGATGAGGTGCAGG...TTGATGTGGGGCTATAACATGACACCCTTGGATTGCGACTGGTTTTATACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATCTGGGACAGGCCTCATaGACATCACTGAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDLGQAS*TSLRLN
Trigger: ATTCAGCCTCAGTGATGTCCATGAGGCCTGTCCCAG...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396298.6
CDS-3UTR TCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTCTTCCTGAGCCTTCCTaGACTCGTGCTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGLPEPS*TRAPGS
Trigger: GCTCCCTGGAGCACGAGTTCAGGAAGGCTCAGGAAG...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGGGTGCGAGTGCATGTaGTGGTGTGGCGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCGCECM*WCGVWS
Trigger: GGACCAGACGCCACACCATCACATGCACTCGCACCC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGGGCAGTGTCTGGTGCTaGTGCGGGTGCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLGSVWC*CGCECM
Trigger: CATGCACTCGCACCCGCATCAGCACCAGACACTGCC...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGGGCAGTGTCTGGTGCTaGTGCGGGTGCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMGSVWC*CGCECM
Trigger: CATGCACTCGCACCCGCATCAGCACCAGACACTGCC...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATGGCAGTGTCTGGTGCTaGTGCGGGTGCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINGSVWC*CGCECM
Trigger: CATGCACTCGCACCCGCATCAGCACCAGACACTGCC...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTGCTTTCTTTTCCAATaGCATCACCCAGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARCFLFQ*HHPDLP
Trigger: AGGAAGGTCTGGGTGATGTCATTGGAAAAGAAAGCA...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGCATGTTTGTCTGGGTaGGTTCTTCTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHACLSG*VLLLSF
Trigger: AAAAGAAAGCAGAAGAACTCACCCAGACAAACATGC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATATAGACACTTCATTCTaGAGCTGCATGTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHIDTSF*SCMFVW
Trigger: CCAGACAAACATGCAGCTTCAGAATGAAGTGTCTAT...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTGCCTTCCTGAACTCGTaGTCCAGGGAGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGAFLNS*SREQSS
Trigger: GCTGGACTGCTCCCTGGAGCACGAGTTCAGGAAGGC...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTCGAGATATTCCGCTTaGTGCTCTCCTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEASRYSA*CSPLPE
Trigger: CTCAGGAAGAGGAGAGCAGCAAGCGGAATATCTCGA...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCGGTTGGTGGAAGGTaGCTGAGTGATGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEAVGGR*LSDDRA
Trigger: AGCTCTGTCATCACTCAGGCACCTTCCACCAACCGC...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATATGTGGCGTCTGGTCCTaGCGGGAGCCCATCATCTCC +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLICGVWS*REPIIS
Trigger: GGAGATGATGGGCTCCCGGCAGGACCAGACGCCACA...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATCGAGGTCTGGTGATGTaGTGGGTGTGCATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDRGLVM*WVCMKV
Trigger: CACCTTCATGCACACCCAGCACATCACCAGACCTCG...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAAAACCTGTGCTTGGTTaGCGGTGTGCAGGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGKPVLG*RCAGAD
Trigger: ATCCGCCCCTGCACACCGGCAACCAAGCACAGGTTT...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGTCTGTTGGGAAGCGCTaGGAGCAGCCTGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLSVGKR*EQPGAL
Trigger: CAGTGCCCCAGGCTGCTCCCAGCGCTTCCCAACAGA...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357727.7
ENST00000396300.6
CDS-3UTR CCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGGGACAGGCCCGATCTaGCGGTTGGTGGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEGTGPI*RLVEGA
Trigger: GGCACCTTCCACCAACCGCCAGATCGGGCCTGTCCC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTGGGACAGGCCCGATCTaGCGGTTGGTGGAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFGTGPI*RLVEGA
Trigger: GGCACCTTCCACCAACCGCCAGATCGGGCCTGTCCC...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTGCAGGGTCCCAGGCATaGAGGCTGGCATGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVAGSQA*RLAWAV
Trigger: GACAGCCCATGCCAGCCTCCATGCCTGGGACCCTGC...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCCATTTGTCGCTCCATTaGCATCAAGACGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAHLSLH*HQDGGR
Trigger: TCTTCCGCCGTCTTGATGCCAATGGAGCGACAAATG...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGGGGTTGCTGAGATTTaGACCTTGCATCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAGVAEI*TLHPHD
Trigger: ATCATGGGGATGCAAGGTCCAAATCTCAGCAACCCC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATTGTTCCCATTTGACATaGCAGCAGGGTGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDCSHLT*QQGGES
Trigger: TGACTCACCACCCTGCTGCCATGTCAAATGGGAACA...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTGTTCCCATTTGACATaGCAGCAGGGTGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEACSHLT*QQGGES
Trigger: TGACTCACCACCCTGCTGCCATGTCAAATGGGAACA...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGTGCAGGGGCGGATGTaGCGAGGTCTGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCVQGRM*RGLVMC
Trigger: GCACATCACCAGACCTCGCCACATCCGCCCCTGCAC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCTCTGTCTGCAGCGGGTaGCAGCTGCCCGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCSVCSG*QLPGSV
Trigger: AACGGAACCGGGCAGCTGCCACCCGCTGCAGACAGA...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGTGATGGTATTATGCTaGATGACTTGTTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARVMVLC*MTCCWE
Trigger: CTCCCAGCAACAAGTCATCCAGCATAATACCATCAC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGCGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLERYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATCGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDRYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGCTGGTACCAGAAAACTaGAGAAAAGCACCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARLVPEN*RKAPKR
Trigger: ACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAG...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp AGGGTGGAGCTTCCTACCACCTCGCTGACCGATGAGGAAGTAGTGATGGTATTACTGGTACCAGAAAACTaGAGAAAAGCACCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: RVELPTTSLTDEEVVMVLLVPEN*RKAPKR
Trigger: ACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAG...TAATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAAGCTCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR CCA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATTTCAGGCAAAGGGTTaGACTGATAAGAATGAAACC +
Preference number: 4 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAFQAKG*TDKNET
Trigger: GGTTTCATTCTTATCAGTCCAACCCTTTGCCTGAAA...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATGGCTTTCTAGGAAATTaGGGTGGGGTGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADGFLGN*GGVERG
Trigger: GCCTCTCTCCACCCCACCCCAATTTCCTAGAAAGCC...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGAAGCACAGGGGTTGCTaGGATTTGGACCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEKHRGC*DLDLAS
Trigger: GGATGCAAGGTCCAAATCTCAGCAACCCCTGTGCTT...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATGTTCATGTTCCCATTTaGCATGGCAGCAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDVHVPI*HGSRVV
Trigger: CACCACCCTGCTGCCATGTCAAATGGGAACATGAAC...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTGGGTGCGAGTGCATGTaGTGGTGTGGCGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFGCECM*WCGVWS
Trigger: GGACCAGACGCCACACCATCACATGCACTCGCACCC...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTGGCAGTGTCTGGTGCTaGTGCGGGTGCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFGSVWC*CGCECM
Trigger: CATGCACTCGCACCCGCATCAGCACCAGACACTGCC...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATCTGTTGTGTTGCTGGTaGAACCTGTGCTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADLLCCW*NLCLVA
Trigger: GGCAACCAAGCACAGGTTTCACCAGCAACACAACAG...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCCTTGGAGGCCAGGTCTaGTGGTGCATTTTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCLGGQV*WCILKN
Trigger: ATTCTTTAAAATGCACCATCAGACCTGGCCTCCAAG...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp AGTAGTGATGGTATTATGCTGGATGACTTGTTGCTGGGAGCAAGCTGGGACAGGATGAAAGCCAGTCTTTaGAGAACTGAGGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSDGIMLDDLLLGASWDRMKASL*RTEESS
Trigger: GGAAGACTCCTCAGTTCTTCAAAGACTGGCTTTCAT...CCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR TCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTTTCCATACCGTGAATaGACACACCTAAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAFPYRE*THLKAL
Trigger: CAGGGCCTTTAGGTGTGTTCATTCACGGTATGGAAA...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGGCTTCACCTAGGCTaGTGTGAGACACAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADRLHLG*CETQVS
Trigger: TGAGACCTGTGTCTCACATCAGCCTAGGTGAAGCCT...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCAGCAGCCTGGGGCACTaGAGACAAACGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCSSLGH*RQTASP
Trigger: AGGAGAGGCCGTTTGTCTGCAGTGCCCCAGGCTGCT...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357727.7
ENST00000396300.6
CDS-3UTR GCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGCGGTTGGTGGAAGGTaGCTGAGTGATGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGAVGGR*LSDDRA
Trigger: AGCTCTGTCATCACTCAGGCACCTTCCACCAACCGC...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTTGTGGCGTCTGGTCCTaGCGGGAGCCCATCATCTCC +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFCGVWS*REPIIS
Trigger: GGAGATGATGGGCTCCCGGCAGGACCAGACGCCACA...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTAAACCTGTGCTTGGTTaGCGGTGTGCAGGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGKPVLG*RCAGAD
Trigger: ATCCGCCCCTGCACACCGGCAACCAAGCACAGGTTT...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTGCAGCGGGTGGCAGCTaGCCGGTTCCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKIAAGGS*PVPFQK
Trigger: TTTCTGGAACGGAACCGGGCAGCTGCCACCCGCTGC...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTGCAGCGGGTGGCAGCTaGCCGGTTCCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVAAGGS*PVPFQK
Trigger: TTTCTGGAACGGAACCGGGCAGCTGCCACCCGCTGC...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATTGCTGGATGACTTGTTaGTGGGAGCAAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADCWMTC*WEQAGT
Trigger: TGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCA...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGTATTTTCTACTGGCTaGTGGTTGGGAAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAVFSTG*WLGRVL
Trigger: AAGGACCCTTCCCAACCAGCAGCCAGTAGAAAATAC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCTGAATCACAACGTTaGTGTCATGGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEAESQR*CHGWAA
Trigger: GGCTGCCCAACCATGACACCAACGTTGTGATTCAGC...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTGTCTCTGTCTGTTGTaGAGATGTAGCAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARCLCLL*RCSRED
Trigger: ATCTTCTCTGCTACATCTCCACAACAGACAGAGACA...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTGACGGCGGAAGATCCTaGCATTGTAGGGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGDGGRS*HCRVGQ
Trigger: CTGCCCAACCCTACAATGCCAGGATCTTCCGCCGTC...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATGTGCATGTGATGGTGTaGCGTCTGGTCCTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINVHVMV*RLVLPG
Trigger: TCCCGGCAGGACCAGACGCCACACCATCACATGCAC...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGGTGAGGATGGTGTGCTaGGTGCTGGTGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLVRMVC*VLVLVW
Trigger: CCACACCAGCACCAGCACCCAGCACACCATCCTCAC...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATCTGTATTGTCTGGGTTaGCTGCATCTGTTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDLYCLG*LHLLCC
Trigger: GCAACACAACAGATGCAGCCAACCCAGACAATACAG...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATCCCTGTGGGCTGGGGTaGCTGTATTGTCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINPCGLG*LYCLGW
Trigger: CCAACCCAGACAATACAGCCACCCCAGCCCACAGGG...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTTCTGTCTGCAGCGGGTaGCAGCTGCCCGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVSVCSG*QLPGSV
Trigger: AACGGAACCGGGCAGCTGCCACCCGCTGCAGACAGA...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTTCTGTCTGCAGCGGGTaGCAGCTGCCCGGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFSVCSG*QLPGSV
Trigger: AACGGAACCGGGCAGCTGCCACCCGCTGCAGACAGA...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTTGCTGGGAGCAAGCTaGGACAGGACTAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGLLGAS*DRTSRR
Trigger: CCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAA...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGTGGATGACTTGTTGCTaGGAGCAAGCTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEWMTCC*EQAGTG
Trigger: TCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCA...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATTGGATGACTTGTTGCTaGGAGCAAGCTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADWMTCC*EQAGTG
Trigger: TCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCA...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGAAAAGAAAGGACGCATaGTACGCTACAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARKRKDA*YATALL
Trigger: AAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTT...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGCTGGGCATTAGCAAGTaGACCAAGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLELGISK*TKRRRG
Trigger: ACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAG...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp GGCCGTATAAAACCAGTCGCAATCCAAGGGTGTCATGTTATAGCCCCACATCAACCTCTCCTGGCTTCGTaGATTGAGAAATGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: GRIKPVAIQGCHVIAPHQPLLAS*IEKCVK
Trigger: CTTGACACATTTCTCAATCCACGAAGCCAGGAGAGG...TTGATGTGGGGCTATAACATGACACCCTTGGATTGCGACTGGTTTTATACGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGCCTCAGAGAGTCTATaGCTAGGACAACAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAASESL*LGQQSD
Trigger: ATCTGACTGTTGTCCTAGCCATAGACTCTCTGAGGC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTTTTCTACTGGCTGCTaGTTGGGAAGGGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAFSTGC*LGRVLS
Trigger: AGAAAGGACCCTTCCCAACCAGCAGCCAGTAGAAAA...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTCTGCTCTCCTCTTCCTaGGCCTTCCTGAACTCGTGC +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVLLSSS*AFLNSC
Trigger: GCACGAGTTCAGGAAGGCTCAGGAAGAGGAGAGCAG...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATCTGCTCTCCTCTTCCTaGGCCTTCCTGAACTCGTGC +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINLLSSS*AFLNSC
Trigger: GCACGAGTTCAGGAAGGCTCAGGAAGAGGAGAGCAG...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTGCTTTCTTTTCCAATaGCATCACCCAGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEACFLFQ*HHPDLP
Trigger: AGGAAGGTCTGGGTGATGTCATTGGAAAAGAAAGCA...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCAGCATGTTTGTCTGGGTaGGTTCTTCTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSACLSG*VLLLSF
