RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CREB3L4 (Homo sapiens)

Ensembl gene IDs: ENSG00000143578

Ensembl transcript IDs: ENST00000271889.8, ENST00000368600.7, ENST00000368601.5, ENST00000368603.5, ENST00000368607.8, ENST00000431292.1, ENST00000449724.5, ENST00000461688.5, ENST00000468845.1, ENST00000473340.1, ENST00000477617.5, ENST00000479010.1, ENST00000492729.1

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGTTACGGATTTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTaGCTTGGAGGCCCAGGATGTGTGAGTCCTGGGTCCTTCACCTGC +
Preference number: 1 (lower is better)
Translates to: LVTDFPPDLLEDPLL*LGGPGCVSPGSFTC
Trigger: GCAGGTGAAGGACCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAAATCCGTAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR TCA 90 bp CAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTaGCTGCTTGTTACGGATTTTCCTCCTGACCTTCTTGAGGACCCT +
Preference number: 1 (lower is better)
Translates to: QPINVLLLPPPTVLS*LLVTDFPPDLLEDP
Trigger: AGGGTCCTCAAGAAGGTCAGGAGGAAAATCCGTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR CCA 90 bp CAGGCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTaGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAG +
Preference number: 1 (lower is better)
Translates to: QAETKGHLLGCPEVI*TPEGRHLSRNPSGK
Trigger: CTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
3UTR-3UTR GCA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTCCTGGGTCCTTCACCTaGCCCCAACTCCCCAATGCT +
Preference number: 2 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCPGSFT*PQLPNA
Trigger: AGCATTGGGGAGTTGGGGGCAGGTGAAGGACCCAGG...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR-3UTR CCA 90 bp GCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTCCCTCTCCTCTGCCTTaGAGGCCCAGGATGTGTGAG +
Preference number: 2 (lower is better)
Translates to: AHQCTPSSAADCPELTACPSPLP*RPRMCE
Trigger: CTCACACATCCTGGGCCTCCAAGGCAGAGGAGAGGG...ACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR-3UTR CCA 90 bp CCAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTCCCCAATGCTTCTCCTaGGATATTGGCCCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: PAHQCTPSSAADCPELTAPQCFS*DIGPSE
Trigger: CTCTGAGGGGCCAATATCCCAGGAGAAGCATTGGGG...AGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR-3UTR CCA 90 bp CCAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTCTTCTCCTGGGATATTaGCCCCTCAGAGGTCATGGT +
Preference number: 2 (lower is better)
Translates to: PAHQCTPSSAADCPELTALLLGY*PLRGHG
Trigger: ACCATGACCTCTGAGGGGCCAATATCCCAGGAGAAG...AGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR-3UTR GCA 90 bp CATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTTACCCCCCAACTCCCCAATaGTTCTCCTGGGATATTGGC +
Preference number: 2 (lower is better)
Translates to: HQCTPSSAADCPELTACYPPTPQ*FSWDIG
Trigger: GCCAATATCCCAGGAGAAGCATTGGGGAGTTGGGGG...GTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAACTTGTGATCAGGAAGTaGGCCAGGAAGGTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQLVIRK*ARKVCS
Trigger: GGAACAGACCTTCCTGGCCCACTTCCTGATCACAAG...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
3UTR-3UTR CCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTCTTGTGATCAGGAAGTaGGCCAGGAAGGTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSLVIRK*ARKVCS
Trigger: GGAACAGACCTTCCTGGCCCACTTCCTGATCACAAG...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
3UTR-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGTGGGGTGTCCTGAAGTaGTTTGGACCCCTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRWGVLK*FGPLRA
Trigger: TGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCA...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
3UTR-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCACTTGTGATCAGGAAGTaGGCCAGGAAGGTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: VFEVPSHICKQMQTRPQALVIRK*ARKVCS
Trigger: GGAACAGACCTTCCTGGCCCACTTCCTGATCACAAG...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
3UTR GCA 72 bp GGAGGCCCAGGATGTGTGAGTCCTGGGTCCTTCACCTaGCCCCAACTCCCCAATGCTTCTCCTGGGATATTG +
Preference number: 3 (lower is better)
Translates to: GGPGCVSPGSFT*PQLPNASPGIL
Trigger: CAATATCCCAGGAGAAGCATTGGGGAGTTGGGGGCAGGTGAAGGACCCAGGACTCACACATCCTGGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR GCA 72 bp GATTTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTaGCTTGGAGGCCCAGGATGTGTGAGTCCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: DFPPDLLEDPLL*LGGPGCVSPGS
Trigger: GGACCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR TCA 72 bp AATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTaGCTGCTTGTTACGGATTTTCCTCCTGACCTTCTT +
Preference number: 3 (lower is better)
Translates to: NVLLLPPPTVLS*LLVTDFPPDLL
Trigger: AAGAAGGTCAGGAGGAAAATCCGTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
3UTR-3UTR CAA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGACTAAAGGACATCTCTaGGGGTGTCCTGAAGTGATT +
Preference number: 3 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRTKGHL*GCPEVI
Trigger: AATCACTTCAGGACACCCCAAGAGATGTCCTTTAGT...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
3UTR GCA 72 bp TACATAACAGAAGTATTTGAGGTACCCTCTCATATATaGAAACAAATGCAGACTAGGCCTCAGGCAGAGACT +
Preference number: 3 (lower is better)
Translates to: YITEVFEVPSHI*KQMQTRPQAET
Trigger: AGTCTCTGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTTCTGTTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CTCCTCTGCCTTGGAGGCCCAGGATGTGTGAGTCCTGGGTCCTTCACCTGCCCCGGCCCAGTTTCCCCCTaGATCCTCTCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLCLGGPGCVSPGSFTCPGPVSP*ILSRAP
Trigger: AGGGGCCCTGGAGAGGATGCAGGGGGAAACTGGGCC...GGGGCAGGTGAAGGACCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp CTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTGTGAGTCCTGGGTGGGGCTACGGTGCCTaGTCTGGGCAGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLEDPLLCLGGPGCVSPGWGYGA*SGQDVG
Trigger: GCCCACATCCTGCCCAGAGCAGGCACCGTAGCCCCA...CCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CCA 90 bp CTCCTCTGCCTTGGAGGCCCAGGATGTGTGAGTCCTGGGTCCTTCACCTGCCCCGTGAGGCCCCTGGGTTaGGATACCCTTAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLCLGGPGCVSPGSFTCPVRPLG*DTLRGS
Trigger: GCTTCCCCTAAGGGTATCCCAACCCAGGGGCCTCAC...GGGGCAGGTGAAGGACCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CCA 90 bp CTCCTCTGCCTTGGAGGCCCAGGATGTGTGAGTCCTGGGTCCTTCACCTGCCCCAGGATGTGTGAGTCCTaGGTCCTTCACCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LLCLGGPGCVSPGSFTCPRMCES*VLHLPP
Trigger: TGGGGGCAGGTGAAGGACCCAGGACTCACACATCCT...GGGGCAGGTGAAGGACCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp CCAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTCGCCGCCGACTGTCCTaGGCTGACTGCTTGTTACGG +
Preference number: 4 (lower is better)
Translates to: PAHQCTPSSAADCPELTARRRLS*ADCLLR
Trigger: CCGTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCG...AGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CCA 90 bp CCAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTGAGAACTGGTTGCCCTaGGGGCAGGGGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: PAHQCTPSSAADCPELTAENWLP*GQGDCL
Trigger: CAGACAGTCCCCCTGCCCCCAGGGCAACCAGTTCTC...AGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp CTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTGTGAGTCCTGGGGGCAGGATGTGGGCATaGGCATCAAAGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LLEDPLLCLGGPGCVSPGGRMWA*ASKGSS
Trigger: TGAGCTGCCCTTTGATGCTCATGCCCACATCCTGCC...CCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp CTCCTCTGCCTTGGAGGCCCAGGATGTGTGAGTCCTGGGTCCTTCACCTGCCCCAGATGCCACTGTCACTaGCAGGAGATGCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLCLGGPGCVSPGSFTCPRCHCH*QEMLLS
Trigger: GCTCAGAAGCATCTCCTGGCAGTGACAGTGGCATCT...GGGGCAGGTGAAGGACCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp CCAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTCATAGGAGAACTGGTTaGCCTGGGGGCAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: PAHQCTPSSAADCPELTAHRRTG*PGGRGT
Trigger: AGTCCCCCTGCCCCCAGGGCAACCAGTTCTCCTATG...AGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGGCCCAGTTTCCCCCTaGATCCTCTCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRGPVSP*ILSRAP
Trigger: AGGGGCCCTGGAGAGGATGCAGGGGGAAACTGGGCC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTGGGGCTACGGTGCCTaGTCTGGGCAGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRWGYGA*SGQDVG
Trigger: GCCCACATCCTGCCCAGAGCAGGCACCGTAGCCCCA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CCCAACTCCCCAATGCTTCTCCTGGGATATTGGCCCCTCAGAGGTCATGGTGAGGCACTGGGGCTACGGTaGCTGCTCTGGGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: PNSPMLLLGYWPLRGHGEALGLR*LLWAGC
Trigger: ACATCCTGCCCAGAGCAGGCACCGTAGCCCCAGTGC...CTCACCATGACCTCTGAGGGGCCAATATCCCAGGAGAAGCATTGGGGAGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp CCAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTAGGGAAACCCCTTCCTaGCCCAGCAGACGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PAHQCTPSSAADCPELTARETPS*PSRRFS
Trigger: GGAGAAGCGTCTGCTGGGGCAGGAAGGGGTTTCCCT...AGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGCAGCACGGACCGGATaGGCCCACTGGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRAARTG*AHWVLA
Trigger: AGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CCAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTCGAGAAGATATCCTCTaGGGGCTCCAGCCACGCGTC +
Preference number: 4 (lower is better)
Translates to: PAHQCTPSSAADCPELTAREDIL*GLQPRV
Trigger: GACGCGTGGCTGGAGCCCCCAGAGGATATCTTCTCG...AGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CCA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTGGCAGGGGGACTGTCTaGATGGCAGGGGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCGRGTV*MAGVLR
Trigger: TCTGAGGACCCCTGCCATCCAGACAGTCCCCCTGCC...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp CCCAACTCCCCAATGCTTCTCCTGGGATATTGGCCCCTCAGAGGTCATGGTGAGGAGGCCCAGGATGTGTaGGTCCTGGGTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: PNSPMLLLGYWPLRGHGEEAQDV*VLGPSP
Trigger: AGGTGAAGGACCCAGGACTCACACATCCTGGGCCTC...CTCACCATGACCTCTGAGGGGCCAATATCCCAGGAGAAGCATTGGGGAGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAGGCCCAGTTTCCCCCTaGATCCTCTCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQGPVSP*ILSRAP