Trigger: AAAAGAAAGCAGAAGAACTCACCCAGACAAACATGC...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATCTTGGAGGCCAGGTCTaGTGGTGCATTTTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDLGGQV*WCILKN
Trigger: ATTCTTTAAAATGCACCATCAGACCTGGCCTCCAAG...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATATGAAAGCCAGTCTTTaGAGAACTGAGGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDMKASL*RTEESS
Trigger: GGAAGACTCCTCAGTTCTTCAAAGACTGGCTTTCAT...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATAATAATTCAGAAGAGTaGAGTAGGCTGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDNNSEE*SRLGAV
Trigger: CACTGCACCCAGCCTACTTCACTCTTCTGAATTATT...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCATGTATTTCCATACCGTaGATGAACACACCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSCISIP*MNTPKG
Trigger: GCCTTTAGGTGTGTTCATTCACGGTATGGAAATACA...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGCCAAGTGTTGGATTTaGCCAATGTATCTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARAKCWI*PMYLSV
Trigger: AACAGAAAGATACATTGGTCAAATCCAACACTTGGC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGTGATGATTGATTCATaGACACATGGATGGGTGACC +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAVMIDS*THGWVT
Trigger: GGTCACCCATCCATGTGTTCATGAATCAATCATCAC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCATCAGGTGTACTTATCTaGGTTGTTAACTCCCATCAC +
Preference number: 4 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSSGVLI*VVNSHH
Trigger: GTGATGGGAGTTAACAACTCAGATAAGTACACCTGA...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGTCCAGAACTTAAAGTaGCAGCACCTTTTTGGGACT +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAVQNLK*QHLFGT
Trigger: AGTCCCAAAAAGGTGCTGTCACTTTAAGTTCTGGAC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGCCTTCCTGAACTCGTaGTCCAGGGAGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEAFLNS*SREQSS
Trigger: GCTGGACTGCTCCCTGGAGCACGAGTTCAGGAAGGC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATAGATATTCCGCTTGCTaGTCTCCTCTTCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDRYSAC*SPLPEP
Trigger: AGGCTCAGGAAGAGGAGAGCAGCAAGCGGAATATCT...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATTCGAGATATTCCGCTTaGTGCTCTCCTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDSRYSA*CSPLPE
Trigger: CTCAGGAAGAGGAGAGCAGCAAGCGGAATATCTCGA...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATCTGAGATTTGGACCTTaGATCCCCATGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDLRFGP*IPMMLE
Trigger: CTCCAGCATCATGGGGATGCAAGGTCCAAATCTCAG...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTAAACCTGTGCTTGGTTaGCGGTGTGCAGGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVKPVLG*RCAGAD
Trigger: ATCCGCCCCTGCACACCGGCAACCAAGCACAGGTTT...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp CGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATTTTAAAGAATCGGATCCTTGTGATTCTTTCTaGATGGCTGTTATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RYSSSWRPGLMVHFKESDPCDSF*MAVIGQ
Trigger: CTGCCCAATAACAGCCATGCAGAAAGAATCACAAGG...ATCCGATTCTTTAAAATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR GCA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCGTAGTGATGGTATTATaGTGGATGACTTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EENWALASGPRGGEVKRCVVMVL*WMTCCW
Trigger: CCAGCAACAAGTCATCCAGCATAATACCATCACTAC...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATAAAGAGATTCTAAATTaGTACTGTTCGCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHKEILN*YCSHRH
Trigger: GTGCCTATGCGAACAGTAGCAATTTAGAATCTCTTT...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGTTCCGGGCCCCGTCATaGCCCCACCAACTGCATTAT +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLFRAPS*PHQLHY
Trigger: ATAATGCAGTTGGTGGGGCCATGACGGGGCCCGGAA...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGTTCCGGGCCCCGTCATaGCCCCACCAACTGCATTAT +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMFRAPS*PHQLHY
Trigger: ATAATGCAGTTGGTGGGGCCATGACGGGGCCCGGAA...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGACAACGTTGGTGTCATaGTTGGGCAGCCGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLTTLVS*LGSRAL
Trigger: CAGCGCTCGGCTGCCCAACCATGACACCAACGTTGT...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGACGGCGGAAGATCCTaGCATTGTAGGGTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCDGGRS*HCRVGQ
Trigger: CTGCCCAACCCTACAATGCCAGGATCTTCCGCCGTC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGCATTTGTCGCTCCATTaGCATCAAGACGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEHLSLH*HQDGGR
Trigger: TCTTCCGCCGTCTTGATGCCAATGGAGCGACAAATG...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATCATTTGTCGCTCCATTaGCATCAAGACGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDHLSLH*HQDGGR
Trigger: TCTTCCGCCGTCTTGATGCCAATGGAGCGACAAATG...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCCCATCATGTGTCCCATaGTGTTCATGTTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAPSCVP*CSCSHL
Trigger: CAAATGGGAACATGAACACCATGGGACACATGATGG...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTGTGCATGTGATGGTGTaGCGTCTGGTCCTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVVHVMV*RLVLPG
Trigger: TCCCGGCAGGACCAGACGCCACACCATCACATGCAC...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGTGAGGATGGTGTGCTaGGTGCTGGTGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEVRMVC*VLVLVW
Trigger: CCACACCAGCACCAGCACCCAGCACACCATCCTCAC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTCCCTGTGGGCTGGGGTaGCTGTATTGTCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVPCGLG*LYCLGW
Trigger: CCAACCCAGACAATACAGCCACCCCAGCCCACAGGG...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTTGCTGGGAGCAAGCTaGGACAGGACTAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINLLGAS*DRTSRR
Trigger: CCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAA...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCAAAAAGAAAGGACGCATaGTACGCTACAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSKRKDA*YATALL
Trigger: AAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTT...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp GGCCGTATAAAACCAGTCGCAATCCAAGGGTGTCATGTTATAGCCCCACATCAACTGGTACCAGAAAACTaGAGAAAAGCACCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: GRIKPVAIQGCHVIAPHQLVPEN*RKAPKR
Trigger: ACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAG...TTGATGTGGGGCTATAACATGACACCCTTGGATTGCGACTGGTTTTATACGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTTTCAGGCAAAGGGTTaGACTGATAAGAATGAAACC +
Preference number: 4 (lower is better)
Translates to: MPLKERTHGTLQLFLEARFQAKG*TDKNET
Trigger: GGTTTCATTCTTATCAGTCCAACCCTTTGCCTGAAA...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGACTGGGCATTAGCAAGTaGACCAAGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGLGISK*TKRRRG
Trigger: ACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAG...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGAAGGAGGCACGACTGTaGTTCAGGGACTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEKEARL*FRDYLL
Trigger: AAGCAGATAGTCCCTGAACCACAGTCGTGCCTCCTT...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTTTGCATCCGTTGATGTaGCCGCAGGAGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVLHPLM*PQERAE
Trigger: CTCAGCCCTCTCCTGCGGCCACATCAACGGATGCAA...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATTCATGTTTGTGCCTATaGATCATCAGATGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDSCLCL*IIRWSS
Trigger: AGAGGACCATCTGATGATTCATAGGCACAAACATGA...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTCTGCTCTCCTCTTCCTaGGCCTTCCTGAACTCGTGC +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKILLSSS*AFLNSC
Trigger: GCACGAGTTCAGGAAGGCTCAGGAAGAGGAGAGCAG...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATATTGGTGGAAGGTGCCTaGGTGATGACAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLILVEGA*VMTELD
Trigger: GTCCAGCTCTGTCATCACTCAGGCACCTTCCACCAA...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTTTGGTGGAAGGTGCCTaGGTGATGACAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVLVEGA*VMTELD
Trigger: GTCCAGCTCTGTCATCACTCAGGCACCTTCCACCAA...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTATGGCAGCAGGGTGGTaGGTCAATGCAGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVMAAGW*VNAAFN
Trigger: GTTGAAGGCTGCATTGACTCACCACCCTGCTGCCAT...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATATGGCAGCAGGGTGGTaGGTCAATGCAGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINMAAGW*VNAAFN
Trigger: GTTGAAGGCTGCATTGACTCACCACCCTGCTGCCAT...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGACACCTCGCTGACCGATaGGGAAGTAGTGATGGTATT +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGHLADR*GSSDGI
Trigger: AATACCATCACTACTTCCTCATCGGTCAGCGAGGTG...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATCCTGGCTTCGTGGATTaGGAAATGTGTCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADPGFVD*EMCQGE
Trigger: TTCTCCTTGACACATTTCTCAATCCACGAAGCCAGG...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATCAACGTGTTGCTTCCTaGAGTCACCAAATCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDQRVAS*SHQIKF
Trigger: AAACTTGATTTGGTGACTGCAGGAAGCAACACGTTG...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTTTGGCTTCTGAATaGATTGGCTGGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDILASE*IGWTWG
Trigger: TCCCCAGGTCCAGCCAATGCATTCAGAAGCCAAAAT...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGATTTTGGCTTCTGAATaGATTGGCTGGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEILASE*IGWTWG
Trigger: TCCCCAGGTCCAGCCAATGCATTCAGAAGCCAAAAT...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATACGAGGTCTGGTGATGTaGTGGGTGTGCATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLIRGLVM*WVCMKV
Trigger: CACCTTCATGCACACCCAGCACATCACCAGACCTCG...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTCGAGGTCTGGTGATGTaGTGGGTGTGCATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVRGLVM*WVCMKV
Trigger: CACCTTCATGCACACCCAGCACATCACCAGACCTCG...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGATTGTCTGGGTTGGCTaGATCTGTTGTGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEIVWVG*ICCVAG
Trigger: ACCAGCAACACAACAGATGCAGCCAACCCAGACAAT...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGTAGTGATGGTATTATaGTGGATGACTTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAVVMVL*WMTCCW
Trigger: CCAGCAACAAGTCATCCAGCATAATACCATCACTAC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAAGCGATGATGTAATGTaGTGGCCCTTCTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGSDDVM*WPFFCA
Trigger: GGCGCAAAAGAAGGGCCAGCACATTACATCATCGCT...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396298.6
CDS-3UTR CCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATCTGTATTGTCTGGGTTaGCTGCATCTGTTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDLYCLG*LHLLCC
Trigger: GCAACACAACAGATGCAGCCAACCCAGACAATACAG...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CAGTCAAACTGTCAAGTTGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACTGCGGTGGCTGTATTGTCTaGGTTGGCTGCATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QSNCQVAERRKLRQVLNCGGCIV*VGCICC
Trigger: ACAACAGATGCAGCCAACCCAGACAATACAGCCACC...GCAGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTTGCTGGGAGCAAGCTaGGACAGGACTAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKILLGAS*DRTSRR
Trigger: CCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAA...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTTTGCTGGGAGCAAGCTaGGACAGGACTAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFLLGAS*DRTSRR
Trigger: CCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAA...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATCGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINRYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATAAAAGAAAGGACGCATaGTACGCTACAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDKRKDA*YATALL
Trigger: AAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTT...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATAGACCTTGCATCCCCATaGTGCTGGAGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLIDLASP*CWSSLT
Trigger: TGTCAGTGAACTCCAGCATCATGGGGATGCAAGGTC...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGACCTTGCATCCCCATaGTGCTGGAGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCDLASP*CWSSLT
Trigger: TGTCAGTGAACTCCAGCATCATGGGGATGCAAGGTC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTCCTCATTTTGGCTTCTaGATGCATTGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGPHFGF*MHWLDL
Trigger: CAGGTCCAGCCAATGCATTCAGAAGCCAAAATGAGG...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTATGGCAGCAGGGTGGTaGGTCAATGCAGCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKIMAAGW*VNAAFN
Trigger: GTTGAAGGCTGCATTGACTCACCACCCTGCTGCCAT...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTGTTCATGTTCCCATTTaGCATGGCAGCAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVVHVPI*HGSRVV
Trigger: CACCACCCTGCTGCCATGTCAAATGGGAACATGAAC...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGATGAAAGCCAGTCTTTaGAGAACTGAGGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEMKASL*RTEESS
Trigger: GGAAGACTCCTCAGTTCTTCAAAGACTGGCTTTCAT...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATTGGATCTGTCTTACTTaGCATCTAGGTATACCTCAT +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDWICLT*HLGIPH
Trigger: ATGAGGTATACCTAGATGTCAAGTAAGACAGATCCA...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTGGATCTGTCTTACTTaGCATCTAGGTATACCTCAT +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAWICLT*HLGIPH
Trigger: ATGAGGTATACCTAGATGTCAAGTAAGACAGATCCA...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGATTTTCAGGCAGATTaGTTATTCTGTTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDDFQAD*LFCCLV
Trigger: CACCAGACAACAGAATAATCAATCTGCCTGAAAATC...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp CCTTCTGAATTATTATGTAGTACATGGATTTTCAACGTTATAGGCAGGCCGTATGACCCAGTAACTGGCTaGGGGAGGAGAATGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PSELLCSTWIFNVIGRPYDPVTG*GRRMEY
Trigger: GTACTCCATTCTCCTCCCTCAGCCAGTTACTGGGTC...ATACGGCCTGCCTATAACGTTGAAAATCCATGTACTACATAATAATTCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGTTCCAGGCCAAGCGATaGTGTAATGTGCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLFQAKR*CNVLAL
Trigger: AAGGGCCAGCACATTACATCATCGCTTGGCCTGGAA...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396298.6
CDS-3UTR GCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGCGGTTGGTGGAAGGTaGCTGAGTGATGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEAVGGR*LSDDRA
Trigger: AGCTCTGTCATCACTCAGGCACCTTCCACCAACCGC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTCTGAGATTTGGACCTTaGATCCCCATGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGLRFGP*IPMMLE
Trigger: CTCCAGCATCATGGGGATGCAAGGTCCAAATCTCAG...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATAGGGTGGTGAGTCAATaGAGCCTTCAACCTCATTTT +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDRVVSQ*SLQPHF
Trigger: AAAATGAGGTTGAAGGCTGCATTGACTCACCACCCT...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAACGAGGTCTGGTGATGTaGTGGGTGTGCATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKERGLVM*WVCMKV
Trigger: CACCTTCATGCACACCCAGCACATCACCAGACCTCG...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAATTGTCTGGGTTGGCTaGATCTGTTGTGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGIVWVG*ICCVAG
Trigger: ACCAGCAACACAACAGATGCAGCCAACCCAGACAAT...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATCCTTGTGATTCTTTCTaGATGGCTGTTATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADPCDSF*MAVIGQ
Trigger: CTGCCCAATAACAGCCATGCAGAAAGAATCACAAGG...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATCCTTGTGATTCTTTCTaGATGGCTGTTATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDPCDSF*MAVIGQ
Trigger: CTGCCCAATAACAGCCATGCAGAAAGAATCACAAGG...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGCCTTGTGATTCTTTCTaGATGGCTGTTATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEPCDSF*MAVIGQ
Trigger: CTGCCCAATAACAGCCATGCAGAAAGAATCACAAGG...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTTGCTGGATGACTTGTTaGTGGGAGCAAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVCWMTC*WEQAGT
Trigger: TGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCA...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGGCTGAATCACAACGTTaGTGTCATGGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLAESQR*CHGWAA
Trigger: GGCTGCCCAACCATGACACCAACGTTGTGATTCAGC...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGGCTGAATCACAACGTTaGTGTCATGGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMAESQR*CHGWAA
Trigger: GGCTGCCCAACCATGACACCAACGTTGTGATTCAGC...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGACTGAGGCGACGGCATaGCTTGCTGAATCACAACGT +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLTEATA*LAESQR
Trigger: ACGTTGTGATTCAGCAAGCCATGCCGTCGCCTCAGT...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATCCATCATGTGTCCCATaGTGTTCATGTTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDPSCVP*CSCSHL
Trigger: CAAATGGGAACATGAACACCATGGGACACATGATGG...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTGGTGGCTGTATTGTCTaGGTTGGCTGCATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGGGCIV*VGCICC
Trigger: ACAACAGATGCAGCCAACCCAGACAATACAGCCACC...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATGTGATGGTATTATGCTaGATGACTTGTTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADVMVLC*MTCCWE
Trigger: CTCCCAGCAACAAGTCATCCAGCATAATACCATCAC...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTCGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVRYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAACGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKERYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCGCTACAGCTCTTCTTaGAGGCCAGGTCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFRYSSS*RPGLMV
Trigger: CACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCG...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATCTGGTACCAGAAAACTaGAGAAAAGCACCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADLVPEN*RKAPKR
Trigger: ACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAG...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATTTTCAGGCAAAGGGTTaGACTGATAAGAATGAAACC +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDFQAKG*TDKNET
Trigger: GGTTTCATTCTTATCAGTCCAACCCTTTGCCTGAAA...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCCTGGGCATTAGCAAGTaGACCAAGAGGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCLGISK*TKRRRG
Trigger: ACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAG...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATGCTGAGGGAGGAGAATaGAGTACAAAGATATTCTCC +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDAEGGE*STKIFS
Trigger: GGAGAATATCTTTGTACTCCATTCTCCTCCCTCAGC...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCCAGGACACTTTGGTTTaGAAGGTGAGAGAAAATTCT +
Preference number: 4 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAQDTLV*KVRENS
Trigger: AGAATTTTCTCTCACCTTCCAAACCAAAGTGTCCTG...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATACAGATGGTCCTCTGTTaGGAAGCGCTTACTGGACCT +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLIQMVLC*EALTGP
Trigger: AGGTCCAGTAAGCGCTTCCCAACAGAGGACCATCTG...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396299.6
CDS-3UTR TCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGACGGCATGGCTTGCTaGATCACAACGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEDGMAC*ITTLVS
Trigger: TGACACCAACGTTGTGATTCAGCAAGCCATGCCGTC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTGACCTTGCATCCCCATaGTGCTGGAGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKIDLASP*CWSSLT
Trigger: TGTCAGTGAACTCCAGCATCATGGGGATGCAAGGTC...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAAAGCACAGGGGTTGCTaGGATTTGGACCTTGCATCC +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEKHRGC*DLDLAS
Trigger: GGATGCAAGGTCCAAATCTCAGCAACCCCTGTGCTT...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGCCTCATTTTGGCTTCTaGATGCATTGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLPHFGF*MHWLDL
Trigger: CAGGTCCAGCCAATGCATTCAGAAGCCAAAATGAGG...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGTTCATGTTCCCATTTaGCATGGCAGCAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEVHVPI*HGSRVV
Trigger: CACCACCCTGCTGCCATGTCAAATGGGAACATGAAC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTGTTCATGTTCCCATTTaGCATGGCAGCAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFVHVPI*HGSRVV
Trigger: CACCACCCTGCTGCCATGTCAAATGGGAACATGAAC...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTCTGTTGTGTTGCTGGTaGAACCTGTGCTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVLLCCW*NLCLVA
Trigger: GGCAACCAAGCACAGGTTTCACCAGCAACACAACAG...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAACTGTTGTGTTGCTGGTaGAACCTGTGCTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKELLCCW*NLCLVA
Trigger: GGCAACCAAGCACAGGTTTCACCAGCAACACAACAG...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATAGACACTTCATTCTaGAGCTGCATGTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDIDTSF*SCMFVW
Trigger: CCAGACAAACATGCAGCTTCAGAATGAAGTGTCTAT...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAATGAAAGCCAGTCTTTaGAGAACTGAGGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SKNALKRKDAWYATALLGMKASL*RTEESS
Trigger: GGAAGACTCCTCAGTTCTTCAAAGACTGGCTTTCAT...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGATGAGAGCTCTGGAATaGGTGTGTGTAGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEMRALE*VCVEFE
Trigger: CTCAAATTCTACACACACTCATTCCAGAGCTCTCAT...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396298.6
CDS-3UTR GCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCCTGAGATTTGGACCTTaGATCCCCATGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCLRFGP*IPMMLE
Trigger: CTCCAGCATCATGGGGATGCAAGGTCCAAATCTCAG...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATACTGAGATTTGGACCTTaGATCCCCATGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLILRFGP*IPMMLE
Trigger: CTCCAGCATCATGGGGATGCAAGGTCCAAATCTCAG...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTATTTTGGCTTCTGAATaGATTGGCTGGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGILASE*IGWTWG
Trigger: TCCCCAGGTCCAGCCAATGCATTCAGAAGCCAAAAT...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAATGCTGGATGACTTGTTaGTGGGAGCAAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKECWMTC*WEQAGT
Trigger: TGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCA...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATGTAGTGATGGTATTATaGTGGATGACTTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDVVMVL*WMTCCW
Trigger: CCAGCAACAAGTCATCCAGCATAATACCATCACTAC...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATGGAGAGGTGAAGAGATaGTTGGTGGTATTATTTGGA +
Preference number: 4 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADGEVKR*LVVLFG
Trigger: TCCAAATAATACCACCAAGCATCTCTTCACCTCTCC...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATAAAGAGTGAAGTAGCCTaGACCTCATCCATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLIKSEVA*TSSMGF
Trigger: GAACCCCATGGATGAGGTGCAGGCTACTTCACTCTT...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTGGTTCAGGGACTATCTaGTTTGTATCACGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGGSGTI*FVSRAS
Trigger: ACTTGCCCGTGATACAAAGCAGATAGTCCCTGAACC...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATCACAGGTCTCAGCTGTaGTACCAATGGACGCACATA +
Preference number: 4 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYHRSQL*YQWTHI
Trigger: TATGTGCGTCCATTGGTAGCACAGCTGAGACCTGTG...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGAAAGGTATCAGAGTaGCACTTAAGAGTATTAATC +
Preference number: 4 (lower is better)
Translates to: LKERTHGTLQLFLEARSDGKVSE*HLRVLI
Trigger: GATTAATACTCTTAAGTGGCACTCTGATACCTTTCC...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGACCGTGTCCAAAATCTaGCTCTTGCTCCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLTVSKI*LLLHSL
Trigger: CAAGGAGTGGAGCAAGAGGCAGATTTTGGACACGGT...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396299.6
CDS-3UTR CCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGCATTTGTCGCTCCATTaGCATCAAGACGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMHLSLH*HQDGGR
Trigger: TCTTCCGCCGTCTTGATGCCAATGGAGCGACAAATG...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGGGGGTTGCTGAGATTTaGACCTTGCATCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLGVAEI*TLHPHD
Trigger: ATCATGGGGATGCAAGGTCCAAATCTCAGCAACCCC...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGTTCCCATTTGACATaGCAGCAGGGTGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINCSHLT*QQGGES
Trigger: TGACTCACCACCCTGCTGCCATGTCAAATGGGAACA...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTGGATGACTTGTTGCTaGGAGCAAGCTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKIWMTCC*EQAGTG
Trigger: TCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCA...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ACAGTAGAATGGCTTGTTTCAAGGAGGCACGACTGTGGTTCAGGGACTATCTGCACATTCTATCCTAACTaGATGGCTAGTTTTATAGCA +
Preference number: 4 (lower is better)
Translates to: TVEWLVSRRHDCGSGTICTFYPN*MASFIA
Trigger: TGCTATAAAACTAGCCATCCAGTTAGGATAGAATGT...GCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAACAAGCCATTCTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATCCACTGTTCTTTCAGTaGCCTCAGAGAGTCTATGGC +
Preference number: 4 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYPLFFQ*PQRVYG
Trigger: GCCATAGACTCTCTGAGGCCACTGAAAGAACAGTGG...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCCTACTGGCTGCTGGTTaGGAAGGGTCCTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCLLAAG*EGSFLL
Trigger: TAAGAGAAAGGACCCTTCCCAACCAGCAGCCAGTAG...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAACCTCATTTTGGCTTCTaGATGCATTGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEPHFGF*MHWLDL
Trigger: CAGGTCCAGCCAATGCATTCAGAAGCCAAAATGAGG...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTGCTTTCTTTTCCAATaGCATCACCCAGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGCFLFQ*HHPDLP
Trigger: AGGAAGGTCTGGGTGATGTCATTGGAAAAGAAAGCA...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCACCTCGCTGACCGATaGGGAAGTAGTGATGGTATT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFHLADR*GSSDGI
Trigger: AATACCATCACTACTTCCTCATCGGTCAGCGAGGTG...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGGCAGGCCGTGATGATTaGTTCATGAACACATGGATG +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMAGRDD*FMNTWM
Trigger: CATCCATGTGTTCATGAATCAATCATCACGGCCTGC...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGCTGTGTTAAGACTGTaGCTTGCATCCGTTGATGTG +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCAVLRL*LASVDV
Trigger: CACATCAACGGATGCAAGTCACAGTCTTAACACAGC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTCTGAGGTGCAGAACATaGGAGCTCTGGAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVLRCRT*ELWNEC
Trigger: ACACTCATTCCAGAGCTCTCATGTTCTGCACCTCAG...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396298.6
CDS-3UTR GCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTAGATATTCCGCTTGCTaGTCTCCTCTTCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVRYSAC*SPLPEP
Trigger: AGGCTCAGGAAGAGGAGAGCAGCAAGCGGAATATCT...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAAGATATTCCGCTTGCTaGTCTCCTCTTCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKERYSAC*SPLPEP
Trigger: AGGCTCAGGAAGAGGAGAGCAGCAAGCGGAATATCT...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTTCGAGATATTCCGCTTaGTGCTCTCCTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVSRYSA*CSPLPE
Trigger: CTCAGGAAGAGGAGAGCAGCAAGCGGAATATCTCGA...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTCCACCAACTGCATTATaGATCGAGATATTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGPPTAL*IEIFRL
Trigger: CAAGCGGAATATCTCGATGCATAATGCAGTTGGTGG...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCATTTTGGCTTCTGAATaGATTGGCTGGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCILASE*IGWTWG
Trigger: TCCCCAGGTCCAGCCAATGCATTCAGAAGCCAAAAT...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCATTGTCTGGGTTGGCTaGATCTGTTGTGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCIVWVG*ICCVAG
Trigger: ACCAGCAACACAACAGATGCAGCCAACCCAGACAAT...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGATTGTCTGGGTTGGCTaGATCTGTTGTGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMIVWVG*ICCVAG
Trigger: ACCAGCAACACAACAGATGCAGCCAACCCAGACAAT...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTCCTTGTGATTCTTTCTaGATGGCTGTTATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGPCDSF*MAVIGQ
Trigger: CTGCCCAATAACAGCCATGCAGAAAGAATCACAAGG...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGAGGCAAGTTCTTAACTaGCGAGGCTTTCAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLRQVLN*RGFQPN
Trigger: GTTAGGCTGAAAGCCTCGGCAGTTAAGAACTTGCCT...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTTGTGAGCACACAAACTaGTTGTCTCCCACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFCEHTN*LSPTGC
Trigger: ACAGCCTGTGGGAGACAAGCAGTTTGTGTGCTCACA...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTGGGGTTGCTGAGATTTaGACCTTGCATCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFGVAEI*TLHPHD
Trigger: ATCATGGGGATGCAAGGTCCAAATCTCAGCAACCCC...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAATGTTCCCATTTGACATaGCAGCAGGGTGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKECSHLT*QQGGES
Trigger: TGACTCACCACCCTGCTGCCATGTCAAATGGGAACA...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTTGTTCCCATTTGACATaGCAGCAGGGTGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFCSHLT*QQGGES
Trigger: TGACTCACCACCCTGCTGCCATGTCAAATGGGAACA...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGCTGTATTGTCTGGGTTaGCTGCATCTGTTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLLYCLG*LHLLCC
Trigger: GCAACACAACAGATGCAGCCAACCCAGACAATACAG...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTCTGTATTGTCTGGGTTaGCTGCATCTGTTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVLYCLG*LHLLCC