Trigger: AGGGGCCCTGGAGAGGATGCAGGGGGAAACTGGGCC...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATGGGGCTACGGTGCCTaGTCTGGGCAGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQWGYGA*SGQDVG
Trigger: GCCCACATCCTGCCCAGAGCAGGCACCGTAGCCCCA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAGCAGCACGGACCGGATaGGCCCACTGGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQAARTG*AHWVLA
Trigger: AGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGC...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTCTACGGTGCCTGCTCTaGGCAGGATGTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCLRCLL*AGCGHE
Trigger: CTCATGCCCACATCCTGCCCAGAGCAGGCACCGTAG...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CCA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTGGTTGTACAGGGCACTaGGGCTACGGTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCGCTGH*GYGACS
Trigger: AGAGCAGGCACCGTAGCCCCAGTGCCCTGTACAACC...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CCA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTCCCTCTCCTCTGCCTTaGAGGCCCAGGATGTGTGAG +
Preference number: 4 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCPSPLP*RPRMCE
Trigger: CTCACACATCCTGGGCCTCCAAGGCAGAGGAGAGGG...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp CCAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTGCCAGGAGATGCTTCTaGGCAGTACACCTCATTGGG +
Preference number: 4 (lower is better)
Translates to: PAHQCTPSSAADCPELTAARRCF*AVHLIG
Trigger: CCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGC...AGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATCTCCTCTGCCTTGGTaGGGGGCAGGTGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQSPLPW*GAGERA
Trigger: TGCCCTCTCACCTGCCCCTCACCAAGGCAGAGGAGA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAACGCCGCCGACTGTCCTaGGCTGACTGCTTGTTACGG +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQRRRLS*ADCLLR
Trigger: CCGTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCG...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTGCCAGCATAGCCCGTTaGCCTCCCCAAACACTACAC +
Preference number: 4 (lower is better)
Translates to: AHQCTPSSAADCPELTACASIAR*PPQTLH
Trigger: GTGTAGTGTTTGGGGAGGTCAACGGGCTATGCTGGC...ACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp CTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTGTGAGTCCTGGGTCCATGCTTCTGTTCTaGAGAGCCCAGCCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: LLEDPLLCLGGPGCVSPGSMLLF*RAQPCQ
Trigger: TTGACAGGGCTGGGCTCTTCAGAACAGAAGCATGGA...CCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTAGCATGTTACCTTGGTaGGGGGCAGGTGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCSMLPW*GAGERA
Trigger: TGCCCTCTCACCTGCCCCTCACCAAGGTAACATGCT...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTAGGGGTCCTCAGAGATaGCACTGTCACTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCRGPQR*HCHCQE
Trigger: CTCCTGGCAGTGACAGTGGCATCTCTGAGGACCCCT...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGCCCAGTTTCCCCCTaGATCCTCTCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSGPVSP*ILSRAP
Trigger: AGGGGCCCTGGAGAGGATGCAGGGGGAAACTGGGCC...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCCCAGTTTCCCCCTaGATCCTCTCCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEGPVSP*ILSRAP
Trigger: AGGGGCCCTGGAGAGGATGCAGGGGGAAACTGGGCC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTTGGGGCTACGGTGCCTaGTCTGGGCAGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSWGYGA*SGQDVG
Trigger: GCCCACATCCTGCCCAGAGCAGGCACCGTAGCCCCA...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAGCAGCACGGACCGGATaGGCCCACTGGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEAARTG*AHWVLA
Trigger: AGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGC...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGCAGCACGGACCGGATaGGCCCACTGGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEAARTG*AHWVLA
Trigger: AGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CCAGCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTCCCCCAACTCCCCAATaGTTCTCCTGGGATATTGGC +
Preference number: 4 (lower is better)
Translates to: PAHQCTPSSAADCPELTAPPTPQ*FSWDIG
Trigger: GCCAATATCCCAGGAGAAGCATTGGGGAGTTGGGGG...AGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAGGCAGGGGGACTGTCTaGATGGCAGGGGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQGRGTV*MAGVLR
Trigger: TCTGAGGACCCCTGCCATCCAGACAGTCCCCCTGCC...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGCTACGGTGCCTGCTCTaGGCAGGATGTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRLRCLL*AGCGHE
Trigger: CTCATGCCCACATCCTGCCCAGAGCAGGCACCGTAG...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTCAAAGGGCAGCTCACTaGCCATGCAGGAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCQRAAH*PCRNQA
Trigger: TGCCTGATTCCTGCATGGTCAGTGAGCTGCCCTTTG...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGGCAGGATGTGGGCATaGGCATCAAAGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRGRMWA*ASKGSS
Trigger: TGAGCTGCCCTTTGATGCTCATGCCCACATCCTGCC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTTCTCCTCTGCCTTGGTaGGGGGCAGGTGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSSPLPW*GAGERA
Trigger: TGCCCTCTCACCTGCCCCTCACCAAGGCAGAGGAGA...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAATCTCCTCTGCCTTGGTaGGGGGCAGGTGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQESPLPW*GAGERA
Trigger: TGCCCTCTCACCTGCCCCTCACCAAGGCAGAGGAGA...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTCGCCGCCGACTGTCCTaGGCTGACTGCTTGTTACGG +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSRRRLS*ADCLLR
Trigger: CCGTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCG...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAGGGGTCCTCAGAGATaGCACTGTCACTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRRGPQR*HCHCQE
Trigger: CTCCTGGCAGTGACAGTGGCATCTCTGAGGACCCCT...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTCCTCTCCAGGGCCCCTaGCTCATAGACAACCTCATA +
Preference number: 4 (lower is better)
Translates to: AHQCTPSSAADCPELTACPLQGP*LIDNLI
Trigger: TATGAGGTTGTCTATGAGGCAGGGGCCCTGGAGAGG...ACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR GCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGCACTGGGGCTACGGTaGCTGCTCTGGGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEALGLR*LLWAGC
Trigger: ACATCCTGCCCAGAGCAGGCACCGTAGCCCCAGTGC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAGCACTGGGGCTACGGTaGCTGCTCTGGGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEALGLR*LLWAGC
Trigger: ACATCCTGCCCAGAGCAGGCACCGTAGCCCCAGTGC...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAAGGGAAACCCCTTCCTaGCCCAGCAGACGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQRETPS*PSRRFS
Trigger: GGAGAAGCGTCTGCTGGGGCAGGAAGGGGTTTCCCT...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGAGGACCCTCTCCTCTaGCTTGGTGAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEEDPLL*LGEGQV
Trigger: CACCTGCCCCTCACCAAGGCAGAGGAGAGGGTCCTC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAGAGGACCCTCTCCTCTaGCTTGGTGAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEEDPLL*LGEGQV
Trigger: CACCTGCCCCTCACCAAGGCAGAGGAGAGGGTCCTC...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTGTGAGTCCTGGGGGATTCCGAGATCCATaGTTCTGTTCTGAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLEDPLLCLGGPGCVSPGGFRDP*FCSEEP
Trigger: GGGCTCTTCAGAACAGAAGCATGGATCTCGGAATCC...CCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAACGAGAAGATATCCTCTaGGGGCTCCAGCCACGCGTC +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQREDIL*GLQPRV
Trigger: GACGCGTGGCTGGAGCCCCCAGAGGATATCTTCTCG...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGCAGGGGGACTGTCTaGATGGCAGGGGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSGRGTV*MAGVLR
Trigger: TCTGAGGACCCCTGCCATCCAGACAGTCCCCCTGCC...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAGAGAACTGGTTGCCCTaGGGGCAGGGGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEENWLP*GQGDCL
Trigger: CAGACAGTCCCCCTGCCCCCAGGGCAACCAGTTCTC...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAGGTTGTACAGGGCACTaGGGCTACGGTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQGCTGH*GYGACS
Trigger: AGAGCAGGCACCGTAGCCCCAGTGCCCTGTACAACC...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGACCGGATGCGCCCACTaGGTCTTGGCTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPETGCAH*VLASLP
Trigger: TGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGT...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTACCGGATGCGCCCACTaGGTCTTGGCTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSTGCAH*VLASLP
Trigger: TGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGT...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGTCAGGAACAGGGTTTaGCAGGGCAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRVRNRV*QGSRVV
Trigger: TACAACCCTGCTGCCCTGTCAAACCCTGTTCCTGAC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAGCCAGCATAGCCCGTTaGCCTCCCCAAACACTACAC +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQASIAR*PPQTLH
Trigger: GTGTAGTGTTTGGGGAGGTCAACGGGCTATGCTGGC...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368600.7
ENST00000368603.5
CDS-3UTR TCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATCAGGCTCACTCTCTTaGAGGCCCGGAACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQSGSLS*RPGTSG
Trigger: TCCAGAGGTTCCGGGCCTTCAAGAGAGTGAGCCTGA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368600.7
CDS-3UTR GCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCATAGGAGAACTGGTTaGCCTGGGGGCAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEHRRTG*PGGRGT
Trigger: AGTCCCCCTGCCCCCAGGGCAACCAGTTCTCCTATG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAACATAGGAGAACTGGTTaGCCTGGGGGCAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEHRRTG*PGGRGT
Trigger: AGTCCCCCTGCCCCCAGGGCAACCAGTTCTCCTATG...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGAGGGAAACCCCTTCCTaGCCCAGCAGACGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPERETPS*PSRRFS
Trigger: GGAGAAGCGTCTGCTGGGGCAGGAAGGGGTTTCCCT...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAAGGGAAACCCCTTCCTaGCCCAGCAGACGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQERETPS*PSRRFS
Trigger: GGAGAAGCGTCTGCTGGGGCAGGAAGGGGTTTCCCT...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAACACATCTCATCTGCATaGAGCACGGACCGGATGCGC +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQHISSA*STDRMR