Trigger: GCAACACAACAGATGCAGCCAACCCAGACAATACAG...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTGGTGGCTGTATTGTCTaGGTTGGCTGCATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVGGCIV*VGCICC
Trigger: ACAACAGATGCAGCCAACCCAGACAATACAGCCACC...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTGTGATGGTATTATGCTaGATGACTTGTTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGVMVLC*MTCCWE
Trigger: CTCCCAGCAACAAGTCATCCAGCATAATACCATCAC...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CAGTCAAACTGTCAAGTTGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACTGCCCCCACATCAAAATTTaGACTTTCGCAATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: QSNCQVAERRKLRQVLNCPHIKI*TFAIKA
Trigger: AGCCTTGATTGCGAAAGTCCAAATTTTGATGTGGGG...GCAGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp ACACACACACACATTAAGAGGTCAAGCATTCAAATGGAGATGAAACACCAGCACATTAGCACAGTAGAATaGCTTGTTTCAAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: THTHIKRSSIQMEMKHQHISTVE*LVSRRH
Trigger: GTGCCTCCTTGAAACAAGCCATTCTACTGTGCTAAT...GTGCTGGTGTTTCATCTCCATTTGAATGCTTGACCTCTTAATGTGTGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp ACACACACACACATTAAGAGGTCAAGCATTCAAATGGAGATGAAACACCAGCACTCTTTTAACAAGTGTTaGCAATTTGGCCTTACCCCC +
Preference number: 4 (lower is better)
Translates to: THTHIKRSSIQMEMKHQHSFNKC*QFGLTP
Trigger: GGGGGTAAGGCCAAATTGCCAACACTTGTTAAAAGA...GTGCTGGTGTTTCATCTCCATTTGAATGCTTGACCTCTTAATGTGTGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCATGTTTGTGCCTATaGATCATCAGATGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGSCLCL*IIRWSS
Trigger: AGAGGACCATCTGATGATTCATAGGCACAAACATGA...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCTTTCTTTTCCAATaGCATCACCCAGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINCFLFQ*HHPDLP
Trigger: AGGAAGGTCTGGGTGATGTCATTGGAAAAGAAAGCA...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATATGCTTTCTTTTCCAATaGCATCACCCAGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLICFLFQ*HHPDLP
Trigger: AGGAAGGTCTGGGTGATGTCATTGGAAAAGAAAGCA...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTGCATGTTTGTCTGGGTaGGTTCTTCTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGACLSG*VLLLSF
Trigger: AAAAGAAAGCAGAAGAACTCACCCAGACAAACATGC...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTATAGACACTTCATTCTaGAGCTGCATGTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGIDTSF*SCMFVW
Trigger: CCAGACAAACATGCAGCTTCAGAATGAAGTGTCTAT...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTTGGTATTATGCTGGATaGCTTGTTGCTGGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVWYYAG*LVAGSK
Trigger: CTTGCTCCCAGCAACAAGTCATCCAGCATAATACCA...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAATGGTATTATGCTGGATaGCTTGTTGCTGGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEWYYAG*LVAGSK
Trigger: CTTGCTCCCAGCAACAAGTCATCCAGCATAATACCA...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTTGGTATTATGCTGGATaGCTTGTTGCTGGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFWYYAG*LVAGSK
Trigger: CTTGCTCCCAGCAACAAGTCATCCAGCATAATACCA...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTCTTGGAGGCCAGGTCTaGTGGTGCATTTTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVLGGQV*WCILKN
Trigger: ATTCTTTAAAATGCACCATCAGACCTGGCCTCCAAG...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATAATGAAAGCCAGTCTTTaGAGAACTGAGGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLIMKASL*RTEESS
Trigger: GGAAGACTCCTCAGTTCTTCAAAGACTGGCTTTCAT...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGATGAAAGCCAGTCTTTaGAGAACTGAGGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMMKASL*RTEESS
Trigger: GGAAGACTCCTCAGTTCTTCAAAGACTGGCTTTCAT...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAAGAAGTAGGATAGTTTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKERSRIV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAACTATCCTACTTCT...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTGCATTCAAATGGAGATaGAACACCAGCACCTGCCTA +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKIAFKWR*NTSTCL
Trigger: TAGGCAGGTGCTGGTGTTTCATCTCCATTTGAATGC...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp CAGTCAAACTGTCAAGTTGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACTGCACATTCCTTTCTCTATaGGGCAGATGTGATTTAGCA +
Preference number: 4 (lower is better)
Translates to: QSNCQVAERRKLRQVLNCTFLSL*GRCDLA
Trigger: TGCTAAATCACATCTGCCTCATAGAGAAAGGAATGT...GCAGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTCCACCAACTGCATTATaGATCGAGATATTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVPPTAL*IEIFRL
Trigger: CAAGCGGAATATCTCGATGCATAATGCAGTTGGTGG...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCCCACCAACTGCATTATaGATCGAGATATTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCPPTAL*IEIFRL
Trigger: CAAGCGGAATATCTCGATGCATAATGCAGTTGGTGG...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATACATGGCCCCACCAACTaGATTATGCATCGAGATATT +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLIHGPTN*IMHRDI
Trigger: AATATCTCGATGCATAATGCAGTTGGTGGGGCCATG...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTCATGGCCCCACCAACTaGATTATGCATCGAGATATT +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVHGPTN*IMHRDI
Trigger: AATATCTCGATGCATAATGCAGTTGGTGGGGCCATG...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGAGGGTGGTGAGTCAATaGAGCCTTCAACCTCATTTT +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMRVVSQ*SLQPHF
Trigger: AAAATGAGGTTGAAGGCTGCATTGACTCACCACCCT...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTATTGTCTGGGTTGGCTaGATCTGTTGTGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFIVWVG*ICCVAG
Trigger: ACCAGCAACACAACAGATGCAGCCAACCCAGACAAT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTGTAGTGATGGTATTATaGTGGATGACTTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGVVMVL*WMTCCW
Trigger: CCAGCAACAAGTCATCCAGCATAATACCATCACTAC...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ATTGCTGCTGTGTCGTCTTATCCTACCTTAGATTATAATTGTGAAATAGAGGTGGACAACAGTCAGATGTaGACCAGGGTGCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: IAAVSSYPTLDYNCEIEVDNSQM*TRVHKR
Trigger: TCTTTTGTGCACCCTGGTGCACATCTGACTGTTGTC...CACCTCTATTTCACAATTATAATCTAAGGTAGGATAAGACGACACAGCAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATACCATCATGTGTCCCATaGTGTTCATGTTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLIPSCVP*CSCSHL
Trigger: CAAATGGGAACATGAACACCATGGGACACATGATGG...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATGTGATGGTATTATGCTaGATGACTTGTTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINVMVLC*MTCCWE
Trigger: CTCCCAGCAACAAGTCATCCAGCATAATACCATCAC...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR TCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGTCATGTTTGTGCCTATaGATCATCAGATGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMSCLCL*IIRWSS
Trigger: AGAGGACCATCTGATGATTCATAGGCACAAACATGA...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGTTGGGGTCGGAGTTTaGTCTGATAACATATTGTCT +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCVGVGV*SDNILS
Trigger: AGACAATATGTTATCAGATCAAACTCCGACCCCAAC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATGCATGTTTGTCTGGGTaGGTTCTTCTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINACLSG*VLLLSF
Trigger: AAAAGAAAGCAGAAGAACTCACCCAGACAAACATGC...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCTTGGAGGCCAGGTCTaGTGGTGCATTTTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFLGGQV*WCILKN
Trigger: ATTCTTTAAAATGCACCATCAGACCTGGCCTCCAAG...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAAAAGCAGCAACGTGTTaGTTCCTGCAGTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEKAATC*FLQSPN
Trigger: ATTTGGTGACTGCAGGAAGCAACACGTTGCTGCTTT...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTACAAACGGCCTCTCCTaGTCCAAATTCATCTTGGAT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFTNGLS*SKFILD
Trigger: ATCCAAGATGAATTTGGAGCAGGAGAGGCCGTTTGT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357727.7
ENST00000396300.6
CDS-3UTR GCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTCCACCAACTGCATTATaGATCGAGATATTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVPPTAL*IEIFRL
Trigger: CAAGCGGAATATCTCGATGCATAATGCAGTTGGTGG...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp ATTGCTGCTGTGTCGTCTTATCCTACCTTAGATTATAATTGTGAAATAGAGGTGAGGGTGGTGAGTCAATaGAGCCTTCAACCTCATTTT +
Preference number: 4 (lower is better)
Translates to: IAAVSSYPTLDYNCEIEVRVVSQ*SLQPHF
Trigger: AAAATGAGGTTGAAGGCTGCATTGACTCACCACCCT...CACCTCTATTTCACAATTATAATCTAAGGTAGGATAAGACGACACAGCAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTAGGGTGGTGAGTCAATaGAGCCTTCAACCTCATTTT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFRVVSQ*SLQPHF
Trigger: AAAATGAGGTTGAAGGCTGCATTGACTCACCACCCT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTAGGGTGGTGAGTCAATaGAGCCTTCAACCTCATTTT +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVRVVSQ*SLQPHF
Trigger: AAAATGAGGTTGAAGGCTGCATTGACTCACCACCCT...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR GCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCTTGTGATTCTTTCTaGATGGCTGTTATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFPCDSF*MAVIGQ
Trigger: CTGCCCAATAACAGCCATGCAGAAAGAATCACAAGG...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTGGAGAGGTGAAGAGATaGTTGGTGGTATTATTTGGA +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVGEVKR*LVVLFG
Trigger: TCCAAATAATACCACCAAGCATCTCTTCACCTCTCC...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGGAGAGGTGAAGAGATaGTTGGTGGTATTATTTGGA +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCGEVKR*LVVLFG
Trigger: TCCAAATAATACCACCAAGCATCTCTTCACCTCTCC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGGGAGAGGTGAAGAGATaGTTGGTGGTATTATTTGGA +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLGEVKR*LVVLFG
Trigger: TCCAAATAATACCACCAAGCATCTCTTCACCTCTCC...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR GCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCAGCAGTCAAAGAGTaGTTAACTGTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKISAVKE*LTVVGR
Trigger: CCTTCCCACAACAGTTAAGCACTCTTTGACTGCTGA...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCTGTCTCTGTCTGTTGTaGAGATGTAGCAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCCLCLL*RCSRED
Trigger: ATCTTCTCTGCTACATCTCCACAACAGACAGAGACA...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAACCATCATGTGTCCCATaGTGTTCATGTTCCCATTTG +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEPSCVP*CSCSHL
Trigger: CAAATGGGAACATGAACACCATGGGACACATGATGG...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCAAAAGAAAGGACGCATaGTACGCTACAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCKRKDA*YATALL
Trigger: AAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTT...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCTGGTACCAGAAAACTaGAGAAAAGCACCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFLVPEN*RKAPKR
Trigger: ACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAG...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGAATGGAGAAGAAAACTaGGCATTAGCAAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMNGEEN*ALASGP
Trigger: TGGTCCACTTGCTAATGCCCAGTTTTCTTCTCCATT...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTAATGGAGAAGAAAACTaGGCATTAGCAAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: TTAQTQHELRCQKISYPVNGEEN*ALASGP
Trigger: TGGTCCACTTGCTAATGCCCAGTTTTCTTCTCCATT...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCCCCCTATGGAAACACTaGGTTTTCTTTCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCPLWKH*VFFLSL
Trigger: CAAAGAGAGAAAGAAAACCCAGTGTTTCCATAGGGG...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAACAGCTGTGCTACCAATaGACGCACATAAATGTACCT +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEQLCYQ*THINVP
Trigger: AGGTACATTTATGTGCGTCCATTGGTAGCACAGCTG...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTACTGGCTCTTCTCCTTaGCATTCTTGTAGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKITGSSP*HSCSRL
Trigger: AAGCCTACTACAAGAATGCCAAGGAGAAGAGCCAGT...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCAACCATATAGTGTACTaGCTCTTCTCCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCNHIVY*LFSLAF
Trigger: GAATGCCAAGGAGAAGAGCCAGTACACTATATGGTT...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CAA 72 bp AATTACTATAATATATACTGTGAGCACACAAACTGCTaGTCTCCCACAGGCTGTGTTAAGACTGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: NYYNIYCEHTNC*SPTGCVKTVTC
Trigger: GCAAGTCACAGTCTTAACACAGCCTGTGGGAGACAAGCAGTTTGTGTGCTCACAGTATATATTATAGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTTCATGTTTGTGCCTATaGATCATCAGATGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVSCLCL*IIRWSS
Trigger: AGAGGACCATCTGATGATTCATAGGCACAAACATGA...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTGCATGTTTGTCTGGGTaGGTTCTTCTGCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NSGDTTAQTQHELRCQKIACLSG*VLLLSF
Trigger: AAAAGAAAGCAGAAGAACTCACCCAGACAAACATGC...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTATAGACACTTCATTCTaGAGCTGCATGTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFIDTSF*SCMFVW
Trigger: CCAGACAAACATGCAGCTTCAGAATGAAGTGTCTAT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR TCA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATATGGATCTGTCTTACTTaGCATCTAGGTATACCTCAT +
Preference number: 4 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLIWICLT*HLGIPH
Trigger: ATGAGGTATACCTAGATGTCAAGTAAGACAGATCCA...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATCTCAAAACCATCTTTTaGAAGCACTGCATACAAGGA +
Preference number: 4 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYLKTIF*KHCIQG
Trigger: TCCTTGTATGCAGTGCTTTCAAAAGATGGTTTTGAG...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTTTTACAATTACTTCTaGAACCCAGAGGTACCTCCT +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINFYNYF*NPEVPP
Trigger: AGGAGGTACCTCTGGGTTGCAGAAGTAATTGTAAAA...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGTAGTGATGGTATTATaGTGGATGACTTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEVVMVL*WMTCCW
Trigger: CCAGCAACAAGTCATCCAGCATAATACCATCACTAC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR GCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGCCTTCTCAGATATACTaGATAATGGAGCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLPSQIY*IMELEW
Trigger: CCATTCAAGCTCCATTATGCAGTATATCTGAGAAGG...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCATGCCAGAGCATAAATaGTTTAGGCAGTTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCMPEHK*FRQFLS
Trigger: TGACAGAAACTGCCTAAAGCATTTATGCTCTGGCAT...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396299.6
CDS-3UTR GCA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGAGAAACAGGGACGAATaGCAGAGCATAAATGCTTTA +
Preference number: 4 (lower is better)
Translates to: TQHELRCQKISYPVTLDLRNRDE*QSINAL
Trigger: TAAAGCATTTATGCTCTGGCATTCGTCCCTGTTTCT...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396299.6
CDS-3UTR CCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGGTGACTAAAAATTTGTaGAACTGTCTAGCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMVTKNL*NCLASN