Trigger: GCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTG...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCGAGAAGATATCCTCTaGGGGCTCCAGCCACGCGTC +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEREDIL*GLQPRV
Trigger: GACGCGTGGCTGGAGCCCCCAGAGGATATCTTCTCG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCTACGGTGCCTGCTCTaGGCAGGATGTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPELRCLL*AGCGHE
Trigger: CTCATGCCCACATCCTGCCCAGAGCAGGCACCGTAG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGTTGTACAGGGCACTaGGGCTACGGTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEGCTGH*GYGACS
Trigger: AGAGCAGGCACCGTAGCCCCAGTGCCCTGTACAACC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGCTTCTGGTCGACTCTaGAATGGACTGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRASGRL*NGLKLG
Trigger: GCCCAGCTTCAGTCCATTCCAGAGTCGACCAGAAGC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGTGGCTCCCTCAGTCTaGACTCTACCACTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRVAPSV*TLPLGS
Trigger: AGACCCAAGTGGTAGAGTCCAGACTGAGGGAGCCAC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAATCCTTGGCTCCAGGTaGCTCCCTCAGTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQILGSR*LPQSGL
Trigger: GAGTCCAGACTGAGGGAGCCACCTGGAGCCAAGGAT...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAGCCATTTGCATCCTTaGCTCCAGGTGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRSHLHP*LQVAPS
Trigger: TGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCT...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CCCAACTCCCCAATGCTTCTCCTGGGATATTGGCCCCTCAGAGGTCATGGTGAGCTTCTCCTGGGATATTaGCCCCTCAGAGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: PNSPMLLLGYWPLRGHGELLLGY*PLRGHG
Trigger: ACCATGACCTCTGAGGGGCCAATATCCCAGGAGAAG...CTCACCATGACCTCTGAGGGGCCAATATCCCAGGAGAAGCATTGGGGAGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAACAAAGGGCAGCTCACTaGCCATGCAGGAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQQRAAH*PCRNQA
Trigger: TGCCTGATTCCTGCATGGTCAGTGAGCTGCCCTTTG...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGGATGTGGGCATaGGCATCAAAGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEGRMWA*ASKGSS
Trigger: TGAGCTGCCCTTTGATGCTCATGCCCACATCCTGCC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp CATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTTACGTCAGGAACAGGGTTTaGCAGGGCAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: HQCTPSSAADCPELTACYVRNRV*QGSRVV
Trigger: TACAACCCTGCTGCCCTGTCAAACCCTGTTCCTGAC...GTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTCCGACTGTCCTGAGCTaGCTGCTTGTTACGGATTTT +
Preference number: 4 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCPTVLS*LLVTDF
Trigger: AAAATCCGTAACAAGCAGTCAGCTCAGGACAGTCGG...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGTGCAGCTGGCGGAGCTaGGCTACCAAGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPECSWRS*ATKEML
Trigger: CAACATCTCCTTGGTAGCTCAGCTCCGCCAGCTGCA...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGTGGGGTGTCCTGAAGTaGTTTGGACCCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEWGVLK*FGPLRA
Trigger: TGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCA...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAATGGGGTGTCCTGAAGTaGTTTGGACCCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEWGVLK*FGPLRA
Trigger: TGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCA...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTCCATGCTTCTGTTCTaGAGAGCCCAGCCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRSMLLF*RAQPCQ
Trigger: TTGACAGGGCTGGGCTCTTCAGAACAGAAGCATGGA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368600.7
ENST00000368603.5
CDS-3UTR GCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCCGGACTTCCAGCCTTaGAGTCCCTGTTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEPDFQP*SPCSCS
Trigger: GCTACAGGAACAGGGACTGCAAGGCTGGAAGTCCGG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271889.8
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAGATGCCACTGTCACTaGCAGGAGATGCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRRCHCH*QEMLLS
Trigger: GCTCAGAAGCATCTCCTGGCAGTGACAGTGGCATCT...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAAGGGGTCCTCAGAGATaGCACTGTCACTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQERGPQR*HCHCQE
Trigger: CTCCTGGCAGTGACAGTGGCATCTCTGAGGACCCCT...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTAGGGGTCCTCAGAGATaGCACTGTCACTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSRGPQR*HCHCQE
Trigger: CTCCTGGCAGTGACAGTGGCATCTCTGAGGACCCCT...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGACCAAGGAGATGTTGTaGCTCTCCAGCTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRTKEML*LSSSWT
Trigger: AGTCCAGGAGCTGGAGAGGCACAACATCTCCTTGGT...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAACACATCTCATCTGCATaGAGCACGGACCGGATGCGC +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEHISSA*STDRMR
Trigger: GCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTG...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAGCTCACATCTCATCTaGATGCAGCACGGACCGGAT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRSSHLI*MQHGPD
Trigger: ATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCT...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGCTCAGACCCAGCTTCTaGTCGACTCTGGAATGGACT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRLRPSF*STLEWT
Trigger: AGTCCATTCCAGAGTCGACCAGAAGCTGGGTCTGAG...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTATCCTTGGCTCCAGGTaGCTCCCTCAGTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSILGSR*LPQSGL
Trigger: GAGTCCAGACTGAGGGAGCCACCTGGAGCCAAGGAT...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGCTTGTGATCAGGAAGTaGGCCAGGAAGGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRLVIRK*ARKVCS
Trigger: GGAACAGACCTTCCTGGCCCACTTCCTGATCACAAG...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTGTCCTGAAGTGATTTaGACCCCTGAGGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRCPEVI*TPEGRH
Trigger: GTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTTACCCCCAATGCTTCTCCTaGGATATTGGCCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HQCTPSSAADCPELTACYPQCFS*DIGPSE
Trigger: CTCTGAGGGGCCAATATCCCAGGAGAAGCATTGGGG...GTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR TCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAGGGGACTAAGAGTCTaGGGGTCCACAAACGGAATT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRRGLRV*GSTNGI
Trigger: AATTCCGTTTGTGGACCCTCAGACTCTTAGTCCCCT...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR TCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGCCAGGAGATGCTTCTaGGCAGTACACCTCATTGGG +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSARRCF*AVHLIG
Trigger: CCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGC...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGCCAGGAGATGCTTCTaGGCAGTACACCTCATTGGG +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEARRCF*AVHLIG
Trigger: CCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTCAAAGGGCAGCTCACTaGCCATGCAGGAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSQRAAH*PCRNQA
Trigger: TGCCTGATTCCTGCATGGTCAGTGAGCTGCCCTTTG...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCAAAGGGCAGCTCACTaGCCATGCAGGAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEQRAAH*PCRNQA
Trigger: TGCCTGATTCCTGCATGGTCAGTGAGCTGCCCTTTG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAACAAAGGGCAGCTCACTaGCCATGCAGGAATCAGGCA +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEQRAAH*PCRNQA
Trigger: TGCCTGATTCCTGCATGGTCAGTGAGCTGCCCTTTG...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGCCGACTGTCCTGAGCTaGCTGCTTGTTACGGATTTT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRPTVLS*LLVTDF
Trigger: AAAATCCGTAACAAGCAGTCAGCTCAGGACAGTCGG...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATCCATGCTTCTGTTCTaGAGAGCCCAGCCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQSMLLF*RAQPCQ
Trigger: TTGACAGGGCTGGGCTCTTCAGAACAGAAGCATGGA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368600.7
ENST00000368603.5
CDS-3UTR GCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTCACAGGACTCCTGAATaGCTGTTCTGTAGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSHRTPE*LFCSPR
Trigger: GCGAGGGCTACAGAACAGGCATTCAGGAGTCCTGTG...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAACACAGGACTCCTGAATaGCTGTTCTGTAGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEHRTPE*LFCSPR
Trigger: GCGAGGGCTACAGAACAGGCATTCAGGAGTCCTGTG...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAACCTCTCCAGGGCCCCTaGCTCATAGACAACCTCATA +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEPLQGP*LIDNLI
Trigger: TATGAGGTTGTCTATGAGGCAGGGGCCCTGGAGAGG...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCCTCTCCAGGGCCCCTaGCTCATAGACAACCTCATA +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEPLQGP*LIDNLI
Trigger: TATGAGGTTGTCTATGAGGCAGGGGCCCTGGAGAGG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAACCAAGGAGATGTTGTaGCTCTCCAGCTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQTKEML*LSSSWT
Trigger: AGTCCAGGAGCTGGAGAGGCACAACATCTCCTTGGT...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAAGCTCACATCTCATCTaGATGCAGCACGGACCGGAT +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQSSHLI*MQHGPD
Trigger: ATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCT...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGGATTCCGAGATCCATaGTTCTGTTCTGAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRGFRDP*FCSEEP
Trigger: GGGCTCTTCAGAACAGAAGCATGGATCTCGGAATCC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368600.7
ENST00000368603.5
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGATAAGGCCTACATTTaGCCCAGTTTCCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRDKAYI*PSFPLH
Trigger: ATGCAGGGGGAAACTGGGCCAAATGTAGGCCTTATC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAGCTTCTGGTCGACTCTaGAATGGACTGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEASGRL*NGLKLG
Trigger: GCCCAGCTTCAGTCCATTCCAGAGTCGACCAGAAGC...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAACTCAGACCCAGCTTCTaGTCGACTCTGGAATGGACT +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQLRPSF*STLEWT
Trigger: AGTCCATTCCAGAGTCGACCAGAAGCTGGGTCTGAG...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGGGTCAGGATATTTCTaGAAGTCACTCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRGSGYF*KSLREA
Trigger: AGCCTCACGGAGTGACTTCCAGAAATATCCTGACCC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGTGGCTCCCTCAGTCTaGACTCTACCACTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSVAPSV*TLPLGS
Trigger: AGACCCAAGTGGTAGAGTCCAGACTGAGGGAGCCAC...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGTGGCTCCCTCAGTCTaGACTCTACCACTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEVAPSV*TLPLGS
Trigger: AGACCCAAGTGGTAGAGTCCAGACTGAGGGAGCCAC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAAGCCATTTGCATCCTTaGCTCCAGGTGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQESHLHP*LQVAPS
Trigger: TGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCT...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGCCGCGCCCTTTCTGCTaGAGTTTTCTCTTAGCTATA +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRPRPFC*SFLLAI
Trigger: TATAGCTAAGAGAAAACTGCAGCAGAAAGGGCGCGG...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR GCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTAGATGCCACTGTCACTaGCAGGAGATGCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSRCHCH*QEMLLS
Trigger: GCTCAGAAGCATCTCCTGGCAGTGACAGTGGCATCT...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGCACTGGGGCTACGGTaGCTGCTCTGGGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAALGLR*LLWAGC
Trigger: ACATCCTGCCCAGAGCAGGCACCGTAGCCCCAGTGC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGAGGACCCTCTCCTCTaGCTTGGTGAGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAEDPLL*LGEGQV
Trigger: CACCTGCCCCTCACCAAGGCAGAGGAGAGGGTCCTC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAACCAAGGAGATGTTGTaGCTCTCCAGCTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQETKEML*LSSSWT
Trigger: AGTCCAGGAGCTGGAGAGGCACAACATCTCCTTGGT...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAAGCTCACATCTCATCTaGATGCAGCACGGACCGGAT +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQESSHLI*MQHGPD
Trigger: ATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCT...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTAGCTCACATCTCATCTaGATGCAGCACGGACCGGAT +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSSSHLI*MQHGPD
Trigger: ATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCT...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTTACGATAAGGCCTACATTTaGCCCAGTTTCCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: HQCTPSSAADCPELTACYDKAYI*PSFPLH
Trigger: ATGCAGGGGGAAACTGGGCCAAATGTAGGCCTTATC...GTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTCAAAACACAAGTGCTaGTCTGGGCAGCTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRSKHKC*SGQLCW
Trigger: CCAACAAAGCTGCCCAGACCAGCACTTGTGTTTTGA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAGGGTCAGGATATTTCTaGAAGTCACTCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQGSGYF*KSLREA
Trigger: AGCCTCACGGAGTGACTTCCAGAAATATCCTGACCC...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAACCGGATGCGCCCACTaGGTCTTGGCTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQATGCAH*VLASLP
Trigger: TGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCTTGTGATCAGGAAGTaGGCCAGGAAGGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPELVIRK*ARKVCS
Trigger: GGAACAGACCTTCCTGGCCCACTTCCTGATCACAAG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTTGTCCTGAAGTGATTTaGACCCCTGAGGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSCPEVI*TPEGRH
Trigger: GTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGAGGGGACTAAGAGTCTaGGGGTCCACAAACGGAATT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPERGLRV*GSTNGI
Trigger: AATTCCGTTTGTGGACCCTCAGACTCTTAGTCCCCT...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR TCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCCGACTGTCCTGAGCTaGCTGCTTGTTACGGATTTT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEPTVLS*LLVTDF
Trigger: AAAATCCGTAACAAGCAGTCAGCTCAGGACAGTCGG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTCCGACTGTCCTGAGCTaGCTGCTTGTTACGGATTTT +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSPTVLS*LLVTDF
Trigger: AAAATCCGTAACAAGCAGTCAGCTCAGGACAGTCGG...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCGCCGCCGACTGTCCTaGGCTGACTGCTTGTTACGG +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRRRRLS*ADCLLR
Trigger: CCGTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCG...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAGCTTTGTTGGAAGTTTaGGCAATTAGCGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQALLEV*AISVCS
Trigger: GCTGCAGACGCTAATTGCTCAAACTTCCAACAAAGC...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTAAGCAGTGTCCTTGTTaGGCCATTTGCATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSKQCPC*AICILG
Trigger: GCCAAGGATGCAAATGGCTCAACAAGGACACTGCTT...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAACCGCGCCCTTTCTGCTaGAGTTTTCTCTTAGCTATA +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQPRPFC*SFLLAI
Trigger: TATAGCTAAGAGAAAACTGCAGCAGAAAGGGCGCGG...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR GCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAAGGGAAACCCCTTCCTaGCCCAGCAGACGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQARETPS*PSRRFS
Trigger: GGAGAAGCGTCTGCTGGGGCAGGAAGGGGTTTCCCT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGATTCCGAGATCCATaGTTCTGTTCTGAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSGFRDP*FCSEEP
Trigger: GGGCTCTTCAGAACAGAAGCATGGATCTCGGAATCC...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368600.7
ENST00000368603.5
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGGCAGGGGGACTGTCTaGATGGCAGGGGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRGRGTV*MAGVLR
Trigger: TCTGAGGACCCCTGCCATCCAGACAGTCCCCCTGCC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGAGAACTGGTTGCCCTaGGGGCAGGGGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRENWLP*GQGDCL
Trigger: CAGACAGTCCCCCTGCCCCCAGGGCAACCAGTTCTC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGATAAGGCCTACATTTaGCCCAGTTTCCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEDKAYI*PSFPLH
Trigger: ATGCAGGGGGAAACTGGGCCAAATGTAGGCCTTATC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGGTTGTACAGGGCACTaGGGCTACGGTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAGCTGH*GYGACS
Trigger: AGAGCAGGCACCGTAGCCCCAGTGCCCTGTACAACC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTCTGGGCAGCTTTGTTaGAAGTTTGAGCAATTAGCG +
Preference number: 4 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRSGQLC*KFEQLA
Trigger: CGCTAATTGCTCAAACTTCCAACAAAGCTGCCCAGA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAACACAAGTGCTGGTCTaGGCAGCTTTGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQTQVLV*AALLEV
Trigger: AACTTCCAACAAAGCTGCCCAGACCAGCACTTGTGT...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATCAAAACACAAGTGCTaGTCTGGGCAGCTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQSKHKC*SGQLCW
Trigger: CCAACAAAGCTGCCCAGACCAGCACTTGTGTTTTGA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAGGGTCAGGATATTTCTaGAAGTCACTCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEGSGYF*KSLREA
Trigger: AGCCTCACGGAGTGACTTCCAGAAATATCCTGACCC...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGGTCAGGATATTTCTaGAAGTCACTCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEGSGYF*KSLREA
Trigger: AGCCTCACGGAGTGACTTCCAGAAATATCCTGACCC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGGCAGGATGTGGGCATaGGCATCAAAGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAGRMWA*ASKGSS
Trigger: TGAGCTGCCCTTTGATGCTCATGCCCACATCCTGCC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCATGCAGCTGGCGGAGCTaGGCTACCAAGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQACSWRS*ATKEML
Trigger: CAACATCTCCTTGGTAGCTCAGCTCCGCCAGCTGCA...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGCTTTGTTGGAAGTTTaGGCAATTAGCGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEALLEV*AISVCS
Trigger: GCTGCAGACGCTAATTGCTCAAACTTCCAACAAAGC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCACACATCTCATCTGCATaGAGCACGGACCGGATGCGC +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAHISSA*STDRMR
Trigger: GCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTG...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGTGCTTACTACAAAAGTaGATGCCACCTTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPECLLQK*MPPCQE
Trigger: CTCCTGGCAAGGTGGCATCCACTTTTGTAGTAAGCA...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271889.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCGAGAAGATATCCTCTaGGGGCTCCAGCCACGCGTC +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRREDIL*GLQPRV
Trigger: GACGCGTGGCTGGAGCCCCCAGAGGATATCTTCTCG...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCTACGGTGCCTGCTCTaGGCAGGATGTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRLRCLL*AGCGHE
Trigger: CTCATGCCCACATCCTGCCCAGAGCAGGCACCGTAG...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGACACAAGTGCTGGTCTaGGCAGCTTTGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPETQVLV*AALLEV
Trigger: AACTTCCAACAAAGCTGCCCAGACCAGCACTTGTGT...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAATCAAAACACAAGTGCTaGTCTGGGCAGCTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQESKHKC*SGQLCW
Trigger: CCAACAAAGCTGCCCAGACCAGCACTTGTGTTTTGA...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAACTGGACTCTACCACTTaGGTCTCCAGATTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQLDSTT*VSRFSV
Trigger: AACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAG...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAATCCTTGGCTCCAGGTaGCTCCCTCAGTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAILGSR*LPQSGL
Trigger: GAGTCCAGACTGAGGGAGCCACCTGGAGCCAAGGAT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGTCAGGAACAGGGTTTaGCAGGGCAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAVRNRV*QGSRVV
Trigger: TACAACCCTGCTGCCCTGTCAAACCCTGTTCCTGAC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGTGCAGCTGGCGGAGCTaGGCTACCAAGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRCSWRS*ATKEML
Trigger: CAACATCTCCTTGGTAGCTCAGCTCCGCCAGCTGCA...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGCCAGCATAGCCCGTTaGCCTCCCCAAACACTACAC +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRASIAR*PPQTLH