Trigger: GTTGGAGGCTAGACAGTTCCACAAATTTTTAGTCAC...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp ATTGCTGCTGTGTCGTCTTATCCTACCTTAGATTATAATTGTGAAATAGAGGTGTGTCTCTGTCTGTTGTaGAGATGTAGCAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: IAAVSSYPTLDYNCEIEVCLCLL*RCSRED
Trigger: ATCTTCTCTGCTACATCTCCACAACAGACAGAGACA...CACCTCTATTTCACAATTATAATCTAAGGTAGGATAAGACGACACAGCAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAATGTCTCTGTCTGTTGTaGAGATGTAGCAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKECLCLL*RCSRED
Trigger: ATCTTCTCTGCTACATCTCCACAACAGACAGAGACA...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGTTTCAGGCAAAGGGTTaGACTGATAAGAATGAAACC +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMFQAKG*TDKNET
Trigger: GGTTTCATTCTTATCAGTCCAACCCTTTGCCTGAAA...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTAATGGAGAAGAAAACTaGGCATTAGCAAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVNGEEN*ALASGP
Trigger: TGGTCCACTTGCTAATGCCCAGTTTTCTTCTCCATT...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTACATTCATCCATGGCTaGGATTTTCACTCTACCTCT +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFTFIHG*DFHSTS
Trigger: AGAGGTAGAGTGAAAATCCCAGCCATGGATGAATGT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CAA 72 bp GAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTaGGATCTGTCTTACTTGACATCTAGGTATACCTCA +
Preference number: 4 (lower is better)
Translates to: ELRCQKISYPVT*DLSYLTSRYTS
Trigger: TGAGGTATACCTAGATGTCAAGTAAGACAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
3UTR CAA 72 bp CTGTCCCTAATTATGTTACAAGGCAACATTGTATTTTaGAGACCTAGGAATGAAATCGATAGGGCCACTGTT +
Preference number: 4 (lower is better)
Translates to: LSLIMLQGNIVF*RPRNEIDRATV
Trigger: AACAGTGGCCCTATCGATTTCATTCCTAGGTCTCAAAAATACAATGTTGCCTTGTAACATAATTAGGGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTTGGATCTGTCTTACTTaGCATCTAGGTATACCTCAT +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVWICLT*HLGIPH
Trigger: ATGAGGTATACCTAGATGTCAAGTAAGACAGATCCA...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR TCA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATATTCTAATTATATGTTaGGGCCGGTTTGCTAATGTG +
Preference number: 4 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYILIIC*GRFANV
Trigger: CACATTAGCAAACCGGCCTCAACATATAATTAGAAT...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR TCA 90 bp ATTGCTGCTGTGTCGTCTTATCCTACCTTAGATTATAATTGTGAAATAGAGGTGTCCACTCAACACAACTaGTACCTTTCATTATCTCCT +
Preference number: 4 (lower is better)
Translates to: IAAVSSYPTLDYNCEIEVSTQHN*YLSLSP
Trigger: AGGAGATAATGAAAGGTATCAGTTGTGTTGAGTGGA...CACCTCTATTTCACAATTATAATCTAAGGTAGGATAAGACGACACAGCAGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAATTTCAGGCAAAGGGTTaGACTGATAAGAATGAAACC +
Preference number: 4 (lower is better)
Translates to: RTEESSRSELILKMPLKEFQAKG*TDKNET
Trigger: GGTTTCATTCTTATCAGTCCAACCCTTTGCCTGAAA...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CCA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGGTCTGTTACCGCAGCTaGTTTATGATTTTAATGACA +
Preference number: 4 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMVCYRS*FMILMT
Trigger: TGTCATTAAAATCATAAACCAGCTGCGGTAACAGAC...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTTTTCTGATGACAAGTTaGAAAGGTATCAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFFLMTS*KGIRVP
Trigger: TGGCACTCTGATACCTTTCCAACTTGTCATCAGAAA...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357727.7
3UTR CAA 72 bp GAGCTATATATAATGCACATCAGTCAAACTGTCAAGTaGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACT +
Preference number: 4 (lower is better)
Translates to: ELYIMHISQTVK*LNEENSGKFLT
Trigger: AGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTGATGTGCATTATATATAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR GCA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTTCCTGTTCAAATTTTaGTTTGGTCCTTTGAATTCC +
Preference number: 4 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINFLFKF*FGPLNS
Trigger: GGAATTCAAAGGACCAAAGCAAAATTTGAACAGGAA...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CCA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTATAATGGAGCTTGAATaGCTTAAAGCTACTGCATAT +
Preference number: 4 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVIMELE*LKATAY
Trigger: ATATGCAGTAGCTTTAAGCCATTCAAGCTCCATTAT...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS GCA 90 bp GAGAATCTGCCGCAGGGGGAGACTCCGCCGCCAGGTCTTGGGAATTaGCTGGGCGCCGCCAAAGCTCGAGCCGGAGCTGTCATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: ENLPQGETPPPGLGN*LGAAKARAGAVIWG
Trigger: GCCCCAAATGACAGCTCCGGCTCGAGCTTTGGCGGCGCCCAGGCAATTCCCAAGACCTGGCGGCGGAGTCTCCCCCTGCGGCAGATTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS GCA 90 bp CGTCTCCGCTGCCGCTTGACCGCACTTCTGGAGGGCTCCGCACCTTaGCAGGTCTCTGGAGGCAAACACACACCCCCGATTCATAACTGG +
Preference number: 5 (lower is better)
Translates to: RLRCRLTALLEGSAP*QVSGGKHTPPIHNW
Trigger: CCAGTTATGAATCGGGGGTGTGTGTTTGCCTCCAGAGACCTGGCAAGGTGCGGAGCCCTCCAGAAGTGCGGTCAAGCGGCAGCGGAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS TCA 90 bp ACAACGTTGGTGTCATGGTTGGGCAGCCGAGCGCTGCTAAGCTGGTaGGTTCCGGGCCCCGTCATGGCCCCACCAACTGCATTATGCATC +
Preference number: 5 (lower is better)
Translates to: TTLVSWLGSRALLSW*VPGPVMAPPTALCI
Trigger: GATGCATAATGCAGTTGGTGGGGCCATGACGGGGCCCGGAACTCACCAGCTTAGCAGCGCTCGGCTGCCCAACCATGACACCAACGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS GCA 90 bp TTGGTTGCCGGTGTGCAGGGGCGGATGTGGCGAGGTCTGGTGATGTaGTGGGTGTGCATGAAGGTGGGAATGGGAGTGGTGATGTGGATG +
Preference number: 5 (lower is better)
Translates to: LVAGVQGRMWRGLVM*WVCMKVGMGVVMWM
Trigger: CATCCACATCACCACTCCCATTCCCACCTTCATGCACACCCAGCACATCACCAGACCTCGCCACATCCGCCCCTGCACACCGGCAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS GCA 90 bp GCTGCTAAGCTGGTGAGTTCCGGGCCCCGTCATGGCCCCACCAACTaGATTATGCATCGAGATATTCCGCTTGCTGCTCTCCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AAKLVSSGPRHGPTN*IMHRDIPLAALLFL
Trigger: CAGGAAGAGGAGAGCAGCAAGCGGAATATCTCGATGCATAATGCAGTTGGTGGGGCCATGACGGGGCCCGGAACTCACCAGCTTAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000424599.5
CDS-3UTR CAA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATACGTTGGTGTCATGGTaGGGCAGCCGAGCGCTGCTA +
Preference number: 5 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHTLVSW*GSRALL
Trigger: TAGCAGCGCTCGGCTGCCCAACCATGACACCAACGT...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGTGACTTGCATCCGTaGATGTGGCCGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ERTHGTLQLFLEARSDGACDLHP*MWPQER
Trigger: CCTCTCCTGCGGCCACATCAACGGATGCAAGTCACA...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS GCA 90 bp CTGCTTTCTTTTCCAATGACATCACCCAGACCTTCCTCTTCTGTCTaGAGCGGGTGGCAGCTGCCCGGTTCCGTTCCAGAAATTTCCGCC +
Preference number: 5 (lower is better)
Translates to: LLSFPMTSPRPSSSV*SGWQLPGSVPEISA
Trigger: GGCGGAAATTTCTGGAACGGAACCGGGCAGCTGCCACCCGCTGCAGACAGAAGAGGAAGGTCTGGGTGATGTCATTGGAAAAGAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCAAGGCGACGGCATGGCTaGCTGAATCACAACGTTGGT +
Preference number: 5 (lower is better)
Translates to: ERTHGTLQLFLEARSDGARRRHG*LNHNVG
Trigger: ACCAACGTTGTGATTCAGCAAGCCATGCCGTCGCCT...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp CTGAGGGTGGAGCTTCCTACCACCTCGCTGACCGATGAGGAAGTAGTGATGGTAATGCTGGATGACTTGTaGCTGGGAGCAAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LRVELPTTSLTDEEVVMVMLDDL*LGASWD
Trigger: GTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCAT...TACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAAGCTCCACCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR CAA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCAGATGGTCCTCTGTaGGGAAGCGCTTACTGGACC +
Preference number: 5 (lower is better)
Translates to: ERTHGTLQLFLEARSDGASDGPL*GSAYWT
Trigger: GGTCCAGTAAGCGCTTCCCAACAGAGGACCATCTGA...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396299.6
CDS-3UTR CAA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCAACGTTGGTGTCATGGTaGGGCAGCCGAGCGCTGCTA +
Preference number: 5 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSTLVSW*GSRALL
Trigger: TAGCAGCGCTCGGCTGCCCAACCATGACACCAACGT...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATAGGCGACGGCATGGCTaGCTGAATCACAACGTTGGT +
Preference number: 5 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHRRRHG*LNHNVG
Trigger: ACCAACGTTGTGATTCAGCAAGCCATGCCGTCGCCT...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS GCA 90 bp GTAAGAGTGACTCAGATCAGAGGACTGCCTTGTAAATCAGCCACATaGAGCACTGAGACATCCATCAGGGCGGTGTGCCCTTTCCCCACT +
Preference number: 5 (lower is better)
Translates to: VRVTQIRGLPCKSAT*STETSIRAVCPFPT
Trigger: AGTGGGGAAAGGGCACACCGCCCTGATGGATGTCTCAGTGCTGCATGTGGCTGATTTACAAGGCAGTCCTCTGATCTGAGTCACTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461921.5
CDS-3UTR CAA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATTCAGATGGTCCTCTGTaGGGAAGCGCTGGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKERTHGTLQLFLEARSDSDGPL*GSAGSS
Trigger: GCTGCTCCCAGCGCTTCCCAACAGAGGACCATCTGA...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357727.7
ENST00000396300.6
CDS-3UTR CAA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCACGTTGGTGTCATGGTaGGGCAGCCGAGCGCTGCTA +
Preference number: 5 (lower is better)
Translates to: KMPLKERTHGTLQLFLEATLVSW*GSRALL
Trigger: TAGCAGCGCTCGGCTGCCCAACCATGACACCAACGT...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AGGGTGGAGCTTCCTACCACCTCGCTGACCGATGAGGAAGTAGTGATGGTATTAACGCTACAGCTCTTCTaGGAGGCCAGGTCTGATGGT +
Preference number: 5 (lower is better)
Translates to: RVELPTTSLTDEEVVMVLTLQLF*EARSDG
Trigger: ACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGT...TAATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAAGCTCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR CAA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCATCCCCAGCCAAAGGCTaGTCTGTTACCGCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSSPAKG*SVTAAG
Trigger: ACCAGCTGCGGTAACAGACAAGCCTTTGGCTGGGGA...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGCTGTATTGTCTGGGTaGGCTGCATCTGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHAVLSG*AASVVL
Trigger: CAACACAACAGATGCAGCCAACCCAGACAATACAGC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGCTGGGGTGGCTGTATaGTCTGGGTTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAAGVAV*SGLAAS
Trigger: AGATGCAGCCAACCCAGACAATACAGCCACCCCAGC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCACGCTACAGCTCTTCTaGGAGGCCAGGTCTGATGGT +
Preference number: 5 (lower is better)
Translates to: EENWALASGPRGGEVKRCTLQLF*EARSDG
Trigger: ACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGT...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp ACAGGATTTTCCCTCCTTAGGACAGGTGCTCTGCAGGCCGTGATGATTGATTCAAGGCTTTCTAGGAAATaGGGGTGGGGTGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: TGFSLLRTGALQAVMIDSRLSRK*GWGGER
Trigger: CCTCTCTCCACCCCACCCCAATTTCCTAGAAAGCCT...TGAATCAATCATCACGGCCTGCAGAGCACCTGTCCTAAGGAGGGAAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS TCA 90 bp GCCCATCATCTCCATCATGTGTCCCATGGTGTTCATGTTCCCATTTaGCATGGCAGCAGGGTGGTGAGTCAATGCAGCCTTCAACCTCAT +
Preference number: 5 (lower is better)
Translates to: AHHLHHVSHGVHVPI*HGSRVVSQCSLQPH
Trigger: ATGAGGTTGAAGGCTGCATTGACTCACCACCCTGCTGCCATGTCAAATGGGAACATGAACACCATGGGACACATGATGGAGATGATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS TCA 90 bp TCTCCTTGGTTCCTTCCTTCGCATCTTGCCCCTCTAAGAACTTCGTaGAAAGTTCAAGTGATTCTGCCGAGAATCTGCCGCAGGGGGAGA +
Preference number: 5 (lower is better)
Translates to: SPWFLPSHLAPLRTS*KVQVILPRICRRGR
Trigger: TCTCCCCCTGCGGCAGATTCTCGGCAGAATCACTTGAACTTTTCACGAAGTTCTTAGAGGGGCAAGATGCGAAGGAAGGAACCAAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS-3UTR CAA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCACATTTGTCGCTCCATaGGCATCAAGACGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: EENWALASGPRGGEVKRCTFVAP*ASRRRK
Trigger: CTTCCGCCGTCTTGATGCCAATGGAGCGACAAATGT...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGGAGAAGCACAGGGGTaGCTGAGATTTGGACCTTGC +
Preference number: 5 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAGEAQG*LRFGPC
Trigger: GCAAGGTCCAAATCTCAGCAACCCCTGTGCTTCTCC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGAAACCTGTGCTTGGTaGCCGGTGTGCAGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: SKNALKRKDAWYATALLGETCAW*PVCRGG
Trigger: TCCGCCCCTGCACACCGGCAACCAAGCACAGGTTTC...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCATGCTGGATGACTTGTaGCTGGGAGCAAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAMLDDL*LGASWD
Trigger: GTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCAT...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCGAGCACACAAACTGCTaGTCTCCCACAGGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: EENWALASGPRGGEVKRCEHTNC*SPTGCV
Trigger: AACACAGCCTGTGGGAGACAAGCAGTTTGTGTGCTC...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATTCCAAAATCTGCCTCTaGCTCCACTCCTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHSKICL*LHSLDS
Trigger: TGAATCCAAGGAGTGGAGCAAGAGGCAGATTTTGGA...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396299.6
CDS-3UTR CAA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCGGCTGTCTCTGTCTGTaGTGGAGATGTAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: EENWALASGPRGGEVKRCGCLCL*WRCSRE
Trigger: TTCTCTGCTACATCTCCACAACAGACAGAGACAGCC...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGGCCTTCAACCTCATTTaGGCTTCTGAATGCATTGGC +
Preference number: 5 (lower is better)
Translates to: MPLKERTHGTLQLFLEARAFNLI*ASECIG
Trigger: GCCAATGCATTCAGAAGCCAAAATGAGGTTGAAGGC...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCGCTGCATCTGTTGTGTaGCTGGTGAAACCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: EENWALASGPRGGEVKRCAASVV*LVKPVL
Trigger: AAGCACAGGTTTCACCAGCAACACAACAGATGCAGC...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATCTGCATGGCTGTTATaGGGCAGTCTTTATGTGTTA +
Preference number: 5 (lower is better)
Translates to: ERTHGTLQLFLEARSDGASAWLL*GSLYVL
Trigger: TAACACATAAAGACTGCCCAATAACAGCCATGCAGA...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp GGAAGTAGTGATGGTATTATGCTGGATGACTTGTTGCTGGGAGCAAGCTGGGACATTATGCTGGATGACTaGTTGCTGGGAGCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: GSSDGIMLDDLLLGASWDIMLDD*LLGASW
Trigger: CCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAAT...GTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498316.3
CDS-3UTR CAA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATTCCTACCCAGTTACCTaGGATCTGTCTTACTTGACA +
Preference number: 5 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHSYPVT*DLSYLT
Trigger: TGTCAAGTAAGACAGATCCAAGGTAACTGGGTAGGA...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp GGCCGTATAAAACCAGTCGCAATCCAAGGGTGTCATGTTATAGCCCCACATCAATCTACTGGCTGCTGGTaGGGAAGGGTCCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: GRIKPVAIQGCHVIAPHQSTGCW*GRVLSL