Trigger: GTGTAGTGTTTGGGGAGGTCAACGGGCTATGCTGGC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368600.7
ENST00000368603.5
CDS-3UTR GCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGAATCAAAACACAAGTaGTGGTCTGGGCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSESKHK*WSGQLC
Trigger: ACAAAGCTGCCCAGACCAGCACTTGTGTTTTGATTC...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAGAATCAAAACACAAGTaGTGGTCTGGGCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEESKHK*WSGQLC
Trigger: ACAAAGCTGCCCAGACCAGCACTTGTGTTTTGATTC...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAATATATGCAAACAAATaGAGACTAGGCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQIYANK*RLGLRQ
Trigger: CTGCCTGAGGCCTAGTCTGCATTTGTTTGCATATAT...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGATCTTCCTGAGGGTTTaGTGTCTCCTAGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEIFLRV*CLLAEE
Trigger: TTCTTCAGCTAGGAGACACCAAACCCTCAGGAAGAT...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR CCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAATCTGGGCAGCTTTGTTaGAAGTTTGAGCAATTAGCG +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQESGQLC*KFEQLA
Trigger: CGCTAATTGCTCAAACTTCCAACAAAGCTGCCCAGA...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTTCTGGGCAGCTTTGTTaGAAGTTTGAGCAATTAGCG +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSSGQLC*KFEQLA
Trigger: CGCTAATTGCTCAAACTTCCAACAAAGCTGCCCAGA...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGCTTCTGGTCGACTCTaGAATGGACTGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAASGRL*NGLKLG
Trigger: GCCCAGCTTCAGTCCATTCCAGAGTCGACCAGAAGC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATCTGTTACGTCCTTGTaGGTCAGGATATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQSVTSL*VRIFLE
Trigger: TTCCAGAAATATCCTGACCCACAAGGACGTAACAGA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTCTGGACTCTACCACTTaGGTCTCCAGATTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSLDSTT*VSRFSV
Trigger: AACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAG...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCTGGACTCTACCACTTaGGTCTCCAGATTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPELDSTT*VSRFSV
Trigger: AACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGATCCTTGGCTCCAGGTaGCTCCCTCAGTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRILGSR*LPQSGL
Trigger: GAGTCCAGACTGAGGGAGCCACCTGGAGCCAAGGAT...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGCCAGGAGATGCTTCTaGGCAGTACACCTCATTGGG +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRARRCF*AVHLIG
Trigger: CCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGTCAGGAACAGGGTTTaGCAGGGCAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRVRNRV*QGSRVV
Trigger: TACAACCCTGCTGCCCTGTCAAACCCTGTTCCTGAC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAATCTGTTACGTCCTTGTaGGTCAGGATATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQESVTSL*VRIFLE
Trigger: TTCCAGAAATATCCTGACCCACAAGGACGTAACAGA...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGTGGCTCCCTCAGTCTaGACTCTACCACTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRVAPSV*TLPLGS
Trigger: AGACCCAAGTGGTAGAGTCCAGACTGAGGGAGCCAC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGAGCCATTTGCATCCTTaGCTCCAGGTGGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRSHLHP*LQVAPS
Trigger: TGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCT...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCATGTCCTGAAGTGATTTaGACCCCTGAGGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQACPEVI*TPEGRH
Trigger: GTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAAAGCAGTGTCCTTGTTaGGCCATTTGCATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAKQCPC*AICILG
Trigger: GCCAAGGATGCAAATGGCTCAACAAGGACACTGCTT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGTACCCTCTCATATATaGAAACAAATGCAGACTAGG +
Preference number: 4 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSVPSHI*KQMQTR
Trigger: CCTAGTCTGCATTTGTTTGCATATATGAGAGGGTAC...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGTACCCTCTCATATATaGAAACAAATGCAGACTAGG +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEVPSHI*KQMQTR
Trigger: CCTAGTCTGCATTTGTTTGCATATATGAGAGGGTAC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCATGTAGCCCTCGCTTTTaGAAGAGGGAGATCATGGCA +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQACSPRF*KREIMA
Trigger: TGCCATGATCTCCCTCTTGCAAAAGCGAGGGCTACA...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGATAAGGCCTACATTTaGCCCAGTTTCCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQADKAYI*PSFPLH
Trigger: ATGCAGGGGGAAACTGGGCCAAATGTAGGCCTTATC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGTGTCCTGAAGTGATTTaGACCCCTGAGGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRCPEVI*TPEGRH
Trigger: GTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCATTGGTGTCTCCTAGCTaGAGAACAGAAAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQALVSPS*RTEKAV
Trigger: CACAGCCTTTTCTGTTCTTCAGCTAGGAGACACCAA...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR TCA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCCTCATTGGGATCAATaGAAAGCTTCAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEPHWDQ*KASRNL
Trigger: AAGATTTCTTGAAGCTTTTCATTGATCCCAATGAGG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCCGACTGTCCTGAGCTaGCTGCTTGTTACGGATTTT +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRPTVLS*LLVTDF
Trigger: AAAATCCGTAACAAGCAGTCAGCTCAGGACAGTCGG...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGCTTTGTTGGAAGTTTaGGCAATTAGCGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAALLEV*AISVCS
Trigger: GCTGCAGACGCTAATTGCTCAAACTTCCAACAAAGC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGAAGCAGTGTCCTTGTTaGGCCATTTGCATCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRKQCPC*AICILG
Trigger: GCCAAGGATGCAAATGGCTCAACAAGGACACTGCTT...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAAGAAAAGGCTGTGACTaGAGCACAGGACTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQARKGCD*STGLLN
Trigger: ATTCAGGAGTCCTGTGCTCCAGTCACAGCCTTTTCT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGATAAGGCCTACATTTaGCCCAGTTTCCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRDKAYI*PSFPLH
Trigger: ATGCAGGGGGAAACTGGGCCAAATGTAGGCCTTATC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAACACAAGTGCTGGTCTaGGCAGCTTTGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQATQVLV*AALLEV
Trigger: AACTTCCAACAAAGCTGCCCAGACCAGCACTTGTGT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGCTTTGTTGGAAGTTTaGGCAATTAGCGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRALLEV*AISVCS
Trigger: GCTGCAGACGCTAATTGCTCAAACTTCCAACAAAGC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGAGAAAAGGCTGTGACTaGAGCACAGGACTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRRKGCD*STGLLN
Trigger: ATTCAGGAGTCCTGTGCTCCAGTCACAGCCTTTTCT...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAATCTTCCTGAGGGTTTaGTGTCTCCTAGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAIFLRV*CLLAEE
Trigger: TTCTTCAGCTAGGAGACACCAAACCCTCAGGAAGAT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGACACAAGTGCTGGTCTaGGCAGCTTTGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRTQVLV*AALLEV
Trigger: AACTTCCAACAAAGCTGCCCAGACCAGCACTTGTGT...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCACTGGACTCTACCACTTaGGTCTCCAGATTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQALDSTT*VSRFSV
Trigger: AACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAG...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGCAAGAGGGAGATCATaGCAGGGTTGTAAACAAAGG +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRARGRS*QGCKQR
Trigger: CCTTTGTTTACAACCCTGCCATGATCTCCCTCTTGC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368607.8
CDS-3UTR GCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAATATATGCAAACAAATaGAGACTAGGCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAIYANK*RLGLRQ
Trigger: CTGCCTGAGGCCTAGTCTGCATTTGTTTGCATATAT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGTCTGGGCAGCTTTGTTaGAAGTTTGAGCAATTAGCG +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRSGQLC*KFEQLA
Trigger: CGCTAATTGCTCAAACTTCCAACAAAGCTGCCCAGA...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGTACCCTCTCATATATaGAAACAAATGCAGACTAGG +
Preference number: 4 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAVPSHI*KQMQTR
Trigger: CCTAGTCTGCATTTGTTTGCATATATGAGAGGGTAC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGTCTGTTACGTCCTTGTaGGTCAGGATATTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRSVTSL*VRIFLE
Trigger: TTCCAGAAATATCCTGACCCACAAGGACGTAACAGA...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR GCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGTACCCTCTCATATATaGAAACAAATGCAGACTAGG +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRVPSHI*KQMQTR
Trigger: CCTAGTCTGCATTTGTTTGCATATATGAGAGGGTAC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR TCA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCCTCATTGGGATCAATaGAAAGCTTCAAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRPHWDQ*KASRNL
Trigger: AAGATTTCTTGAAGCTTTTCATTGATCCCAATGAGG...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS TCA 90 bp CAGGGCACTGGGGCTACGGTGCCTGCTCTGGGCAGGATGTGGGCATaGGCATCAAAGGGCAGCTCACTGACCATGCAGGAATCAGGCACC +
Preference number: 5 (lower is better)
Translates to: QGTGATVPALGRMWA*ASKGSSLTMQESGT
Trigger: GGTGCCTGATTCCTGCATGGTCAGTGAGCTGCCCTTTGATGCTCATGCCCACATCCTGCCCAGAGCAGGCACCGTAGCCCCAGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000492729.1
CDS CCA 90 bp GTGGAGTCCCAGCTCCAGGACGGATCCTGTCGAGAAGATATCCTCTaGGGGCTCCAGCCACGCGTCCAGCAGGTCAGGGATTCCGAGATC +
Preference number: 5 (lower is better)
Translates to: VESQLQDGSCREDIL*GLQPRVQQVRDSEI
Trigger: GATCTCGGAATCCCTGACCTGCTGGACGCGTGGCTGGAGCCCCCAGAGGATATCTTCTCGACAGGATCCGTCCTGGAGCTGGGACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000473340.1
ENST00000477617.5
ENST00000479010.1
ENST00000492729.1
CDS GCA 90 bp CTCGTCACACTCACACAGCCACGGTCCCCACCGGACTTCCAGCCTTaGAGTCCCTGTTCCTGTAGCCTAGTTACCGGAACCTCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LVTLTQPRSPPDFQP*SPCSCSLVTGTSGG
Trigger: CCCTCCAGAGGTTCCGGTAACTAGGCTACAGGAACAGGGACTGCAAGGCTGGAAGTCCGGTGGGGACCGTGGCTGTGTGAGTGTGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473340.1
CDS-3UTR CAA 90 bp CTCCTCTGCCTTGGAGGCCCAGGATGTGTGAGTCCTGGGTCCTTCACCTGCCCCAGCCAGCATAGCCCGTaGACCTCCCCAAACACTACA +
Preference number: 5 (lower is better)
Translates to: LLCLGGPGCVSPGSFTCPSQHSP*TSPNTT
Trigger: TGTAGTGTTTGGGGAGGTCAACGGGCTATGCTGGCT...GGGGCAGGTGAAGGACCCAGGACTCACACATCCTGGGCCTCCAAGGCAGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS TCA 90 bp GCATCCCCTCGCCCACCGCGTGGCGCTCTTCCCAAAGCTGAGTCCTaGTTGGAAGCTGAAGACTTAGGTTTCGGAGGGGCAGGACATCGA +
Preference number: 5 (lower is better)
Translates to: ASPRPPRGALPKAES*LEAEDLGFGGAGHR
Trigger: TCGATGTCCTGCCCCTCCGAAACCTAAGTCTTCAGCTTCCAATCAGGACTCAGCTTTGGGAAGAGCGCCACGCGGTGGGCGAGGGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477617.5
CDS GCA 90 bp ATCAGGAAGTGGGCCAGGAAGGTCTGTTCCAGCTCACATCTCATCTaGATGCAGCACGGACCGGATGCGCCCACTGGGTCTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: IRKWARKVCSSSHLI*MQHGPDAPTGSWLP
Trigger: GGGAAGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCTGGAACAGACCTTCCTGGCCCACTTCCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS-3UTR CAA 90 bp TTTCCTCCTGACCTTCTTGAGGACCCTCTCCTCTGCCTTGGAGGCCCAGGATGTGACAGGGCAGCAGGGTaGTACAGGGCACTGGGGCTA +
Preference number: 5 (lower is better)
Translates to: FPPDLLEDPLLCLGGPGCDRAAG*YRALGL
Trigger: TAGCCCCAGTGCCCTGTACAACCCTGCTGCCCTGTC...ACATCCTGGGCCTCCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS GCA 90 bp GGTCTGTTCCAGCTCACATCTCATCTGCATGCAGCACGGACCGGATaGGCCCACTGGGTCTTGGCTTCCCTCCCATCTTCTCAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: GLFQLTSHLHAARTG*AHWVLASLPSSQAV
Trigger: CACTGCTTGAGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCTGGAACAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CCA 90 bp CGAGCCAATGGCACACTACCCTCTCAAGGCCGCCTCTTCCGTAACTaGTCGGAGACAGTTTGGCTGTTCAGGAGAGTCAGGCCAATGGGG +
Preference number: 5 (lower is better)
Translates to: RANGTLPSQGRLFRN*SETVWLFRRVRPMG
Trigger: CCCCATTGGCCTGACTCTCCTGAACAGCCAAACTGTCTCCGACCAGTTACGGAAGAGGCGGCCTTGAGAGGGTAGTGTGCCATTGGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477617.5
CDS CCA 90 bp CAGCTCACATCTCATCTGCATGCAGCACGGACCGGATGCGCCCACTaGGTCTTGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: QLTSHLHAARTGCAH*VLASLPSSQAVSLL
Trigger: CAACAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS-3UTR CAA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAAGACAGGGCAGCAGGGTaGTACAGGGCACTGGGGCTA +
Preference number: 5 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQDRAAG*YRALGL
Trigger: TAGCCCCAGTGCCCTGTACAACCCTGCTGCCCTGTC...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTGGTCAGGAACAGGGTTaGACAGGGCAGCAGGGTTGT +
Preference number: 5 (lower is better)
Translates to: AHQCTPSSAADCPELTACGQEQG*TGQQGC
Trigger: ACAACCCTGCTGCCCTGTCAAACCCTGTTCCTGACC...ACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CAA 90 bp GCCCATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTTTCCTCCTGACCTTCTaGAGGACCCTCTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: AHQCTPSSAADCPELTACFLLTF*RTLSSA
Trigger: GGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAA...ACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CAA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTGCGCCCACTGGGTCTaGGCTTCCCTCCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRCAHWV*ASLPSS
Trigger: AGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS GCA 90 bp GCCTACATTTGGCCCAGTTTCCCCCTGCATCCTCTCCAGGGCCCCTaGCTCATAGACAACCTCATAGAGCATAGGAGAACTGGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: AYIWPSFPLHPLQGP*LIDNLIEHRRTGCP
Trigger: AGGGCAACCAGTTCTCCTATGCTCTATGAGGTTGTCTATGAGGCAGGGGCCCTGGAGAGGATGCAGGGGGAAACTGGGCCAAATGTAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000473340.1
ENST00000479010.1
ENST00000492729.1
CDS-3UTR CAA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTTCAGGCTCACTCTCTaGAAGGCCACAGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRFRLTL*KATATV
Trigger: GACCGTGGCTGTGGCCTTCAAGAGAGTGAGCCTGAA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271889.8
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGACAGGGCAGCAGGGTaGTACAGGGCACTGGGGCTA +
Preference number: 5 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEDRAAG*YRALGL
Trigger: TAGCCCCAGTGCCCTGTACAACCCTGCTGCCCTGTC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAAGACAGGGCAGCAGGGTaGTACAGGGCACTGGGGCTA +
Preference number: 5 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEDRAAG*YRALGL
Trigger: TAGCCCCAGTGCCCTGTACAACCCTGCTGCCCTGTC...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGGGTCAGGAACAGGGTTaGACAGGGCAGCAGGGTTGT +
Preference number: 5 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRGQEQG*TGQQGC
Trigger: ACAACCCTGCTGCCCTGTCAAACCCTGTTCCTGACC...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTTCCTCCTGACCTTCTaGAGGACCCTCTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRFLLTF*RTLSSA
Trigger: GGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS TCA 90 bp ACTGGGTCTTGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTTGTTaGGCCATTTGCATCCTTGGCTCCAGGTGGCTCCCTCAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: TGSWLPSHLLKQCPC*AICILGSRWLPQSG
Trigger: TCCAGACTGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCAAGACCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS TCA 90 bp AGGGCCAGTCCCGAAGGGCCATTTCCCCCTTCCCACAAAGAACACTaGCCTAGCTGGATGGAGATAAGGCCTACATTTGGCCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: RASPEGPFPPSHKEH*PSWMEIRPTFGPVS
Trigger: GGAAACTGGGCCAAATGTAGGCCTTATCTCCATCCAGCTAGGTCAGTGTTCTTTGTGGGAAGGGGGAAATGGCCCTTCGGGACTGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473340.1
ENST00000479010.1
ENST00000492729.1
CDS CCA 90 bp TCTGGAAGTCACTCCGTGAGGCTGGTAATCCTCAGACCCAGCTTCTaGTCGACTCTGGAATGGACTGAAGCTGGGCAGGATGATGAGAGC +
Preference number: 5 (lower is better)
Translates to: SGSHSVRLVILRPSF*STLEWTEAGQDDES
Trigger: GCTCTCATCATCCTGCCCAGCTTCAGTCCATTCCAGAGTCGACCAGAAGCTGGGTCTGAGGATTACCAGCCTCACGGAGTGACTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS-3UTR CAA 90 bp CATCAATGTACTCCTTCTTCCGCCGCCGACTGTCCTGAGCTGACTGCTTGTTACTTCAGGCTCACTCTCTaGAAGGCCACAGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: HQCTPSSAADCPELTACYFRLTL*KATATV
Trigger: GACCGTGGCTGTGGCCTTCAAGAGAGTGAGCCTGAA...GTAACAAGCAGTCAGCTCAGGACAGTCGGCGGCGGAAGAAGGAGTACATTGATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368601.5
CDS-3UTR CAA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATTCAGGCTCACTCTCTaGAAGGCCACAGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQFRLTL*KATATV
Trigger: GACCGTGGCTGTGGCCTTCAAGAGAGTGAGCCTGAA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271889.8
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATTCCTCCTGACCTTCTaGAGGACCCTCTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQFLLTF*RTLSSA
Trigger: GGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTTGCGCCCACTGGGTCTaGGCTTCCCTCCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSCAHWV*ASLPSS
Trigger: AGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCA...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGTGCGCCCACTGGGTCTaGGCTTCCCTCCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: AETKGHLLGCPEVIWTPECAHWV*ASLPSS
Trigger: AGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCA...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAGCCAGCATAGCCCGTaGACCTCCCCAAACACTACA +
Preference number: 5 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRSQHSP*TSPNTT
Trigger: TGTAGTGTTTGGGGAGGTCAACGGGCTATGCTGGCT...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368600.7
ENST00000368603.5
CDS-3UTR CAA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGTTCAGGCTCACTCTCTaGAAGGCCACAGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEFRLTL*KATATV
Trigger: GACCGTGGCTGTGGCCTTCAAGAGAGTGAGCCTGAA...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271889.8
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGTCAGGAACAGGGTTaGACAGGGCAGCAGGGTTGT +
Preference number: 5 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSGQEQG*TGQQGC
Trigger: ACAACCCTGCTGCCCTGTCAAACCCTGTTCCTGACC...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAATTCCTCCTGACCTTCTaGAGGACCCTCTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEFLLTF*RTLSSA
Trigger: GGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAA...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTCCTTGTTGAGCCATTaGCATCCTTGGCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRSLLSH*HPWLQV
Trigger: CACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATCCTTGTTGAGCCATTaGCATCCTTGGCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQSLLSH*HPWLQV
Trigger: CACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS CCA 90 bp GCATCCTTGGCTCCAGGTGGCTCCCTCAGTCTGGACTCTACCACTTaGGTCTCCAGATTTTCTGTTACGTCCTTGTGGGTCAGGATATTT +
Preference number: 5 (lower is better)
Translates to: ASLAPGGSLSLDSTT*VSRFSVTSLWVRIF
Trigger: AAATATCCTGACCCACAAGGACGTAACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAGACTGAGGGAGCCACCTGGAGCCAAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS-3UTR CAA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTCTGGACTCTACCACTaGGGTCTCCAGATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRSGLYH*GLQIFC
Trigger: ACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAGA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAATCCTTGTTGAGCCATTaGCATCCTTGGCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQESLLSH*HPWLQV
Trigger: CACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGA...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTTCCTTGTTGAGCCATTaGCATCCTTGGCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSSLLSH*HPWLQV
Trigger: CACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGA...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGTCTCAAGCAGTGTCCTaGTTGAGCCATTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRSQAVS*LSHLHP
Trigger: AGGATGCAAATGGCTCAACAAGGACACTGCTTGAGA...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS GCA 90 bp ATCAAAGGGCAGCTCACTGACCATGCAGGAATCAGGCACCATAAATaGTGGGCTCCACTGATCTGGAGTAGAAAACAGGTAGCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: IKGQLTDHAGIRHHK*WAPLIWSRKQVAGR
Trigger: TCTCCCAGCTACCTGTTTTCTACTCCAGATCAGTGGAGCCCAGCATTTATGGTGCCTGATTCCTGCATGGTCAGTGAGCTGCCCTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492729.1