Trigger: AAGAGAAAGGACCCTTCCCAACCAGCAGCCAGTAGA...TTGATGTGGGGCTATAACATGACACCCTTGGATTGCGACTGGTTTTATACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS TCA 90 bp GGGGTGGTGGAAGAAAGAGGTTGTCATCTCCAATATCACTGTCAATaGGTGTTTCCTTTCAGTCATGCCGCTTGCTGCTCTCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GVVEERGCHLQYHCQ*VFPFSHAACCSPLP
Trigger: AGGAAGAGGAGAGCAGCAAGCGGCATGACTGAAAGGAAACACTCATTGACAGTGATATTGGAGATGACAACCTCTTTCTTCCACCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469531.1
CDS-3UTR CAA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCGGCTGTCTCTGTCTGTaGTGGAGATGTAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: KMPLKERTHGTLQLFLEAGCLCL*WRCSRE
Trigger: TTCTCTGCTACATCTCCACAACAGACAGAGACAGCC...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGGAGAAGCACAGGGGTaGCTGAGATTTGGACCTTGC +
Preference number: 5 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEGEAQG*LRFGPC
Trigger: GCAAGGTCCAAATCTCAGCAACCCCTGTGCTTCTCC...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGGAAACCTGTGCTTGGTaGCCGGTGTGCAGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: TQHELRCQKISYPVTLDLETCAW*PVCRGG
Trigger: TCCGCCCCTGCACACCGGCAACCAAGCACAGGTTTC...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGAAACCTGTGCTTGGTaGCCGGTGTGCAGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCETCAW*PVCRGG
Trigger: TCCGCCCCTGCACACCGGCAACCAAGCACAGGTTTC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGCTGTATTGTCTGGGTaGGCTGCATCTGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LKERTHGTLQLFLEARSDAVLSG*AASVVL
Trigger: CAACACAACAGATGCAGCCAACCCAGACAATACAGC...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp ACACACACACACATTAAGAGGTCAAGCATTCAAATGGAGATGAAACACCAGCACGCTGGGGTGGCTGTATaGTCTGGGTTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: THTHIKRSSIQMEMKHQHAGVAV*SGLAAS
Trigger: AGATGCAGCCAACCCAGACAATACAGCCACCCCAGC...GTGCTGGTGTTTCATCTCCATTTGAATGCTTGACCTCTTAATGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGATGCTGGATGACTTGTaGCTGGGAGCAAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEMLDDL*LGASWD
Trigger: GTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCAT...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGAGGTGAAGAGATGCTaGGTGGTATTATTTGGACAT +
Preference number: 5 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHEVKRC*VVLFGH
Trigger: ATGTCCAAATAATACCACCAAGCATCTCTTCACCTC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp ATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTGTGAAAAGCAAGAGTaGAATGAACTCCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: MPLKERTHGTLQLFLEARCEKQE*NELQLW
Trigger: CCACAGCTGGAGTTCATTCAACTCTTGCTTTTCACA...CCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS TCA 90 bp TGTCCCATGGTGTTCATGTTCCCATTTGACATGGCAGCAGGGTGGTaGGTCAATGCAGCCTTCAACCTCATTTTGGCTTCTGAATGCATT +
Preference number: 5 (lower is better)
Translates to: CPMVFMFPFDMAAGW*VNAAFNLILASECI
Trigger: AATGCATTCAGAAGCCAAAATGAGGTTGAAGGCTGCATTGACTCACCACCCTGCTGCCATGTCAAATGGGAACATGAACACCATGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCTCAGATGGTCCTCTGTaGGGAAGCGCTGGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCSDGPL*GSAGSS
Trigger: GCTGCTCCCAGCGCTTCCCAACAGAGGACCATCTGA...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357727.7
ENST00000396300.6
CDS-3UTR CAA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATGCTGAGATTTGGACCTaGCATCCCCATGATGCTGGA +
Preference number: 5 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADAEIWT*HPHDAG
Trigger: TCCAGCATCATGGGGATGCAAGGTCCAAATCTCAGC...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GGCCGTATAAAACCAGTCGCAATCCAAGGGTGTCATGTTATAGCCCCACATCAAGCCTTCAACCTCATTTaGGCTTCTGAATGCATTGGC +
Preference number: 5 (lower is better)
Translates to: GRIKPVAIQGCHVIAPHQAFNLI*ASECIG
Trigger: GCCAATGCATTCAGAAGCCAAAATGAGGTTGAAGGC...TTGATGTGGGGCTATAACATGACACCCTTGGATTGCGACTGGTTTTATACGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGAAACCTGTGCTTGGTaGCCGGTGTGCAGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: RTEESSRSELILKMPLKEETCAW*PVCRGG
Trigger: TCCGCCCCTGCACACCGGCAACCAAGCACAGGTTTC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTGAAACCTGTGCTTGGTaGCCGGTGTGCAGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFETCAW*PVCRGG
Trigger: TCCGCCCCTGCACACCGGCAACCAAGCACAGGTTTC...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAACGCTACAGCTCTTCTaGGAGGCCAGGTCTGATGGT +
Preference number: 5 (lower is better)
Translates to: SKNALKRKDAWYATALLGTLQLF*EARSDG
Trigger: ACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGT...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATTTGGATCTGTCTTACTaGACATCTAGGTATACCTCA +
Preference number: 5 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHLDLSY*TSRYTS
Trigger: TGAGGTATACCTAGATGTCAAGTAAGACAGATCCAA...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp GGCCGTATAAAACCAGTCGCAATCCAAGGGTGTCATGTTATAGCCCCACATCAATCCTGGCTTCGTGGATaGAGAAATGTGTCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GRIKPVAIQGCHVIAPHQSWLRG*RNVSRR
Trigger: TCTCCTTGACACATTTCTCAATCCACGAAGCCAGGA...TTGATGTGGGGCTATAACATGACACCCTTGGATTGCGACTGGTTTTATACGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp GAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCACACTCTTTAAGCAATTaGGCTACAAGCATTACATCA +
Preference number: 5 (lower is better)
Translates to: ERTHGTLQLFLEARSDGAHSLSN*ATSITS
Trigger: TGATGTAATGCTTGTAGCCAAATTGCTTAAAGAGTG...TGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCTCATATCCTTCCCATTaGATTCCAGGCCAAGCGATG +
Preference number: 5 (lower is better)
Translates to: KMPLKERTHGTLQLFLEASYPSH*IPGQAM
Trigger: CATCGCTTGGCCTGGAATCAAATGGGAAGGATATGA...GGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396298.6
CDS GCA 90 bp CACCAAGGCTCTGTAACAAACATCCTCAAAAAGAGAGGCAGTCTCTaGACTGCCTTTCATTCACCAAAACAAAGATGGAGCCCTCTACCT +
Preference number: 5 (lower is better)
Translates to: HQGSVTNILKKRGSL*TAFHSPKQRWSPLP
Trigger: AGGTAGAGGGCTCCATCTTTGTTTTGGTGAATGAAAGGCAGTGCAGAGACTGCCTCTCTTTTTGAGGATGTTTGTTACAGAGCCTTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468391.5
CDS-3UTR CAA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTACGTTGGTGTCATGGTaGGGCAGCCGAGCGCTGCTA +
Preference number: 5 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFTLVSW*GSRALL
Trigger: TAGCAGCGCTCGGCTGCCCAACCATGACACCAACGT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATGGCTGTCTCTGTCTGTaGTGGAGATGTAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDGCLCL*WRCSRE
Trigger: TTCTCTGCTACATCTCCACAACAGACAGAGACAGCC...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATGCTGCATCTGTTGTGTaGCTGGTGAAACCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADAASVV*LVKPVL
Trigger: AAGCACAGGTTTCACCAGCAACACAACAGATGCAGC...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGGCTGGGGTGGCTGTATaGTCTGGGTTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMAGVAV*SGLAAS
Trigger: AGATGCAGCCAACCCAGACAATACAGCCACCCCAGC...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGCTGGGGTGGCTGTATaGTCTGGGTTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCAGVAV*SGLAAS
Trigger: AGATGCAGCCAACCCAGACAATACAGCCACCCCAGC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GAAGAAAACTGGGCATTAGCAAGTGGACCAAGAGGAGGAGAGGTGAAGAGATGCTCTGCATGGCTGTTATaGGGCAGTCTTTATGTGTTA +
Preference number: 5 (lower is better)
Translates to: EENWALASGPRGGEVKRCSAWLL*GSLYVL
Trigger: TAACACATAAAGACTGCCCAATAACAGCCATGCAGA...GCATCTCTTCACCTCTCCTCCTCTTGGTCCACTTGCTAATGCCCAGTTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGATTATGCTGGATGACTaGTTGCTGGGAGCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEIMLDD*LLGASW
Trigger: CCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAAT...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp AGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATATTATGCTGGATGACTaGTTGCTGGGAGCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SNWYQKTGEKHQSVSQADIMLDD*LLGASW
Trigger: CCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAAT...ATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATTCCTACCCAGTTACCTaGGATCTGTCTTACTTGACA +
Preference number: 5 (lower is better)
Translates to: LKERTHGTLQLFLEARSDSYPVT*DLSYLT
Trigger: TGTCAAGTAAGACAGATCCAAGGTAACTGGGTAGGA...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp ACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATAGATTGATTATTCTGTaGTCTGGTGACGGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TGTRKLEKSTKAFPKLIDRLIIL*SGDGWA
Trigger: GGCCCAGCCGTCACCAGACAACAGAATAATCAATCT...ATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATGGTGCATGGCAACATTGTATTTTaGAGACCTAGGAATGAAATC +
Preference number: 5 (lower is better)
Translates to: KGRMVRYSSSWRPGLMVHGNIVF*RPRNEI
Trigger: GATTTCATTCCTAGGTCTCAAAAATACAATGTTGCC...ATGCACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGGAGAAGCACAGGGGTaGCTGAGATTTGGACCTTGC +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCGEAQG*LRFGPC
Trigger: GCAAGGTCCAAATCTCAGCAACCCCTGTGCTTCTCC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTGCTGGGGTGGCTGTATaGTCTGGGTTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFAGVAV*SGLAAS
Trigger: AGATGCAGCCAACCCAGACAATACAGCCACCCCAGC...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp TTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCCAGGTCTGATTCTGCATGGCTGTTATaGGGCAGTCTTTATGTGTTA +
Preference number: 5 (lower is better)
Translates to: LKERTHGTLQLFLEARSDSAWLL*GSLYVL
Trigger: TAACACATAAAGACTGCCCAATAACAGCCATGCAGA...ATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp ACACACACACACATTAAGAGGTCAAGCATTCAAATGGAGATGAAACACCAGCACATTATGCTGGATGACTaGTTGCTGGGAGCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: THTHIKRSSIQMEMKHQHIMLDD*LLGASW
Trigger: CCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAAT...GTGCTGGTGTTTCATCTCCATTTGAATGCTTGACCTCTTAATGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATACGCTACAGCTCTTCTaGGAGGCCAGGTCTGATGGT +
Preference number: 5 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYTLQLF*EARSDG
Trigger: ACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGT...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATACGCTACAGCTCTTCTaGGAGGCCAGGTCTGATGGT +
Preference number: 5 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINTLQLF*EARSDG
Trigger: ACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGT...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTCAGATGGTCCTCTGTaGGGAAGCGCCCTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINSDGPL*GSALLS
Trigger: AGACAGAAGGGCGCTTCCCAACAGAGGACCATCTGA...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409603.5
CDS-3UTR CAA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTAGGCGACGGCATGGCTaGCTGAATCACAACGTTGGT +
Preference number: 5 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVRRRHG*LNHNVG
Trigger: ACCAACGTTGTGATTCAGCAAGCCATGCCGTCGCCT...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAAGGCGACGGCATGGCTaGCTGAATCACAACGTTGGT +
Preference number: 5 (lower is better)
Translates to: RTEESSRSELILKMPLKERRRHG*LNHNVG
Trigger: ACCAACGTTGTGATTCAGCAAGCCATGCCGTCGCCT...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTGGCTGTCTCTGTCTGTaGTGGAGATGTAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGGCLCL*WRCSRE
Trigger: TTCTCTGCTACATCTCCACAACAGACAGAGACAGCC...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATAACATTTGTCGCTCCATaGGCATCAAGACGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLITFVAP*ASRRRK
Trigger: CTTCCGCCGTCTTGATGCCAATGGAGCGACAAATGT...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACATTTGTCGCTCCATaGGCATCAAGACGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: TTAQTQHELRCQKISYPVTFVAP*ASRRRK
Trigger: CTTCCGCCGTCTTGATGCCAATGGAGCGACAAATGT...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCACATTTGTCGCTCCATaGGCATCAAGACGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCTFVAP*ASRRRK
Trigger: CTTCCGCCGTCTTGATGCCAATGGAGCGACAAATGT...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATGCTGAGATTTGGACCTaGCATCCCCATGATGCTGGA +
Preference number: 5 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYAEIWT*HPHDAG
Trigger: TCCAGCATCATGGGGATGCAAGGTCCAAATCTCAGC...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp ACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTACCTTGGATCTGGCTGAGATTTGGACCTaGCATCCCCATGATGCTGGA +
Preference number: 5 (lower is better)
Translates to: TQHELRCQKISYPVTLDLAEIWT*HPHDAG
Trigger: TCCAGCATCATGGGGATGCAAGGTCCAAATCTCAGC...CAGATCCAAGGTAACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTGCTGAGATTTGGACCTaGCATCCCCATGATGCTGGA +
Preference number: 5 (lower is better)
Translates to: TTAQTQHELRCQKISYPVAEIWT*HPHDAG
Trigger: TCCAGCATCATGGGGATGCAAGGTCCAAATCTCAGC...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGGAGAAGCACAGGGGTaGCTGAGATTTGGACCTTGC +
Preference number: 5 (lower is better)
Translates to: RTEESSRSELILKMPLKEGEAQG*LRFGPC
Trigger: GCAAGGTCCAAATCTCAGCAACCCCTGTGCTTCTCC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTGGAGAAGCACAGGGGTaGCTGAGATTTGGACCTTGC +
Preference number: 5 (lower is better)
Translates to: NSGDTTAQTQHELRCQKIGEAQG*LRFGPC
Trigger: GCAAGGTCCAAATCTCAGCAACCCCTGTGCTTCTCC...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGCCTTCAACCTCATTTaGGCTTCTGAATGCATTGGC +
Preference number: 5 (lower is better)
Translates to: SKNALKRKDAWYATALLGAFNLI*ASECIG
Trigger: GCCAATGCATTCAGAAGCCAAAATGAGGTTGAAGGC...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTGTTCATGTTCCCATTaGACATGGCAGCAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGCSCSH*TWQQGG
Trigger: ACCACCCTGCTGCCATGTCAAATGGGAACATGAACA...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTATGCTGGATGACTTGTaGCTGGGAGCAAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFMLDDL*LGASWD
Trigger: GTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCAT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTATGCTGGATGACTTGTaGCTGGGAGCAAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: NSGDTTAQTQHELRCQKIMLDDL*LGASWD
Trigger: GTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCAT...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTACGCTACAGCTCTTCTaGGAGGCCAGGTCTGATGGT +
Preference number: 5 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFTLQLF*EARSDG
Trigger: ACCATCAGACCTGGCCTCCAAGAAGAGCTGTAGCGT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp ACACACACACACATTAAGAGGTCAAGCATTCAAATGGAGATGAAACACCAGCACGCCCCACATCAAAATTaGGACTTTCGCAATCAAGGC +
Preference number: 5 (lower is better)
Translates to: THTHIKRSSIQMEMKHQHAPHQN*DFRNQG
Trigger: GCCTTGATTGCGAAAGTCCAAATTTTGATGTGGGGC...GTGCTGGTGTTTCATCTCCATTTGAATGCTTGACCTCTTAATGTGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp GGCCGTATAAAACCAGTCGCAATCCAAGGGTGTCATGTTATAGCCCCACATCAAAGCCAAGTGTTGGATTaGACCAATGTATCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: GRIKPVAIQGCHVIAPHQSQVLD*TNVSFC
Trigger: ACAGAAAGATACATTGGTCAAATCCAACACTTGGCT...TTGATGTGGGGCTATAACATGACACCCTTGGATTGCGACTGGTTTTATACGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp ACAGTAGAATGGCTTGTTTCAAGGAGGCACGACTGTGGTTCAGGGACTATCTGCTTTTGCTTTGGTCCTTaGAATTCCACTGTATACACA +
Preference number: 5 (lower is better)