CDS CCA 90 bp AAAGGGCAGCTCACTGACCATGCAGGAATCAGGCACCATAAATGCTaGGCTCCACTGATCTGGAGTAGAAAACAGGTAGCTGGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: KGQLTDHAGIRHHKC*APLIWSRKQVAGRK
Trigger: CTTTCTCCCAGCTACCTGTTTTCTACTCCAGATCAGTGGAGCCCAGCATTTATGGTGCCTGATTCCTGCATGGTCAGTGAGCTGCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492729.1
CDS-3UTR CAA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAACAAGCAGTGTCCTTGTaGAGCCATTTGCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQEQAVSL*SHLHPW
Trigger: CCAAGGATGCAAATGGCTCAACAAGGACACTGCTTG...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGCAAGCAGTGTCCTTGTaGAGCCATTTGCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEQAVSL*SHLHPW
Trigger: CCAAGGATGCAAATGGCTCAACAAGGACACTGCTTG...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTCAAGCAGTGTCCTTGTaGAGCCATTTGCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSQAVSL*SHLHPW
Trigger: CCAAGGATGCAAATGGCTCAACAAGGACACTGCTTG...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCATGCGCCCACTGGGTCTaGGCTTCCCTCCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: VFEVPSHICKQMQTRPQACAHWV*ASLPSS
Trigger: AGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCA...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp CTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGACTAAAGGACATCTCTaGGGGTGTCCTGAAGTGATT +
Preference number: 5 (lower is better)
Translates to: LLGCPEVIWTPEGRHLSRTKGHL*GCPEVI
Trigger: AATCACTTCAGGACACCCCAAGAGATGTCCTTTAGT...CCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS TCA 90 bp GCAGGGGTCCTCAGAGATGCCACTGTCACTGCCAGGAGATGCTTCTaGGCAGTACACCTCATTGGGATCAATGAAAAGCTTCAAGAAATC +
Preference number: 5 (lower is better)
Translates to: AGVLRDATVTARRCF*AVHLIGINEKLQEI
Trigger: GATTTCTTGAAGCTTTTCATTGATCCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGCAGTGACAGTGGCATCTCTGAGGACCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000473340.1
ENST00000479010.1
ENST00000492729.1
CDS-3UTR CAA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAGGTCAGGAACAGGGTTaGACAGGGCAGCAGGGTTGT +
Preference number: 5 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAGQEQG*TGQQGC
Trigger: ACAACCCTGCTGCCCTGTCAAACCCTGTTCCTGACC...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTTCTGGACTCTACCACTaGGGTCTCCAGATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSSGLYH*GLQIFC
Trigger: ACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAGA...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAATCTGGACTCTACCACTaGGGTCTCCAGATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQESGLYH*GLQIFC
Trigger: ACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAGA...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGTCTCAAGCAGTGTCCTaGTTGAGCCATTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: AETKGHLLGCPEVIWTPESQAVS*LSHLHP
Trigger: AGGATGCAAATGGCTCAACAAGGACACTGCTTGAGA...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp AGCAAAGCCATAAGGAAGCCCAGGATTCCTTGTGATCAGGAAGTGGGCCAGGAATCTCAAGCAGTGTCCTaGTTGAGCCATTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: SKAIRKPRIPCDQEVGQESQAVS*LSHLHP
Trigger: AGGATGCAAATGGCTCAACAAGGACACTGCTTGAGA...TTCCTGGCCCACTTCCTGATCACAAGGAATCCTGGGCTTCCTTATGGCTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCATTCAGGCTCACTCTCTaGAAGGCCCGGAACCTCTGG +
Preference number: 5 (lower is better)
Translates to: VFEVPSHICKQMQTRPQAFRLTL*KARNLW
Trigger: CCAGAGGTTCCGGGCCTTCAAGAGAGTGAGCCTGAA...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368600.7
CDS TCA 90 bp CACTGCCAGGAGATGCTTCTGAGCAGTACACCTCATTGGGATCAATaGAAAGCTTCAAGAAATCTTCAGGCTCACTCTCTTGAAGGCCCG +
Preference number: 5 (lower is better)
Translates to: HCQEMLLSSTPHWDQ*KASRNLQAHSLEGP
Trigger: CGGGCCTTCAAGAGAGTGAGCCTGAAGATTTCTTGAAGCTTTTCATTGATCCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368600.7
ENST00000449724.5
ENST00000461688.5
ENST00000492729.1
CDS-3UTR CAA 90 bp GCAGAGACTAAAGGACATCTCTTGGGGTGTCCTGAAGTGATTTGGACCCCTGAGGAGCAGTACACCTCATaGGGATCAATGAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: AETKGHLLGCPEVIWTPEEQYTS*GSMKSF
Trigger: GAAGCTTTTCATTGATCCCAATGAGGTGTACTGCTC...CTCAGGGGTCCAAATCACTTCAGGACACCCCAAGAGATGTCCTTTAGTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGGGTCAGGAACAGGGTTaGACAGGGCAGCAGGGTTGT +
Preference number: 5 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRGQEQG*TGQQGC
Trigger: ACAACCCTGCTGCCCTGTCAAACCCTGTTCCTGACC...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTGGGAAGCAATTTTCTGTTACGTCCTaGTGGGTCAGGATATTTCTG +
Preference number: 5 (lower is better)
Translates to: VIWTPEGRHLSRNPSGKQFSVTS*WVRIFL
Trigger: CAGAAATATCCTGACCCACAAGGACGTAACAGAAAA...TTGCTTCCCACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAAGCCAGCATAGCCCGTaGACCTCCCCAAACACTACA +
Preference number: 5 (lower is better)
Translates to: VFEVPSHICKQMQTRPQASQHSP*TSPNTT
Trigger: TGTAGTGTTTGGGGAGGTCAACGGGCTATGCTGGCT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368600.7
ENST00000368603.5
CDS TCA 90 bp CACTGCCAGGAGATGCTTCTGAGCAGTACACCTCATTGGGATCAATaGAAAGCTTCAAGAAATCTTCAGGCTCACTCTCTTGAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: HCQEMLLSSTPHWDQ*KASRNLQAHSLEGH
Trigger: GTGGCCTTCAAGAGAGTGAGCCTGAAGATTTCTTGAAGCTTTTCATTGATCCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271889.8
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000479010.1
CDS TCA 90 bp CACTGCCAGGAGATGCTTCTGAGCAGTACACCTCATTGGGATCAATaGAAAGCTTCAAGAAATCTTCAGGCTCACTCTCTTGAAGGCCCT +
Preference number: 5 (lower is better)
Translates to: HCQEMLLSSTPHWDQ*KASRNLQAHSLEGP
Trigger: AGGGCCTTCAAGAGAGTGAGCCTGAAGATTTCTTGAAGCTTTTCATTGATCCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473340.1
CDS-3UTR CAA 90 bp TGTCCTGAAGTGATTTGGACCCCTGAGGGCAGACACCTAAGTAGGAATCCCAGTTTTTCTGTTACGTCCTaGTGGGTCAGGATATTTCTG +
Preference number: 5 (lower is better)
Translates to: CPEVIWTPEGRHLSRNPSFSVTS*WVRIFL
Trigger: CAGAAATATCCTGACCCACAAGGACGTAACAGAAAA...ACTGGGATTCCTACTTAGGTGTCTGCCCTCAGGGGTCCAAATCACTTCAGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGTCTGGACTCTACCACTaGGGTCTCCAGATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRSGLYH*GLQIFC
Trigger: ACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAGA...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGTCTCAAGCAGTGTCCTaGTTGAGCCATTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRSQAVS*LSHLHP
Trigger: AGGATGCAAATGGCTCAACAAGGACACTGCTTGAGA...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp GTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGCAACTAAAGGACATCTCTaGGGGTGTCCTGAAGTGATT +
Preference number: 5 (lower is better)
Translates to: VFEVPSHICKQMQTRPQATKGHL*GCPEVI
Trigger: AATCACTTCAGGACACCCCAAGAGATGTCCTTTAGT...TGCCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS-3UTR CAA 90 bp AAGTATTTGAGGTACCCTCTCATATATGCAAACAAATGCAGACTAGGCCTCAGGTTTTCTGTTACGTCCTaGTGGGTCAGGATATTTCTG +
Preference number: 5 (lower is better)
Translates to: KYLRYPLIYANKCRLGLRFSVTS*WVRIFL
Trigger: CAGAAATATCCTGACCCACAAGGACGTAACAGAAAA...CCTGAGGCCTAGTCTGCATTTGTTTGCATATATGAGAGGGTACCTCAAATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
CDS TCA 90 bp TTGGGATCAATGAAAAGCTTCAAGAAATCTTCAGGCTCACTCTCTTaGAGGCCCTACAGTAGGAAAAGGTTATATATATGTGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LGSMKSFKKSSGSLS*RPYSRKRLYICAGK
Trigger: CTTCCCTGCACATATATATAACCTTTTCCTACTGTAGGGCCTTCAAGAGAGTGAGCCTGAAGATTTCTTGAAGCTTTTCATTGATCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473340.1
CDS CCA 72 bp CAGGGTTTGACAGGGCAGCAGGGTTGTACAGGGCACTaGGGCTACGGTGCCTGCTCTGGGCAGGATGTGGGC +
Preference number: 6 (lower is better)
Translates to: QGLTGQQGCTGH*GYGACSGQDVG
Trigger: GCCCACATCCTGCCCAGAGCAGGCACCGTAGCCCCAGTGCCCTGTACAACCCTGCTGCCCTGTCAAACCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000449724.5
ENST00000468845.1
ENST00000492729.1
CDS GCA 72 bp AGGCCACAGCCACGGTCCCCACCGGACTTCCAGCCTTaGAGTCCCTGTTCCTGTAGCCTAGTTACCGGAACC +
Preference number: 6 (lower is better)
Translates to: RPQPRSPPDFQP*SPCSCSLVTGT
Trigger: GGTTCCGGTAACTAGGCTACAGGAACAGGGACTGCAAGGCTGGAAGTCCGGTGGGGACCGTGGCTGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271889.8
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000477617.5
ENST00000479010.1
CDS GCA 72 bp AGGGCAGCAGGGTTGTACAGGGCACTGGGGCTACGGTaGCTGCTCTGGGCAGGATGTGGGCATGAGCATCAA +
Preference number: 6 (lower is better)
Translates to: RAAGLYRALGLR*LLWAGCGHEHQ
Trigger: TTGATGCTCATGCCCACATCCTGCCCAGAGCAGGCACCGTAGCCCCAGTGCCCTGTACAACCCTGCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000449724.5
ENST00000492729.1
CDS CCA 72 bp CAGCTCCAGGACGGATCCTGTCGAGAAGATATCCTCTaGGGGCTCCAGCCACGCGTCCAGCAGGTCAGGGAT +
Preference number: 6 (lower is better)
Translates to: QLQDGSCREDIL*GLQPRVQQVRD
Trigger: ATCCCTGACCTGCTGGACGCGTGGCTGGAGCCCCCAGAGGATATCTTCTCGACAGGATCCGTCCTGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000473340.1
ENST00000477617.5
ENST00000479010.1
ENST00000492729.1
CDS GCA 72 bp CCAGGAAGGTCTGTTCCAGCTCACATCTCATCTGCATaGAGCACGGACCGGATGCGCCCACTGGGTCTTGGC +
Preference number: 6 (lower is better)
Translates to: PGRSVPAHISSA*STDRMRPLGLG
Trigger: GCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCTGGAACAGACCTTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS GCA 72 bp TGGGCCAGGAAGGTCTGTTCCAGCTCACATCTCATCTaGATGCAGCACGGACCGGATGCGCCCACTGGGTCT +
Preference number: 6 (lower is better)
Translates to: WARKVCSSSHLI*MQHGPDAPTGS
Trigger: AGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCTGGAACAGACCTTCCTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS GCA 72 bp CTCACACAGCCACGGTCCCCACCGGACTTCCAGCCTTaGAGTCCCTGTTCCTGTAGCCTAGTTACCGGAACC +
Preference number: 6 (lower is better)
Translates to: LTQPRSPPDFQP*SPCSCSLVTGT
Trigger: GGTTCCGGTAACTAGGCTACAGGAACAGGGACTGCAAGGCTGGAAGTCCGGTGGGGACCGTGGCTGTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473340.1
CDS CAA 72 bp CTGCATGCAGCACGGACCGGATGCGCCCACTGGGTCTaGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LHAARTGCAHWV*ASLPSSQAVSL
Trigger: CAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS TCA 72 bp CGCCCACCGCGTGGCGCTCTTCCCAAAGCTGAGTCCTaGTTGGAAGCTGAAGACTTAGGTTTCGGAGGGGCA +
Preference number: 6 (lower is better)
Translates to: RPPRGALPKAES*LEAEDLGFGGA
Trigger: TGCCCCTCCGAAACCTAAGTCTTCAGCTTCCAATCAGGACTCAGCTTTGGGAAGAGCGCCACGCGGTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477617.5
CDS GCA 72 bp CAGCTCACATCTCATCTGCATGCAGCACGGACCGGATaGGCCCACTGGGTCTTGGCTTCCCTCCCATCTTCT +
Preference number: 6 (lower is better)
Translates to: QLTSHLHAARTG*AHWVLASLPSS
Trigger: AGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CCA 72 bp TCTCATCTGCATGCAGCACGGACCGGATGCGCCCACTaGGTCTTGGCTTCCCTCCCATCTTCTCAAGCAGTG +
Preference number: 6 (lower is better)
Translates to: SHLHAARTGCAH*VLASLPSSQAV
Trigger: CACTGCTTGAGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAGATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CAA 90 bp GCCCACTGGGTCTTGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTaGTTGAGCCATTTGCATCCTTGGCTCCAGGTGGCTCCCTCAGTC +
Preference number: 6 (lower is better)
Translates to: AHWVLASLPSSQAVS*LSHLHPWLQVAPSV
Trigger: GACTGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCAAGACCCAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CCA 72 bp GGCACACTACCCTCTCAAGGCCGCCTCTTCCGTAACTaGTCGGAGACAGTTTGGCTGTTCAGGAGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: GTLPSQGRLFRN*SETVWLFRRVR
Trigger: CCTGACTCTCCTGAACAGCCAAACTGTCTCCGACCAGTTACGGAAGAGGCGGCCTTGAGAGGGTAGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477617.5
CDS CAA 90 bp TCAGGGATTCCGAGATCCATGCTTACTACAAAAGTGGATGCCACCTaGCCAGGAGCCACGGTAGGGCCGCTGTATCTGGGAGTAGGGGAC +
Preference number: 6 (lower is better)
Translates to: SGIPRSMLTTKVDAT*PGATVGPLYLGVGD
Trigger: GTCCCCTACTCCCAGATACAGCGGCCCTACCGTGGCTCCTGGCAAGGTGGCATCCACTTTTGTAGTAAGCATGGATCTCGGAATCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000449724.5
CDS CAA 90 bp CACTGGGTCTTGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTTGTaGAGCCATTTGCATCCTTGGCTCCAGGTGGCTCCCTCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: HWVLASLPSSQAVSL*SHLHPWLQVAPSVW
Trigger: CCAGACTGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCAAGACCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CAA 90 bp ACATCTCATCTGCATGCAGCACGGACCGGATGCGCCCACTGGGTCTaGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTTGTTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: TSHLHAARTGCAHWV*ASLPSSQAVSLLSH
Trigger: ATGGCTCAACAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAGATGAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS GCA 72 bp CTGGATGGCAGGGGTCCTCAGAGATGCCACTGTCACTaGCAGGAGATGCTTCTGAGCAGTACACCTCATTGG +
Preference number: 6 (lower is better)
Translates to: LDGRGPQRCHCH*QEMLLSSTPHW
Trigger: CCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGCAGTGACAGTGGCATCTCTGAGGACCCCTGCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000473340.1
ENST00000479010.1
ENST00000492729.1
CDS GCA 72 bp TGGCCCAGTTTCCCCCTGCATCCTCTCCAGGGCCCCTaGCTCATAGACAACCTCATAGAGCATAGGAGAACT +
Preference number: 6 (lower is better)
Translates to: WPSFPLHPLQGP*LIDNLIEHRRT
Trigger: AGTTCTCCTATGCTCTATGAGGTTGTCTATGAGGCAGGGGCCCTGGAGAGGATGCAGGGGGAAACTGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000473340.1
ENST00000479010.1
ENST00000492729.1
CDS CCA 72 bp CACTCCGTGAGGCTGGTAATCCTCAGACCCAGCTTCTaGTCGACTCTGGAATGGACTGAAGCTGGGCAGGAT +
Preference number: 6 (lower is better)
Translates to: HSVRLVILRPSF*STLEWTEAGQD
Trigger: ATCCTGCCCAGCTTCAGTCCATTCCAGAGTCGACCAGAAGCTGGGTCTGAGGATTACCAGCCTCACGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CAA 72 bp CCGAGATCCATGCTTACTACAAAAGTGGATGCCACCTaGCCAGGAGCCACGGTAGGGCCGCTGTATCTGGGA +
Preference number: 6 (lower is better)
Translates to: PRSMLTTKVDAT*PGATVGPLYLG
Trigger: TCCCAGATACAGCGGCCCTACCGTGGCTCCTGGCAAGGTGGCATCCACTTTTGTAGTAAGCATGGATCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271889.8
ENST00000449724.5
CDS TCA 72 bp TGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTTGTTaGGCCATTTGCATCCTTGGCTCCAGGTGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: WLPSHLLKQCPC*AICILGSRWLP
Trigger: AGGGAGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CCA 72 bp GCTCCAGGTGGCTCCCTCAGTCTGGACTCTACCACTTaGGTCTCCAGATTTTCTGTTACGTCCTTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: APGGSLSLDSTT*VSRFSVTSLWV
Trigger: GACCCACAAGGACGTAACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAGACTGAGGGAGCCACCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CAA 72 bp GGCTCCAGGTGGCTCCCTCAGTCTGGACTCTACCACTaGGGTCTCCAGATTTTCTGTTACGTCCTTGTGGGT +
Preference number: 6 (lower is better)
Translates to: GSRWLPQSGLYH*GLQIFCYVLVG
Trigger: ACCCACAAGGACGTAACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAGACTGAGGGAGCCACCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CAA 72 bp CTCCCATCTTCTCAAGCAGTGTCCTTGTTGAGCCATTaGCATCCTTGGCTCCAGGTGGCTCCCTCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: LPSSQAVSLLSH*HPWLQVAPSVW
Trigger: CCAGACTGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTGAGAAGATGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CAA 72 bp TTGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTTGTaGAGCCATTTGCATCCTTGGCTCCAGGTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: LASLPSSQAVSL*SHLHPWLQVAP
Trigger: GGGAGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CAA 90 bp TTGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTTGTTGAGCCATTaGCATCCTTGGCTCCAGGTGGCTCCCTCAGTCTGGACTCTACCA +
Preference number: 6 (lower is better)
Translates to: LASLPSSQAVSLLSH*HPWLQVAPSVWTLP
Trigger: TGGTAGAGTCCAGACTGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS TCA 72 bp CCCGAAGGGCCATTTCCCCCTTCCCACAAAGAACACTaGCCTAGCTGGATGGAGATAAGGCCTACATTTGGC +
Preference number: 6 (lower is better)
Translates to: PEGPFPPSHKEH*PSWMEIRPTFG
Trigger: GCCAAATGTAGGCCTTATCTCCATCCAGCTAGGTCAGTGTTCTTTGTGGGAAGGGGGAAATGGCCCTTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473340.1
ENST00000479010.1
ENST00000492729.1
CDS CCA 72 bp TCTCAAGCAGTGTCCTTGTTGAGCCATTTGCATCCTTaGCTCCAGGTGGCTCCCTCAGTCTGGACTCTACCA +
Preference number: 6 (lower is better)
Translates to: SQAVSLLSHLHP*LQVAPSVWTLP
Trigger: TGGTAGAGTCCAGACTGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CAA 72 bp GTCTTGGCTTCCCTCCCATCTTCTCAAGCAGTGTCCTaGTTGAGCCATTTGCATCCTTGGCTCCAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: VLASLPSSQAVS*LSHLHPWLQVA
Trigger: AGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTGAGAAGATGGGAGGGAAGCCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CAA 90 bp TGCATCCTTGGCTCCAGGTGGCTCCCTCAGTCTGGACTCTACCACTaGGGTCTCCAGATTTTCTGTTACGTCCTTGTGGGTCAGGATATT +
Preference number: 6 (lower is better)
Translates to: CILGSRWLPQSGLYH*GLQIFCYVLVGQDI
Trigger: AATATCCTGACCCACAAGGACGTAACAGAAAATCTGGAGACCCAAGTGGTAGAGTCCAGACTGAGGGAGCCACCTGGAGCCAAGGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS GCA 72 bp CAGCTCACTGACCATGCAGGAATCAGGCACCATAAATaGTGGGCTCCACTGATCTGGAGTAGAAAACAGGTA +
Preference number: 6 (lower is better)
Translates to: QLTDHAGIRHHK*WAPLIWSRKQV
Trigger: TACCTGTTTTCTACTCCAGATCAGTGGAGCCCAGCATTTATGGTGCCTGATTCCTGCATGGTCAGTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492729.1
CDS CCA 72 bp GAATCAAAACACAAGTGCTGGTCTGGGCAGCTTTGTTaGAAGTTTGAGCAATTAGCGTCTGCAGCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: ESKHKCWSGQLC*KFEQLASAAGG
Trigger: TCCGCCAGCTGCAGACGCTAATTGCTCAAACTTCCAACAAAGCTGCCCAGACCAGCACTTGTGTTTTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368603.5
ENST00000368607.8
ENST00000468845.1
CDS CCA 72 bp CTCACTGACCATGCAGGAATCAGGCACCATAAATGCTaGGCTCCACTGATCTGGAGTAGAAAACAGGTAGCT +
Preference number: 6 (lower is better)
Translates to: LTDHAGIRHHKC*APLIWSRKQVA
Trigger: AGCTACCTGTTTTCTACTCCAGATCAGTGGAGCCCAGCATTTATGGTGCCTGATTCCTGCATGGTCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492729.1
CDS TCA 72 bp CTCAGAGATGCCACTGTCACTGCCAGGAGATGCTTCTaGGCAGTACACCTCATTGGGATCAATGAAAAGCTT +
Preference number: 6 (lower is better)
Translates to: LRDATVTARRCF*AVHLIGINEKL
Trigger: AAGCTTTTCATTGATCCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGCAGTGACAGTGGCATCTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000473340.1
ENST00000479010.1
ENST00000492729.1
CDS CAA 90 bp ATGCCACTGTCACTGCCAGGAGATGCTTCTGAGCAGTACACCTCATaGGGATCAATGAAAAGCTTCAAGAAATCTTCAGGCTCACTCTCT +
Preference number: 6 (lower is better)
Translates to: MPLSLPGDASEQYTS*GSMKSFKKSSGSLS
Trigger: AGAGAGTGAGCCTGAAGATTTCTTGAAGCTTTTCATTGATCCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGCAGTGACAGTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000473340.1
ENST00000479010.1
ENST00000492729.1
CDS CAA 90 bp CACTTCTTGGGCATGGAGACAGTTATTATACAACTTACGTCTATTTaGGGGGTGGTCTGTTTTCAGACCTGTCTCCAAGTGGGAGCTGAA +
Preference number: 6 (lower is better)
Translates to: HFLGMETVIIQLTSI*GVVCFQTCLQVGAE
Trigger: TTCAGCTCCCACTTGGAGACAGGTCTGAAAACAGACCACCCCCAAAATAGACGTAAGTTGTATAATAACTGTCTCCATGCCCAAGAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473340.1
CDS CAA 72 bp TCACTGCCAGGAGATGCTTCTGAGCAGTACACCTCATaGGGATCAATGAAAAGCTTCAAGAAATCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: SLPGDASEQYTS*GSMKSFKKSSG
Trigger: GCCTGAAGATTTCTTGAAGCTTTTCATTGATCCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000271889.8
ENST00000368600.7
ENST00000368601.5
ENST00000368603.5
ENST00000368607.8
ENST00000431292.1
ENST00000449724.5
ENST00000461688.5
ENST00000473340.1
ENST00000479010.1
ENST00000492729.1
CDS CAA 72 bp GGCATGGAGACAGTTATTATACAACTTACGTCTATTTaGGGGGTGGTCTGTTTTCAGACCTGTCTCCAAGTG +
Preference number: 6 (lower is better)
Translates to: GMETVIIQLTSI*GVVCFQTCLQV
Trigger: CACTTGGAGACAGGTCTGAAAACAGACCACCCCCAAAATAGACGTAAGTTGTATAATAACTGTCTCCATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473340.1
CDS CAA 90 bp GGCCCTACAGTAGGAAAAGGTTATATATATGTGCAGGGAAGAATTTaGGAAGTCCTCCCTGACTTATGCTTCATTTTCAGTCCTTTCACT +
Preference number: 6 (lower is better)
Translates to: GPTVGKGYIYVQGRI*EVLPDLCFIFSPFT
Trigger: AGTGAAAGGACTGAAAATGAAGCATAAGTCAGGGAGGACTTCCAAAATTCTTCCCTGCACATATATATAACCTTTTCCTACTGTAGGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473340.1
CDS TCA 72 bp ATGAAAAGCTTCAAGAAATCTTCAGGCTCACTCTCTTaGAGGCCCTACAGTAGGAAAAGGTTATATATATGT +
Preference number: 6 (lower is better)
Translates to: MKSFKKSSGSLS*RPYSRKRLYIC
Trigger: ACATATATATAACCTTTTCCTACTGTAGGGCCTTCAAGAGAGTGAGCCTGAAGATTTCTTGAAGCTTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473340.1