Translates to: TVEWLVSRRHDCGSGTICFCFGP*NSTVYT
Trigger: TGTGTATACAGTGGAATTCAAAGGACCAAAGCAAAA...GCAGATAGTCCCTGAACCACAGTCGTGCCTCCTTGAAACAAGCCATTCTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTACATTTGTCGCTCCATaGGCATCAAGACGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFTFVAP*ASRRRK
Trigger: CTTCCGCCGTCTTGATGCCAATGGAGCGACAAATGT...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGCTGAGATTTGGACCTaGCATCCCCATGATGCTGGA +
Preference number: 5 (lower is better)
Translates to: RTEESSRSELILKMPLKEAEIWT*HPHDAG
Trigger: TCCAGCATCATGGGGATGCAAGGTCCAAATCTCAGC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGTGTTCATGTTCCCATTaGACATGGCAGCAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMCSCSH*TWQQGG
Trigger: ACCACCCTGCTGCCATGTCAAATGGGAACATGAACA...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCTGTTCATGTTCCCATTaGACATGGCAGCAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCCSCSH*TWQQGG
Trigger: ACCACCCTGCTGCCATGTCAAATGGGAACATGAACA...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTGCTGCATCTGTTGTGTaGCTGGTGAAACCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: TTAQTQHELRCQKISYPVAASVV*LVKPVL
Trigger: AAGCACAGGTTTCACCAGCAACACAACAGATGCAGC...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGCTGTATTGTCTGGGTaGGCTGCATCTGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCAVLSG*AASVVL
Trigger: CAACACAACAGATGCAGCCAACCCAGACAATACAGC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp CAGTCAAACTGTCAAGTTGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACTGCTCCTACCCAGTTACCTaGGATCTGTCTTACTTGACA +
Preference number: 5 (lower is better)
Translates to: QSNCQVAERRKLRQVLNCSYPVT*DLSYLT
Trigger: TGTCAAGTAAGACAGATCCAAGGTAACTGGGTAGGA...GCAGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp CAGGCAAAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTATGTTGAGGCCGGTTaGCTAATGTGTGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: QAKGWTDKNETMAIYRKGYVEAG*LMCVVG
Trigger: ACCAACCACACACATTAGCAAACCGGCCTCAACATA...ACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTTTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTGTTCATGTTCCCATTaGACATGGCAGCAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: NSGDTTAQTQHELRCQKICSCSH*TWQQGG
Trigger: ACCACCCTGCTGCCATGTCAAATGGGAACATGAACA...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGCTGCATCTGTTGTGTaGCTGGTGAAACCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: RTEESSRSELILKMPLKEAASVV*LVKPVL
Trigger: AAGCACAGGTTTCACCAGCAACACAACAGATGCAGC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTGCTGTATTGTCTGGGTaGGCTGCATCTGTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVAVLSG*AASVVL
Trigger: CAACACAACAGATGCAGCCAACCCAGACAATACAGC...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTATTATGCTGGATGACTaGTTGCTGGGAGCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVIMLDD*LLGASW
Trigger: CCAGCTTGCTCCCAGCAACAAGTCATCCAGCATAAT...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp GTTTATAAACAAGTAACTGGTACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCAGGGACTATCTGCTTaGTATCACGGGCAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: VYKQVTGTRKLEKSTKAFQGLSA*YHGQVH
Trigger: GTGAACTTGCCCGTGATACAAAGCAGATAGTCCCTG...AAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGTACCAGTTACTTGTTTATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCACTGGTTTCTTGTTCTaGACAAACTCCAGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCTGFLF*TNSSSA
Trigger: AGCCGAGCTGGAGTTTGTCAAGAACAAGAAACCAGT...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409603.5
CDS-3UTR CAA 90 bp ATTGCTGCTGTGTCGTCTTATCCTACCTTAGATTATAATTGTGAAATAGAGGTGAAAAGCAGCAACGTGTaGCTTCCTGCAGTCACCAAA +
Preference number: 5 (lower is better)
Translates to: IAAVSSYPTLDYNCEIEVKSSNV*LPAVTK
Trigger: TTTGGTGACTGCAGGAAGCAACACGTTGCTGCTTTT...CACCTCTATTTCACAATTATAATCTAAGGTAGGATAAGACGACACAGCAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGCCTTCAACCTCATTTaGGCTTCTGAATGCATTGGC +
Preference number: 5 (lower is better)
Translates to: RTEESSRSELILKMPLKEAFNLI*ASECIG
Trigger: GCCAATGCATTCAGAAGCCAAAATGAGGTTGAAGGC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AATTCTGGTGACACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTGCCTTCAACCTCATTTaGGCTTCTGAATGCATTGGC +
Preference number: 5 (lower is better)
Translates to: NSGDTTAQTQHELRCQKIAFNLI*ASECIG
Trigger: GCCAATGCATTCAGAAGCCAAAATGAGGTTGAAGGC...AATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGTGTCACCAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTCCTACCCAGTTACCTaGGATCTGTCTTACTTGACA +
Preference number: 5 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINSYPVT*DLSYLT
Trigger: TGTCAAGTAAGACAGATCCAAGGTAACTGGGTAGGA...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp CTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAGGCTTGGTGGTATTATTaGGACATCAATGGATCTTAT +
Preference number: 5 (lower is better)
Translates to: LKMPLKERTHGTLQLFLEAWWYY*DINGSY
Trigger: ATAAGATCCATTGATGTCCAAATAATACCACCAAGC...CTCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp CCTTCTGAATTATTATGTAGTACATGGATTTTCAACGTTATAGGCAGGCCGTATCAGCACCTGCCTAGATaGCTAGAGAGAAACATTCAC +
Preference number: 5 (lower is better)
Translates to: PSELLCSTWIFNVIGRPYQHLPR*LERNIH
Trigger: GTGAATGTTTCTCTCTAGCAATCTAGGCAGGTGCTG...ATACGGCCTGCCTATAACGTTGAAAATCCATGTACTACATAATAATTCAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp CAGTCAAACTGTCAAGTTGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACTGCACTCAAAACCATCTTTaGAAAGCACTGCATACAAGG +
Preference number: 5 (lower is better)
Translates to: QSNCQVAERRKLRQVLNCTQNHL*KALHTR
Trigger: CCTTGTATGCAGTGCTTTCAAAAGATGGTTTTGAGT...GCAGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGAAGTCAAACTGTCAAGTaGCTGAACGAAGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: SKNALKRKDAWYATALLGSQTVK*LNEENS
Trigger: TGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACT...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp CAGTCAAACTGTCAAGTTGCTGAACGAAGAAAACTCAGGCAAGTTCTTAACTGCAAAAAGGTGAGTAGGTaGTATTTTCTACTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: QSNCQVAERRKLRQVLNCKKVSR*YFLLAA
Trigger: AGCAGCCAGTAGAAAATACAACCTACTCACCTTTTT...GCAGTTAAGAACTTGCCTGAGTTTTCTTCGTTCAGCAACTTGACAGTTTGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATAGTGACAGCACCTTTTaGGGACTTCCTCAGTTAACA +
Preference number: 5 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYSDSTF*GLPQLT
Trigger: TGTTAACTGAGGAAGTCCCAAAAAGGTGCTGTCACT...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS TCA 90 bp TTCATTAATACCACTTGCCAATCCAGTGCTTGTTACATGATTATCTaGCACCAAGGCTCTGTAACAAACATCCTCAAAAAGAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: FINTTCQSSACYMII*HQGSVTNILKKRGS
Trigger: ACTGCCTCTCTTTTTGAGGATGTTTGTTACAGAGCCTTGGTGTCAGATAATCATGTAACAAGCACTGGATTGGCAAGTGGTATTAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468391.5
CDS-3UTR CAA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTCTGCATGGCTGTTATaGGGCAGTCTTTATGTGTTA +
Preference number: 5 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINSAWLL*GSLYVL
Trigger: TAACACATAAAGACTGCCCAATAACAGCCATGCAGA...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000498316.3
CDS-3UTR CAA 90 bp CACCTCCATTTAAGTGACAGTTTACCTGATAGAAATGCTCTCAGGTGTACTTATGAGGTGAAGAGATGCTaGGTGGTATTATTTGGACAT +
Preference number: 5 (lower is better)
Translates to: HLHLSDSLPDRNALRCTYEVKRC*VVLFGH
Trigger: ATGTCCAAATAATACCACCAAGCATCTCTTCACCTC...ATAAGTACACCTGAGAGCATTTCTATCAGGTAAACTGTCACTTAAATGGAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTGAGGTGAAGAGATGCTaGGTGGTATTATTTGGACAT +
Preference number: 5 (lower is better)
Translates to: TTAQTQHELRCQKISYPVEVKRC*VVLFGH
Trigger: ATGTCCAAATAATACCACCAAGCATCTCTTCACCTC...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp TCTAAAAATGCCCTTAAAAGAAAGGACGCATGGTACGCTACAGCTCTTCTTGGATCAAATTTAAATGGGTaGTTTCCTTTCCCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: SKNALKRKDAWYATALLGSNLNG*FPFPSQ
Trigger: CTGAGAAGGGAAAGGAAACAACCCATTTAAATTTGA...TCCAAGAAGAGCTGTAGCGTACCATGCGTCCTTTCTTTTAAGGGCATTTTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATATCAGGACACTTTGGTTaGGAAGGTGAGAGAAAATTC +
Preference number: 5 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLISGHFG*EGERKF
Trigger: GAATTTTCTCTCACCTTCCAAACCAAAGTGTCCTGA...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGAATGTGACTAAAAATTaGTGGAACTGTCTAGCCTCC +
Preference number: 5 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMNVTKN*WNCLAS
Trigger: GGAGGCTAGACAGTTCCACAAATTTTTAGTCACATT...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp AAGGGTTGGACTGATAAGAATGAAACCATGGCTATATACAGAAAAGGTTCAGTTTCTGCATGGCTGTTATaGGGCAGTCTTTATGTGTTA +
Preference number: 5 (lower is better)
Translates to: KGWTDKNETMAIYRKGSVSAWLL*GSLYVL
Trigger: TAACACATAAAGACTGCCCAATAACAGCCATGCAGA...AACTGAACCTTTTCTGTATATAGCCATGGTTTCATTCTTATCAGTCCAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCTTGGATCTGTCTTACTaGACATCTAGGTATACCTCA +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCLDLSY*TSRYTS
Trigger: TGAGGTATACCTAGATGTCAAGTAAGACAGATCCAA...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGTTGGATCTGTCTTACTaGACATCTAGGTATACCTCA +
Preference number: 5 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMLDLSY*TSRYTS
Trigger: TGAGGTATACCTAGATGTCAAGTAAGACAGATCCAA...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp AGGAGAGGTGAAGAGATGCTTGGTGGTATTATTTGGACATCAATGGATCTTATATTGGATCTGTCTTACTaGACATCTAGGTATACCTCA +
Preference number: 5 (lower is better)
Translates to: RRGEEMLGGIIWTSMDLILDLSY*TSRYTS
Trigger: TGAGGTATACCTAGATGTCAAGTAAGACAGATCCAA...TATAAGATCCATTGATGTCCAAATAATACCACCAAGCATCTCTTCACCTCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp AGAACTGAGGAGTCTTCCAGGTCTGAGTTAATTCTAAAAATGCCCTTAAAAGAAGAGGTGAAGAGATGCTaGGTGGTATTATTTGGACAT +
Preference number: 5 (lower is better)
Translates to: RTEESSRSELILKMPLKEEVKRC*VVLFGH
Trigger: ATGTCCAAATAATACCACCAAGCATCTCTTCACCTC...TTCTTTTAAGGGCATTTTTAGAATTAACTCAGACCTGGAAGACTCCTCAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTTATAATCCCAACACTTaGGGAGGAAGAAGTAGGATA +
Preference number: 5 (lower is better)
Translates to: TTAQTQHELRCQKISYPVYNPNT*GGRSRI
Trigger: TATCCTACTTCTTCCTCCCAAAGTGTTGGGATTATA...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp ACCACAGCACAAACTCAACATGAGTTAAGATGTCAAAAGATTTCCTACCCAGTTGGATTTTCAGGCAGATaGATTATTCTGTTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: TTAQTQHELRCQKISYPVGFSGR*IILLSG
Trigger: ACCAGACAACAGAATAATCAATCTGCCTGAAAATCC...AACTGGGTAGGAAATCTTTTGACATCTTAACTCATGTTGAGTTTGTGCTGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp ACCAGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATGCTTGGTGGTATTATTaGGACATCAATGGATCTTAT +
Preference number: 5 (lower is better)
Translates to: TRKLEKSTKAFPKLIDINAWWYY*DINGSY
Trigger: ATAAGATCCATTGATGTCCAAATAATACCACCAAGC...ATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp AGAAAACTGGAGAAAAGCACCAAAGCGTTTCCCAAGCTGATAGATATTAATTGCGCTTGGTGGTATTATTaGGACATCAATGGATCTTAT +
Preference number: 5 (lower is better)
Translates to: RKLEKSTKAFPKLIDINCAWWYY*DINGSY
Trigger: ATAAGATCCATTGATGTCCAAATAATACCACCAAGC...GCAATTAATATCTATCAGCTTGGGAAACGCTTTGGTGCTTTTCTCCAGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
CDS-3UTR CAA 90 bp CTGTGGTTTAACAAGATTCAATGTTTCAGGCAAAGGGTTGGACTGATAAGAATGTTGATAAGCCAAGTGTaGGATTTGACCAATGTATCT +
Preference number: 5 (lower is better)
Translates to: LWFNKIQCFRQRVGLIRMLISQV*DLTNVS
Trigger: AGATACATTGGTCAAATCCAACACTTGGCTTATCAA...CATTCTTATCAGTCCAACCCTTTGCCTGAAACATTGAATCTTGTTAAACCACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS-3UTR CAA 90 bp CCTTCTGAATTATTATGTAGTACATGGATTTTCAACGTTATAGGCAGGCCGTATATAAGTCTTGAGTATTaGCCTCAGTATTTCAGACCA +
Preference number: 5 (lower is better)
Translates to: PSELLCSTWIFNVIGRPYISLEY*PQYFRP
Trigger: TGGTCTGAAATACTGAGGCAAATACTCAAGACTTAT...ATACGGCCTGCCTATAACGTTGAAAATCCATGTACTACATAATAATTCAGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357727.7
CDS GCA 72 bp CGCTGCAGCCGGCAGCCCGGCGGGAGAGGTGGCAGCTaGAGCTCCGCACCGGGGAGAGCGAGCCCCCTGCGC +
Preference number: 6 (lower is better)
Translates to: RCSRQPGGRGGS*SSAPGRASPLR
Trigger: GCGCAGGGGGCTCGCTCTCCCCGGTGCGGAGCTGCAGCTGCCACCTCTCCCGCCGGGCTGCCGGCTGCAGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CCA 72 bp GCCCACCCGCTGCAGCCGGCAGCCCGGCGGGAGAGGTaGCAGCTGCAGCTCCGCACCGGGGAGAGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: AHPLQPAARRER*QLQLRTGESEP
Trigger: GGGCTCGCTCTCCCCGGTGCGGAGCTGCAGCTGCCACCTCTCCCGCCGGGCTGCCGGCTGCAGCGGGTGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CCA 72 bp AAGCAGCGGAGGCAGGAGGCGGCCGGAGGAGTGGACTaGAGCGGACGGAGCCTCGCCGCTCTCCAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: KQRRQEAAGGVD*SGRSLAALQPG
Trigger: TCCGGGCTGGAGAGCGGCGAGGCTCCGTCCGCTCCAGTCCACTCCTCCGGCCGCCTCCTGCCTCCGCTGCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS GCA 72 bp GGTGACCCGGCGTCCTCGCCGCGCCCGCTGGAAGTTTaGAAACTTTCTCCGGGGGTTCCGCCGCCACGCTGG +
Preference number: 6 (lower is better)
Translates to: GDPASSPRPLEV*KLSPGVPPPRW
Trigger: CCAGCGTGGCGGCGGAACCCCCGGAGAAAGTTTGCAAACTTCCAGCGGGCGCGGCGAGGACGCCGGGTCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS GCA 72 bp CCGCAGGGGGAGACTCCGCCGCCAGGTCTTGGGAATTaGCTGGGCGCCGCCAAAGCTCGAGCCGGAGCTGTC +
Preference number: 6 (lower is better)
Translates to: PQGETPPPGLGN*LGAAKARAGAV
Trigger: GACAGCTCCGGCTCGAGCTTTGGCGGCGCCCAGGCAATTCCCAAGACCTGGCGGCGGAGTCTCCCCCTGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CCA 72 bp CAAGAAAGCAGCGGAGGCAGGAGGCGGCCGGAGGAGTaGACTGGAGCGGACGGAGCCTCGCCGCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: QESSGGRRRPEE*TGADGASPLSS
Trigger: GCTGGAGAGCGGCGAGGCTCCGTCCGCTCCAGTCCACTCCTCCGGCCGCCTCCTGCCTCCGCTGCTTTCTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CAA 72 bp GCCGCAGGGGGAGACTCCGCCGCCAGGTCTTGGGAATaGCCTGGGCGCCGCCAAAGCTCGAGCCGGAGCTGT +
Preference number: 6 (lower is better)
Translates to: AAGGDSAARSWE*PGRRQSSSRSC
Trigger: ACAGCTCCGGCTCGAGCTTTGGCGGCGCCCAGGCAATTCCCAAGACCTGGCGGCGGAGTCTCCCCCTGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CCA 72 bp GAATCTGCCGCAGGGGGAGACTCCGCCGCCAGGTCTTaGGAATTGCCTGGGCGCCGCCAAAGCTCGAGCCGG +
Preference number: 6 (lower is better)
Translates to: ESAAGGDSAARS*ELPGRRQSSSR
Trigger: CCGGCTCGAGCTTTGGCGGCGCCCAGGCAATTCCCAAGACCTGGCGGCGGAGTCTCCCCCTGCGGCAGATTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CAA 72 bp CCTGGGCGCCGCCAAAGCTCGAGCCGGAGCTGTCATTaGGGGCAGCGGCCGGGAAGAGGTAACGATGCCAGC +
Preference number: 6 (lower is better)
Translates to: PGRRQSSSRSCH*GQRPGRGNDAS
Trigger: GCTGGCATCGTTACCTCTTCCCGGCCGCTGCCCCAAATGACAGCTCCGGCTCGAGCTTTGGCGGCGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CAA 72 bp AGAATCTGCCGCAGGGGGAGACTCCGCCGCCAGGTCTaGGGAATTGCCTGGGCGCCGCCAAAGCTCGAGCCG +
Preference number: 6 (lower is better)
Translates to: RICRRGRLRRQV*GIAWAPPKLEP
Trigger: CGGCTCGAGCTTTGGCGGCGCCCAGGCAATTCCCAAGACCTGGCGGCGGAGTCTCCCCCTGCGGCAGATTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CAA 90 bp CGAGAATCTGCCGCAGGGGGAGACTCCGCCGCCAGGTCTTGGGAATaGCCTGGGCGCCGCCAAAGCTCGAGCCGGAGCTGTCATTTGGGG +
Preference number: 6 (lower is better)
Translates to: RESAAGGDSAARSWE*PGRRQSSSRSCHLG
Trigger: CCCCAAATGACAGCTCCGGCTCGAGCTTTGGCGGCGCCCAGGCAATTCCCAAGACCTGGCGGCGGAGTCTCCCCCTGCGGCAGATTCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CCA 72 bp CTGGGCGCCGCCAAAGCTCGAGCCGGAGCTGTCATTTaGGGCAGCGGCCGGGAAGAGGTAACGATGCCAGCA +
Preference number: 6 (lower is better)
Translates to: LGAAKARAGAVI*GSGREEVTMPA
Trigger: TGCTGGCATCGTTACCTCTTCCCGGCCGCTGCCCCAAATGACAGCTCCGGCTCGAGCTTTGGCGGCGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CCA 72 bp GCGCTCCGGCACTCACGCGGCGCGGGGTCTCTAGGGTaGCCTCAGGACACAGCCGAATTCCACAGTCTACCA +
Preference number: 6 (lower is better)
Translates to: ALRHSRGAGSLG*PQDTAEFHSLP
Trigger: TGGTAGACTGTGGAATTCGGCTGTGTCCTGAGGCCACCCTAGAGACCCCGCGCCGCGTGAGTGCCGGAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS CAA 90 bp ATTCTGCCGAGAATCTGCCGCAGGGGGAGACTCCGCCGCCAGGTCTaGGGAATTGCCTGGGCGCCGCCAAAGCTCGAGCCGGAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ILPRICRRGRLRRQV*GIAWAPPKLEPELS
Trigger: TGACAGCTCCGGCTCGAGCTTTGGCGGCGCCCAGGCAATTCCCAAGACCTGGCGGCGGAGTCTCCCCCTGCGGCAGATTCTCGGCAGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS TCA 72 bp GTGTCATGGTTGGGCAGCCGAGCGCTGCTAAGCTGGTaGGTTCCGGGCCCCGTCATGGCCCCACCAACTGCA +
Preference number: 6 (lower is better)
Translates to: VSWLGSRALLSW*VPGPVMAPPTA
Trigger: TGCAGTTGGTGGGGCCATGACGGGGCCCGGAACTCACCAGCTTAGCAGCGCTCGGCTGCCCAACCATGACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS CCA 72 bp AGGGGGAGACTCCGCCGCCAGGTCTTGGGAATTGCCTaGGCGCCGCCAAAGCTCGAGCCGGAGCTGTCATTT +
Preference number: 6 (lower is better)
Translates to: RGRLRRQVLGIA*APPKLEPELSF
Trigger: AAATGACAGCTCCGGCTCGAGCTTTGGCGGCGCCCAGGCAATTCCCAAGACCTGGCGGCGGAGTCTCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS CAA 72 bp CTGCCGCTTGACCGCACTTCTGGAGGGCTCCGCACCTaGCCAGGTCTCTGGAGGCAAACACACACCCCCGAT +
Preference number: 6 (lower is better)
Translates to: LPLDRTSGGLRT*PGLWRQTHTPD
Trigger: ATCGGGGGTGTGTGTTTGCCTCCAGAGACCTGGCAAGGTGCGGAGCCCTCCAGAAGTGCGGTCAAGCGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS CAA 90 bp TGGGAATTGCCTGGGCGCCGCCAAAGCTCGAGCCGGAGCTGTCATTaGGGGCAGCGGCCGGGAAGAGGTAACGATGCCAGCAAGAAAGCA +
Preference number: 6 (lower is better)
Translates to: WELPGRRQSSSRSCH*GQRPGRGNDASKKA
Trigger: TGCTTTCTTGCTGGCATCGTTACCTCTTCCCGGCCGCTGCCCCAAATGACAGCTCCGGCTCGAGCTTTGGCGGCGCCCAGGCAATTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478078.1
ENST00000482692.1
CDS TCA 72 bp CGAAATATACAAGTAGCCCGCTCCAGTCCCCGGCCTTaGGCAAGCATCAAGTGGGGGCGGCACCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RNIQVARSSPRP*ASIKWGRHRSR
Trigger: CCTGGACCGGTGCCGCCCCCACTTGATGCTTGCTCAAGGCCGGGGACTGGAGCGGGCTACTTGTATATTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS GCA 72 bp GGTGTGCAGGGGCGGATGTGGCGAGGTCTGGTGATGTaGTGGGTGTGCATGAAGGTGGGAATGGGAGTGGTG +
Preference number: 6 (lower is better)
Translates to: GVQGRMWRGLVM*WVCMKVGMGVV
Trigger: CACCACTCCCATTCCCACCTTCATGCACACCCAGCACATCACCAGACCTCGCCACATCCGCCCCTGCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS GCA 72 bp CCAGACCTTCCTCTTCTGTCTGCAGCGGGTGGCAGCTaGCCGGTTCCGTTCCAGAAATTTCCGCCGCCTCTC +
Preference number: 6 (lower is better)
Translates to: PDLPLLSAAGGS*PVPFQKFPPPL
Trigger: GAGAGGCGGCGGAAATTTCTGGAACGGAACCGGGCAGCTGCCACCCGCTGCAGACAGAAGAGGAAGGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS GCA 72 bp TGCCGCTTGACCGCACTTCTGGAGGGCTCCGCACCTTaGCAGGTCTCTGGAGGCAAACACACACCCCCGATT +
Preference number: 6 (lower is better)
Translates to: CRLTALLEGSAP*QVSGGKHTPPI
Trigger: AATCGGGGGTGTGTGTTTGCCTCCAGAGACCTGGCAAGGTGCGGAGCCCTCCAGAAGTGCGGTCAAGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS CCA 72 bp CTGGTGCTGATGCGGGTGCGAGTGCATGTGATGGTGTaGCGTCTGGTCCTGCCGGGAGCCCATCATCTCCAT +
Preference number: 6 (lower is better)
Translates to: LVLMRVRVHVMV*RLVLPGAHHLH
Trigger: ATGGAGATGATGGGCTCCCGGCAGGACCAGACGCCACACCATCACATGCACTCGCACCCGCATCAGCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS CAA 72 bp ACGAAATATACAAGTAGCCCGCTCCAGTCCCCGGCCTaGAGCAAGCATCAAGTGGGGGCGGCACCGGTCCAG +
Preference number: 6 (lower is better)
Translates to: TKYTSSPLQSPA*SKHQVGAAPVQ
Trigger: CTGGACCGGTGCCGCCCCCACTTGATGCTTGCTCAAGGCCGGGGACTGGAGCGGGCTACTTGTATATTTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS CAA 90 bp AGACTGACAACGAAATATACAAGTAGCCCGCTCCAGTCCCCGGCCTaGAGCAAGCATCAAGTGGGGGCGGCACCGGTCCAGGGAAAGTTG +
Preference number: 6 (lower is better)
Translates to: RLTTKYTSSPLQSPA*SKHQVGAAPVQGKL
Trigger: CAACTTTCCCTGGACCGGTGCCGCCCCCACTTGATGCTTGCTCAAGGCCGGGGACTGGAGCGGGCTACTTGTATATTTCGTTGTCAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS GCA 72 bp GTTCCGGGCCCCGTCATGGCCCCACCAACTGCATTATaGATCGAGATATTCCGCTTGCTGCTCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: VPGPVMAPPTAL*IEIFRLLLSSS
Trigger: GGAAGAGGAGAGCAGCAAGCGGAATATCTCGATGCATAATGCAGTTGGTGGGGCCATGACGGGGCCCGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000424599.5
CDS GCA 72 bp CTGGTGAGTTCCGGGCCCCGTCATGGCCCCACCAACTaGATTATGCATCGAGATATTCCGCTTGCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: LVSSGPRHGPTN*IMHRDIPLAAL
Trigger: GAGAGCAGCAAGCGGAATATCTCGATGCATAATGCAGTTGGTGGGGCCATGACGGGGCCCGGAACTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000424599.5
CDS CCA 72 bp TTGTCGCTCCATTGGCATCAAGACGGCGGAAGATCCTaGCATTGTAGGGTTGGGCAGGGTCCCAGGCATGGA +
Preference number: 6 (lower is better)
Translates to: LSLHWHQDGGRS*HCRVGQGPRHG
Trigger: TCCATGCCTGGGACCCTGCCCAACCCTACAATGCCAGGATCTTCCGCCGTCTTGATGCCAATGGAGCGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
ENST00000461921.5
ENST00000468391.5
ENST00000484383.1
CDS GCA 72 bp CCTGTGGGCTGGGGTGGCTGTATTGTCTGGGTTGGCTaGATCTGTTGTGTTGCTGGTGAAACCTGTGCTTGG +
Preference number: 6 (lower is better)
Translates to: PVGWGGCIVWVG*ICCVAGETCAW
Trigger: CCAAGCACAGGTTTCACCAGCAACACAACAGATGCAGCCAACCCAGACAATACAGCCACCCCAGCCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS GCA 72 bp TTTCCAATGACATCACCCAGACCTTCCTCTTCTGTCTaGAGCGGGTGGCAGCTGCCCGGTTCCGTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: FPMTSPRPSSSV*SGWQLPGSVPE
Trigger: TTCTGGAACGGAACCGGGCAGCTGCCACCCGCTGCAGACAGAAGAGGAAGGTCTGGGTGATGTCATTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS CCA 72 bp CCTGCCGGGAGCCCATCATCTCCATCATGTGTCCCATaGTGTTCATGTTCCCATTTGACATGGCAGCAGGGT +
Preference number: 6 (lower is better)
Translates to: PAGSPSSPSCVP*CSCSHLTWQQG
Trigger: ACCCTGCTGCCATGTCAAATGGGAACATGAACACCATGGGACACATGATGGAGATGATGGGCTCCCGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS CAA 72 bp AGTGATGACAGAGCTGGACTGAGGCGACGGCATGGCTaGCTGAATCACAACGTTGGTGTCATGGTTGGGCAG +
Preference number: 6 (lower is better)
Translates to: SDDRAGLRRRHG*LNHNVGVMVGQ
Trigger: CTGCCCAACCATGACACCAACGTTGTGATTCAGCAAGCCATGCCGTCGCCTCAGTCCAGCTCTGTCATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
CDS TCA 72 bp CAAACAAGTGTGGAGAAGGCAAGAGCGGAGCCCGGGTaGAGGGACCACGTTGGACTGAGCAAAGATTACAAT +
Preference number: 6 (lower is better)
Translates to: QTSVEKARAEPG*RDHVGLSKDYN
Trigger: ATTGTAATCTTTGCTCAGTCCAACGTGGTCCCTTCACCCGGGCTCCGCTCTTGCCTTCTCCACACTTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469531.1
CDS CAA 90 bp AGCCCATCATCTCCATCATGTGTCCCATGGTGTTCATGTTCCCATTaGACATGGCAGCAGGGTGGTGAGTCAATGCAGCCTTCAACCTCA +
Preference number: 6 (lower is better)
Translates to: SPSSPSCVPWCSCSH*TWQQGGESMQPSTS
Trigger: TGAGGTTGAAGGCTGCATTGACTCACCACCCTGCTGCCATGTCAAATGGGAACATGAACACCATGGGACACATGATGGAGATGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS TCA 72 bp CTCCATCATGTGTCCCATGGTGTTCATGTTCCCATTTaGCATGGCAGCAGGGTGGTGAGTCAATGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: LHHVSHGVHVPI*HGSRVVSQCSL
Trigger: AAGGCTGCATTGACTCACCACCCTGCTGCCATGTCAAATGGGAACATGAACACCATGGGACACATGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS CAA 72 bp TCTCCATCATGTGTCCCATGGTGTTCATGTTCCCATTaGACATGGCAGCAGGGTGGTGAGTCAATGCAGCCT +
Preference number: 6 (lower is better)
Translates to: SPSCVPWCSCSH*TWQQGGESMQP
Trigger: AGGCTGCATTGACTCACCACCCTGCTGCCATGTCAAATGGGAACATGAACACCATGGGACACATGATGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS CAA 72 bp AGAAGCGGGATGCAGCTGCTGAGAGAAAACATCTCCTaGGTTCCTTCCTTCGCATCTTGCCCCTCTAAGAAC +
Preference number: 6 (lower is better)
Translates to: RSGMQLLRENIS*VPSFASCPSKN
Trigger: GTTCTTAGAGGGGCAAGATGCGAAGGAAGGAACCAAGGAGATGTTTTCTCTCAGCAGCTGCATCCCGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS CCA 72 bp ATGTTTGTGCCTATGAATCATCAGATGGTCCTCTGTTaGGAAGCGCTTACTGGACCTCCAGAAACAGGGACG +
Preference number: 6 (lower is better)
Translates to: MFVPMNHQMVLC*EALTGPPETGT
Trigger: CGTCCCTGTTTCTGGAGGTCCAGTAAGCGCTTCCCAACAGAGGACCATCTGATGATTCATAGGCACAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396299.6
CDS CAA 72 bp CATGTTTGTGCCTATGAATCATCAGATGGTCCTCTGTaGGGAAGCGCTTACTGGACCTCCAGAAACAGGGAC +
Preference number: 6 (lower is better)
Translates to: HVCAYESSDGPL*GSAYWTSRNRD
Trigger: GTCCCTGTTTCTGGAGGTCCAGTAAGCGCTTCCCAACAGAGGACCATCTGATGATTCATAGGCACAAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396299.6
CDS CAA 90 bp TGGCAAAGAAGAAGCGGGATGCAGCTGCTGAGAGAAAACATCTCCTaGGTTCCTTCCTTCGCATCTTGCCCCTCTAAGAACTTCGTGAAA +
Preference number: 6 (lower is better)
Translates to: WQRRSGMQLLRENIS*VPSFASCPSKNFVK
Trigger: TTTCACGAAGTTCTTAGAGGGGCAAGATGCGAAGGAAGGAACCAAGGAGATGTTTTCTCTCAGCAGCTGCATCCCGCTTCTTCTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS TCA 72 bp GTGTTCATGTTCCCATTTGACATGGCAGCAGGGTGGTaGGTCAATGCAGCCTTCAACCTCATTTTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: VFMFPFDMAAGW*VNAAFNLILAS
Trigger: AGAAGCCAAAATGAGGTTGAAGGCTGCATTGACTCACCACCCTGCTGCCATGTCAAATGGGAACATGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357727.7
ENST00000396298.6
ENST00000396299.6
ENST00000396300.6
ENST00000409603.5
ENST00000426500.5
CDS TCA 72 bp TTCCTTCCTTCGCATCTTGCCCCTCTAAGAACTTCGTaGAAAGTTCAAGTGATTCTGCCGAGAATCTGCCGC +
Preference number: 6 (lower is better)
Translates to: FLPSHLAPLRTS*KVQVILPRICR
Trigger: GCGGCAGATTCTCGGCAGAATCACTTGAACTTTTCACGAAGTTCTTAGAGGGGCAAGATGCGAAGGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482692.1
CDS CCA 72 bp GAAGGCAAGAGCGGAGCCCGGGTGAAGGGACCACGTTaGACTGAGCAAAGATTACAATACATTCTATTTAGA +
Preference number: 6 (lower is better)
Translates to: EGKSGARVKGPR*TEQRLQYILFR
Trigger: TCTAAATAGAATGTATTGTAATCTTTGCTCAGTCCAACGTGGTCCCTTCACCCGGGCTCCGCTCTTGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469531.1
CDS CAA 90 bp ATGGACGCATGGGATTTTCTGAGTCACCAGAAGCTCTTTGTAAGATaGCAAATGCATCCAGAAGGAAGAACTCTGTCTTGGCATGGCGGG +
Preference number: 6 (lower is better)
Translates to: MDAWDFLSHQKLFVR*QMHPEGRTLSWHGG
Trigger: CCCGCCATGCCAAGACAGAGTTCTTCCTTCTGGATGCATTTGCAATCTTACAAAGAGCTTCTGGTGACTCAGAAAATCCCATGCGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484383.1
CDS CCA 72 bp CACCTACACATGGTTGATACATGCCAACTCCTGACATaGGAATTTTCGGAAGCACACCAAAGTCTCTGTGTG +
Preference number: 6 (lower is better)
Translates to: HLHMVDTCQLLT*EFSEAHQSLCV
Trigger: CACACAGAGACTTTGGTGTGCTTCCGAAAATTCCCATGTCAGGAGTTGGCATGTATCAACCATGTGTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484383.1
CDS TCA 72 bp ACACACACCTACACATGGTTGATACATGCCAACTCCTaGCATGGGAATTTTCGGAAGCACACCAAAGTCTCT +
Preference number: 6 (lower is better)
Translates to: THTYTWLIHANS*HGNFRKHTKVS
Trigger: AGAGACTTTGGTGTGCTTCCGAAAATTCCCATGTCAGGAGTTGGCATGTATCAACCATGTGTAGGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484383.1
CDS CCA 72 bp TTCCAGTTTATCCACTGGTTTAGTCATTCCCCTGAGTaGGATGCAAAGATCAAGTCAAATTCCCTTCCAGCG +
Preference number: 6 (lower is better)
Translates to: FQFIHWFSHSPE*DAKIKSNSLPA
Trigger: CGCTGGAAGGGAATTTGACTTGATCTTTGCATCCCACTCAGGGGAATGACTAAACCAGTGGATAAACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469531.1
CDS TCA 72 bp GAAGGAAACTTCAAAGTCATTTCATGTTTGTGCCTATaGATCATCAGATGGTCCTCTGTTGGGAAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: EGNFKVISCLCL*IIRWSSVGKRW
Trigger: CCAGCGCTTCCCAACAGAGGACCATCTGATGATTCATAGGCACAAACATGAAATGACTTTGAAGTTTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357727.7
ENST00000396300.6
ENST00000424599.5
ENST00000469531.1
CDS TCA 72 bp GAAGGAAACTTCAAAGTCATTTCATGTTTGTGCCTATaGATCATCAGATGGTCCTCTGTTGGGAAGCGCCCT +
Preference number: 6 (lower is better)
Translates to: EGNFKVISCLCL*IIRWSSVGKRP
Trigger: AGGGCGCTTCCCAACAGAGGACCATCTGATGATTCATAGGCACAAACATGAAATGACTTTGAAGTTTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409603.5
CDS GCA 72 bp AACAAACATCCTCAAAAAGAGAGGCAGTCTCTGCACTaGCTTTCATTCACCAAAACAAAGATGGAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: NKHPQKERQSLH*LSFTKTKMEPS
Trigger: AGAGGGCTCCATCTTTGTTTTGGTGAATGAAAGGCAGTGCAGAGACTGCCTCTCTTTTTGAGGATGTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468391.5
CDS CCA 72 bp GCAAATGCATCCAGAAGGAAGAACTCTGTCTTGGCATaGCGGGTATTTCACAACAACATTTTGGCTTCTGAA +
Preference number: 6 (lower is better)
Translates to: ANASRRKNSVLA*RVFHNNILASE
Trigger: TTCAGAAGCCAAAATGTTGTTGTGAAATACCCGCCATGCCAAGACAGAGTTCTTCCTTCTGGATGCATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484383.1
CDS CAA 90 bp GCTCTTTGTAAGATTGCAAATGCATCCAGAAGGAAGAACTCTGTCTaGGCATGGCGGGTATTTCACAACAACATTTTGGCTTCTGAATGC +
Preference number: 6 (lower is better)
Translates to: ALCKIANASRRKNSV*AWRVFHNNILASEC
Trigger: GCATTCAGAAGCCAAAATGTTGTTGTGAAATACCCGCCATGCCAAGACAGAGTTCTTCCTTCTGGATGCATTTGCAATCTTACAAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484383.1
CDS TCA 72 bp GAAGGAAACTTCAAAGTCATTTCATGTTTGTGCCTATaGATCATCAGATGGTCCTCTGTTGGGAAGCGCTTA +
Preference number: 6 (lower is better)
Translates to: EGNFKVISCLCL*IIRWSSVGKRL
Trigger: TAAGCGCTTCCCAACAGAGGACCATCTGATGATTCATAGGCACAAACATGAAATGACTTTGAAGTTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396299.6
CDS TCA 72 bp ATTCATCTTGGATTCCTCATAAATTGGCCTGCAGAATaGCGTAATGGACCTGTATCCAGTCTTTATTCTTTC +
Preference number: 6 (lower is better)
Translates to: IHLGFLINWPAE*RNGPVSSLYSF
Trigger: GAAAGAATAAAGACTGGATACAGGTCCATTACGTCATTCTGCAGGCCAATTTATGAGGAATCCAAGATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424599.5
CDS CCA 72 bp TTATTATTTCACATGCTGAGCAAATATATACACGCTTaGGTATATCCTACCCCAACTTGTATGGATCTACCA +
Preference number: 6 (lower is better)
Translates to: LLFHMLSKYIHA*VYPTPTCMDLP
Trigger: TGGTAGATCCATACAAGTTGGGGTAGGATATACCCAAGCGTGTATATATTTGCTCAGCATGTGAAATAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468391.5
CDS CAA 72 bp CAAATATATACACGCTTGGGTATATCCTACCCCAACTaGTATGGATCTACCAAAACTCCTAAATGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: QIYTRLGISYPN*YGSTKTPKCSF
Trigger: AAAGGAACATTTAGGAGTTTTGGTAGATCCATACAAGTTGGGGTAGGATATACCCAAGCGTGTATATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468391.5
CDS CAA 72 bp TTTATTATTTCACATGCTGAGCAAATATATACACGCTaGGGTATATCCTACCCCAACTTGTATGGATCTACC +
Preference number: 6 (lower is better)
Translates to: FIISHAEQIYTR*GISYPNLYGST
Trigger: GGTAGATCCATACAAGTTGGGGTAGGATATACCCAAGCGTGTATATATTTGCTCAGCATGTGAAATAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468391.5